Carg06964 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATATTTCGAAGCTACGGACGGATGTGGGGTGGATGAGATCCCATTTTCGGCTGCATCCGCATCTCCCAACAACCGCAACCATTGAAGCCCTGTGATCCGATTCGTTCTCTTCCTGCAAATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTTGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTCTTATTCCTTCTCTTCCCTAATTCCTTCTACTCGGGCATTTTTGTTGTTTTGCTTGATTAAGATGCCGGGCTCCGGCTGTTGGATTTGGGAATACCTGGAACAAACCCTCCCCATCCCTATTTCATTTTTGCTGCTGATATCATCACTACCCTGCTGTTCGAGATGTTTCCGATTTTTACCGGGTTTTCTTTTTCTCTTTCTTATCTGTAGTTTCGTGTTATGCTAGGTTGCTTGGACCCTGATAACTTCAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGGTTTTATTCGATTTGATACTTCGTGGAGTAAAGATTTATCAATGGAATGTTAGGAGTCTTCAAACGATTTGTTGTTGTAAGTTATGATGTGCTTTTGTTCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGGTATAGGCCTTGCACTCCCAATGGGCAATAGCTTGCAGTTTTTCTTAGTGTGTTTAACCATCTGCCCAATTCTATCCATCCACCCATAACATTTGGTATTTTGGCATACAACTACTACAATATGCAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGTATTGCCAATATGTCCTACAACTGCCACTACATTAGTAGAATTGAGATTTTCATTTTTTTCTCTGTTAATTTGAACCTTGAACGGCTAACTCGGTCAGAGTGGATGTTAGTCTTGAGTATACCTTTTATTTTGTCAAGTGTTCGCATTCTTTTTGAAAGGTTTATGAGTGGTTATGAGTATTCGTATGGCTGGACTGGGTGTGAATATTTTGTGGCTGCTAGTTACTAAGATGACGTTGGATGCTTTTTAGTTGTGTTTAAGCATTCTATTATTGAGTTTGAGGAGTTATTCTCTTTTGTTTGAATTGGTACGTTTACACAATTTTTTGGCTGGATTTTGGTTCTTTATTTGTTACTGTTGGGTGATTTATGGCTGGTTGAGTAATGTTTATTATTTATGTATATCGTTTGAGGAGGCATTGTTTTAACCACTCATCAAGTTTTAGAGTTTGAATTGGACGGAATAAAAAATTGAAGGCAAAGATTGACATAAGTTAAGGAAAAAAATCAGTCCCTTTGGGGGATTGGGATTCATAATAAAACATAAGGTTATATTAGAACTTCGAGGAGCGCATTGAACAGCCCAACTGTTTCTGGTCTCAAATTTTCTGTTTTGGAGGAGCGAGGTACTTAAAATATTAGATTTTTGACATTTGATGTGGGAAAATCTAAAACTGGGGCACGGGTTCTGGGGTCATATCTATTATTTATGGAGTGGGTGTCTGTTTGTGTGCGCGAGTGGTGACAGGGACGTTTCAAGTATGAAGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCGATGTTCCAGGTATGGGTATAGGCATGGGCATGGGCTAAGTTTGAGCTTAAGTTTTGAGTAAGGATTGATTCGTATTTATTTTCTGTTTGTCCTATAAATAAGCAGATCCCATCAGCATTTCTGAACGTTTCTTTTTTGTGTTTTGAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTATGAAGACATTCTTCTAAAGGTGCTCATTCTCCTCTCTTAAATTTGGATTTGGAAGGTACCCCACATTGAGATTTAGATATTGCCTTGCAAATCCGAACTGAAACCTTCTAGTTTACTGGTGTTTATAGGAAGAATTGGATAGTCTTGTGTCTAGGTTCCCCTCCCGCTTTTCTGTCTACTATGTGCTCGATCAGGTAACAACTTGGGGTTTTATAATTTTGGAAATATATTCTGCAGTTTCATGTCGTTTTACAATCTCTCTCTGCTCCGTACAGCCTCCTGAAGGATGGGATGGCGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCAAATGTTCGGGTGGGTATGCATGCTTTGCTTCATTCGTTTTTCTTTCTCTCTGTAAGAGAAAGTTTGTGCTAAAAACAGGCATTGTTGTTCATTTTGCGACAGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAATCCAACCAACCCCATTATTTACTCTCCTCTTTGCCGATCTAATTCAATCTTCCCATCCCCATCCCAAAAGCAATTGAAGTAAATGTGTATCCAACAAACAATGATATGTTAAACCCAATATTTGGTATTGAACTTGATGTGATATGCAGACATACAGCTACTGGGTTCACATTAAAGAAAAGGTAAGGCAAGGAAAGAAGTTACAGAAAAGCAGCAATGCTGTCGCTCTCTCTGCTACCAACAATCCCACACTTTATGAGGCTCCCAATGGTGTTCCACATCAACTTTGCATCTTCCACTCTGTTTCCCTCTGCCAATTTCTTGTATAGATAGCTTTCGAAAGTCATTCTCTGCACATACTCGTTCCCACACATCTCCACCAATGCTTCCCTTCCGGCGTTGTCTCCATAGAACACTCTCTGCAACAGATCCAAGAACCTGAACGTCCCCACGTACTTGGCGTCCCACTCTCTCAGGTACTCTCTCTTCAGATCCCTTTCTCCGATCATCCTCTCCCCTCCTTCCGATGCTCGCACCACTGCCTCCCCGCACATTCTCCCGGATTTTGCAGCGAAATATATGCCTTCCCCGGAGCACTTCGTTACGTACCCTGCCGCGTCCCCGACCAGTGCCACCCGCCCTATCACTCGCCTAGCTCGCGGGTGCTCCGGTATTGGATGTGCCTCTACTTTAATCACCTTCCCTCCACTTATCTTAC ATATATTTCGAAGCTACGGACGGATGTGGGGTGGATGAGATCCCATTTTCGGCTGCATCCGCATCTCCCAACAACCGCAACCATTGAAGCCCTGTGATCCGATTCGTTCTCTTCCTGCAAATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTTGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTGCTTGGACCCTGATAACTTCAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGGACGTTTCAAGTATGAAGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCGATGTTCCAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGTGTCTAGGTTCCCCTCCCGCTTTTCTGTCTACTATGTGCTCGATCAGCCTCCTGAAGGATGGGATGGCGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCAAATGTTCGGGTGGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAATCCAACCAACCCCATTATTTACTCTCCTCTTTGCCGATCTAATTCAATCTTCCCATCCCCATCCCAAAAGCAATTGAAGTAAATGTGTATCCAACAAACAATGATATGTTAAACCCAATATTTGGTATTGAACTTGATGTGATATGCAGACATACAGCTACTGGGTTCACATTAAAGAAAAGGTAAGGCAAGGAAAGAAGTTACAGAAAAGCAGCAATGCTGTCGCTCTCTCTGCTACCAACAATCCCACACTTTATGAGGCTCCCAATGGTGTTCCACATCAACTTTGCATCTTCCACTCTGTTTCCCTCTGCCAATTTCTTGTATAGATAGCTTTCGAAAGTCATTCTCTGCACATACTCGTTCCCACACATCTCCACCAATGCTTCCCTTCCGGCGTTGTCTCCATAGAACACTCTCTGCAACAGATCCAAGAACCTGAACGTCCCCACGTACTTGGCGTCCCACTCTCTCAGGTACTCTCTCTTCAGATCCCTTTCTCCGATCATCCTCTCCCCTCCTTCCGATGCTCGCACCACTGCCTCCCCGCACATTCTCCCGGATTTTGCAGCGAAATATATGCCTTCCCCGGAGCACTTCGTTACGTACCCTGCCGCGTCCCCGACCAGTGCCACCCGCCCTATCACTCGCCTAGCTCGCGGGTGCTCCGGTATTGGATGTGCCTCTACTTTAATCACCTTCCCTCCACTTATCTTAC ATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTTGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTGCTTGGACCCTGATAACTTCAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGGACGTTTCAAGTATGAAGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCGATGTTCCAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGTGTCTAGGTTCCCCTCCCGCTTTTCTGTCTACTATGTGCTCGATCAGCCTCCTGAAGGATGGGATGGCGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCAAATGTTCGGGTGGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAATCCAACCAACCCCATTATTTACTCTCCTCTTTGCCGATCTAATTCAATCTTCCCATCCCCATCCCAAAAGCAATTGA MATSFVHSHRPEFLTVAVAAVAIGVATAYYFYITKKSKPQGCLDPDNFKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHMSCRGKDSEGEEVVKPYTPTSLDTDVGYFDLVIKMYPQGRMSHHFREMREGDFLAVKGPKGRFKYEANEVEAFGMLAGGTGITPMFQVARAILENPVDHTNVHLIYANATYEDILLKEELDSLVSRFPSRFSVYYVLDQPPEGWDGGVGFVTEEMIRLHCPGPSPNVRVDIEVRTTPHEQSYGCLPQNYWLYFPNAVPVLIQPTPLFTLLFADLIQSSHPHPKSN Homology
BLAST of Carg06964 vs. NCBI nr
Match: KAG7010210.1 (NADH--cytochrome b5 reductase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 646.4 bits (1666), Expect = 1.3e-181 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022944291.1 (NADH--cytochrome b5 reductase 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 617.1 bits (1590), Expect = 8.4e-173 Identity = 297/306 (97.06%), Postives = 299/306 (97.71%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022985759.1 (NADH--cytochrome b5 reductase 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 611.7 bits (1576), Expect = 3.5e-171 Identity = 294/306 (96.08%), Postives = 296/306 (96.73%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022944292.1 (NADH--cytochrome b5 reductase 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 562.4 bits (1448), Expect = 2.5e-156 Identity = 276/306 (90.20%), Postives = 278/306 (90.85%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022985760.1 (NADH--cytochrome b5 reductase 1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 557.0 bits (1434), Expect = 1.0e-154 Identity = 273/306 (89.22%), Postives = 275/306 (89.87%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy Swiss-Prot
Match: Q9ZNT1 (NADH--cytochrome b5 reductase 1 OS=Arabidopsis thaliana OX=3702 GN=CBR1 PE=1 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.1e-101 Identity = 174/254 (68.50%), Postives = 208/254 (81.89%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy Swiss-Prot
Match: Q6BUX2 (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=CBR1 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.5e-63 Identity = 118/237 (49.79%), Postives = 159/237 (67.09%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy Swiss-Prot
Match: Q6CA86 (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=CBR1 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.8e-62 Identity = 119/244 (48.77%), Postives = 164/244 (67.21%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy Swiss-Prot
Match: A1C7E9 (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=cbr1 PE=3 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 8.1e-62 Identity = 123/250 (49.20%), Postives = 162/250 (64.80%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy Swiss-Prot
Match: Q59P03 (NADH-cytochrome b5 reductase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CBR1 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.8e-61 Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy TrEMBL
Match: A0A6J1FU08 (NADH--cytochrome b5 reductase 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448782 PE=4 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 4.1e-173 Identity = 297/306 (97.06%), Postives = 299/306 (97.71%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy TrEMBL
Match: A0A6J1JE65 (NADH--cytochrome b5 reductase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483718 PE=4 SV=1) HSP 1 Score: 611.7 bits (1576), Expect = 1.7e-171 Identity = 294/306 (96.08%), Postives = 296/306 (96.73%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy TrEMBL
Match: A0A6J1FVC6 (NADH--cytochrome b5 reductase 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448782 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156 Identity = 276/306 (90.20%), Postives = 278/306 (90.85%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy TrEMBL
Match: A0A6J1JC74 (NADH--cytochrome b5 reductase 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483718 PE=4 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 5.0e-155 Identity = 273/306 (89.22%), Postives = 275/306 (89.87%), Query Frame = 0
BLAST of Carg06964 vs. ExPASy TrEMBL
Match: A0A6J1FXX1 (NADH-cytochrome b5 reductase OS=Cucurbita moschata OX=3662 GN=LOC111448782 PE=3 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 3.0e-144 Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of Carg06964 vs. TAIR 10
Match: AT5G17770.1 (NADH:cytochrome B5 reductase 1 ) HSP 1 Score: 369.8 bits (948), Expect = 2.2e-102 Identity = 174/254 (68.50%), Postives = 208/254 (81.89%), Query Frame = 0
BLAST of Carg06964 vs. TAIR 10
Match: AT5G20080.1 (FAD/NAD(P)-binding oxidoreductase ) HSP 1 Score: 196.4 bits (498), Expect = 3.3e-50 Identity = 105/258 (40.70%), Postives = 160/258 (62.02%), Query Frame = 0
BLAST of Carg06964 vs. TAIR 10
Match: AT1G37130.1 (nitrate reductase 2 ) HSP 1 Score: 168.7 bits (426), Expect = 7.3e-42 Identity = 86/213 (40.38%), Postives = 131/213 (61.50%), Query Frame = 0
BLAST of Carg06964 vs. TAIR 10
Match: AT1G77760.1 (nitrate reductase 1 ) HSP 1 Score: 162.2 bits (409), Expect = 6.9e-40 Identity = 80/213 (37.56%), Postives = 128/213 (60.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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