Carg07153 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07153
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBZIP domain-containing protein
LocationCarg_Chr17: 8036596 .. 8038956 (-)
RNA-Seq ExpressionCarg07153
SyntenyCarg07153
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATCAAAGAAATTAGTGGGGAAATACTCTAATGTCTCCAAGCTTTTCGATAGTAAAAGTGATTTTTCCTTCTCCTCCTGCCCAGATAAAGCCAAAATAATTCAGTCAGGTAAAAGAAAAGAGAAGGAACTGCTAAACTTGCATATGCTCCTACCTCCAATTTCATCATCTTTTTTTTCTGCGACTTGCTCAACTTTGGTTTTTTATTTATCTGAGTGCCTTTACATCCCTGTACATGAAAAGTTTTGATCTCAAAATTTTATAAAATATATGAAAATGGCAACATTGTCACATTACCTTATTCATGTTTTTTCTCTTCTTATCGCTCTTTTTACTCCCATACAAGATGACTTGATTGCTACCACCACCATCCATACTACCAAATATAATGAAAATAAAGGCTTTTGAAGTAAACTATAGATAGGAACCCATAATCAAAATTCAAATAATGTTAAAAAAAAAAGTTTTTCTTCCTATAAAAATTAGTAACAAAGAAATTTCTTATACCTCCATGAACCTTTCCCACAATCTAGCTGATCATTGACAAGGTCTTCCATTTAGTACACTGCACAAAAATGACCAAACTTCAAATGATGAATATAAGGTTAAAGGAAAGATCATGGCCAAAGAAATCATGTTAACATAAGAACCTTACAAAAAGTAGATACTGAAATTGACAATAACAACAGTGATAAATAAAGTAAAGAGAGCAAGCATATAGACTAAAGTAACTAGAATTTCTATTTGTGGTTTCTTGAGGTTGCGGGAGTTTCTCTAGAAATGGAGTCGTGCATTTCCTTGAGCCCCTCATTCACAATCATGATGTGCCCACATCATGTGTAGTAATTCTCCATCTAAGACAAGTTTTAAGTCTTTTCATAATATACAATACAGCCACATCAGTGGAACTTGCATTATCAATTATGTGACTATTATGTAGTTAATGTTTTGCAATGAAGCCTACGTGTCAGTTGTAAGACAAACCCTCTTGGAATTACTAACTAAAAAAGATTTTAACTTCTTTTTCTATTCAAAATAAAGTTGAAATATGTCTCTAGCAATGGTTACTCTTGATGAATGGTCAAATCTATGACATGTAGTACTGCAAAACAATCTAAAACTCTCCTTCTCTACGAATTCGAATAGCAACTCATCAATAATTATCATCTTAGCATATGTTGCTCTACATGTTGTTTGACTAAATAATGAAGTTTCAAAATTACTACCACACTTCCCATCTAATGAAGATTTAAAGCTTAAAGTGGTTAGTCATTTGTCTTCCATCTTATATGGGTACTTTCTACACTAATTTTTTAAGTGTTTTTAACGTGCTAGTTCCACCAGAAGTAGCATCACAAGCATACTCTTTATCACAATAATTATACTTGCACCTCATCTTGTTATTCTCTAATCTAGTGAAATGATCCATAATGTAGAGGTTGATTTATTAGGTCTCTTCTTCCAAGATTCAAATTGTATAGGCAATGGTGGCTTAGTTGCATTACAATTACTAGAACCAGAAGGAGTTTCAGATTTACATGCACTTGCACTATTGCTTTCCATTTATAAAAAGTAAAATGAAACTAAACTCAAACAGAGAAAATAATCTCCAACTCCAAATGATCCATACAAACCCAAAAAAGTTATTTCTGGAAAGAAGGATTCAAAAGAGATGTATTTTCTGCAAGTTAAGAGGTTTGGATACAAGTCTGATGCAAGTTTGTGCAGTATTCCCTATGCTTGGAGGAATACAGTAAATGTGGCCTGTAATTCCCACCTACCCAATCAAATTTTTACTCCAAACAAAATAGGAACAAGAAATCTTCTCATGCATCTCATTCTATACATCGAACCAATTGAATGAGTTTCAAAGGTGTTTATTTAACTGTATTTGAGATTTCCCCAGCCCCATGCCATGCAGTAAACCCAAGTTGAGCAATTTAAACGTGCAGAGAGAGAGACACACATACACACACCTGAAAGCTGCAATTATACAAGTCTTTTAGTGAAGTTGGAGGTAAGCGCGAGACGGAAGGAACTTCAGATAGGTCAATCGTGCAATTATACACGTCTTTCAGTCTATCGTGCGGTGACGGCGTGCGGCTAGGTAAGACTGAATCGATGAACAGTCTTTTAAGAGTTAAAGCAATTGAAACGACGAACCAGTTCAGAGCCCTAAATTCGGTGATTCAATTCGTCGACGATGCGAATGCTCTTGCGGTTGATGTTGGTAATCCTCTGTTGGAACCTTGGCAACTCAACCTGCAAATGCAGCCGTTGGCGGCGGATTACGAAAAACTAACTTTCCCCGGCATCACTGGATTTTGTAAACCCTTCCAAATACCTGATTTTTTTTAA

mRNA sequence

ATGTTATCAAAGAAATTAGTGGGGAAATACTCTAATGTCTCCAAGCTTTTCGATAGTAAAAGTGATTTTTCCTTCTCCTCCTGCCCAGATAAAGCCAAAATAATTCAGTCAGTTGGAGGTAAGCGCGAGACGGAAGGAACTTCAGATAGGTCAATCGTGCAATTATACACGTCTTTCAGTCTATCGTGCGGTGACGGCGTGCGGCTAGGTAAGACTGAATCGATGAACAGTCTTTTAAGAGTTAAAGCAATTGAAACGACGAACCAGTTCAGAGCCCTAAATTCGGTGATTCAATTCGTCGACGATGCGAATGCTCTTGCGGTTGATGTTGGTAATCCTCTGTTGGAACCTTGGCAACTCAACCTGCAAATGCAGCCGTTGGCGGCGGATTACGAAAAACTAACTTTCCCCGGCATCACTGGATTTTGTAAACCCTTCCAAATACCTGATTTTTTTTAA

Coding sequence (CDS)

ATGTTATCAAAGAAATTAGTGGGGAAATACTCTAATGTCTCCAAGCTTTTCGATAGTAAAAGTGATTTTTCCTTCTCCTCCTGCCCAGATAAAGCCAAAATAATTCAGTCAGTTGGAGGTAAGCGCGAGACGGAAGGAACTTCAGATAGGTCAATCGTGCAATTATACACGTCTTTCAGTCTATCGTGCGGTGACGGCGTGCGGCTAGGTAAGACTGAATCGATGAACAGTCTTTTAAGAGTTAAAGCAATTGAAACGACGAACCAGTTCAGAGCCCTAAATTCGGTGATTCAATTCGTCGACGATGCGAATGCTCTTGCGGTTGATGTTGGTAATCCTCTGTTGGAACCTTGGCAACTCAACCTGCAAATGCAGCCGTTGGCGGCGGATTACGAAAAACTAACTTTCCCCGGCATCACTGGATTTTGTAAACCCTTCCAAATACCTGATTTTTTTTAA

Protein sequence

MLSKKLVGKYSNVSKLFDSKSDFSFSSCPDKAKIIQSVGGKRETEGTSDRSIVQLYTSFSLSCGDGVRLGKTESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVDVGNPLLEPWQLNLQMQPLAADYEKLTFPGITGFCKPFQIPDFF
Homology
[Close]
BLAST of Carg07153 vs. NCBI nr
Match: KAG7014344.1 (hypothetical protein SDJN02_24521, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.3 bits (778), Expect = 5.9e-79
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MLSKKLVGKYSNVSKLFDSKSDFSFSSCPDKAKIIQSVGGKRETEGTSDRSIVQLYTSFS 60
           MLSKKLVGKYSNVSKLFDSKSDFSFSSCPDKAKIIQSVGGKRETEGTSDRSIVQLYTSFS
Sbjct: 1   MLSKKLVGKYSNVSKLFDSKSDFSFSSCPDKAKIIQSVGGKRETEGTSDRSIVQLYTSFS 60

Query: 61  LSCGDGVRLGKTESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVDVGNPLLEPWQL 120
           LSCGDGVRLGKTESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVDVGNPLLEPWQL
Sbjct: 61  LSCGDGVRLGKTESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVDVGNPLLEPWQL 120

Query: 121 NLQMQPLAADYEKLTFPGITGFCKPFQIPDFF 153
           NLQMQPLAADYEKLTFPGITGFCKPFQIPDFF
Sbjct: 121 NLQMQPLAADYEKLTFPGITGFCKPFQIPDFF 152

[Close]
BLAST of Carg07153 vs. NCBI nr
Match: XP_008451653.1 (PREDICTED: bZIP transcription factor 53-like [Cucumis melo] >KAA0046693.1 bZIP transcription factor 53-like [Cucumis melo var. makuwa] >TYK18229.1 bZIP transcription factor 53-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0 

Query: 41  KRETEGTSDRSIVQLYTSFSLSCGDG--VRLGKTESMNSLLRVKAIETTNQFRALNSVIQ 100
           KR  + TS+   +Q+  S  +   +G    + + ESMN+ LRV+AIE T + RAL+ V+Q
Sbjct: 28  KRFEDLTSEVRELQIVNSRIVESVNGREEAMVEIESMNNFLRVEAIEMTCRLRALDLVLQ 87

Query: 101 FVDDANALAVDVGNPLLEPWQLNLQMQP----LAADY 132
             DDANA+A DV +PLLEPWQLN Q QP    +AADY
Sbjct: 88  IQDDANAVAFDVRDPLLEPWQLNQQKQPPPPLMAADY 124

[Close]
BLAST of Carg07153 vs. NCBI nr
Match: XP_038900030.1 (bZIP transcription factor 53-like [Benincasa hispida])

HSP 1 Score: 72.4 bits (176), Expect = 3.8e-09
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0 

Query: 73  ESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVDVGNPLLEPWQLNLQMQ-PLAADY 132
           ES+N++LRV+A+E T +  AL+ V+Q VDDA+AL VDV +PLLEPWQ N QM  P AADY
Sbjct: 76  ESINNILRVEAMEMTYRLGALDLVLQIVDDADALGVDVRDPLLEPWQHNQQMPLPTAADY 135

[Close]
BLAST of Carg07153 vs. NCBI nr
Match: KGN45565.2 (hypothetical protein Csa_016340 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 3.2e-08
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 73  ESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVDVGNPLLEPWQLNLQMQP----LA 132
           ESMN+ LRV+AIE T + RAL+ ++Q  DDAN + VDV +P LEPWQLN Q QP    +A
Sbjct: 121 ESMNNFLRVEAIEMTCRLRALDLMLQIQDDANVVVVDVRDPWLEPWQLNQQSQPPPPLMA 180

[Close]
BLAST of Carg07153 vs. NCBI nr
Match: PON72394.1 (Basic-leucine zipper transcription factor [Trema orientale])

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-06
Identity = 30/62 (48.39%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 71  KTESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVD---VGNPLLEPWQLNLQMQPL 130
           + ES N+++R +A+E T++ R+LNSV+Q V+D + LAVD   + +PLL+PWQL   +QP+
Sbjct: 75  QVESTNNVMRAQAMELTDRLRSLNSVLQIVEDVSGLAVDIPEIPDPLLKPWQLAYPIQPI 134

[Close]
BLAST of Carg07153 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.7e-05
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0 

Query: 73  ESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVD---VGNPLLEPWQLNLQMQPLAA 130
           ES N++LR +A E T++ R+LNSV++ V++ +  A+D   +   +  PWQ+   MQP+ A
Sbjct: 80  ESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPEIPESMQNPWQMPCPMQPIRA 139

[Close]
BLAST of Carg07153 vs. ExPASy TrEMBL
Match: A0A5D3D3X1 (BZIP transcription factor 53-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001690 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 7.4e-11
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0 

Query: 41  KRETEGTSDRSIVQLYTSFSLSCGDG--VRLGKTESMNSLLRVKAIETTNQFRALNSVIQ 100
           KR  + TS+   +Q+  S  +   +G    + + ESMN+ LRV+AIE T + RAL+ V+Q
Sbjct: 28  KRFEDLTSEVRELQIVNSRIVESVNGREEAMVEIESMNNFLRVEAIEMTCRLRALDLVLQ 87

Query: 101 FVDDANALAVDVGNPLLEPWQLNLQMQP----LAADY 132
             DDANA+A DV +PLLEPWQLN Q QP    +AADY
Sbjct: 88  IQDDANAVAFDVRDPLLEPWQLNQQKQPPPPLMAADY 124

[Close]
BLAST of Carg07153 vs. ExPASy TrEMBL
Match: A0A1S3BS27 (bZIP transcription factor 53-like OS=Cucumis melo OX=3656 GN=LOC103492885 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 7.4e-11
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0 

Query: 41  KRETEGTSDRSIVQLYTSFSLSCGDG--VRLGKTESMNSLLRVKAIETTNQFRALNSVIQ 100
           KR  + TS+   +Q+  S  +   +G    + + ESMN+ LRV+AIE T + RAL+ V+Q
Sbjct: 28  KRFEDLTSEVRELQIVNSRIVESVNGREEAMVEIESMNNFLRVEAIEMTCRLRALDLVLQ 87

Query: 101 FVDDANALAVDVGNPLLEPWQLNLQMQP----LAADY 132
             DDANA+A DV +PLLEPWQLN Q QP    +AADY
Sbjct: 88  IQDDANAVAFDVRDPLLEPWQLNQQKQPPPPLMAADY 124

[Close]
BLAST of Carg07153 vs. ExPASy TrEMBL
Match: A0A0A0K6D0 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407660 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-08
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 73  ESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVDVGNPLLEPWQLNLQMQP----LA 132
           ESMN+ LRV+AIE T + RAL+ ++Q  DDAN + VDV +P LEPWQLN Q QP    +A
Sbjct: 167 ESMNNFLRVEAIEMTCRLRALDLMLQIQDDANVVVVDVRDPWLEPWQLNQQSQPPPPLMA 226

[Close]
BLAST of Carg07153 vs. ExPASy TrEMBL
Match: A0A2P5DGF4 (Basic-leucine zipper transcription factor OS=Trema orientale OX=63057 GN=TorBZIP25 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.5e-07
Identity = 30/62 (48.39%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 71  KTESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVD---VGNPLLEPWQLNLQMQPL 130
           + ES N+++R +A+E T++ R+LNSV+Q V+D + LAVD   + +PLL+PWQL   +QP+
Sbjct: 75  QVESTNNVMRAQAMELTDRLRSLNSVLQIVEDVSGLAVDIPEIPDPLLKPWQLAYPIQPI 134

[Close]
BLAST of Carg07153 vs. ExPASy TrEMBL
Match: A0A2I4DMX9 (bZIP transcription factor 53 OS=Juglans regia OX=51240 GN=LOC108981706 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-06
Identity = 27/60 (45.00%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 73  ESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVD---VGNPLLEPWQLNLQMQPLAA 130
           ES N++LR +A+E T++ R+LNSV+Q +D+ +  ++D   + +PL+ PWQL+ QMQP+ A
Sbjct: 79  ESANNILRAQAMELTDRLRSLNSVLQIIDEVSGFSLDIPEIPDPLMNPWQLHHQMQPIVA 138

[Close]
BLAST of Carg07153 vs. TAIR 10
Match: AT3G62420.1 (basic region/leucine zipper motif 53 )

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0 

Query: 73  ESMNSLLRVKAIETTNQFRALNSVIQFVDDANALAVD---VGNPLLEPWQLNLQMQPLAA 130
           ES N++LR +A E T++ R+LNSV++ V++ +  A+D   +   +  PWQ+   MQP+ A
Sbjct: 80  ESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPEIPESMQNPWQMPCPMQPIRA 139

The following BLAST results are available for this feature:
BLAST of Carg07153 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014344.15.9e-79100.00hypothetical protein SDJN02_24521, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_008451653.11.5e-1048.45PREDICTED: bZIP transcription factor 53-like [Cucumis melo] >KAA0046693.1 bZIP t... [more]
XP_038900030.13.8e-0960.66bZIP transcription factor 53-like [Benincasa hispida][more]
KGN45565.23.2e-0856.25hypothetical protein Csa_016340 [Cucumis sativus][more]
PON72394.11.3e-0648.39Basic-leucine zipper transcription factor [Trema orientale][more]
BLAST of Carg07153 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LZP87.7e-0538.33bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1[more]
BLAST of Carg07153 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D3X17.4e-1148.45BZIP transcription factor 53-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BS277.4e-1148.45bZIP transcription factor 53-like OS=Cucumis melo OX=3656 GN=LOC103492885 PE=4 S... [more]
A0A0A0K6D01.6e-0856.25BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407660 PE=4 S... [more]
A0A2P5DGF46.5e-0748.39Basic-leucine zipper transcription factor OS=Trema orientale OX=63057 GN=TorBZIP... [more]
A0A2I4DMX92.5e-0645.00bZIP transcription factor 53 OS=Juglans regia OX=51240 GN=LOC108981706 PE=4 SV=1[more]
BLAST of Carg07153 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G62420.15.5e-0638.33basic region/leucine zipper motif 53 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07153-RACarg07153-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0000976 transcription cis-regulatory region binding