Carg07120 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07120
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr17: 7892316 .. 7894023 (+)
RNA-Seq ExpressionCarg07120
SyntenyCarg07120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGAATATTCATTCAAGCGTGTTCATCCACGTTACCACGGTGTTAGCCTCTGGTGGCTGGGCTAGGAGAGGGAAGAGCTTGTCAAATTCCTTTTTCTTTTGTGTAATATGCTTTATTTGGGGACTTGATTTAGTTACTTCACTTGTTTCATAAACTTCGAAATGTTATACAGCAGGTTCTTGGATTTTTGAGTGGCCATCAGAACTCATCAATTAGGGAGATTCTTTTCACTTCTCTTTGGTGGGTAATTGATATATCAAAACTTTCATATATTCATTATTGGAATCTGTTATGAATGATGACCACCATTGTATATGAACTTCAAAATTATAGTAGCCTTTCAGATCATTGAGATTATTTGATCCAAGATGTTTTAGTTAGTTTAGATGGAACTTTCTAAGAGTTTAAGCTGTCTGATGCTCATTAAGTTTGAATCTTTGGCTTGCAAAGTATGTATCAACTCTTCTTGTTGTAACGACTCAGATCCACCGCTAGCAGATATTGTTCTCTTCGGGCTTTCTCTTTCAGGTTTCTCCTCAAGGCTATAAAATGGTCTGCTAGGGGAAGGTTTTCCCTCAAGGCTATAAAATGGTCGGTTAGGGGAAGGTTTCCACACTCTTATAAATGGTGGTTTGTTCTCCTTCCAACCAATGTGGGACATCACAGTTGTAGAAGATATTGTTGATGAGAATAATGATGTTGGCCCACCCAAGTTCCTTACCCTAGGTGAGCAGACTGGTTGGTTAGACTCGACTTCGTCAACATATGATTGGAGTGAAGATATAATTAGTTAAGTTATGTTCGGGTTAGTTAAATGAAAAAATGAATTGTTGAGTACCTTTGAATTAAATTCAGACCAGATTAACAAAATTTTCATCTTGTTTAATGTTTTAGGTCATGCAAAATAATAGATATGAAAGCCTTAGGTAATGAAAAAAAATAATATATGAAACATAATTATTTCGTGGGCTAAATATCTATATGCTTTAACCCCATGGGAAGCAGTAAAAGAAATTTGAAGAAGGTTTTGTTTAACGCATCTTGGCCGAGCACTAAAAGAAAGAAATACTTTGTCGGTTGAAGGTGCTCTCTTCCTTCTCTACTCCGTCACATAATAGGAGAGAGGCTCACTCTTCATCCATAGTATCCTCTGTATCTTATGCATCTTCTGTCTCCTCTCTTGGTTTCAGGGAGCCTGTGAGCAAGAGTTCCCCCCCTTATGCATCTTCGGTCTCCTCTCTTGGTTTCAGTTTCAGTGAGCCGGTGAGCAAAAGTTCCCTCGAGTATCTCTCACAAAATAGTTGTGTTCAACATTTCATCAAATTTTGATATCACTATAACTAGTGGGAAAACAGTCGTCATTATGGTCAGTAATTACAACATATAATTACCTTCGATCTCTAGTAAAGGTTTCAGGGAAATTTTTTGAGAGTTTCTAATATAAATTGAGACCTGAAATTGTGTGATGGCTACACGTAACATCACAAATAGAATTGTTGAAGCGGTTTGTTCTTTTTTATTCAGAGATCAGTTAGTTTTCATTTGTTTGACTGTTTATCTGTTTAGTTCAAGTACTGTTCTGCTACCTTTTTTGTTGTTTTTTCTTGTGTGTTAAGCAAGGTTTGACCCAGATGACTTGTCAATGGCTACTTGTGTTGTAAATTCAATTGAATTACCTGATGGATCGTGTTGCCAAGGTGGG

mRNA sequence

ATGGCTTGGAATATTCATTCAAGCGTGTTCATCCACGTTACCACGTTACTTCACTTGTTTCATAAACTTCGAAATGTTATACAGCAGGTTCTTGGATTTTTGAGTGGCCATCAGAACTCATCAATTAGGGAGATTCTTTTCACTTCTCTTTGGTGGGTCATGCAAAATAATAGATATGAAAGCCTTAGGGAGCCTGTGAGCAAGAGTTCCCCCCCTTATGCATCTTCGGTCTCCTCTCTTGGTTTCAGTTTCAGTGAGCCGGTGAGCAAAACAAGGTTTGACCCAGATGACTTGTCAATGGCTACTTGTGTTGTAAATTCAATTGAATTACCTGATGGATCGTGTTGCCAAGGTGGG

Coding sequence (CDS)

ATGGCTTGGAATATTCATTCAAGCGTGTTCATCCACGTTACCACGTTACTTCACTTGTTTCATAAACTTCGAAATGTTATACAGCAGGTTCTTGGATTTTTGAGTGGCCATCAGAACTCATCAATTAGGGAGATTCTTTTCACTTCTCTTTGGTGGGTCATGCAAAATAATAGATATGAAAGCCTTAGGGAGCCTGTGAGCAAGAGTTCCCCCCCTTATGCATCTTCGGTCTCCTCTCTTGGTTTCAGTTTCAGTGAGCCGGTGAGCAAAACAAGGTTTGACCCAGATGACTTGTCAATGGCTACTTGTGTTGTAAATTCAATTGAATTACCTGATGGATCGTGTTGCCAAGGTGGG

Protein sequence

MAWNIHSSVFIHVTTLLHLFHKLRNVIQQVLGFLSGHQNSSIREILFTSLWWVMQNNRYESLREPVSKSSPPYASSVSSLGFSFSEPVSKTRFDPDDLSMATCVVNSIELPDGSCCQGG
Homology
[Close]
BLAST of Carg07120 vs. NCBI nr
Match: KAG7014312.1 (hypothetical protein SDJN02_24489, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MAWNIHSSVFIHVTTLLHLFHKLRNVIQQVLGFLSGHQNSSIREILFTSLWWVMQNNRYE 60
           MAWNIHSSVFIHVTTLLHLFHKLRNVIQQVLGFLSGHQNSSIREILFTSLWWVMQNNRYE
Sbjct: 1   MAWNIHSSVFIHVTTLLHLFHKLRNVIQQVLGFLSGHQNSSIREILFTSLWWVMQNNRYE 60

Query: 61  SLREPVSKSSPPYASSVSSLGFSFSEPVSKTRFDPDDLSMATCVVNSIELPDGSCCQGG 120
           SLREPVSKSSPPYASSVSSLGFSFSEPVSKTRFDPDDLSMATCVVNSIELPDGSCCQGG
Sbjct: 61  SLREPVSKSSPPYASSVSSLGFSFSEPVSKTRFDPDDLSMATCVVNSIELPDGSCCQGG 119

The following BLAST results are available for this feature:
BLAST of Carg07120 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014312.11.3e-60100.00hypothetical protein SDJN02_24489, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg07120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg07120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg07120 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07120-RACarg07120-RAmRNA