Carg07060 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07060
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ran-binding protein 1
Location	Carg_Chr01: 3629907 .. 3636357 (+)
RNA-Seq Expression	Carg07060
Synteny	Carg07060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCACTCATTTTTCCACTTCCTTCTCCCACATATATAAACCCTAGTTTCTCCGCCCGCAACCCAATTCCGATCCGTTTTTTCATCGTTCTTCTACGTTCTTAATCAAACCCTAAACCCTCTCCCATGGCGAGTTCCGATACCGAACGCAGAGAAGATGAGGAGGCTCCGGCGGCAGAGGATGAAGACACTGGAGCTCAAGTCGCCCCAATCGTCAAGTTGGAAGCGGTAGCCGTCACTACTGGTGAAGAAAACGAGGACGTTATTATTGATCTGTATGCCATTTGCCATTTACTTATTTATCTGATCTCCTCAATCTAGGTTTTGGATTTTATGGTTTAATCGTATTTGTTGCTTTAGAAAGTCCAAACTCTACCGATTTGATAAAGAAGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTTAAGTTTTTGAAACACAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGGCAATCTAAGACCCTCAAGATCTGCGCTAACCATCTTGGTTCGATCTCAACTCTCTACCTCGTATATCAAACTCCTTTGAGTTCTTGTTCTTTTTGTTGCTTTCTTGATTTTGATTTAGTTCTTGTATTTTATCGTTTGATTTGTCGTGATTGTAGTTCTTCCATCAATGTCGGTTCAAGAACACGCTGGTAATGATAAGTCTTGTGTGTGGCATGCGCCTGACTATGCGGATGGTGAATTGAAAGATGAGCTGTTTTGCATCAGATTCCCATCTATTGAGAGTGAGTTCAACTCCATATATTTTTTTTTCTCAAGTCTTGTTTGTAGGTTGACTTTTGATATATATTGATATTTAGTAGTTGGCGGTATTAGTATCAAAGATGATTCTTATATCATTTCATTTTTTTGTCTTTTTCTCCCTTCTGTGAAGTACTCTGTTGGGGCGGTCTACTTGTGTCTGGTTTGTTAATTTAACTCAAAATTGTCTTGAGTATCACTAGTATAATTCTTTTCACCTGCAATATTATTCTTTCTAGTTGTTTCTGGTTTGGCTGTGCTGGTTTGTACAGTTTGTCATCATAAGATATTATAGAACAATGGACTATCACGATATGTGTGAGATCCCACATCAATTGGAGAGAGGAACGAGTGCCCGTGAGGATGTTGGGTCCCGAAGGGGGTGGATTGTGAGATCCCATATCAATTTAAGAGGGGCACAAGTGCCAGTGTGGATGCTAGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACGTTGGTTGGAGGGAGAATGAAACATTCTTTATAAGGTTGTGGAAACCTCTCCCGAGCAGACACATTTCAAAAACCTTGTGGGGAAGCCCGAAAGGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGTTTGGGCTTGGGCTTAGGCTTAGGCTGATACAATATGGTTTTAAGATTATGGTTTTAAGATTTTAAGATTTTAAGATTTTAAGATGAATGTTCTCCTGGCACTTCATGTTAATTTTTGATTCTGTTAAAGGTTAGAACATGAATTTGTTCTTAAAATCCACACTATTGTTCTAATACGTTCATAATGGTAACTTATCCATGAAACTTTTACTGGTCTGCTTATTCTTACTGATATTGACTCTAACTAAGACTTTTTATTTTCCCATTTTCATTAACATTTGTTTTTTCTATTAAAATATGGGAAGTTCTTTATCCATACGTCTTCTCTGTTATTCTACATAGTTTCTTCAGTTATGTAATTCAGACAAATTTGATCAGCTGCGGTGGTAGTGGCAGAGTCAGAGGTTGGTGGCTGAAAAGAGGAAGAATAGTATAGAATTTCAGTTATACTTAATGAGGGTTTACAAATAAAATTTGATAGAAAAGCAGGTGAAAAGGTGTGTGGCTTCATTGGTGAATAGAGAGCAAAAAGAGGAAGTGGATTCAGTTATAATTTTATTTTAGAGGCTTTTAGTAATGAGAAGTAATAGAACGGTTGAAGAGATGAAGGGTACAGATAGAAATTTCCAGGTCATAATTATCAGTGCTTTTTGTTGGTGTATACTGGATACATCGGATATGGTAGGGGTCTTCCTTACATGCAGTGGTATGGTAGCTAAGATGGTTAGAATTTTGTTTAGATAAACTTAAGATAAATTAATGTTACTGGGATTCTCGCGTTAATTTGTATGACTGGTTTATATTATTACTCAGTTACTCTTCATCATAAGCTTTCCATTGTGTTTTGAATGAATATCAGTTCAAATTTATCAAGGAATTAGGCATCCTAACTCTATAAGATAGGAAACCCTGGATAAAAATTAAGGTTTCTTTCGTTTCTTTTCTTCTCTGTTCTTGTCCTTGGATGGTGAGCAATGAAGTCCATTGAACTAATTTAAGCAGCTTCTCTGCCATGGCTTCATCCAATGAAACAACAAAGGATATTGGATTTTAGTTTGTGGCTCATATTTGACGTGAAGCATGGGGATAAGCATGTTGTCAGCTTTGATTTACAACATCACTAAATGAAACACTTGGCAATTCTTAGTGCTTTGACATGCTGCACATTATTAGTGTAATGTTTACTTTTCTATCTCACAGTTCTTTAGCTCATTTTATTACTTTTTCATTCCTTTTTAATTTCTCTTTTGTGGGGTAATTTAGTGTAAAAAGATATTCAATTTTCTGGTTTTGGAACTTATGTTTGCCATCTCTAGACATTATTAATTTTATCCAATCCTCCCAAACTGTGTAGCATGTTTTTTGGGTAGGTTTGAAATCACAAACCAGTAGAAATTCCTGGACTTGCATGACCATCATGCTTGTGATCCATCCATCCAGCATAGATAGAGCTTTTATAGAATGTTTATCTCATCCGTTTAGTACTTCATTAAGATAGTTTATTGAATTGTTGTGTGGGTATTATCAGACTGCAAAACCTTCATGGAGACATTCCAAGAAGTTGCAGAGTCCCAAACCAAGAAAGAGGAGAATGAAGATGCATCTGCAGCAGCTGATCAACTTGAAAAATTAAAGGTTGAAGACAAAAAGAAGGAAGGTGAAGATAAAGCGGAAGACAAAGCTGAAGATAAAGCTGCAGAGAAAGAGAAAGAGTAATTAGGAGGCTGTTTCCCCTGTGTGAGATACTAGAAGAAGAAGATACACAATACTCTAAGAAAAAGATGGAAGAGGTTTTGTTGATCTATGACGCCCTTGCTTAATTATCTAATGATATCAAGTTTTGGGCTTCCGACTTACATTTGCATTATTACTATTTAAGTTCTTTTCTTTCTTAAAAAAAAATAATGTTTCTTGTGTTTTCTTGTCCTTGTCCTGCCTGGGTCCTGCCTGCACTACCATAGTTCAACTGTCATAAAACATATGCCATATGCGTATGTGTATCTTTGATGAAGAGGTTAGCATCGAGACATAGCTTCATACTCATATTTTTAGGAAACATGGTGTTTAGCTCCGAAGAGCTAACTCGATCAAATCCTTATTTGGTTGCTTGCTTAATTCATTAGAAAGGTCATTCTCTTAAAATAATTTAGTTACATATATAATATATCTTTTATTTTTCTATCTCACATATAAATTTGATTATTTGTATAATATTTAATATTAAAATATATACTTTTGTATACATAAGCATAAAAAAAAGATTAAAAAACTATTATTTTAGATTTTATTTCATAGAAATATAACAAAAAAAAAAATATTTTAATTAAAAAAATAAAAAATGCATCCAATATAAAGCTTTATTTTTTATAATTTGAGCATTTATTACTAATAATTCAACAACATTGAAATTATATTGTAAATAGTTGAAATTATTATTACAGAATTAATAATTGAAATTATACTTTTTAATTACGTTTTTGTGATATTTTATTTATTTAGAAAGATAATTGTGAAGAGGGGAGGGTTCTTCCTTCTCATTCTCGCTCATTTTATTTCTCGATATAAAAACCCTAATTTCCACACCTACTCTTCCATAGCTTTCCTCCAAATTCCGATCCATTTCTGCATCATCAAACCTTCATTTATGGCGAGCACAGATCCCGAACGCCGAGAGGACGAGGATGCTCCTGCTGGAGATGATGAAGACACTGGAGCTCAAGTTGCCCCGATCGTCAAGTTGGAGGAGGTTGCCGTCACCACCGGTGAAGAAGATGAGGACGCCATTCTCGATCTGTACGATTTTCTCTGTACTTCTTTCTCTGTATCTTGTTTTTCTCAATCTAGGCTTTGAGTCATGAGTGTGATTTGTTTTTGTGCGGATTATTCATGATTATTTTAGGAAGGCGAAACTGTACCGATTCGATAAGGATGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTCAAGTTTTTGAAACATAAGAATACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCCAATCATCTTGGTTTGTTCTTGATTATTCACTCATTATTTGCGTACAATTGAGTTCCCTTGAGTTCTTCTGTTTATTGTTTGATTGTTGTGCTTTTGTAGTGATTTCGTCAATGACGGTTCAAGAACACGCTGGAAATGAGAAATCATGCGTGTGGCATGCCGCTGACTTTGCTGATGGCGAATTGAAAAATGAGCTTTTCTGTATTAGATTCCCATCTATTGAGAGTGAGTACAACTTCGTTATTCTTTTTCCCTGGAATTCGGCTGTATGGTGAACTTGGCTGATGAGTTTTTTTGATCCTTTTGATCTATGATAGCGTTGGTAATATCAAAAGACCATAGATGTTCTTTGAGCCCAGAAATTGTGGTCATTTCCTTCTCCGTAAATATCTCCTAAATTAGATCAAGTACTAGCTCCAGTCTATTCACCGATAGAGTCGTTCGTTTTGTGCACCCAAATGGCTTCATAGAATTTATGAATAGAATCTGTAGTAAGATTCGGTCATTTTCGTTGGATAATTTTGTCAGTAGGACTTACTTTTTTTTACTGCATCAAAAAGAGGTGTTGAATGAGATTCCCCTAATAAGATTTTATTTTAAAAAATGGGGGAAAAGGAGAGTGGTTTTAATGGCGAATAGAGAAAATTTTGGCGGTGGCAAAGTAGGGGAGAAGTGGGAAAAGGGGCGGAAGAACTGAAAATTTATTTTAGGGCATATAAAGATAAAATTTAGATGCGATCGACTACTTTGCATGAGACGTACTTATAAATCTGATTTCATTTGGATGTTCATAATTCTATTGTTTTTAACTGTTTTAGACCAAGTAAAGAAGCTCATTACATTATAAATCAAGTTTTCTTACATCTAATTCGACTGCCTTGGATTTATAATTCTAAATCGTTTCTCTCCTGTTTCAAGAATGATCCATTTCCATTCGTTATAATCTTTTGTTGATGTTTCTTCAACGTACGTCTGTCTGTCAAATTTACCTTAGAATTAGGTTATTTTTCATTTCCTCAATAAGTATGAGCCTTGGATAAATGATAATCAAGGTTTCTTCTTTTTTGTTTCTCTTTTCGGGGATGGTGTGTTAGAACTCCTTTCATTATATGTCTTAAGTTAAATGTTTAACTCCTTTCGTTTCTCTTTTCAAGTTAAATGTCTTAAGGTAACCTTTCATTCATTTGTGTTTTTCGTAATCACTATATTATTAATCAACAAGAATTTGTTTCTGCTGATAAATTCTTTTAGTTTTAGTTTCTTAAGTTTTATAATTATTTTCTTACTCTATTTCAGATTATTAAACATTCTACTTATAAAGTGTGGAGACAGGCATGTTTGCTTGGCGCCTGAGATTGTAGAGATTCTCAATTGCATTTTTAGATTTAAACGCTTGGACACTATGTATTACTTGCTTGGTCCTTAAACGTATTTTATCTTTCCTTTTTTTTTTTTAACTAATTTTTACCTCTTTTCTCAACTTCTAGGGTCGATTACTCTTTTTCCCCCTTTTTCTGGTTTAGGCAGTCATTTTTATCATTTCTTGATTTGCGTTATTTCCTTTATTCCTCCCGAACTGTTCGGTGCATCTTTGGAGTGTGTCTAGGTATTAAAAATGTAAAAATTCCTGCACTTGTGTGTATACTTGATTGAACAAGATTTCTAGAGCATTGTTTTGTGAATGTTCCATCTTTTCATTTTTGTTCAATCGTAAGATAAATATTTATTAATTATGCTAGTTTGTTTATTTTTTTTTTTTTTTTCCTGCTAACAAGTATTCTCTTTGCTTCAGACTGCAAAACATTCAAGGAAACATTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGATGAAAATAAAGATGCATCAGCAGCAGCTGGATTACTTGAGAAATTGAGTGTTGAAGAAAAGAAAGGTGAAGAAGATAAAGCTGGAGACACACCTGCCAAAACCAAGGAAGAGGATGAACCCAAGGGTGAGGCAGAAAAGAAAGCAGATGCAGAGAAGAAGAATGATGAGTAGCCTGATTTGGCACTCT

mRNA sequence

TTCACTCATTTTTCCACTTCCTTCTCCCACATATATAAACCCTAGTTTCTCCGCCCGCAACCCAATTCCGATCCGTTTTTTCATCGTTCTTCTACGTTCTTAATCAAACCCTAAACCCTCTCCCATGGCGAGTTCCGATACCGAACGCAGAGAAGATGAGGAGGCTCCGGCGGCAGAGGATGAAGACACTGGAGCTCAAGTCGCCCCAATCGTCAAGTTGGAAGCGGTAGCCGTCACTACTGGTGAAGAAAACGAGGACGTTATTATTGATCTAAAGTCCAAACTCTACCGATTTGATAAAGAAGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTTAAGTTTTTGAAACACAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGGCAATCTAAGACCCTCAAGATCTGCGCTAACCATCTTGTTCTTCCATCAATGTCGGTTCAAGAACACGCTGGTAATGATAAGTCTTGTGTGTGGCATGCGCCTGACTATGCGGATGGTGAATTGAAAGATGAGCTGTTTTGCATCAGATTCCCATCTATTGAGAACTGCAAAACCTTCATGGAGACATTCCAAGAAGTTGCAGAGTCCCAAACCAAGAAAGAGGAGAATGAAGATGCATCTGCAGCAGCTGATCAACTTGAAAAATTAAAGGTTGAAGACAAAAAGAAGGAAGGTGAAGATAAAGCGGAAGACAAAGCTGAAGATAAAGCTGCAGAGAAAGAGAAAGACACAGATCCCGAACGCCGAGAGGACGAGGATGCTCCTGCTGGAGATGATGAAGACACTGGAGCTCAAGTTGCCCCGATCGTCAAGTTGGAGGAGGTTGCCGTCACCACCGGTGAAGAAGATGAGGACGCCATTCTCGATCTGAAGGCGAAACTGTACCGATTCGATAAGGATGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTCAAGTTTTTGAAACATAAGAATACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCCAATCATCTTGTGATTTCGTCAATGACGGTTCAAGAACACGCTGGAAATGAGAAATCATGCGTGTGGCATGCCGCTGACTTTGCTGATGGCGAATTGAAAAATGAGCTTTTCTGTATTAGATTCCCATCTATTGAGAACTGCAAAACATTCAAGGAAACATTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGATGAAAATAAAGATGCATCAGCAGCAGCTGGATTACTTGAGAAATTGAGTGTTGAAGAAAAGAAAGGTGAAGAAGATAAAGCTGGAGACACACCTGCCAAAACCAAGGAAGAGGATGAACCCAAGGGTGAGGCAGAAAAGAAAGCAGATGCAGAGAAGAAGAATGATGAGTAGCCTGATTTGGCACTCT

Coding sequence (CDS)

ATGGCGAGTTCCGATACCGAACGCAGAGAAGATGAGGAGGCTCCGGCGGCAGAGGATGAAGACACTGGAGCTCAAGTCGCCCCAATCGTCAAGTTGGAAGCGGTAGCCGTCACTACTGGTGAAGAAAACGAGGACGTTATTATTGATCTAAAGTCCAAACTCTACCGATTTGATAAAGAAGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTTAAGTTTTTGAAACACAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGGCAATCTAAGACCCTCAAGATCTGCGCTAACCATCTTGTTCTTCCATCAATGTCGGTTCAAGAACACGCTGGTAATGATAAGTCTTGTGTGTGGCATGCGCCTGACTATGCGGATGGTGAATTGAAAGATGAGCTGTTTTGCATCAGATTCCCATCTATTGAGAACTGCAAAACCTTCATGGAGACATTCCAAGAAGTTGCAGAGTCCCAAACCAAGAAAGAGGAGAATGAAGATGCATCTGCAGCAGCTGATCAACTTGAAAAATTAAAGGTTGAAGACAAAAAGAAGGAAGGTGAAGATAAAGCGGAAGACAAAGCTGAAGATAAAGCTGCAGAGAAAGAGAAAGACACAGATCCCGAACGCCGAGAGGACGAGGATGCTCCTGCTGGAGATGATGAAGACACTGGAGCTCAAGTTGCCCCGATCGTCAAGTTGGAGGAGGTTGCCGTCACCACCGGTGAAGAAGATGAGGACGCCATTCTCGATCTGAAGGCGAAACTGTACCGATTCGATAAGGATGGAAACCAATGGAAGGAGAGAGGTGCTGGTACTGTCAAGTTTTTGAAACATAAGAATACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCCAATCATCTTGTGATTTCGTCAATGACGGTTCAAGAACACGCTGGAAATGAGAAATCATGCGTGTGGCATGCCGCTGACTTTGCTGATGGCGAATTGAAAAATGAGCTTTTCTGTATTAGATTCCCATCTATTGAGAACTGCAAAACATTCAAGGAAACATTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGATGAAAATAAAGATGCATCAGCAGCAGCTGGATTACTTGAGAAATTGAGTGTTGAAGAAAAGAAAGGTGAAGAAGATAAAGCTGGAGACACACCTGCCAAAACCAAGGAAGAGGATGAACCCAAGGGTGAGGCAGAAAAGAAAGCAGATGCAGAGAAGAAGAATGATGAGTAG

Protein sequence

MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKEGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWHAPDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVEDKKKEGEDKAEDKAEDKAAEKEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE

Homology

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BLAST of Carg07060 vs. NCBI nr
Match: KAG7036999.1 (Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 785.4 bits (2027), Expect = 2.4e-223
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKE 60
           MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKE
Sbjct: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKE 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120

Query: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180
           APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE
Sbjct: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180

Query: 181 DKKKEGEDKAEDKAEDKAAEKEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTT 240
           DKKKEGEDKAEDKAEDKAAEKEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTT
Sbjct: 181 DKKKEGEDKAEDKAEDKAAEKEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTT 240

Query: 241 GEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANH 300
           GEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANH
Sbjct: 241 GEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANH 300

Query: 301 LVISSMTVQEHAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQ 360
           LVISSMTVQEHAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQ
Sbjct: 301 LVISSMTVQEHAGNEKSCVWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQ 360

Query: 361 KKDENKDASAAAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
           KKDENKDASAAAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE
Sbjct: 361 KKDENKDASAAAGLLEKLSVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 419

[Close]

BLAST of Carg07060 vs. NCBI nr
Match: XP_022949353.1 (ran-binding protein 1 homolog a-like [Cucurbita moschata] >XP_023523176.1 ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo] >KAG6607321.1 Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406.4 bits (1043), Expect = 3.0e-109
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 205 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 264
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 265 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 324
           WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 325 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 384
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 385 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
           GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 218

[Close]

BLAST of Carg07060 vs. NCBI nr
Match: XP_022998583.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 403.3 bits (1035), Expect = 2.6e-108
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 205 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 264
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 265 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 324
           WKERGAGTVKFLKHKN GKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNNGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 325 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 384
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 385 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
           GEEDKAGDTPAKTKEEDEPKGEAEKK+DAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKSDAEKKNDE 218

[Close]

BLAST of Carg07060 vs. NCBI nr
Match: XP_022949354.1 (ran-binding protein 1 homolog b-like [Cucurbita moschata])

HSP 1 Score: 380.2 bits (975), Expect = 2.3e-101
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKE 60
           MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVI+DLKSKLYRFDKE
Sbjct: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKE 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120

Query: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180
           APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE
Sbjct: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180

Query: 181 DKKKEGEDKAEDKAEDKAAEKE 203
           DKKKEGEDKAEDKAEDKAAEKE
Sbjct: 181 DKKKEGEDKAEDKAEDKAAEKE 202

[Close]

BLAST of Carg07060 vs. NCBI nr
Match: XP_022998584.1 (ran-binding protein 1 homolog b-like [Cucurbita maxima])

HSP 1 Score: 374.4 bits (960), Expect = 1.3e-99
Identity = 198/202 (98.02%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKE 60
           MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVI+DLKSKLYRFDKE
Sbjct: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKE 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120

Query: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180
           APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAAD LEKLKVE
Sbjct: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADLLEKLKVE 180

Query: 181 DKKKEGEDKAEDKAEDKAAEKE 203
           +KK+EGEDKAEDKAEDKAAEKE
Sbjct: 181 EKKEEGEDKAEDKAEDKAAEKE 202

[Close]

BLAST of Carg07060 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.6e-76
Identity = 158/220 (71.82%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 204 DTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGN 263
           + + E R++E+A A +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+KLYRFDKD N
Sbjct: 5   EPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDAN 64

Query: 264 QWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAA 323
           QWKERGAGTVKFLKHKNTGK+RLVMRQSKTLKICANH V S M+VQEH GNEKSCVWHA 
Sbjct: 65  QWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHAR 124

Query: 324 DFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEK 383
           DFADGELK+ELFCIRF SIENCKTF + F+E+AES+++K+E+KDA+  AGLLEKL+VEE 
Sbjct: 125 DFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEET 184

Query: 384 KGEED---KAGDTPAKT--KEEDEPKGEAEKKADAEKKND 419
           K EE    KA +T AKT  K E++ + EAEK  +A+K  +
Sbjct: 185 KTEEKTEAKAVET-AKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Carg07060 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 3.4e-71
Identity = 145/216 (67.13%), Postives = 177/216 (81.94%), Query Frame = 0


Query: 199 AEKEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF 258
           A    + + E R++E+  A +DEDTGAQVAPIV+LEEVAVTTGEEDED ILDLK+KLYRF
Sbjct: 2   ASISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRF 61

Query: 259 DKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSC 318
           DKDG+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV S M+VQEHAGN+KSC
Sbjct: 62  DKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSC 121

Query: 319 VWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKL 378
           VWHA DF+DGELK+ELFCIRF S+ENCK F + F+E+AES+++K+E+KDAS  AGLLEKL
Sbjct: 122 VWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKL 181

Query: 379 SVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAE 415
           +VEEK+ E+      P +  EE++     E+K   E
Sbjct: 182 TVEEKESEK-----KPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Carg07060 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 6.5e-70
Identity = 151/216 (69.91%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 205 TDPERREDED-APAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGN 264
           T+PER   ED     +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+K+YRFDK+GN
Sbjct: 4   TEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGN 63

Query: 265 QWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAA 324
           QWKERGAGTVK LKHK TGKVRLVMRQSKTLKICANHL+ S M+VQEH+GNEKSC+WHA 
Sbjct: 64  QWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHAT 123

Query: 325 DFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEK 384
           DF+DGELK+ELFCIRF SIENCKTF E F EIAESQQ   E+     AAGL+E LSVEE 
Sbjct: 124 DFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEEN 183

Query: 385 KGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
             EE       AK  EE EP  E +K+   EK  +E
Sbjct: 184 ISEE------KAKEAEEKEPAKE-DKETKKEKVEEE 212

[Close]

BLAST of Carg07060 vs. ExPASy Swiss-Prot
Match: Q9ERU9 (E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-44
Identity = 137/457 (29.98%), Postives = 217/457 (47.48%), Query Frame = 0


Query: 2    ASSDTERREDEEAPAAEDEDTGAQVAPIVKL-EAVAVTTGEENEDVIIDLKSKLYRFDKE 61
            A++ ++  +D++A   ED D      P+V++ E V + TGEE+E V+   + KL+RFD E
Sbjct: 1827 ANTSSDLEKDDDAYKTEDSD-DIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAE 1886

Query: 62   GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 121
             +QWKERG G +K LK++  GK+R++MR+ + LK+CANH +  +M+++  +G+D++ +W 
Sbjct: 1887 ISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWL 1946

Query: 122  APDYADGELKDELFCIRFPSIENCKTFMETFQE--------------------------- 181
            A D++DG+ K E    +F + E  + F + F+E                           
Sbjct: 1947 ASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKLIQ 2006

Query: 182  ---------------VAESQTKKEENEDASAAADQLEKLKVEDKKK----------EGED 241
                           +   Q K  + E+AS+ AD         K+           +  D
Sbjct: 2007 RAEEMKSGLKDFKTFLTNDQVKVTDEENASSGADAPSASDTTAKQNPDNTGPALEWDNYD 2066

Query: 242  KAEDKAEDKAAEK----------------------------------EKDTDPERREDED 301
              ED  +D  +                                         P +     
Sbjct: 2067 LREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSG 2126

Query: 302  APAGDDEDT---------GAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQ 361
            A  G DE++         G    P+V L + V V++GEE+E  +   +AKLYR+DKD  Q
Sbjct: 2127 ASVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQ 2186

[Close]

BLAST of Carg07060 vs. ExPASy Swiss-Prot
Match: P49792 (E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 3.0e-43
Identity = 137/457 (29.98%), Postives = 218/457 (47.70%), Query Frame = 0


Query: 2    ASSDTERREDEEAPAAEDEDTGAQVAPIVKL-EAVAVTTGEENEDVIIDLKSKLYRFDKE 61
            A++  +  +D++A   ED D      P+V++ E V + TGEE+E V+   + KL+RFD E
Sbjct: 1990 ANTSGDFEKDDDAYKTEDSD-DIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAE 2049

Query: 62   GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 121
             +QWKERG G +K LK++  GK+R++MR+ + LK+CANH +  +M+++  +G+D++ +W 
Sbjct: 2050 VSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWL 2109

Query: 122  APDYADGELKDELFCIRFPSIENCKTFMETFQE--------------------------- 181
            A D++DG+ K E    +F + E  + F + F+E                           
Sbjct: 2110 ASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKLIQ 2169

Query: 182  ---------------VAESQTKKEENED------ASAAADQLEKLKVEDK----KKEGED 241
                           +   QTK  E E+      A+ A+D   K   E+     + +  D
Sbjct: 2170 RAEEMKSGLKDFKTFLTNDQTKVTEEENKGSGTGAAGASDTTIKPNPENTGPTLEWDNYD 2229

Query: 242  KAEDKAEDKAAEK----------------------------------EKDTDPERREDED 301
              ED  +D  +                                         P +     
Sbjct: 2230 LREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSG 2289

Query: 302  APAGDDEDT---------GAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQ 361
               G DE++         G    P+V L + V V++GEE+E  +   +AKLYR+DKD  Q
Sbjct: 2290 TSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQ 2349

[Close]

BLAST of Carg07060 vs. ExPASy TrEMBL
Match: A0A6J1GBT0 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111452731 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 205 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 264
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 265 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 324
           WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 325 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 384
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 385 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
           GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 218

[Close]

BLAST of Carg07060 vs. ExPASy TrEMBL
Match: A0A6J1KH56 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111493171 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 205 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 264
           TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ
Sbjct: 4   TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 63

Query: 265 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 324
           WKERGAGTVKFLKHKN GKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD
Sbjct: 64  WKERGAGTVKFLKHKNNGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 123

Query: 325 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 384
           FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK
Sbjct: 124 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 183

Query: 385 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
           GEEDKAGDTPAKTKEEDEPKGEAEKK+DAEKKNDE
Sbjct: 184 GEEDKAGDTPAKTKEEDEPKGEAEKKSDAEKKNDE 218

[Close]

BLAST of Carg07060 vs. ExPASy TrEMBL
Match: A0A6J1GCK9 (ran-binding protein 1 homolog b-like OS=Cucurbita moschata OX=3662 GN=LOC111452732 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKE 60
           MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVI+DLKSKLYRFDKE
Sbjct: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKE 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120

Query: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180
           APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE
Sbjct: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180

Query: 181 DKKKEGEDKAEDKAEDKAAEKE 203
           DKKKEGEDKAEDKAEDKAAEKE
Sbjct: 181 DKKKEGEDKAEDKAEDKAAEKE 202

[Close]

BLAST of Carg07060 vs. ExPASy TrEMBL
Match: A0A6J1KEQ3 (ran-binding protein 1 homolog b-like OS=Cucurbita maxima OX=3661 GN=LOC111493172 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 6.2e-100
Identity = 198/202 (98.02%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVIIDLKSKLYRFDKE 60
           MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVI+DLKSKLYRFDKE
Sbjct: 1   MASSDTERREDEEAPAAEDEDTGAQVAPIVKLEAVAVTTGEENEDVILDLKSKLYRFDKE 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120

Query: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADQLEKLKVE 180
           APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAAD LEKLKVE
Sbjct: 121 APDYADGELKDELFCIRFPSIENCKTFMETFQEVAESQTKKEENEDASAAADLLEKLKVE 180

Query: 181 DKKKEGEDKAEDKAEDKAAEKE 203
           +KK+EGEDKAEDKAEDKAAEKE
Sbjct: 181 EKKEEGEDKAEDKAEDKAAEKE 202

[Close]

BLAST of Carg07060 vs. ExPASy TrEMBL
Match: A0A6J1I618 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-94
Identity = 188/214 (87.85%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 206 DPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQW 265
           D ERR+ E+APAG+DEDTGAQVAPIVKLEEV VTTGEE+EDA+LDLKAKLYRFDKDGNQW
Sbjct: 5   DSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQW 64

Query: 266 KERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAADF 325
           KERGAGTVKFLKHK TGKVRLVMRQSKTLKICANHLV+ SMTVQEHAGN+KSCVWHA DF
Sbjct: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDF 124

Query: 326 ADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKKG 385
           ADGELK+ELFCIRFPSIENCK+F ETFQEIAESQQKK+ENKDAS+AAGLLEKLSVEEKKG
Sbjct: 125 ADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASSAAGLLEKLSVEEKKG 184

Query: 386 EEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
            EDKAG+TP+KTKEEDEPKG   +K+DAEKKNDE
Sbjct: 185 -EDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 217

[Close]

BLAST of Carg07060 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 286.6 bits (732), Expect = 3.3e-77
Identity = 158/220 (71.82%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 204 DTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGN 263
           + + E R++E+A A +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+KLYRFDKD N
Sbjct: 5   EPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDAN 64

Query: 264 QWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAA 323
           QWKERGAGTVKFLKHKNTGK+RLVMRQSKTLKICANH V S M+VQEH GNEKSCVWHA 
Sbjct: 65  QWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHAR 124

Query: 324 DFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEK 383
           DFADGELK+ELFCIRF SIENCKTF + F+E+AES+++K+E+KDA+  AGLLEKL+VEE 
Sbjct: 125 DFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEET 184

Query: 384 KGEED---KAGDTPAKT--KEEDEPKGEAEKKADAEKKND 419
           K EE    KA +T AKT  K E++ + EAEK  +A+K  +
Sbjct: 185 KTEEKTEAKAVET-AKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Carg07060 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 270.4 bits (690), Expect = 2.4e-72
Identity = 145/216 (67.13%), Postives = 177/216 (81.94%), Query Frame = 0


Query: 199 AEKEKDTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF 258
           A    + + E R++E+  A +DEDTGAQVAPIV+LEEVAVTTGEEDED ILDLK+KLYRF
Sbjct: 2   ASISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRF 61

Query: 259 DKDGNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSC 318
           DKDG+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV S M+VQEHAGN+KSC
Sbjct: 62  DKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSC 121

Query: 319 VWHAADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKL 378
           VWHA DF+DGELK+ELFCIRF S+ENCK F + F+E+AES+++K+E+KDAS  AGLLEKL
Sbjct: 122 VWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKL 181

Query: 379 SVEEKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAE 415
           +VEEK+ E+      P +  EE++     E+K   E
Sbjct: 182 TVEEKESEK-----KPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Carg07060 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 266.2 bits (679), Expect = 4.6e-71
Identity = 151/216 (69.91%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 205 TDPERREDED-APAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGN 264
           T+PER   ED     +DEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+K+YRFDK+GN
Sbjct: 4   TEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGN 63

Query: 265 QWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAA 324
           QWKERGAGTVK LKHK TGKVRLVMRQSKTLKICANHL+ S M+VQEH+GNEKSC+WHA 
Sbjct: 64  QWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHAT 123

Query: 325 DFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEK 384
           DF+DGELK+ELFCIRF SIENCKTF E F EIAESQQ   E+     AAGL+E LSVEE 
Sbjct: 124 DFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEEN 183

Query: 385 KGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 420
             EE       AK  EE EP  E +K+   EK  +E
Sbjct: 184 ISEE------KAKEAEEKEPAKE-DKETKKEKVEEE 212

The following BLAST results are available for this feature:

BLAST of Carg07060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036999.1	2.4e-223	100.00	Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949353.1	3.0e-109	100.00	ran-binding protein 1 homolog a-like [Cucurbita moschata] >XP_023523176.1 ran-bi...	[more]
XP_022998583.1	2.6e-108	99.07	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]
XP_022949354.1	2.3e-101	99.50	ran-binding protein 1 homolog b-like [Cucurbita moschata]	[more]
XP_022998584.1	1.3e-99	98.02	ran-binding protein 1 homolog b-like [Cucurbita maxima]	[more]

BLAST of Carg07060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	4.6e-76	71.82	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	3.4e-71	67.13	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	6.5e-70	69.91	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q9ERU9	1.2e-44	29.98	E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2	[more]
P49792	3.0e-43	29.98	E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2	[more]

BLAST of Carg07060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBT0	1.5e-109	100.00	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A6J1KH56	1.2e-108	99.07	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111493171...	[more]
A0A6J1GCK9	1.1e-101	99.50	ran-binding protein 1 homolog b-like OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A6J1KEQ3	6.2e-100	98.02	ran-binding protein 1 homolog b-like OS=Cucurbita maxima OX=3661 GN=LOC111493172...	[more]
A0A6J1I618	2.3e-94	87.85	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535...	[more]

BLAST of Carg07060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	3.3e-77	71.82	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	2.4e-72	67.13	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	4.6e-71	69.91	RAN binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..419
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 6..204 coord: 208..418
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 6..204
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 208..418
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 23..156 e-value: 7.86983E-65 score: 202.028
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 224..357 e-value: 8.95585E-65 score: 202.028
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 24..161
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 229..356
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 e-value: 1.6E-39 score: 147.3 coord: 227..355 e-value: 4.3E-43 score: 159.2
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 238..355 e-value: 2.2E-41 score: 141.0 coord: 37..154 e-value: 4.6E-39 score: 133.4
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..160 score: 34.021488
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 226..361 score: 35.210735
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 210..375 e-value: 3.5E-54 score: 184.7 coord: 9..174 e-value: 2.3E-53 score: 182.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07060-RA	Carg07060-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity