Carg07118 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg07118
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr17: 7889315 .. 7889697 (+)
RNA-Seq ExpressionCarg07118
SyntenyCarg07118
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAATTTAAACAAAAACTTGGAACTCGAGATTCTTTCTGTTTCGAACAAAAGGGCTACTGAATTCAGAAAAGGCTTTTCAACTGCCAGATTTATTGCCTCTGCAGAGAAATTCGCGGCGGTTTGAGAAATTTCAGGTACTTATTGTAATTCTTCCCCCGCGAAATCTACAAGGCTTGTTCATCGAAGTTATTCCATAAGTTTGTTGAATCATTCGGCATCTGGTTTGCTTGAAAATTTTCATTATCTGGGGATTAGTTTAGATAACTGGATGATTTAACTTTGATCTATTTGATTCAATTAGTATCATGCGAGGTTATGGACTGGTTTTCGCTTGCACTCTTGTGGGTTGGTCGGTGGATCGTGGTTCAGAGCTTGTTTGT

mRNA sequence

TAAAAATTTAAACAAAAACTTGGAACTCGAGATTCTTTCTGTTTCGAACAAAAGGGCTACTGAATTCAGAAAAGGCTTTTCAACTGCCAGATTTATTGCCTCTGCAGAGAAATTCGCGGCGGTTTGAGAAATTTCAGTATCATGCGAGGTTATGGACTGGTTTTCGCTTGCACTCTTGTGGGTTGGTCGGTGGATCGTGGTTCAGAGCTTGTTTGT

Coding sequence (CDS)

ATGCGAGGTTATGGACTGGTTTTCGCTTGCACTCTTGTGGGTTGGTCGGTGGATCGTGGTTCAGAGCTTGTTTGT

Protein sequence

MRGYGLVFACTLVGWSVDRGSELVC
Homology
[Close]
BLAST of Carg07118 vs. NCBI nr
Match: KAG7014310.1 (hypothetical protein SDJN02_24487, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-05
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1  MRGYGLVFACTLVGWSVDRGSELVC 26
          MRGYGLVFACTLVGWSVDRGSELVC
Sbjct: 1  MRGYGLVFACTLVGWSVDRGSELVC 25

The following BLAST results are available for this feature:
BLAST of Carg07118 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014310.11.2e-05100.00hypothetical protein SDJN02_24487, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg07118 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg07118 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg07118 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07118-RACarg07118-RAmRNA