Carg07063 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07063
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PMR5N domain-containing protein
Location	Carg_Chr01: 3612267 .. 3615262 (+)
RNA-Seq Expression	Carg07063
Synteny	Carg07063

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGTGTTGATTGTGTTTGTTTCAGGTGGGATTATATGGAATCTGGAGGATCATATTACCAAGACATGGATCGGTTGGCTGCAATGGAGAAGGGTCTAAGAACATGGGCTGATTGGGTTGATAAGAACATTGATGTTACTACAACAAGGGTTTTCTTCCAAGCTATCTCTCCCACTCATTACAAGTAAGTCTTCTTTTTTTTTTCTCTGTCTTTATTGTTTTCCTCCATTATTGAATGTTGGCTTGGAGCCCTACAAATAATTTTCTCAGAGTAGATAATTACCATTTTAGCCCTCTTAGTTTTACGAGTCGAATAATTTCTAAGTTCAGTCCCTGAACTTTGGTTATCCGTTCAAATCTCACTGTAAATAATTACCTTTTTAACCCTTTTAGTTTTACGAGTGAGTAAATTACAAGTTTAGTCTCTAAATTTTGGTTAGATCTCACCGTAGATAATTACCATTTTAGCCCTTTTAGTTTTACGAGTCGAGTAAATTACAAGTTTAGTCTCTAAATCTTGGTTATCCCTTTAAACCTCACTGTAGATAATTACCGTTTTAGCTCTTTTAGTTTTATGAGTCGAATAAATTACAAGTTTGGTCCCTAAACTTTGGTTATCCCTTCAAATCTCACCGTTGATAAGTACCATTTTAACCCTGGTAGTTTTATGAGTTGAATAAATTACAAGTTCAGTCACTAAACTTTGGTTATCCCTTCCTATCTTACCATAGATAATTACCATTTTAGCCCTTTTAGTTTTACGAATGGAATAATTTTACAAATTTAGTCTCTAAACTTTTACATTTGTATCTATTTGGTTCTTCTGGTTATCCCTTTAGATCGCACGGTAGATAATTACCATTTTACCCCTTTTAGTTTTACTAGTTGAAAAAATTACAAATTTAGCCTCTAAACTTTTAGATTTCTATCTATTTGGTTCTTGAATTTTAAAAAGTGTCTAATAATAATAATAAATAAATCATAGAAATTATATAAAAAAACTTCGAACTTAAAGCATAATTCAACCAACTAAGTGATATATAGTTTGACGTTCTGAATTAAAAAAATAATTATATTTTAGCCTCTGAACTTTCAAGTTTATCCCATTTTTTAACCCCTCAATTTTCGAAGTGTCCATTTTGGTTAATGGGTTTTTAATTTTATTCCATCTTAGTCCATAAACTTTTAAAATGTCTAATTAAATAGACGTTTTAAAAGCGGAAGGACGAAAATGAGATTAAAAAAAATAAAAAGACCATTTTACCCCGAGGAGGAAAATATCTTACACAACTTTAACATAATCCAAACCTGTCGGTGGGACAGATCGATTTTGAGAATTATATATATAAACGTTTATATATATTTATTGTAAGATATTTTCAAGACATTTAAAAGGGAAATATAAATTGTAAATAAGGATGCTTCTTTGAAGCTTCCTGGTCCCACGTGTTGGGTTGTCTTAATTTCCTGAATTGAAAATGATATGAAATTAAAGCATCTTTCCAACATTATGTCTTATTCCCTGAATTTGGTAACATAAGTCATCTTAGGTTTTAGCTCTTATTTTATTTAATAAAGTATTAGTATGTGATTTGTTATCTCAAATGGTATCAGAGCGCTACGTTTTTCGATCTATTTAGATCATGTAGATCGGCCTATGATGTAGGCCCAACCAACTTCCATGGTCCTCTAGCAGATGTATTGGCACTGTAACAACGGGTGTAATACAATAATATATGTAGTAGATTACGAGAGTTAGATACTGGGTGATGTGCCAATGAGAAAGCTGAGCCCCAAAAAGGGATCGACACGAGGCGGTGTCCCAACAAGGACACTGGGTTCCGAAGGGGGTAGATTTGGGGGGTCACATATCGATTGGAGAATGGAACGAGTGTCAGCGAGGACGCTGGCCCCAAAGAGGGTGGATTGTGAGATCCCACATCATCAGTGGGGAGGAGAACAAAGCAGTCTTTATAAAAGTGTGAAAACCTCTCCAAATACGACAATATCTAGTGGTTGTGGGCTTGGATAGTTCCATTCATTGTTGTCATTAATGCCTAACTAATGATATCAAGATTTTTTTCTTCTTGACGTAGTCAATTCCCTTTCCCTCTTTGCAATACCACTGATTCTTTTCTGTCTGTTCATAGCATTGGTTTGAATGAACGGTTAAAATGTTGTATGCAACTAAACTTGTTCATGGTTGTGATTATCCGAACAGTCCATCCGAATGGAACACCGGGACAACTTCGACGATGACAACAACAAAGAATTGCTATGGCGAAACGACACCGATGGGGGGGATGACGTACCCGGGTGGGTACCCAATTCAAATGAGGGTTGTGGATGAAGTGCTAAATGACATGAGGAATCCAGTGTACTTGTTGGACATAACAATGCTATCTGAGCTAAGAAAAGATGGGCACCCTTCCATTTACAGTGGTGATTTGAGCCCTGAGCAAAGGGCTAACCCTGGTAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGTTACCTGATACTTGGAACCAATTATTTTACACTGCTTTGTTCTTTTAGATCATCAATCTTATTCTTCAATCATACTCAAATTTATTCTCTTCCCTCTCCTTTGATGTAATTCGTGGAGGAATATAGATTATTCGTAACGTAGGGGCACCATTACATTACAAAATAGTTTTACGTTCGTTGTACTTTACTTATCTGGTTCAATACGTCCTAAAGTTCTGTACCATATGGCTTGCCCAAGGTTGGGAAGCAACACTACAACATCCCATACTCAACAAGGTTCATGTTGCACGCCCGAAGGCACCTGGCAGAGAGGTTCATGTTGTATACTAACGAGGCTCATGTTGCATACTCAAAGGCACTTGACTCTGCCCCACCGTGCATGTTTCGTTGCTGTGTTACTGTCAAACACCCTCGACCTGAAATATTTATGGATTTATAAATTAAACGTTTAGGGTTTTATTAGACCAATCTTTAACTTT

mRNA sequence

ATGAACGGTGTTGATTGTGTTTGTTTCAGGTGGGATTATATGGAATCTGGAGGATCATATTACCAAGACATGGATCGGTTGGCTGCAATGGAGAAGGGTCTAAGAACATGGGCTGATTGGGTTGATAAGAACATTGATGTTACTACAACAAGGGTTTTCTTCCAAGCTATCTCTCCCACTCATTACAATCCATCCGAATGGAACACCGGGACAACTTCGACGATGACAACAACAAAGAATTGCTATGGCGAAACGACACCGATGGGGGGGATGACGTACCCGGGTGGGTACCCAATTCAAATGAGGGTTGTGGATGAAGTGCTAAATGACATGAGGAATCCAGTGTACTTGTTGGACATAACAATGCTATCTGAGCTAAGAAAAGATGGGCACCCTTCCATTTACAGTGGTGATTTGAGCCCTGAGCAAAGGGCTAACCCTGGTAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGTTACCTGATACTTGGAACCAATTATTTTACACTGCTTTGTTCTTTTAGATCATCAATCTTATTCTTCAATCATACTCAAATTTATTCTCTTCCCTCTCCTTTGATGTAATTCGTGGAGGAATATAGATTATTCGTAACGTAGGGGCACCATTACATTACAAAATAGTTTTACGTTCGTTGTACTTTACTTATCTGGTTCAATACGTCCTAAAGTTCTGTACCATATGGCTTGCCCAAGGTTGGGAAGCAACACTACAACATCCCATACTCAACAAGGTTCATGTTGCACGCCCGAAGGCACCTGGCAGAGAGGTTCATGTTGTATACTAACGAGGCTCATGTTGCATACTCAAAGGCACTTGACTCTGCCCCACCGTGCATGTTTCGTTGCTGTGTTACTGTCAAACACCCTCGACCTGAAATATTTATGGATTTATAAATTAAACGTTTAGGGTTTTATTAGACCAATCTTTAACTTT

Coding sequence (CDS)

ATGAACGGTGTTGATTGTGTTTGTTTCAGGTGGGATTATATGGAATCTGGAGGATCATATTACCAAGACATGGATCGGTTGGCTGCAATGGAGAAGGGTCTAAGAACATGGGCTGATTGGGTTGATAAGAACATTGATGTTACTACAACAAGGGTTTTCTTCCAAGCTATCTCTCCCACTCATTACAATCCATCCGAATGGAACACCGGGACAACTTCGACGATGACAACAACAAAGAATTGCTATGGCGAAACGACACCGATGGGGGGGATGACGTACCCGGGTGGGTACCCAATTCAAATGAGGGTTGTGGATGAAGTGCTAAATGACATGAGGAATCCAGTGTACTTGTTGGACATAACAATGCTATCTGAGCTAAGAAAAGATGGGCACCCTTCCATTTACAGTGGTGATTTGAGCCCTGAGCAAAGGGCTAACCCTGGTAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGTTACCTGATACTTGGAACCAATTATTTTACACTGCTTTGTTCTTTTAG

Protein sequence

MNGVDCVCFRWDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTGTTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF

Homology

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BLAST of Carg07063 vs. NCBI nr
Match: KAG7036996.1 (Protein trichome birefringence-like 45, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.3 bits (978), Expect = 4.4e-102
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MNGVDCVCFRWDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPT 60
           MNGVDCVCFRWDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPT
Sbjct: 1   MNGVDCVCFRWDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPT 60

Query: 61  HYNPSEWNTGTTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDI 120
           HYNPSEWNTGTTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDI
Sbjct: 61  HYNPSEWNTGTTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDI 120

Query: 121 TMLSELRKDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           TMLSELRKDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 121 TMLSELRKDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 175

[Close]

BLAST of Carg07063 vs. NCBI nr
Match: XP_023521759.1 (protein PMR5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 5.2e-95
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. NCBI nr
Match: XP_022949350.1 (protein PMR5-like [Cucurbita moschata])

HSP 1 Score: 357.8 bits (917), Expect = 5.2e-95
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. NCBI nr
Match: KAG6607318.1 (Protein PMR5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356.3 bits (913), Expect = 1.5e-94
Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDY+ESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYIESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. NCBI nr
Match: XP_022998581.1 (protein PMR5-like [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 2.6e-94
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTS MTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSMMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. ExPASy Swiss-Prot
Match: O80872 (Protein trichome birefringence-like 45 OS=Arabidopsis thaliana OX=3702 GN=TBL45 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.9e-57
Identity = 103/168 (61.31%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNT- 70
           W+ ME+GG YY DMDRL A+ KGL TW+ WV + I+   TRVFF ++SPTHYNP+EW + 
Sbjct: 231 WEQMETGGRYYGDMDRLVALRKGLGTWSSWVLRYINSPLTRVFFLSVSPTHYNPNEWTSR 290

Query: 71  GTTSTMTT-TKNCYGETTPMGGMTYP-GGYPIQMRVVDEVLNDMRNPVYLLDITMLSELR 130
             TST+T   K+CYG+TTP  G TYP   Y  Q +V+D+V+ +M++ V L+DITMLS LR
Sbjct: 291 SKTSTITQGGKSCYGQTTPFSGTTYPTSSYVNQKKVIDDVVKEMKSHVSLMDITMLSALR 350

Query: 131 KDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
            DGHPSIYSGDL+P  + NP RS+DCSHWCLPGLPDTWNQLFY AL +
Sbjct: 351 VDGHPSIYSGDLNPSLKRNPDRSSDCSHWCLPGLPDTWNQLFYAALLY 398

[Close]

BLAST of Carg07063 vs. ExPASy Swiss-Prot
Match: Q9LUZ6 (Protein PMR5 OS=Arabidopsis thaliana OX=3702 GN=PMR5 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.2e-55
Identity = 102/167 (61.08%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD ++SG SYYQDMDR  AMEK LRTWA WV+ ++D + T+V F +ISPTH NPS+W   
Sbjct: 239 WDLIQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDW--- 298

Query: 71  TTSTMTTTKNCYGETTPMGGMTYP-GGYPIQMR-VVDEVLNDMRNPVYLLDITMLSELRK 130
             S+ + +KNCYGET P+ G  YP   Y  Q+R V+ EVL+ M NP +LLDIT+LS LRK
Sbjct: 299 AASSSSGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRK 358

Query: 131 DGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           DGHPS+YSG +S  QR+ P +SADCSHWCLPGLPDTWNQL YT L +
Sbjct: 359 DGHPSVYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402

[Close]

BLAST of Carg07063 vs. ExPASy Swiss-Prot
Match: O22960 (Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 PE=2 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-46
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD++  G S  +DMDRL A  KGL TW  WVD+N++V+ TRVFFQ ISPTHY   EWN  
Sbjct: 238 WDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQTRVFFQGISPTHYMGREWN-- 297

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+ G TYPGG      +V  VL+ MR PVYLLDIT LS+LRKD 
Sbjct: 298 -----EPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVYLLDITTLSQLRKDA 357

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 358 HPSTYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 383

[Close]

BLAST of Carg07063 vs. ExPASy Swiss-Prot
Match: Q8VY22 (Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-46
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDY+  G S  +DM+RL A  KGL TWA WVD+N+D   TRVFFQ ISPTHY   EWN  
Sbjct: 233 WDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYEGREWN-- 292

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+GG +YP G P    VV +VL+ M+ PV LLDIT LS+LRKD 
Sbjct: 293 -----EPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDA 352

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 353 HPSSYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 378

[Close]

BLAST of Carg07063 vs. ExPASy Swiss-Prot
Match: Q67XC4 (Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 PE=2 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 83/163 (50.92%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYM  G   Y+DM+RL A  KGL TWA W++ NI  + T+VFFQ +SP HY+  EWN  
Sbjct: 216 WDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRTQVFFQGVSPVHYDGREWN-- 275

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K+C G+T P  G  YPGG P+   VV++VL+ +R PV+LLD+T LSE RKD 
Sbjct: 276 -----EPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHLLDLTTLSEYRKDA 335

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS+Y+G           +  DCSHWCLPGLPDTWN L Y++L
Sbjct: 336 HPSLYNG---------ISKDLDCSHWCLPGLPDTWNLLLYSSL 362

[Close]

BLAST of Carg07063 vs. ExPASy TrEMBL
Match: A0A6J1GCI1 (protein PMR5-like OS=Cucurbita moschata OX=3662 GN=LOC111452729 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.5e-95
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. ExPASy TrEMBL
Match: A0A6J1KAJ4 (protein PMR5-like OS=Cucurbita maxima OX=3661 GN=LOC111493169 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.2e-94
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTS MTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSMMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. ExPASy TrEMBL
Match: A0A6J1DD02 (protein PMR5 OS=Momordica charantia OX=3673 GN=LOC111018957 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.7e-88
Identity = 152/165 (92.12%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYY+DMDRLAAMEKGLRTWADWVDKNIDVT TRVFFQAISPTHYNPSEWNTG
Sbjct: 224 WDYMESGGSYYEDMDRLAAMEKGLRTWADWVDKNIDVTRTRVFFQAISPTHYNPSEWNTG 283

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           T ST T +KNCYGET PMGGMTYP GYP QMR+VDEV+ DMRNPVYLLDITMLSELRKDG
Sbjct: 284 TASTTTMSKNCYGETVPMGGMTYPAGYPEQMRIVDEVIRDMRNPVYLLDITMLSELRKDG 343

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 344 HPSIYSGDLSPEQRANPQRSADCSHWCLPGLPDTWNQLFYTALFF 388

[Close]

BLAST of Carg07063 vs. ExPASy TrEMBL
Match: A0A0A0M0U4 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532290 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.2e-86
Identity = 148/165 (89.70%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRL AMEK LRTWADWV+KNIDV+ TRVFFQAISPTHYNPSEWNTG
Sbjct: 226 WDYMESGGSYYQDMDRLGAMEKALRTWADWVEKNIDVSRTRVFFQAISPTHYNPSEWNTG 285

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           T S MT+TKNCYGET PMGG TYPGGYPIQMRVVDEV+ +MR PVYLLDITMLSELRKDG
Sbjct: 286 TASMMTSTKNCYGETAPMGGTTYPGGYPIQMRVVDEVIREMRKPVYLLDITMLSELRKDG 345

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDL+P+QRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 346 HPSIYSGDLNPQQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 390

[Close]

BLAST of Carg07063 vs. ExPASy TrEMBL
Match: A0A5D3BE55 (Protein PMR5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00890 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.9e-84
Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWN-- 70
           WDYMESGGSYYQDMDRL AMEK LRTWADWV+KNIDV+ TRVFFQAISPTHYNPSEWN  
Sbjct: 181 WDYMESGGSYYQDMDRLGAMEKALRTWADWVEKNIDVSRTRVFFQAISPTHYNPSEWNTG 240

Query: 71  TGTTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRK 130
           TGT S MT+TKNCYGET PMGG TYPG YPIQMRVVDEV+ +MR PVYLLDITMLSELRK
Sbjct: 241 TGTASMMTSTKNCYGETAPMGGTTYPGAYPIQMRVVDEVIREMRKPVYLLDITMLSELRK 300

Query: 131 DGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           DGHPSIYSGDL+P+QRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 301 DGHPSIYSGDLNPQQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 347

[Close]

BLAST of Carg07063 vs. TAIR 10
Match: AT2G30010.1 (TRICHOME BIREFRINGENCE-LIKE 45 )

HSP 1 Score: 221.1 bits (562), Expect = 7.1e-58
Identity = 103/168 (61.31%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNT- 70
           W+ ME+GG YY DMDRL A+ KGL TW+ WV + I+   TRVFF ++SPTHYNP+EW + 
Sbjct: 231 WEQMETGGRYYGDMDRLVALRKGLGTWSSWVLRYINSPLTRVFFLSVSPTHYNPNEWTSR 290

Query: 71  GTTSTMTT-TKNCYGETTPMGGMTYP-GGYPIQMRVVDEVLNDMRNPVYLLDITMLSELR 130
             TST+T   K+CYG+TTP  G TYP   Y  Q +V+D+V+ +M++ V L+DITMLS LR
Sbjct: 291 SKTSTITQGGKSCYGQTTPFSGTTYPTSSYVNQKKVIDDVVKEMKSHVSLMDITMLSALR 350

Query: 131 KDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
            DGHPSIYSGDL+P  + NP RS+DCSHWCLPGLPDTWNQLFY AL +
Sbjct: 351 VDGHPSIYSGDLNPSLKRNPDRSSDCSHWCLPGLPDTWNQLFYAALLY 398

[Close]

BLAST of Carg07063 vs. TAIR 10
Match: AT5G58600.1 (Plant protein of unknown function (DUF828) )

HSP 1 Score: 216.1 bits (549), Expect = 2.3e-56
Identity = 102/167 (61.08%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD ++SG SYYQDMDR  AMEK LRTWA WV+ ++D + T+V F +ISPTH NPS+W   
Sbjct: 239 WDLIQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDW--- 298

Query: 71  TTSTMTTTKNCYGETTPMGGMTYP-GGYPIQMR-VVDEVLNDMRNPVYLLDITMLSELRK 130
             S+ + +KNCYGET P+ G  YP   Y  Q+R V+ EVL+ M NP +LLDIT+LS LRK
Sbjct: 299 AASSSSGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRK 358

Query: 131 DGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           DGHPS+YSG +S  QR+ P +SADCSHWCLPGLPDTWNQL YT L +
Sbjct: 359 DGHPSVYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402

[Close]

BLAST of Carg07063 vs. TAIR 10
Match: AT1G29050.1 (TRICHOME BIREFRINGENCE-LIKE 38 )

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-47
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDY+  G S  +DM+RL A  KGL TWA WVD+N+D   TRVFFQ ISPTHY   EWN  
Sbjct: 233 WDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYEGREWN-- 292

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+GG +YP G P    VV +VL+ M+ PV LLDIT LS+LRKD 
Sbjct: 293 -----EPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDA 352

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 353 HPSSYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 378

[Close]

BLAST of Carg07063 vs. TAIR 10
Match: AT2G34070.1 (TRICHOME BIREFRINGENCE-LIKE 37 )

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-47
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD++  G S  +DMDRL A  KGL TW  WVD+N++V+ TRVFFQ ISPTHY   EWN  
Sbjct: 238 WDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQTRVFFQGISPTHYMGREWN-- 297

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+ G TYPGG      +V  VL+ MR PVYLLDIT LS+LRKD 
Sbjct: 298 -----EPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVYLLDITTLSQLRKDA 357

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 358 HPSTYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 383

[Close]

BLAST of Carg07063 vs. TAIR 10
Match: AT2G31110.2 (Plant protein of unknown function (DUF828) )

HSP 1 Score: 177.6 bits (449), Expect = 9.0e-45
Identity = 83/163 (50.92%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYM  G   Y+DM+RL A  KGL TWA W++ NI  + T+VFFQ +SP HY+  EWN  
Sbjct: 216 WDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRTQVFFQGVSPVHYDGREWN-- 275

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K+C G+T P  G  YPGG P+   VV++VL+ +R PV+LLD+T LSE RKD 
Sbjct: 276 -----EPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHLLDLTTLSEYRKDA 335

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS+Y+G           +  DCSHWCLPGLPDTWN L Y++L
Sbjct: 336 HPSLYNG---------ISKDLDCSHWCLPGLPDTWNLLLYSSL 362

The following BLAST results are available for this feature:

BLAST of Carg07063 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036996.1	4.4e-102	100.00	Protein trichome birefringence-like 45, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_023521759.1	5.2e-95	100.00	protein PMR5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949350.1	5.2e-95	100.00	protein PMR5-like [Cucurbita moschata]	[more]
KAG6607318.1	1.5e-94	99.39	Protein PMR5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022998581.1	2.6e-94	99.39	protein PMR5-like [Cucurbita maxima]	[more]

BLAST of Carg07063 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80872	9.9e-57	61.31	Protein trichome birefringence-like 45 OS=Arabidopsis thaliana OX=3702 GN=TBL45 ...	[more]
Q9LUZ6	3.2e-55	61.08	Protein PMR5 OS=Arabidopsis thaliana OX=3702 GN=PMR5 PE=2 SV=1	[more]
O22960	2.7e-46	55.21	Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 ...	[more]
Q8VY22	2.7e-46	55.21	Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 ...	[more]
Q67XC4	1.3e-43	50.92	Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 ...	[more]

BLAST of Carg07063 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCI1	2.5e-95	100.00	protein PMR5-like OS=Cucurbita moschata OX=3662 GN=LOC111452729 PE=3 SV=1	[more]
A0A6J1KAJ4	1.2e-94	99.39	protein PMR5-like OS=Cucurbita maxima OX=3661 GN=LOC111493169 PE=3 SV=1	[more]
A0A6J1DD02	8.7e-88	92.12	protein PMR5 OS=Momordica charantia OX=3673 GN=LOC111018957 PE=3 SV=1	[more]
A0A0A0M0U4	6.2e-86	89.70	PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532290 PE=3 ...	[more]
A0A5D3BE55	9.9e-84	88.02	Protein PMR5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00...	[more]

BLAST of Carg07063 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30010.1	7.1e-58	61.31	TRICHOME BIREFRINGENCE-LIKE 45	[more]
AT5G58600.1	2.3e-56	61.08	Plant protein of unknown function (DUF828)	[more]
AT1G29050.1	1.9e-47	55.21	TRICHOME BIREFRINGENCE-LIKE 38	[more]
AT2G34070.1	1.9e-47	55.21	TRICHOME BIREFRINGENCE-LIKE 37	[more]
AT2G31110.2	9.0e-45	50.92	Plant protein of unknown function (DUF828)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 10..171 e-value: 9.7E-51 score: 173.2
IPR029962	Trichome birefringence-like family	PANTHER	PTHR32285	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	coord: 10..175
IPR029981	PMR5	PANTHER	PTHR32285:SF14	PROTEIN PMR5	coord: 10..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07063-RA	Carg07063-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0016413	O-acetyltransferase activity