Homology
BLAST of Carg07115 vs. NCBI nr
Match:
KAG7014307.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1721.4 bits (4457), Expect = 0.0e+00
Identity = 871/871 (100.00%), Postives = 871/871 (100.00%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60
MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60
Query: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIA 120
STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIA 120
Query: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180
EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180
Query: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
Query: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
Query: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
Query: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
Query: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
Query: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
Query: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600
TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600
Query: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
Query: 721 GAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKLLS 780
GAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKLLS
Sbjct: 721 GAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKLLS 780
Query: 781 HRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKDS 840
HRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKDS
Sbjct: 781 HRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKDS 840
Query: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
GTLKLLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 871
BLAST of Carg07115 vs. NCBI nr
Match:
XP_022953240.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita moschata] >XP_022953241.1 pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita moschata] >KAG6575757.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1691.0 bits (4378), Expect = 0.0e+00
Identity = 861/871 (98.85%), Postives = 864/871 (99.20%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60
MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHA+SLVKPLPPTPNHSA KSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60
Query: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIA 120
STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGR STRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 120
Query: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180
EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180
Query: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
Query: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
Query: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
Query: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
Query: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
Query: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
Query: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600
TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600
Query: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
Query: 721 GAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKLLS 780
GAQLVVLEGK+RNVWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLL- 780
Query: 781 HRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKDS 840
SILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK+S
Sbjct: 781 ---SILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKES 840
Query: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
GTLKLLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 867
BLAST of Carg07115 vs. NCBI nr
Match:
XP_023547932.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1687.5 bits (4369), Expect = 0.0e+00
Identity = 858/871 (98.51%), Postives = 864/871 (99.20%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60
MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHA+SLVKPLPPTPNHSA KSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60
Query: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIA 120
STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGR STRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 120
Query: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180
EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA+VR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVR 180
Query: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
Query: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
Query: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
Query: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
Query: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
Query: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
Query: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600
TYNSIIDAFGRSTTAESLVGASSDRQSESPS+MLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVS 600
Query: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIE+ASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
Query: 721 GAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKLLS 780
GAQLVVLEGK+RNVWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLL- 780
Query: 781 HRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKDS 840
SILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK+S
Sbjct: 781 ---SILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKES 840
Query: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
GTLKLLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 867
BLAST of Carg07115 vs. NCBI nr
Match:
XP_022991277.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1678.3 bits (4345), Expect = 0.0e+00
Identity = 857/873 (98.17%), Postives = 861/873 (98.63%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60
MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHA+SLVKPLPPTPNHSA KSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60
Query: 61 --STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTA 120
STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGR STRFVSKFHVGRPKSSMATRHTA
Sbjct: 61 STSTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA 120
Query: 121 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 180
IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL
Sbjct: 121 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 180
Query: 181 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 240
VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY
Sbjct: 181 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 240
Query: 241 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 300
FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN
Sbjct: 241 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 300
Query: 301 SFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 360
SFLAVCSRGGLWEAARSLFSEM DRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK
Sbjct: 301 SFLAVCSRGGLWEAARSLFSEMTDRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 360
Query: 361 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 420
KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA
Sbjct: 361 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 420
Query: 421 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 480
LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV
Sbjct: 421 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 480
Query: 481 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 540
YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN
Sbjct: 481 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 540
Query: 541 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQL 600
VVTYNSIIDAFGRSTTAESLVGASSDRQSESPS MLIEGVDERETENWDDDHAFKFYQQL
Sbjct: 541 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSFMLIEGVDERETENWDDDHAFKFYQQL 600
Query: 601 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL 660
VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL
Sbjct: 601 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL 660
Query: 661 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 720
EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ
Sbjct: 661 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 720
Query: 721 KRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKL 780
KRGAQLVVLEGK+RNVWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQLPKL
Sbjct: 721 KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL 780
Query: 781 LSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK 840
L SILTGWGKHSKVVGDGALRRAIKALLASMGAPF VAKCNIGRYVSTGSVVAAWLK
Sbjct: 781 L----SILTGWGKHSKVVGDGALRRAIKALLASMGAPFWVAKCNIGRYVSTGSVVAAWLK 840
Query: 841 DSGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
+SGTLKLLVLHDDRTHPDSENVDLIS+LQMVSL
Sbjct: 841 ESGTLKLLVLHDDRTHPDSENVDLISELQMVSL 869
BLAST of Carg07115 vs. NCBI nr
Match:
XP_038897325.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Benincasa hispida])
HSP 1 Score: 1581.2 bits (4093), Expect = 0.0e+00
Identity = 810/877 (92.36%), Postives = 832/877 (94.87%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHALSLVKPLPPTPNHSAP 60
MASTPPHCSITTAKPYQ HQYP NNLKNHR RQNGS TTTH +SLVKPLP TP HSA
Sbjct: 1 MASTPPHCSITTAKPYQNHQYPQNNLKNHRQNPRQNGSWTTTHKVSLVKPLPSTPGHSAT 60
Query: 61 KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHT 120
KS STSTSTPLSQSPNFPSL SL TSKSELASNFSGR STRFVSKFH GRPKSSMATRHT
Sbjct: 61 KSTSTSTSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMATRHT 120
Query: 121 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
AIAEEVLHQALQFGK+D SLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCF+FA
Sbjct: 121 AIAEEVLHQALQFGKDDVSLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFEFA 180
Query: 181 LVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
LVREG+KNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LVREGKKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
Query: 241 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 300
YFDQAIKVFESMK SGLKPNLVTYNAVIDACGKG VEF RVVEIFEEMLRNGVQPDRITY
Sbjct: 241 YFDQAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300
Query: 301 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 360
NS LAVCSRGGLWEAAR+LF+EM DRGIDQD+FTYNTLLDAVCKGGQMDLA+EIMLEMP
Sbjct: 301 NSLLAVCSRGGLWEAARNLFNEMVDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360
Query: 361 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 420
KKI PNVVTYSTMADGYAKAGRLEDAL+LYNEMK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALSLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 420
Query: 421 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 480
ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKF EVTRVFKEMK+DRV+PNLLTYSTLID
Sbjct: 421 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480
Query: 481 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
VYSKGSLYEEAMEVFREFK+AGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
Query: 541 NVVTYNSIIDAFGRSTTAES---LVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKF 600
NVVTYNSIIDAFGRSTTAES VGASS+RQSESPS MLIE VDE E +NWD DH FKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAESPVDSVGASSERQSESPSFMLIESVDESEIDNWDHDHIFKF 600
Query: 601 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDA 660
YQQLVSEKEG KKERLGKEEI SIL+VFKKMHELQIKPNVVTFSAILNACSRCKSIEDA
Sbjct: 601 YQQLVSEKEGATKKERLGKEEIRSILSVFKKMHELQIKPNVVTFSAILNACSRCKSIEDA 660
Query: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 720
SMLLEELRLFDNQVYGVAHGLLMGF+ENVWIQAQYLFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFNENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720
Query: 721 HFGQKRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQ 780
HFGQKRGAQLVVLEGK+R VWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 780
Query: 781 LPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVA 840
LPKLL SILTGWGKHSKVVGDGALRRAI+ALL SMGAPFRVAKCNIGRYVSTGSVVA
Sbjct: 781 LPKLL----SILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVA 840
Query: 841 AWLKDSGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
AWLK+SGTLKLLVLHDDRTHPDSENVDLISKLQM+SL
Sbjct: 841 AWLKESGTLKLLVLHDDRTHPDSENVDLISKLQMISL 873
BLAST of Carg07115 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 1060.4 bits (2741), Expect = 1.1e-308
Identity = 541/806 (67.12%), Postives = 645/806 (80.02%), Query Frame = 0
Query: 51 TPNHSAPKSASTSTSTP--LSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRP 110
+P SAP +S +T P LSQ PNF L+ T KS+L+S+FSGR STRFVSK H GR
Sbjct: 97 SPRGSAPPPSSVATVAPAQLSQPPNFSPLQ---TPKSDLSSDFSGRRSTRFVSKMHFGRQ 156
Query: 111 KSSMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECW 170
K++MATRH++ AE+ L A+ F +D +++L+FESKLCGS+D T+++RELGNR EC
Sbjct: 157 KTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTYIIRELGNRNECD 216
Query: 171 KAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSA 230
KA+ ++FA+ RE RKNE+GKLASAMISTLGR GKV +AK +FETA + GYGNTV+AFSA
Sbjct: 217 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 276
Query: 231 LISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRN 290
LISAYG+SG ++AI VF SMK+ GL+PNLVTYNAVIDACGKG +EF +V + F+EM RN
Sbjct: 277 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 336
Query: 291 GVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLA 350
GVQPDRIT+NS LAVCSRGGLWEAAR+LF EM +R I+QD+F+YNTLLDA+CKGGQMDLA
Sbjct: 337 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 396
Query: 351 HEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSI 410
EI+ +MP K+I PNVV+YST+ DG+AKAGR ++ALNL+ EM+ LGI LDRVSYNTL+SI
Sbjct: 397 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 456
Query: 411 YAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPN 470
Y K+GR E+AL++ REM S G+KKDVVTYNALL GYGKQGK+ EV +VF EMKR+ V PN
Sbjct: 457 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 516
Query: 471 LLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLD 530
LLTYSTLID YSKG LY+EAME+FREFK AGL+ADVVLYS LI+ALCKNGLV SAVSL+D
Sbjct: 517 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 576
Query: 531 EMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDD 590
EM KEGI PNVVTYNSIIDAFGRS T + S S S+ TE +
Sbjct: 577 EMTKEGISPNVVTYNSIIDAFGRSATMD-----RSADYSNGGSLPFSSSALSALTET-EG 636
Query: 591 DHAFKFYQQLVSEKEGPAKKE-RLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSR 650
+ + + QL +E K+ G +E+ IL VF+KMH+L+IKPNVVTFSAILNACSR
Sbjct: 637 NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 696
Query: 651 CKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYN 710
C S EDASMLLEELRLFDN+VYGV HGLLMG ENVW+QAQ LFD+V MD STASAFYN
Sbjct: 697 CNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYN 756
Query: 711 ALTDMLWHFGQKRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHS 770
ALTDMLWHFGQKRGA+LV LEG+ R VWE +WSDSCLDLHLMSSGAA AMVHAWLL I S
Sbjct: 757 ALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRS 816
Query: 771 VVFNGHQLPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYV 830
+V+ GH+LPK+L SILTGWGKHSKVVGDGALRRA++ LL M APF ++KCN+GR+
Sbjct: 817 IVYEGHELPKVL----SILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFT 876
Query: 831 STGSVVAAWLKDSGTLKLLVLHDDRT 854
S+GSVVA WL++S TLKLL+LHD T
Sbjct: 877 SSGSVVATWLRESATLKLLILHDHIT 889
BLAST of Carg07115 vs. ExPASy Swiss-Prot
Match:
Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 288.1 bits (736), Expect = 3.3e-76
Identity = 209/811 (25.77%), Postives = 395/811 (48.71%), Query Frame = 0
Query: 77 LRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIAEEVLHQALQFGKNDAS 136
LR LS + S FSG+ + +G P S+ + E L L S
Sbjct: 34 LRFLSGGNRKPCS-FSGKIKAK-TKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGS 93
Query: 137 LDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMIS 196
+ L F++KL D+ + +E RG+ +++R F + + R+ + + MIS
Sbjct: 94 IARCLDIFKNKL-SLNDFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMIS 153
Query: 197 TLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKP 256
LGR G ++ VF+ S+G +VF+++ALI+AYG++G ++ ++++ + MK+ + P
Sbjct: 154 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 213
Query: 257 NLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSL 316
+++TYN VI+AC +G +++ ++ +F EM G+QPD +TYN+ L+ C+ GL + A +
Sbjct: 214 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 273
Query: 317 FSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAK 376
F M D GI D+ TY+ L++ K +++ +++ EM S P++ +Y+ + + YAK
Sbjct: 274 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 333
Query: 377 AGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVT 436
+G +++A+ ++++M+ G + +Y+ L++++ + GR++D + EM SS D T
Sbjct: 334 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 393
Query: 437 YNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 496
YN L++ +G+ G F EV +F +M + + P++ TY +I KG L+E+A ++ +
Sbjct: 394 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 453
Query: 497 RAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAE 556
+ Y+ +I A + L + A+ + M + G P++ T++S++ +F R +
Sbjct: 454 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 513
Query: 557 S-------LVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKE 616
LV + R ++ + + E + + A K Y + + P ++
Sbjct: 514 ESEAILSRLVDSGIPRNRDTFNAQI-----EAYKQGGKFEEAVKTYVDMEKSRCDPDERT 573
Query: 617 RLGKEEIGSILNV-------FKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE-L 676
+ S + F++M I P+++ + +L + + +D + LLEE L
Sbjct: 574 LEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 633
Query: 677 RLFDNQVYGVAHGLLMG--FSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQK 736
+ ++ V ++ G ++ W +Y+ D++ FYNAL D LW GQK
Sbjct: 634 SNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQK 693
Query: 737 RGAQLVVLEGKKRNVWETLWSDSCL----DLHLMSSGAACAMVHAWLLGIHSVVFNGH-- 796
A V+ E KR ++ L+ + L D+H MS G + WL I+ ++ G
Sbjct: 694 ERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKGDLP 753
Query: 797 QLPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVV 856
QL ++S R + K S + A L + + F N GR + S
Sbjct: 754 QLAVVVSVRGQL----EKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRS-- 813
Query: 857 AAWLKDSGTLKLLVLHDDRTHPDSENVDLIS 865
LK L+ + T +SEN +L++
Sbjct: 814 --------QLKQLLSTKEPTSEESENKNLVA 821
BLAST of Carg07115 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 3.3e-68
Identity = 186/684 (27.19%), Postives = 337/684 (49.27%), Query Frame = 0
Query: 46 KPLPPTPNHSAPKSASTSTSTPLSQSPNFP--------SLRSLSTSKSELASNFSGRCST 105
KP NH ++ +TS LS P P L S+ ++S S +
Sbjct: 18 KPYSHDQNHHISRTPFLTTS--LSSPPPPPVEPLLHDVFLHQNPNSRQPISSQTSRNRNR 77
Query: 106 RFVSKF---HVGRPKS--SMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESK-LCGS 165
+ K ++G+P S ++ + + ++ G+ D+ L + F+ K S
Sbjct: 78 TRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTS 137
Query: 166 EDYTFLLRELGNRGECWKAIRCFD-FALVREGRKNERGKLASAMISTLGRLGKVELAKGV 225
+ L+ LG + A+R FD F ++ + + + +IS LG+ G+V A +
Sbjct: 138 SELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 197
Query: 226 FETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGK 285
F +G+ V+++++LISA+ SG + +A+ VF+ M++ G KP L+TYN +++ GK
Sbjct: 198 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 257
Query: 286 GVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIF 345
+ ++ + E+M +G+ PD TYN+ + C RG L + A +F EM G D
Sbjct: 258 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 317
Query: 346 TYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEM 405
TYN LLD K + A +++ EM SP++VTY+++ YA+ G L++A+ L N+M
Sbjct: 318 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 377
Query: 406 KLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKF 465
G D +Y TL+S + + G+ E A+++ EM ++G K ++ T+NA + YG +GKF
Sbjct: 378 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 437
Query: 466 TEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSEL 525
TE+ ++F E+ + P+++T++TL+ V+ + + E VF+E KRAG + ++ L
Sbjct: 438 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 497
Query: 526 INALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESP 585
I+A + G + A+++ M+ G+ P++ TYN+++ A R E QSE
Sbjct: 498 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE---------QSEK- 557
Query: 586 SIMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQ 645
+L E D R N + L + G +EIG + ++ ++++
Sbjct: 558 --VLAEMEDGRCKPN-----ELTYCSLLHAYANG---------KEIGLMHSLAEEVYSGV 617
Query: 646 IKPNVVTFSAILNACSRCKSIEDASMLLEEL--RLFDNQVYGVAHGLLMGFSENVWIQAQ 705
I+P V ++ CS+C + +A EL R F + + + + + +A
Sbjct: 618 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 673
Query: 706 YLFDEVKRMDSSTASAFYNALTDM 713
+ D +K + + A YN+L M
Sbjct: 678 GVLDYMKERGFTPSMATYNSLMYM 673
BLAST of Carg07115 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 7.1e-55
Identity = 150/546 (27.47%), Postives = 271/546 (49.63%), Query Frame = 0
Query: 136 SLDNILLNFESKLCGSEDYTFLL--------RELGNRGECWKAIRCFDFALVREGRKNER 195
SLD+ N CGS D F L R+L E + +R F + +
Sbjct: 153 SLDSTFSN-----CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDA----- 212
Query: 196 GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFE 255
+A+I +L R+G VELA GV++ G G V+ + +++A K G ++
Sbjct: 213 ---CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 272
Query: 256 SMKDSGLKPNLVTYNAVIDA-CGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSR 315
+++ G+ P++VTYN +I A KG++E E+ M G P TYN+ + +
Sbjct: 273 QVQEKGVYPDIVTYNTLISAYSSKGLME--EAFELMNAMPGKGFSPGVYTYNTVINGLCK 332
Query: 316 GGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVT 375
G +E A+ +F+EM G+ D TY +LL CK G + ++ +M S+ + P++V
Sbjct: 333 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 392
Query: 376 YSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMG 435
+S+M + ++G L+ AL +N +K G+ D V Y L+ Y + G A+N+ EM
Sbjct: 393 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 452
Query: 436 SSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYE 495
G DVVTYN +L G K+ E ++F EM ++P+ T + LID + K +
Sbjct: 453 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 512
Query: 496 EAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSII 555
AME+F++ K ++ DVV Y+ L++ K G +D+A + +M+ + I P ++Y+ ++
Sbjct: 513 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 572
Query: 556 DAF-GRSTTAESL-VGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVSEKEG 615
+A + AE+ V ++ P++M+ + + + + F ++++SE
Sbjct: 573 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 632
Query: 616 PAKKER-------LGKEEIGSILNVFKKMHELQ--IKPNVVTFSAILNACSRCKSIEDAS 662
P + +E + + KKM E Q + P+V T+++IL+ R +++A
Sbjct: 633 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 683
BLAST of Carg07115 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 7.9e-54
Identity = 127/390 (32.56%), Postives = 204/390 (52.31%), Query Frame = 0
Query: 154 YTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFET 213
Y+ L+ L G C +A + FD ++ + G K E + + + VE+ G+ +
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFD-SMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDL 363
Query: 214 ALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVID-ACGKGV 273
+ G + FS LI AY K G DQA+ VF M+ GL PN VTY AVI C G
Sbjct: 364 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 423
Query: 274 VEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTY 333
VE + FE+M+ G+ P I YNS + WE A L EM DRGI + +
Sbjct: 424 VEDAML--YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 483
Query: 334 NTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKL 393
N+++D+ CK G++ + ++ M + PNV+TY+T+ +GY AG++++A+ L + M
Sbjct: 484 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 543
Query: 394 LGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTE 453
+G+ + V+Y+TL++ Y K+ R EDAL + +EM SSGV D++TYN +L G + +
Sbjct: 544 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 603
Query: 454 VTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSELIN 513
++ + L TY+ ++ K L ++A+++F+ LK + ++ +I+
Sbjct: 604 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 663
Query: 514 ALCKNGLVDSAVSLLDEMIKEGIRPNVVTY 543
AL K G D A L G+ PN TY
Sbjct: 664 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
BLAST of Carg07115 vs. ExPASy TrEMBL
Match:
A0A6J1GMF8 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455846 PE=3 SV=1)
HSP 1 Score: 1691.0 bits (4378), Expect = 0.0e+00
Identity = 861/871 (98.85%), Postives = 864/871 (99.20%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60
MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHA+SLVKPLPPTPNHSA KSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60
Query: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIA 120
STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGR STRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61 STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 120
Query: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180
EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180
Query: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240
Query: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300
Query: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360
Query: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420
Query: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480
Query: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540
Query: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600
TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600
Query: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720
Query: 721 GAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKLLS 780
GAQLVVLEGK+RNVWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLL- 780
Query: 781 HRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKDS 840
SILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK+S
Sbjct: 781 ---SILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKES 840
Query: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
GTLKLLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 867
BLAST of Carg07115 vs. ExPASy TrEMBL
Match:
A0A6J1JLC8 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487979 PE=3 SV=1)
HSP 1 Score: 1678.3 bits (4345), Expect = 0.0e+00
Identity = 857/873 (98.17%), Postives = 861/873 (98.63%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60
MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHA+SLVKPLPPTPNHSA KSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60
Query: 61 --STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTA 120
STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGR STRFVSKFHVGRPKSSMATRHTA
Sbjct: 61 STSTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA 120
Query: 121 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 180
IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL
Sbjct: 121 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 180
Query: 181 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 240
VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY
Sbjct: 181 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 240
Query: 241 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 300
FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN
Sbjct: 241 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 300
Query: 301 SFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 360
SFLAVCSRGGLWEAARSLFSEM DRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK
Sbjct: 301 SFLAVCSRGGLWEAARSLFSEMTDRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 360
Query: 361 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 420
KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA
Sbjct: 361 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 420
Query: 421 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 480
LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV
Sbjct: 421 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 480
Query: 481 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 540
YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN
Sbjct: 481 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 540
Query: 541 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQL 600
VVTYNSIIDAFGRSTTAESLVGASSDRQSESPS MLIEGVDERETENWDDDHAFKFYQQL
Sbjct: 541 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSFMLIEGVDERETENWDDDHAFKFYQQL 600
Query: 601 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL 660
VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL
Sbjct: 601 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL 660
Query: 661 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 720
EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ
Sbjct: 661 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 720
Query: 721 KRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKL 780
KRGAQLVVLEGK+RNVWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQLPKL
Sbjct: 721 KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL 780
Query: 781 LSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK 840
L SILTGWGKHSKVVGDGALRRAIKALLASMGAPF VAKCNIGRYVSTGSVVAAWLK
Sbjct: 781 L----SILTGWGKHSKVVGDGALRRAIKALLASMGAPFWVAKCNIGRYVSTGSVVAAWLK 840
Query: 841 DSGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
+SGTLKLLVLHDDRTHPDSENVDLIS+LQMVSL
Sbjct: 841 ESGTLKLLVLHDDRTHPDSENVDLISELQMVSL 869
BLAST of Carg07115 vs. ExPASy TrEMBL
Match:
A0A0A0KB90 (Pentatricopeptide repeat-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407790 PE=3 SV=1)
HSP 1 Score: 1555.0 bits (4025), Expect = 0.0e+00
Identity = 800/877 (91.22%), Postives = 822/877 (93.73%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHALSLVKPLPPTPNHSAP 60
MASTPPHCSIT AKPYQTHQYP NNLKNHR RQNG TTTH LVKPLP TP HSA
Sbjct: 1 MASTPPHCSITAAKPYQTHQYPQNNLKNHRQNARQNGPWTTTHKFPLVKPLPSTPGHSAT 60
Query: 61 KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHT 120
K STSTPLSQSPNFPSL SL TSKSELASNFSGR STRFVSKFH GRPKSSM TRH+
Sbjct: 61 K----STSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHS 120
Query: 121 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
AIAEEVLHQ LQFGK+DASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA
Sbjct: 121 AIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
Query: 181 LVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
LVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
Query: 241 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 300
YFD+AIKVFESMK SGLKPNLVTYNAVIDACGKG VEF RVVEIFEEMLRNGVQPDRITY
Sbjct: 241 YFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300
Query: 301 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 360
NS LAVCSRGGLWEAAR+LF+EM DRGIDQD+FTYNTLLDAVCKGGQMDLA+EIMLEMP
Sbjct: 301 NSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360
Query: 361 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 420
KKI PNVVTYSTMADGYAKAGRLEDALNLYNEMK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 420
Query: 421 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 480
AL VC+EMGSSGVKKDVVTYNALLDGYGKQGKF EVTRVFKEMK+DRV+PNLLTYSTLID
Sbjct: 421 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480
Query: 481 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
VYSKGSLYEEAMEVFREFK+AGLKADVVLYSELINALCKNGLVDSAV LLDEM KEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 540
Query: 541 NVVTYNSIIDAFGRSTTAESL---VGASSDRQSESPSIMLIEGVDERETENWDDDHAFKF 600
NVVTYNSIIDAFGRSTTAE L VGAS++RQSESPS MLIEGVDE E NWDD H FKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEI-NWDDGHVFKF 600
Query: 601 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDA 660
YQQLVSEKEGPAKKERLGKEEI SIL+VFKKMHEL+IKPNVVTFSAILNACSRCKSIEDA
Sbjct: 601 YQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660
Query: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 720
SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720
Query: 721 HFGQKRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQ 780
HFGQKRGAQLVVLEGK+R VWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVF GHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQ 780
Query: 781 LPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVA 840
LPKLL SILTGWGKHSKVVGDGALRRAI+ALL SMGAPFRVAKCNIGRYVSTGSVVA
Sbjct: 781 LPKLL----SILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVA 840
Query: 841 AWLKDSGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
AWLK+SGTLKLLVLHDDRTHPDSEN+DLISKLQ +SL
Sbjct: 841 AWLKESGTLKLLVLHDDRTHPDSENMDLISKLQTISL 868
BLAST of Carg07115 vs. ExPASy TrEMBL
Match:
A0A1S3BSC2 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492746 PE=3 SV=1)
HSP 1 Score: 1553.9 bits (4022), Expect = 0.0e+00
Identity = 799/877 (91.11%), Postives = 825/877 (94.07%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHALSLVKPLPPTPNHSAP 60
MASTPPHCSITTAKPYQTHQYP NNLKNHR RQNG TTTH SLVK P TP HSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPQNNLKNHRQNPRQNGPWTTTHKFSLVK--PSTPGHSAK 60
Query: 61 KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHT 120
K STSTPLSQSPNF SL SL TSKSELASNFSG STRFVSKFH GRPKSSMATRHT
Sbjct: 61 K----STSTPLSQSPNFHSLCSLPTSKSELASNFSGHRSTRFVSKFHFGRPKSSMATRHT 120
Query: 121 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
AIAEEVLHQ LQFGK+DASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA
Sbjct: 121 AIAEEVLHQLLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
Query: 181 LVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
LVREGRKNE+GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LVREGRKNEKGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
Query: 241 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 300
YFD+AIKVFESMK SGLKPNLVTYNAVIDACGKG VEF RVVEIFEEMLRNGVQPDRITY
Sbjct: 241 YFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300
Query: 301 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 360
NS LAVCSRGGLWEAA++LF+EM DRGIDQD+FTYNTLLDAVCKGGQMDLA+EIMLEMP
Sbjct: 301 NSLLAVCSRGGLWEAAQNLFNEMVDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360
Query: 361 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 420
KKI PNVVTYSTMADGYAKAGRLEDALNLYN+MK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNDMKFLGIGLDRVSYNTLLSIYAKLGRFED 420
Query: 421 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 480
AL VC+EMGSSGVKKDVVTYNALLDGYGKQGKF EVTRVFKEMK+DRV+PNLLTYSTLID
Sbjct: 421 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480
Query: 481 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
VYSKGSLYEEAMEVFREFK+AGLKADVVLYSELINALCKNGLVDSAV LLDEM KEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 540
Query: 541 NVVTYNSIIDAFGRSTTAESL---VGASSDRQSESPSIMLIEGVDERETENWDDDHAFKF 600
NVVTYNSIIDAFGRSTTAESL VGAS++RQSESPS MLIEGVDE E +NWDDDH FKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAESLVDVVGASNERQSESPSFMLIEGVDESEIDNWDDDHVFKF 600
Query: 601 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDA 660
YQQLVSEKEGPAKKERLGKEEI SIL+VFKKMHEL+IKPNVVTFSAILNACSRCKSIEDA
Sbjct: 601 YQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660
Query: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 720
SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720
Query: 721 HFGQKRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQ 780
HFGQKRGAQLVVLEGK+R VWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 780
Query: 781 LPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVA 840
LPKLL SILTGWGKHSKVVGDGALRRAI+ALL SMGAPFRVAKCNIGRYVSTGSVVA
Sbjct: 781 LPKLL----SILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVA 840
Query: 841 AWLKDSGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
AWLK+SGTLKLLVLHDDRTHPDSE++DLISKLQ +SL
Sbjct: 841 AWLKESGTLKLLVLHDDRTHPDSESMDLISKLQTISL 867
BLAST of Carg07115 vs. ExPASy TrEMBL
Match:
A0A6J1D2T9 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016779 PE=3 SV=1)
HSP 1 Score: 1541.9 bits (3991), Expect = 0.0e+00
Identity = 789/877 (89.97%), Postives = 822/877 (93.73%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHALSLVKPLPPTPNHSAP 60
MASTPPHCSITTAK YQTHQYP NNLKNHR RQNGS TT +SLVKPLP +P +A
Sbjct: 1 MASTPPHCSITTAKAYQTHQYPQNNLKNHRQNPRQNGS-WTTQKVSLVKPLPASPAQNAT 60
Query: 61 KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHT 120
KS+++ST TP+SQ+PNFPSL SL SKSELASNFSGR STRFVSKFH GRPKSSMATRHT
Sbjct: 61 KSSTSSTPTPISQNPNFPSLCSLPASKSELASNFSGRRSTRFVSKFHFGRPKSSMATRHT 120
Query: 121 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
IAEEVLHQALQFGK+D SLDN+LLNFESKLCGSEDYTFLLRELGNRGECWKAIRCF+FA
Sbjct: 121 VIAEEVLHQALQFGKDDGSLDNVLLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFEFA 180
Query: 181 LVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
L REGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LGREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
Query: 241 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 300
YFD+AIKVFESMKDSGLKPNLVTYNAVIDACGKG VEF RVVEIF+EMLRNGVQPDRITY
Sbjct: 241 YFDRAIKVFESMKDSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITY 300
Query: 301 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 360
NS LAVCSRGGLWEAAR+LF EM DRGIDQDIFTYNTLLDAVCKGGQMDLA EIMLEMP+
Sbjct: 301 NSLLAVCSRGGLWEAARNLFHEMVDRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMLEMPA 360
Query: 361 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 420
KKI PNVVTYSTMADGYAKAGRLEDALNLYNEMK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 420
Query: 421 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 480
ALNVCREMGSSGVKKD VTYNALLDGYGKQGKF EVTRVFKEMKRDRV PNLLTYSTLID
Sbjct: 421 ALNVCREMGSSGVKKDAVTYNALLDGYGKQGKFNEVTRVFKEMKRDRVTPNLLTYSTLID 480
Query: 481 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
VYSKGSL+EEAMEVF EFK+AGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP
Sbjct: 481 VYSKGSLFEEAMEVFHEFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
Query: 541 NVVTYNSIIDAFGRSTTAESL---VGASSDRQSESPSIMLIEGVDERETENWDDDHAFKF 600
NVVTYNSIIDAFGRSTT ESL VGA+S+RQ E+PS MLIEGVDE E ENWDDDH KF
Sbjct: 541 NVVTYNSIIDAFGRSTTVESLVDAVGAASERQRETPSFMLIEGVDESEMENWDDDHVVKF 600
Query: 601 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDA 660
YQQLVSEKEGPAKKERLGK+EI SIL+VFKKMHEL+IKPNVVTFSAILNACSRCKSIEDA
Sbjct: 601 YQQLVSEKEGPAKKERLGKQEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660
Query: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 720
SMLLEELRLFDNQVYGVAHGLLMG+SENVWIQAQ+LFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGYSENVWIQAQFLFDEVKQMDSSTASAFYNALTDMLW 720
Query: 721 HFGQKRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQ 780
HFGQKRGAQLVVLEGK+R VWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 780
Query: 781 LPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVA 840
LPKLL SILTGWGKHSKVVGDGALRR I+ALL MGAPFR+AKCNIGR+VSTGSVVA
Sbjct: 781 LPKLL----SILTGWGKHSKVVGDGALRRVIEALLTGMGAPFRIAKCNIGRFVSTGSVVA 840
Query: 841 AWLKDSGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 872
AWLK+SGTLKLLVLHDDR HPDSENVDLISKLQM+SL
Sbjct: 841 AWLKESGTLKLLVLHDDRIHPDSENVDLISKLQMISL 872
BLAST of Carg07115 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 1060.4 bits (2741), Expect = 7.5e-310
Identity = 541/806 (67.12%), Postives = 645/806 (80.02%), Query Frame = 0
Query: 51 TPNHSAPKSASTSTSTP--LSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRP 110
+P SAP +S +T P LSQ PNF L+ T KS+L+S+FSGR STRFVSK H GR
Sbjct: 97 SPRGSAPPPSSVATVAPAQLSQPPNFSPLQ---TPKSDLSSDFSGRRSTRFVSKMHFGRQ 156
Query: 111 KSSMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECW 170
K++MATRH++ AE+ L A+ F +D +++L+FESKLCGS+D T+++RELGNR EC
Sbjct: 157 KTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTYIIRELGNRNECD 216
Query: 171 KAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSA 230
KA+ ++FA+ RE RKNE+GKLASAMISTLGR GKV +AK +FETA + GYGNTV+AFSA
Sbjct: 217 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 276
Query: 231 LISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRN 290
LISAYG+SG ++AI VF SMK+ GL+PNLVTYNAVIDACGKG +EF +V + F+EM RN
Sbjct: 277 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 336
Query: 291 GVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLA 350
GVQPDRIT+NS LAVCSRGGLWEAAR+LF EM +R I+QD+F+YNTLLDA+CKGGQMDLA
Sbjct: 337 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 396
Query: 351 HEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSI 410
EI+ +MP K+I PNVV+YST+ DG+AKAGR ++ALNL+ EM+ LGI LDRVSYNTL+SI
Sbjct: 397 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 456
Query: 411 YAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPN 470
Y K+GR E+AL++ REM S G+KKDVVTYNALL GYGKQGK+ EV +VF EMKR+ V PN
Sbjct: 457 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 516
Query: 471 LLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLD 530
LLTYSTLID YSKG LY+EAME+FREFK AGL+ADVVLYS LI+ALCKNGLV SAVSL+D
Sbjct: 517 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 576
Query: 531 EMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDD 590
EM KEGI PNVVTYNSIIDAFGRS T + S S S+ TE +
Sbjct: 577 EMTKEGISPNVVTYNSIIDAFGRSATMD-----RSADYSNGGSLPFSSSALSALTET-EG 636
Query: 591 DHAFKFYQQLVSEKEGPAKKE-RLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSR 650
+ + + QL +E K+ G +E+ IL VF+KMH+L+IKPNVVTFSAILNACSR
Sbjct: 637 NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 696
Query: 651 CKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYN 710
C S EDASMLLEELRLFDN+VYGV HGLLMG ENVW+QAQ LFD+V MD STASAFYN
Sbjct: 697 CNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYN 756
Query: 711 ALTDMLWHFGQKRGAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHS 770
ALTDMLWHFGQKRGA+LV LEG+ R VWE +WSDSCLDLHLMSSGAA AMVHAWLL I S
Sbjct: 757 ALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRS 816
Query: 771 VVFNGHQLPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYV 830
+V+ GH+LPK+L SILTGWGKHSKVVGDGALRRA++ LL M APF ++KCN+GR+
Sbjct: 817 IVYEGHELPKVL----SILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFT 876
Query: 831 STGSVVAAWLKDSGTLKLLVLHDDRT 854
S+GSVVA WL++S TLKLL+LHD T
Sbjct: 877 SSGSVVATWLRESATLKLLILHDHIT 889
BLAST of Carg07115 vs. TAIR 10
Match:
AT1G74850.1 (plastid transcriptionally active 2 )
HSP 1 Score: 288.1 bits (736), Expect = 2.3e-77
Identity = 209/811 (25.77%), Postives = 395/811 (48.71%), Query Frame = 0
Query: 77 LRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIAEEVLHQALQFGKNDAS 136
LR LS + S FSG+ + +G P S+ + E L L S
Sbjct: 34 LRFLSGGNRKPCS-FSGKIKAK-TKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGS 93
Query: 137 LDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMIS 196
+ L F++KL D+ + +E RG+ +++R F + + R+ + + MIS
Sbjct: 94 IARCLDIFKNKL-SLNDFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMIS 153
Query: 197 TLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKP 256
LGR G ++ VF+ S+G +VF+++ALI+AYG++G ++ ++++ + MK+ + P
Sbjct: 154 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 213
Query: 257 NLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSL 316
+++TYN VI+AC +G +++ ++ +F EM G+QPD +TYN+ L+ C+ GL + A +
Sbjct: 214 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 273
Query: 317 FSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAK 376
F M D GI D+ TY+ L++ K +++ +++ EM S P++ +Y+ + + YAK
Sbjct: 274 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 333
Query: 377 AGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVT 436
+G +++A+ ++++M+ G + +Y+ L++++ + GR++D + EM SS D T
Sbjct: 334 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 393
Query: 437 YNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 496
YN L++ +G+ G F EV +F +M + + P++ TY +I KG L+E+A ++ +
Sbjct: 394 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 453
Query: 497 RAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAE 556
+ Y+ +I A + L + A+ + M + G P++ T++S++ +F R +
Sbjct: 454 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 513
Query: 557 S-------LVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKE 616
LV + R ++ + + E + + A K Y + + P ++
Sbjct: 514 ESEAILSRLVDSGIPRNRDTFNAQI-----EAYKQGGKFEEAVKTYVDMEKSRCDPDERT 573
Query: 617 RLGKEEIGSILNV-------FKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE-L 676
+ S + F++M I P+++ + +L + + +D + LLEE L
Sbjct: 574 LEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 633
Query: 677 RLFDNQVYGVAHGLLMG--FSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQK 736
+ ++ V ++ G ++ W +Y+ D++ FYNAL D LW GQK
Sbjct: 634 SNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQK 693
Query: 737 RGAQLVVLEGKKRNVWETLWSDSCL----DLHLMSSGAACAMVHAWLLGIHSVVFNGH-- 796
A V+ E KR ++ L+ + L D+H MS G + WL I+ ++ G
Sbjct: 694 ERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKGDLP 753
Query: 797 QLPKLLSHRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVV 856
QL ++S R + K S + A L + + F N GR + S
Sbjct: 754 QLAVVVSVRGQL----EKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRS-- 813
Query: 857 AAWLKDSGTLKLLVLHDDRTHPDSENVDLIS 865
LK L+ + T +SEN +L++
Sbjct: 814 --------QLKQLLSTKEPTSEESENKNLVA 821
BLAST of Carg07115 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 261.5 bits (667), Expect = 2.3e-69
Identity = 186/684 (27.19%), Postives = 337/684 (49.27%), Query Frame = 0
Query: 46 KPLPPTPNHSAPKSASTSTSTPLSQSPNFP--------SLRSLSTSKSELASNFSGRCST 105
KP NH ++ +TS LS P P L S+ ++S S +
Sbjct: 18 KPYSHDQNHHISRTPFLTTS--LSSPPPPPVEPLLHDVFLHQNPNSRQPISSQTSRNRNR 77
Query: 106 RFVSKF---HVGRPKS--SMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESK-LCGS 165
+ K ++G+P S ++ + + ++ G+ D+ L + F+ K S
Sbjct: 78 TRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTS 137
Query: 166 EDYTFLLRELGNRGECWKAIRCFD-FALVREGRKNERGKLASAMISTLGRLGKVELAKGV 225
+ L+ LG + A+R FD F ++ + + + +IS LG+ G+V A +
Sbjct: 138 SELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 197
Query: 226 FETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGK 285
F +G+ V+++++LISA+ SG + +A+ VF+ M++ G KP L+TYN +++ GK
Sbjct: 198 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 257
Query: 286 GVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIF 345
+ ++ + E+M +G+ PD TYN+ + C RG L + A +F EM G D
Sbjct: 258 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 317
Query: 346 TYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEM 405
TYN LLD K + A +++ EM SP++VTY+++ YA+ G L++A+ L N+M
Sbjct: 318 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 377
Query: 406 KLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKF 465
G D +Y TL+S + + G+ E A+++ EM ++G K ++ T+NA + YG +GKF
Sbjct: 378 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 437
Query: 466 TEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSEL 525
TE+ ++F E+ + P+++T++TL+ V+ + + E VF+E KRAG + ++ L
Sbjct: 438 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 497
Query: 526 INALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESP 585
I+A + G + A+++ M+ G+ P++ TYN+++ A R E QSE
Sbjct: 498 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE---------QSEK- 557
Query: 586 SIMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQ 645
+L E D R N + L + G +EIG + ++ ++++
Sbjct: 558 --VLAEMEDGRCKPN-----ELTYCSLLHAYANG---------KEIGLMHSLAEEVYSGV 617
Query: 646 IKPNVVTFSAILNACSRCKSIEDASMLLEEL--RLFDNQVYGVAHGLLMGFSENVWIQAQ 705
I+P V ++ CS+C + +A EL R F + + + + + +A
Sbjct: 618 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 673
Query: 706 YLFDEVKRMDSSTASAFYNALTDM 713
+ D +K + + A YN+L M
Sbjct: 678 GVLDYMKERGFTPSMATYNSLMYM 673
BLAST of Carg07115 vs. TAIR 10
Match:
AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 217.2 bits (552), Expect = 5.1e-56
Identity = 150/546 (27.47%), Postives = 271/546 (49.63%), Query Frame = 0
Query: 136 SLDNILLNFESKLCGSEDYTFLL--------RELGNRGECWKAIRCFDFALVREGRKNER 195
SLD+ N CGS D F L R+L E + +R F + +
Sbjct: 153 SLDSTFSN-----CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDA----- 212
Query: 196 GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFE 255
+A+I +L R+G VELA GV++ G G V+ + +++A K G ++
Sbjct: 213 ---CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 272
Query: 256 SMKDSGLKPNLVTYNAVIDA-CGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSR 315
+++ G+ P++VTYN +I A KG++E E+ M G P TYN+ + +
Sbjct: 273 QVQEKGVYPDIVTYNTLISAYSSKGLME--EAFELMNAMPGKGFSPGVYTYNTVINGLCK 332
Query: 316 GGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVT 375
G +E A+ +F+EM G+ D TY +LL CK G + ++ +M S+ + P++V
Sbjct: 333 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 392
Query: 376 YSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMG 435
+S+M + ++G L+ AL +N +K G+ D V Y L+ Y + G A+N+ EM
Sbjct: 393 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 452
Query: 436 SSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYE 495
G DVVTYN +L G K+ E ++F EM ++P+ T + LID + K +
Sbjct: 453 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 512
Query: 496 EAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSII 555
AME+F++ K ++ DVV Y+ L++ K G +D+A + +M+ + I P ++Y+ ++
Sbjct: 513 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 572
Query: 556 DAF-GRSTTAESL-VGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVSEKEG 615
+A + AE+ V ++ P++M+ + + + + F ++++SE
Sbjct: 573 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 632
Query: 616 PAKKER-------LGKEEIGSILNVFKKMHELQ--IKPNVVTFSAILNACSRCKSIEDAS 662
P + +E + + KKM E Q + P+V T+++IL+ R +++A
Sbjct: 633 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 683
BLAST of Carg07115 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 211.8 bits (538), Expect = 2.1e-54
Identity = 114/355 (32.11%), Postives = 196/355 (55.21%), Query Frame = 0
Query: 202 GKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTY 261
G +++A +F+ ++G V ++ LI Y K D K+ SM GL+PNL++Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 262 NAVIDACGKGVVEFGRVVE---IFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFS 321
N VI+ G+ GR+ E + EM R G D +TYN+ + + G + A + +
Sbjct: 279 NVVIN----GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 338
Query: 322 EMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAG 381
EM G+ + TY +L+ ++CK G M+ A E + +M + + PN TY+T+ DG+++ G
Sbjct: 339 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 398
Query: 382 RLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYN 441
+ +A + EM G V+YN L++ + G+ EDA+ V +M G+ DVV+Y+
Sbjct: 399 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 458
Query: 442 ALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRA 501
+L G+ + E RV +EM + P+ +TYS+LI + + +EA +++ E R
Sbjct: 459 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 518
Query: 502 GLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRST 554
GL D Y+ LINA C G ++ A+ L +EM+++G+ P+VVTY+ +I+ + +
Sbjct: 519 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7014307.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022953240.1 | 0.0e+00 | 98.85 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucur... | [more] |
XP_023547932.1 | 0.0e+00 | 98.51 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucur... | [more] |
XP_022991277.1 | 0.0e+00 | 98.17 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucur... | [more] |
XP_038897325.1 | 0.0e+00 | 92.36 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Benincasa ... | [more] |
Match Name | E-value | Identity | Description | |
Q9SIC9 | 1.1e-308 | 67.12 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
Q9S7Q2 | 3.3e-76 | 25.77 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
Q9LYZ9 | 3.3e-68 | 27.19 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9LFC5 | 7.1e-55 | 27.47 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
Q76C99 | 7.9e-54 | 32.56 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GMF8 | 0.0e+00 | 98.85 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cuc... | [more] |
A0A6J1JLC8 | 0.0e+00 | 98.17 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cuc... | [more] |
A0A0A0KB90 | 0.0e+00 | 91.22 | Pentatricopeptide repeat-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G... | [more] |
A0A1S3BSC2 | 0.0e+00 | 91.11 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Cucumis ... | [more] |
A0A6J1D2T9 | 0.0e+00 | 89.97 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Momordic... | [more] |