Carg07023 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07023
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	histone-lysine N-methyltransferase SETD1B-like
Location	Carg_Chr01: 3869417 .. 3870010 (-)
RNA-Seq Expression	Carg07023
Synteny	Carg07023

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACAAATTCAGGGGATTTTGGAGGCAAATTTGGGAAAATGAGGCTTAAAAGCCTCAAAACAAGGGATGATATATTGACAGTGGATGAAGATTACCACACAGGAGTATCAGCCACAGTGCCATTCATATGGGAGTCCGAGCCAGGCACTCCCAAGGCCAATTTCAGGGACCATGGCTCACTCCTTTCCCCTCTCACGCCCCCACCATCCTATTTCTCCTCACCCTCACACACACCCTCCAAGCATAAATATAACACCAACCCACATCCCTCTCGAGCCAATTTCCTCACCTCGGTTTTCAAGAAGCTTTCTGTGAATAAGGCTCCTCTCCATCCGCTCTCTCCCGGCTCCTCGTCGTCGTCGTCGTCGACACTGACAAGCTCTGAGGGAGAGAGAGGAAGAAGCCCGAGGAGATTGTCGTTTGATTCGAGAGTGGACGAGAACGAGCACGAGGACGAAGAAGAGGAAGAGGAGAATTTCGACTCGCCTGTTTCGACTTTGTTCTTTGGACGTGGCGGAGGATCGAGTGATAAAGGATGCTATTGCTATCCAAAGTTGGTGAAGGTATTCTCCAAGCATTGTTCTAAATGA

mRNA sequence

ATGTCAACAAATTCAGGGGATTTTGGAGGCAAATTTGGGAAAATGAGGCTTAAAAGCCTCAAAACAAGGGATGATATATTGACAGTGGATGAAGATTACCACACAGGAGTATCAGCCACAGTGCCATTCATATGGGAGTCCGAGCCAGGCACTCCCAAGGCCAATTTCAGGGACCATGGCTCACTCCTTTCCCCTCTCACGCCCCCACCATCCTATTTCTCCTCACCCTCACACACACCCTCCAAGCATAAATATAACACCAACCCACATCCCTCTCGAGCCAATTTCCTCACCTCGGTTTTCAAGAAGCTTTCTGTGAATAAGGCTCCTCTCCATCCGCTCTCTCCCGGCTCCTCGTCGTCGTCGTCGTCGACACTGACAAGCTCTGAGGGAGAGAGAGGAAGAAGCCCGAGGAGATTGTCGTTTGATTCGAGAGTGGACGAGAACGAGCACGAGGACGAAGAAGAGGAAGAGGAGAATTTCGACTCGCCTGTTTCGACTTTGTTCTTTGGACGTGGCGGAGGATCGAGTGATAAAGGATGCTATTGCTATCCAAAGTTGGTGAAGGTATTCTCCAAGCATTGTTCTAAATGA

Coding sequence (CDS)

ATGTCAACAAATTCAGGGGATTTTGGAGGCAAATTTGGGAAAATGAGGCTTAAAAGCCTCAAAACAAGGGATGATATATTGACAGTGGATGAAGATTACCACACAGGAGTATCAGCCACAGTGCCATTCATATGGGAGTCCGAGCCAGGCACTCCCAAGGCCAATTTCAGGGACCATGGCTCACTCCTTTCCCCTCTCACGCCCCCACCATCCTATTTCTCCTCACCCTCACACACACCCTCCAAGCATAAATATAACACCAACCCACATCCCTCTCGAGCCAATTTCCTCACCTCGGTTTTCAAGAAGCTTTCTGTGAATAAGGCTCCTCTCCATCCGCTCTCTCCCGGCTCCTCGTCGTCGTCGTCGTCGACACTGACAAGCTCTGAGGGAGAGAGAGGAAGAAGCCCGAGGAGATTGTCGTTTGATTCGAGAGTGGACGAGAACGAGCACGAGGACGAAGAAGAGGAAGAGGAGAATTTCGACTCGCCTGTTTCGACTTTGTTCTTTGGACGTGGCGGAGGATCGAGTGATAAAGGATGCTATTGCTATCCAAAGTTGGTGAAGGTATTCTCCAAGCATTGTTCTAAATGA

Protein sequence

MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHGSLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSSSSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSDKGCYCYPKLVKVFSKHCSK

Homology

[Close]

BLAST of Carg07023 vs. NCBI nr
Match: KAG7037033.1 (hypothetical protein SDJN02_00654, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.7 bits (1018), Expect = 1.1e-106
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60
           MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG
Sbjct: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60

Query: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120
           SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS
Sbjct: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120

Query: 121 SSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSDKG 180
           SSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSDKG
Sbjct: 121 SSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSDKG 180

Query: 181 CYCYPKLVKVFSKHCSK 198
           CYCYPKLVKVFSKHCSK
Sbjct: 181 CYCYPKLVKVFSKHCSK 197

[Close]

BLAST of Carg07023 vs. NCBI nr
Match: XP_022949317.1 (uncharacterized protein LOC111452704 [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 8.1e-105
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60
           MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG
Sbjct: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60

Query: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120
           SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS
Sbjct: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120

Query: 121 S--SSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180
           S  SS+TLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD
Sbjct: 121 SSTSSTTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180

Query: 181 KGCYCYPKLVKVFSKHCSK 198
           KGCYCYPKLVKVFSKHCSK
Sbjct: 181 KGCYCYPKLVKVFSKHCSK 199

[Close]

BLAST of Carg07023 vs. NCBI nr
Match: KAG6607361.1 (hypothetical protein SDJN03_00703, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.0 bits (998), Expect = 2.4e-104
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60
           MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG
Sbjct: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60

Query: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120
           SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS
Sbjct: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120

Query: 121 SSSST--LTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180
           SS+S+  LTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD
Sbjct: 121 SSTSSTILTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180

Query: 181 KGCYCYPKLVKVFSKHCSK 198
           KGCYCYPKLVKVFSKHCSK
Sbjct: 181 KGCYCYPKLVKVFSKHCSK 199

[Close]

BLAST of Carg07023 vs. NCBI nr
Match: XP_022997732.1 (uncharacterized protein LOC111492604 [Cucurbita maxima])

HSP 1 Score: 386.3 bits (991), Expect = 1.5e-103
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0


Query: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60
           MSTNSG+FGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG
Sbjct: 1   MSTNSGNFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60

Query: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120
           SLLSPLTPPPSYFSSPSHTP KHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS
Sbjct: 61  SLLSPLTPPPSYFSSPSHTPFKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120

Query: 121 S--SSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180
           S  SS+TLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD
Sbjct: 121 SSTSSTTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180

Query: 181 KGCYCYPKLVKVFSKHCSK 198
           KGCYCYPKLVKVFSKHCSK
Sbjct: 181 KGCYCYPKLVKVFSKHCSK 199

[Close]

BLAST of Carg07023 vs. NCBI nr
Match: XP_038894794.1 (uncharacterized protein LOC120083212 [Benincasa hispida] >XP_038894795.1 uncharacterized protein LOC120083212 [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 3.1e-48
Identity = 121/198 (61.11%), Postives = 150/198 (75.76%), Query Frame = 0


Query: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTV-DEDYHTGVSATVPFIWESEPGTPKANFRDH 60
           +  NS D GGK  KMRLK L+TRDD+  V +EDYHTGVSA+VPF WESEPGTPKANF ++
Sbjct: 3   LGRNSEDLGGKSRKMRLKKLRTRDDMSFVEEEDYHTGVSASVPFKWESEPGTPKANFHEN 62

Query: 61  GSLLSPLTPPPSYFSSP---SHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSP 120
           G++LSPLTPPPSYFS+    +++P  H +++ P  S++NFL SVF+KLSV K  L P SP
Sbjct: 63  GAILSPLTPPPSYFSNDHNITNSPLTH-FSSKPISSKSNFLNSVFRKLSV-KPTLQPPSP 122

Query: 121 -GSSSSSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGG 180
            GS SSSSS+ +SSE  R  SPRRLSFDSRVD    +D+ +++ N +SPVSTLFFG G  
Sbjct: 123 AGSLSSSSSSTSSSERRRSGSPRRLSFDSRVD----DDDNDDDGNVESPVSTLFFGHG-- 182

Query: 181 SSDKGCYCYPKLVKVFSK 194
            SDKG  CYPKLVKVF++
Sbjct: 183 -SDKG--CYPKLVKVFTR 189

[Close]

BLAST of Carg07023 vs. ExPASy TrEMBL
Match: A0A6J1GBP3 (uncharacterized protein LOC111452704 OS=Cucurbita moschata OX=3662 GN=LOC111452704 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.9e-105
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60
           MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG
Sbjct: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60

Query: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120
           SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS
Sbjct: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120

Query: 121 S--SSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180
           S  SS+TLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD
Sbjct: 121 SSTSSTTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180

Query: 181 KGCYCYPKLVKVFSKHCSK 198
           KGCYCYPKLVKVFSKHCSK
Sbjct: 181 KGCYCYPKLVKVFSKHCSK 199

[Close]

BLAST of Carg07023 vs. ExPASy TrEMBL
Match: A0A6J1K5W9 (uncharacterized protein LOC111492604 OS=Cucurbita maxima OX=3661 GN=LOC111492604 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.4e-104
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0


Query: 1   MSTNSGDFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60
           MSTNSG+FGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG
Sbjct: 1   MSTNSGNFGGKFGKMRLKSLKTRDDILTVDEDYHTGVSATVPFIWESEPGTPKANFRDHG 60

Query: 61  SLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120
           SLLSPLTPPPSYFSSPSHTP KHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS
Sbjct: 61  SLLSPLTPPPSYFSSPSHTPFKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSS 120

Query: 121 S--SSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180
           S  SS+TLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD
Sbjct: 121 SSTSSTTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSD 180

Query: 181 KGCYCYPKLVKVFSKHCSK 198
           KGCYCYPKLVKVFSKHCSK
Sbjct: 181 KGCYCYPKLVKVFSKHCSK 199

[Close]

BLAST of Carg07023 vs. ExPASy TrEMBL
Match: A0A0A0LYC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 117/200 (58.50%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 4   NSGDFG-GKFGKMRLKSLKTRDDILTV---DEDYHTGVSATVPFIWESEPGTPKANFRDH 63
           NSG+ G GK GKMRLK L+ R+D+ T+   +EDYHTG+SA+VPF WESEPGTPKAN  D 
Sbjct: 7   NSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLNDR 66

Query: 64  G--SLLSPLTPPPSYFSSP---SHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPL 123
              SLLSPLTPPPSYFS+    + +P  H  ++ P  ++ +FL +VF+KLSV  + L P 
Sbjct: 67  NSRSLLSPLTPPPSYFSNHLIINSSPMIH-LSSKPSFNKPSFLNTVFRKLSVKPSTLQPP 126

Query: 124 SPGSSSSSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGG 183
           SP SSSSSSST+   E  R  SPRRLSFDSRVD++  +D+E E+ N +SPVSTLFFGR  
Sbjct: 127 SPASSSSSSSTM---ERRRYASPRRLSFDSRVDDD--DDDENEDGNLESPVSTLFFGR-- 186

Query: 184 GSSDKGCYCYPKLVKVFSKH 195
             SDKG  CYPKLVKVF+++
Sbjct: 187 -RSDKG--CYPKLVKVFTRY 195

[Close]

BLAST of Carg07023 vs. ExPASy TrEMBL
Match: A0A5D3BF70 (NADPH oxidase activator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00550 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.1e-44
Identity = 119/200 (59.50%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 4   NSGDF-GGKFGKMRLKSLKTRDD---ILTVDEDYHTGVSATVPFIWESEPGTPKANFRD- 63
           NSG+  GGK GKMRLK L+TRDD   I+  +EDYHTG+SA+VPF WESEPGTPKAN  D 
Sbjct: 7   NSGELGGGKSGKMRLKKLRTRDDMSRIMVEEEDYHTGLSASVPFKWESEPGTPKANLHDN 66

Query: 64  -HGSLLSPLTPPPSYFSSP---SHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPL 123
            +GSLLSPLTPPPSYFS+    + +P  H  ++ P  ++ + L +VF+ LSV K  L P 
Sbjct: 67  NNGSLLSPLTPPPSYFSNHLIINSSPIIH-LSSKPSFNKPSCLNTVFRMLSV-KPTLQPP 126

Query: 124 SPGSSSSSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGG 183
           SP SSSSSS T+   E  R  SPRRLSFDSRVD+++ ED+E E+ N +SPVSTLFFGRG 
Sbjct: 127 SPASSSSSSPTM---ERRRSGSPRRLSFDSRVDDDD-EDDENEDGNVESPVSTLFFGRG- 186

Query: 184 GSSDKGCYCYPKLVKVFSKH 195
             S+KG  CYP LVKVF++H
Sbjct: 187 --SEKG--CYPNLVKVFTRH 195

[Close]

BLAST of Carg07023 vs. ExPASy TrEMBL
Match: A0A1S3C5A7 (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103497034 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.1e-44
Identity = 119/200 (59.50%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 4   NSGDF-GGKFGKMRLKSLKTRDD---ILTVDEDYHTGVSATVPFIWESEPGTPKANFRD- 63
           NSG+  GGK GKMRLK L+TRDD   I+  +EDYHTG+SA+VPF WESEPGTPKAN  D 
Sbjct: 7   NSGELGGGKSGKMRLKKLRTRDDMSRIMVEEEDYHTGLSASVPFKWESEPGTPKANLHDN 66

Query: 64  -HGSLLSPLTPPPSYFSSP---SHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPL 123
            +GSLLSPLTPPPSYFS+    + +P  H  ++ P  ++ + L +VF+ LSV K  L P 
Sbjct: 67  NNGSLLSPLTPPPSYFSNHLIINSSPIIH-LSSKPSFNKPSCLNTVFRMLSV-KPTLQPP 126

Query: 124 SPGSSSSSSSTLTSSEGERGRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGG 183
           SP SSSSSS T+   E  R  SPRRLSFDSRVD+++ ED+E E+ N +SPVSTLFFGRG 
Sbjct: 127 SPASSSSSSPTM---ERRRSGSPRRLSFDSRVDDDD-EDDENEDGNVESPVSTLFFGRG- 186

Query: 184 GSSDKGCYCYPKLVKVFSKH 195
             S+KG  CYP LVKVF++H
Sbjct: 187 --SEKG--CYPNLVKVFTRH 195

[Close]

BLAST of Carg07023 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 66/182 (36.26%), Postives = 84/182 (46.15%), Query Frame = 0


Query: 27  LTVDEDYHTGVSATVPFIWESEPGTPKANFRDHGS------------LLSPLTPPPSYF- 86
           + V+ DY+ G SA VPF WES+PGTP+   +   S            + +PLTPPPSYF 
Sbjct: 18  VAVEGDYYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFY 77

Query: 87  SSPSHTPSKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSSSSSSTLTSSEGER 146
           +SPS T  KH    +P  +   F + + K  SV      P SP SSSSSSS+   S    
Sbjct: 78  ASPSST--KH---VSPKKTNTLFSSLLSKNRSV------PSSPASSSSSSSSSVPS---- 137

Query: 147 GRSPRRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGGGSSDKGCYCYPKLVKVFSK 196
             SP R S  S                F+S  S  +    G +S K   CY  LVKV  +
Sbjct: 138 --SPLRTSDLS---------NRRRSMWFESGSSLDY----GSNSAKSSGCYASLVKVLLR 169

[Close]

BLAST of Carg07023 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 0


Query: 33  YHTGVSATVPFIWESEPGTPKANFRDHGSLLSPLTPPPSYFSSPSHTPSKHKYNTNPHPS 92
           Y+ G  A+VPF+WE+ PGTPK         L PLTPPPSY+SS S   S +K +      
Sbjct: 32  YYYG-GASVPFLWETRPGTPKHALFSESLRLPPLTPPPSYYSSSS--SSGNKLSKARTIK 91

Query: 93  RANFLTSVFKKLSVNKAPLHPLSPGSSSSSSSTLTSSEGERGRSPRRLSFDSRVDENEHE 152
           +  F+ ++  +  V++      S  SSSSSS + +S   +    PR+    SR   +  +
Sbjct: 92  QTRFVKTLLSR-HVSRPSFSWSSASSSSSSSYSSSSPPSKVEHRPRKCYSCSR---SYVK 151

Query: 153 DEEEEEENFDSPVSTLFFGRGGGSS 178
           +++EEE    SP STL + RG  SS
Sbjct: 152 EDDEEEIVSSSPTSTLCYKRGFSSS 169

[Close]

BLAST of Carg07023 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08
Identity = 57/159 (35.85%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 24  DDILTVDED---YHTGVSATVPFIWESEPGTPKANFRDHGSLLSPLTPPPSYFSSPSHTP 83
           +D   +DE+   Y+ G  A++PFIWES PGTPK +     SL  PLTPPPSY+S  S   
Sbjct: 6   EDDFAIDEERSSYYGG--ASIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYS--SGIL 65

Query: 84  SKHKYNTNPHPSRANFLTSVFKKLSVNKAPLHPLSPGSSSSSSSTLTSSEGERGRSP--- 143
           S  +  +      + FL+  F   S  +   H     +SSS S + TSS      SP   
Sbjct: 66  STPRTQSKVRSKLSKFLS--FSMFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSPPHS 125

Query: 144 --RRLSFDSRVDENEHEDEEEEEENFDSPVSTLFFGRGG 175
             +R+S D +        EE+E  +  SP STL    GG
Sbjct: 126 LKKRMSHDKKSPLLYANYEEDELRS--SPTSTLCCSNGG 156

The following BLAST results are available for this feature:

BLAST of Carg07023 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037033.1	1.1e-106	100.00	hypothetical protein SDJN02_00654, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022949317.1	8.1e-105	98.49	uncharacterized protein LOC111452704 [Cucurbita moschata]	[more]
KAG6607361.1	2.4e-104	97.99	hypothetical protein SDJN03_00703, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022997732.1	1.5e-103	97.49	uncharacterized protein LOC111492604 [Cucurbita maxima]	[more]
XP_038894794.1	3.1e-48	61.11	uncharacterized protein LOC120083212 [Benincasa hispida] >XP_038894795.1 unchara...	[more]

BLAST of Carg07023 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg07023 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBP3	3.9e-105	98.49	uncharacterized protein LOC111452704 OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A6J1K5W9	7.4e-104	97.49	uncharacterized protein LOC111492604 OS=Cucurbita maxima OX=3661 GN=LOC111492604...	[more]
A0A0A0LYC9	1.7e-44	58.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1	[more]
A0A5D3BF70	5.1e-44	59.50	NADPH oxidase activator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C5A7	5.1e-44	59.50	uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103497034 PE=4 S...	[more]

BLAST of Carg07023 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06930.1	1.6e-10	36.26	unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ...	[more]
AT2G40475.1	3.1e-09	36.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G56260.2	2.6e-08	35.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007789	Protein of unknown function DUF688	PFAM	PF05097	DUF688	coord: 39..163 e-value: 7.9E-6 score: 25.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..147
None	No IPR available	PANTHER	PTHR33257:SF24	EXPRESSED PROTEIN	coord: 33..182
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 33..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07023-RA	Carg07023-RA	mRNA