Carg06937 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06937
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein
Location	Carg_Chr20: 192497 .. 192871 (+)
RNA-Seq Expression	Carg06937
Synteny	Carg06937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCTCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTCATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGCTTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCGGCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCACCAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGGTATAGATAA

mRNA sequence

ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCTCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTCATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGCTTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCGGCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCACCAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGGTATAGATAA

Coding sequence (CDS)

ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCTCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTCATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGCTTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCGGCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCACCAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGGTATAGATAA

Protein sequence

MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFPFGYR

Homology

[Close]

BLAST of Carg06937 vs. NCBI nr
Match: KAG6570356.1 (hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010237.1 hypothetical protein SDJN02_27029, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.8 bits (621), Expect = 7.7e-61
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV
Sbjct: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP
Sbjct: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120

Query: 121 FGYR 125
           FGYR
Sbjct: 121 FGYR 124

[Close]

BLAST of Carg06937 vs. NCBI nr
Match: XP_007014761.1 (PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao] >EOY32380.1 Uncharacterized protein TCM_040264 [Theobroma cacao])

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  +L+YL+LPPL LC F  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RDSFLDYLSLPPLHLCFFVSILFFVLGFSWYINYESMFEDFINQLKFFLMLS 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLL+H  S  +PFL+PLPEQ+SLHR GGSPWGVA+LLVFLLY+IS+QS +H RWFP
Sbjct: 61  PVVLLLLIHCFSGSVPFLIPLPEQDSLHRTGGSPWGVALLLVFLLYMISYQSSFHERWFP 119

Query: 121 FG 123
            G
Sbjct: 121 LG 119

[Close]

BLAST of Carg06937 vs. NCBI nr
Match: XP_022756288.1 (uncharacterized protein LOC111304026 [Durio zibethinus])

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-32
Identity = 77/120 (64.17%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   RY +L+YL+ PP+ LC+F  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RYSFLDYLSPPPVHLCLFVFILFFVLGFSWYINYESMFEDFINQLKFFLMLT 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PL+LL+L+H LS  +PFL+PLPEQ+SLHRAGGSPWGVA++LVFLLY+IS+QS +H RWFP
Sbjct: 61  PLVLLVLVHCLSGRVPFLIPLPEQDSLHRAGGSPWGVALVLVFLLYMISYQSSFHERWFP 117

[Close]

BLAST of Carg06937 vs. NCBI nr
Match: XP_021278994.1 (uncharacterized protein LOC110412707 [Herrania umbratica])

HSP 1 Score: 148.7 bits (374), Expect = 3.4e-32
Identity = 78/122 (63.93%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  +L+YL+LPPL LCVF  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RDSFLDYLSLPPLHLCVFVSILFFVLGFSWYINYESMFEDFINQLKFFLMLS 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLL+H  S  +PFL+PLPEQ+SLHRAGGSPWGVA++LVFLLY+IS+QS +  RWFP
Sbjct: 61  PVVLLLLVHCFSGSVPFLIPLPEQDSLHRAGGSPWGVALVLVFLLYMISYQSSFQERWFP 119

Query: 121 FG 123
            G
Sbjct: 121 LG 119

[Close]

BLAST of Carg06937 vs. NCBI nr
Match: XP_012462541.1 (PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii] >XP_016734953.1 uncharacterized protein LOC107945445 [Gossypium hirsutum] >XP_017605397.1 PREDICTED: uncharacterized protein LOC108452152 [Gossypium arboreum] >XP_040941762.1 uncharacterized protein LOC121212647 [Gossypium hirsutum] >KAB1996691.1 hypothetical protein ES319_D13G249000v1 [Gossypium barbadense] >TYG38918.1 hypothetical protein ES288_D13G262800v1 [Gossypium darwinii] >TYH36452.1 hypothetical protein ES332_D13G265700v1 [Gossypium tomentosum] >KAB2050259.1 hypothetical protein ES319_A13G234100v1 [Gossypium barbadense] >KAG4113345.1 hypothetical protein ERO13_D13G217700v2 [Gossypium hirsutum])

HSP 1 Score: 144.8 bits (364), Expect = 4.9e-31
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  Y++YL+LPPL LC F  IL  V+ FSWY+ Y+S LED + QLK FL+  
Sbjct: 1   MARYY---RDSYMDYLSLPPLHLCFFISILFFVLGFSWYLNYESVLEDFMNQLKFFLMLA 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLLLH  S  +P L+P PE++SLHRAGGSPWGVA++LV LLY+IS+QS++H RWFP
Sbjct: 61  PIVLLLLLHCFSGRVPSLIPEPEKDSLHRAGGSPWGVALVLVLLLYMISYQSYFHERWFP 119

Query: 121 FG 123
           FG
Sbjct: 121 FG 119

[Close]

BLAST of Carg06937 vs. ExPASy TrEMBL
Match: A0A0A0KZ55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280660 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51
Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARY YY+RYPYLEYLTLPPLQLCVF  ILL+VMAFSWY FY SFLED IFQLKLFLLTV
Sbjct: 1   MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTV 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PLLLLLLLHLLS G  FL+PLPEQ+SLHRAGGSPWGVAILLVF LYVISHQSHYH+RWFP
Sbjct: 61  PLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQSHYHQRWFP 120

Query: 121 FGYR 125
           FGYR
Sbjct: 121 FGYR 124

[Close]

BLAST of Carg06937 vs. ExPASy TrEMBL
Match: A0A061GR99 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_040264 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.4e-33
Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  +L+YL+LPPL LC F  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RDSFLDYLSLPPLHLCFFVSILFFVLGFSWYINYESMFEDFINQLKFFLMLS 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLL+H  S  +PFL+PLPEQ+SLHR GGSPWGVA+LLVFLLY+IS+QS +H RWFP
Sbjct: 61  PVVLLLLIHCFSGSVPFLIPLPEQDSLHRTGGSPWGVALLLVFLLYMISYQSSFHERWFP 119

Query: 121 FG 123
            G
Sbjct: 121 LG 119

[Close]

BLAST of Carg06937 vs. ExPASy TrEMBL
Match: A0A6P5ZU06 (uncharacterized protein LOC111304026 OS=Durio zibethinus OX=66656 GN=LOC111304026 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32
Identity = 77/120 (64.17%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   RY +L+YL+ PP+ LC+F  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RYSFLDYLSPPPVHLCLFVFILFFVLGFSWYINYESMFEDFINQLKFFLMLT 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PL+LL+L+H LS  +PFL+PLPEQ+SLHRAGGSPWGVA++LVFLLY+IS+QS +H RWFP
Sbjct: 61  PLVLLVLVHCLSGRVPFLIPLPEQDSLHRAGGSPWGVALVLVFLLYMISYQSSFHERWFP 117

[Close]

BLAST of Carg06937 vs. ExPASy TrEMBL
Match: A0A6J0ZX76 (uncharacterized protein LOC110412707 OS=Herrania umbratica OX=108875 GN=LOC110412707 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32
Identity = 78/122 (63.93%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  +L+YL+LPPL LCVF  IL  V+ FSWYI Y+S  ED I QLK FL+  
Sbjct: 1   MARYY---RDSFLDYLSLPPLHLCVFVSILFFVLGFSWYINYESMFEDFINQLKFFLMLS 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLL+H  S  +PFL+PLPEQ+SLHRAGGSPWGVA++LVFLLY+IS+QS +  RWFP
Sbjct: 61  PVVLLLLVHCFSGSVPFLIPLPEQDSLHRAGGSPWGVALVLVFLLYMISYQSSFQERWFP 119

Query: 121 FG 123
            G
Sbjct: 121 LG 119

[Close]

BLAST of Carg06937 vs. ExPASy TrEMBL
Match: A0A5J5NVD3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G234100v1 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MARYY   R  Y++YL+LPPL LC F  IL  V+ FSWY+ Y+S LED + QLK FL+  
Sbjct: 1   MARYY---RDSYMDYLSLPPLHLCFFISILFFVLGFSWYLNYESVLEDFMNQLKFFLMLA 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           P++LLLLLH  S  +P L+P PE++SLHRAGGSPWGVA++LV LLY+IS+QS++H RWFP
Sbjct: 61  PIVLLLLLHCFSGRVPSLIPEPEKDSLHRAGGSPWGVALVLVLLLYMISYQSYFHERWFP 119

Query: 121 FG 123
           FG
Sbjct: 121 FG 119

[Close]

BLAST of Carg06937 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 115.9 bits (289), Expect = 2.3e-26
Identity = 62/122 (50.82%), Postives = 85/122 (69.67%), Query Frame = 0


Query: 1   MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTV 60
           MAR  YY    YL+YL+LP   LC    ++  V++F+WY+ ++S +ED +  LKL  +  
Sbjct: 1   MARSPYYGS-SYLDYLSLPNPHLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFT 60

Query: 61  PLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 120
           PL LLLL+H  S GL F VP PEQ+S+HRAG SPWGVA +LV +L+++S+QS +  RWFP
Sbjct: 61  PLFLLLLVHFFSGGLSFYVPWPEQDSIHRAGSSPWGVAAVLVLILFMVSYQSDFQERWFP 120

Query: 121 FG 123
           FG
Sbjct: 121 FG 121

[Close]

BLAST of Carg06937 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-19
Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 20  PLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLS----LG- 79
           PL LCVF  ILL+ +  SWY  Y+  +E   +Q KL L+  PLLLLL +H LS    +G 
Sbjct: 12  PLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFLSDDQGVGG 71

Query: 80  -LPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 121
            +  L+ L E+ SL+RAGG+PWGVA +LVFL +++S+QS +  RWFP
Sbjct: 72  MMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWFP 118

[Close]

BLAST of Carg06937 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 37/108 (34.26%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 19  PPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLL------HLLS 78
           PPL L     I+ L++  S Y  Y   +E     LKLF+L +P+L + +L      H L 
Sbjct: 28  PPLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLSFVHRLL 87

Query: 79  LGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSHYHRRWFP 121
               + V   +  SL   G  PWGV ++L+ LL ++S QS++H  W+P
Sbjct: 88  FKSSYSVRANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLWYP 135

The following BLAST results are available for this feature:

BLAST of Carg06937 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570356.1	7.7e-61	100.00	hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_007014761.1	1.5e-32	63.93	PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao] >EOY32380.1 Unc...	[more]
XP_022756288.1	2.6e-32	64.17	uncharacterized protein LOC111304026 [Durio zibethinus]	[more]
XP_021278994.1	3.4e-32	63.93	uncharacterized protein LOC110412707 [Herrania umbratica]	[more]
XP_012462541.1	4.9e-31	61.48	PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii] >XP_016734...	[more]

BLAST of Carg06937 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg06937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ55	2.7e-51	87.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280660 PE=4 SV=1	[more]
A0A061GR99	7.4e-33	63.93	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_040264 PE=4 SV=1	[more]
A0A6P5ZU06	1.3e-32	64.17	uncharacterized protein LOC111304026 OS=Durio zibethinus OX=66656 GN=LOC11130402...	[more]
A0A6J0ZX76	1.6e-32	63.93	uncharacterized protein LOC110412707 OS=Herrania umbratica OX=108875 GN=LOC11041...	[more]
A0A5J5NVD3	2.4e-31	61.48	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G234100v1 PE...	[more]

BLAST of Carg06937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19875.1	2.3e-26	50.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT2G31940.1	1.6e-19	49.53	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembra...	[more]
AT5G42146.1	1.4e-07	34.26	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306:SF24	EXPRESSED PROTEIN	coord: 1..122
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06937-RA	Carg06937-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane