Carg06872 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg06872
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAvrRpt-cleavage domain-containing protein
LocationCarg_Chr20: 539066 .. 540359 (+)
RNA-Seq ExpressionCarg06872
SyntenyCarg06872
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTTGCATTTATTTTCTATTCGGTGCTACAGTTCTCCCACCCCATCCTCCCCTCTTCAGGCCGTATGGATTCTCGTACGGAGGTAATGCGATAATACGTTCTTCCATTCATTTAGTTCAGATTATCACATCAGTTTCTTTCGATTTCCATCCTTTGTTTTGAAAAAACGAATTCATCGTTGTTTAGATTATGGTTTTCGTTGAATCTTGTTGAATCTTGGCCTTTGTTGTTTCGAAAATTTATTGTCCTAATTCAAGAGAATCGTTGCGTTTCATTCTTGATTCCTGAGCAAAAGATCACCGTAATGGATACAAATCAATCAAGATCGCTAAAAATCGTGAGATGTGGAAGAGAAATATGATGAATCTATTTGAATATGAAACTGAAAGTTTGGTTGGTGTGTGTCTGTGTGTGTGTTTATACAGAATAGGTGGAAATCCGTTCCAGAATTTGGGGGGTGGGATAATAATACGCCTGATGCAAGCAATTATTCCGTTGTATTTTCTCGAGCTCGTGCTAATAAGAAACAGCAAAAGACCGATTTAACTGAGTTCAAAAGAGCCAGCCTAGGGAATGAAAAGGAGTTAATGGCCATCGCGGATAAACATGATCGCCACCACCAGCATCGCCACCGTCACGAACACCGACAGCAACATCACCACCAACGCCACCACCCGCATCATGGTCAATTACCAGTGGATGGCGCTGTTGTCGGGGTAAGCACTTCTAATCGCTGAGTTATGTCCACTTTGATCTGTTCTTTTCCCACTTTTACCTCAAAATCCGATTGACCTAATTTGAACAAGAATTGAATGTAGTTATTAAGAACAGAAGGTGAATGTATATCTCCTAATAGAGTGTTGTTTTTGTTTGTGTAATCCAGCAGAAGAAAAAGAAGATTCTGTCCTGCATGAGTTGTTGTATCAAGCCTTGATATGAGATAAAGAAGGCAACCAACTTCGCTATGTTTTAGTGATATCATGCTGTTTTTCTGGATCTTCTTTTTACTGGCATGTGTAAATGTAGCGAGACATGTTCATCATATGGAAAATAAATGCGTCAATTTCCCCCTCCCTGCGTCATTTTGTGTAGGTTCTTTAGCTTATAAAACATGGAACCTTGTAATATATTCATTTCTTCATGGAAAAAACCAGATGAATACACTATGCAATAACATTATATTTTGTCCTTTTCGACGTTGCTTTGGATCTACAGGGTGGACACAGCCCTTGCAATCTCTGATATTCTGTACATGTCAACTTTCCACCATTTGTTCTACCAGTCTTCACAGT

mRNA sequence

TTTCTTGCATTTATTTTCTATTCGGTGCTACAGTTCTCCCACCCCATCCTCCCCTCTTCAGGCCGTATGGATTCTCGTACGGAGAATAGGTGGAAATCCGTTCCAGAATTTGGGGGGTGGGATAATAATACGCCTGATGCAAGCAATTATTCCGTTGTATTTTCTCGAGCTCGTGCTAATAAGAAACAGCAAAAGACCGATTTAACTGAGTTCAAAAGAGCCAGCCTAGGGAATGAAAAGGAGTTAATGGCCATCGCGGATAAACATGATCGCCACCACCAGCATCGCCACCGTCACGAACACCGACAGCAACATCACCACCAACGCCACCACCCGCATCATGGTCAATTACCAGTGGATGGCGCTGTTGTCGGGCAGAAGAAAAAGAAGATTCTGTCCTGCATGAGTTGTTGTATCAAGCCTTGATATGAGATAAAGAAGGCAACCAACTTCGCTATGTTTTAGTGATATCATGCTGTTTTTCTGGATCTTCTTTTTACTGGCATGTGTAAATGTAGCGAGACATGTTCATCATATGGAAAATAAATGCGTCAATTTCCCCCTCCCTGCGTCATTTTGTGTAGGTTCTTTAGCTTATAAAACATGGAACCTTGTAATATATTCATTTCTTCATGGAAAAAACCAGATGAATACACTATGCAATAACATTATATTTTGTCCTTTTCGACGTTGCTTTGGATCTACAGGGTGGACACAGCCCTTGCAATCTCTGATATTCTGTACATGTCAACTTTCCACCATTTGTTCTACCAGTCTTCACAGT

Coding sequence (CDS)

ATGGATTCTCGTACGGAGAATAGGTGGAAATCCGTTCCAGAATTTGGGGGGTGGGATAATAATACGCCTGATGCAAGCAATTATTCCGTTGTATTTTCTCGAGCTCGTGCTAATAAGAAACAGCAAAAGACCGATTTAACTGAGTTCAAAAGAGCCAGCCTAGGGAATGAAAAGGAGTTAATGGCCATCGCGGATAAACATGATCGCCACCACCAGCATCGCCACCGTCACGAACACCGACAGCAACATCACCACCAACGCCACCACCCGCATCATGGTCAATTACCAGTGGATGGCGCTGTTGTCGGGCAGAAGAAAAAGAAGATTCTGTCCTGCATGAGTTGTTGTATCAAGCCTTGA

Protein sequence

MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP
Homology
[Close]
BLAST of Carg06872 vs. NCBI nr
Match: KAG6570425.1 (hypothetical protein SDJN03_29340, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010301.1 hypothetical protein SDJN02_27094 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 240.4 bits (612), Expect = 8.2e-60
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 119

[Close]
BLAST of Carg06872 vs. NCBI nr
Match: XP_023512837.1 (dendritic arbor reduction protein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.4 bits (607), Expect = 3.1e-59
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQHRHRHEHR QHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHRHRHEHRHQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 119

[Close]
BLAST of Carg06872 vs. NCBI nr
Match: XP_022943522.1 (dendritic arbor reduction protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 237.7 bits (605), Expect = 5.3e-59
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPV GAVVGQKKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVGGAVVGQKKKKILSCMSCCIKP 119

[Close]
BLAST of Carg06872 vs. NCBI nr
Match: XP_023512838.1 (dendritic arbor reduction protein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQHRHRHEHR QHHHQRHHPHHGQLPVDGAVVG KKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHRHRHEHRHQHHHQRHHPHHGQLPVDGAVVG-KKKKILSCMSCCIKP 118

[Close]
BLAST of Carg06872 vs. NCBI nr
Match: XP_022943523.1 (dendritic arbor reduction protein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 231.1 bits (588), Expect = 5.0e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPV GAVVG KKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVGGAVVG-KKKKILSCMSCCIKP 118

[Close]
BLAST of Carg06872 vs. ExPASy TrEMBL
Match: A0A6J1FT95 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPV GAVVGQKKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVGGAVVGQKKKKILSCMSCCIKP 119

[Close]
BLAST of Carg06872 vs. ExPASy TrEMBL
Match: A0A6J1FX29 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPV GAVVG KKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVGGAVVG-KKKKILSCMSCCIKP 118

[Close]
BLAST of Carg06872 vs. ExPASy TrEMBL
Match: A0A6J1JEB9 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.4e-57
Identity = 114/119 (95.80%), Postives = 114/119 (95.80%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQH HR EHR QHHH RHHPHHGQLP DGAVVGQKKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHHHRREHRHQHHHHRHHPHHGQLPADGAVVGQKKKKILSCMSCCIKP 119

[Close]
BLAST of Carg06872 vs. ExPASy TrEMBL
Match: A0A6J1JCC4 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.0e-55
Identity = 113/119 (94.96%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60
           MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL
Sbjct: 1   MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKEL 60

Query: 61  MAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIKP 120
           MAIADKHDRHHQH HR EHR QHHH RHHPHHGQLP DGAVVG KKKKILSCMSCCIKP
Sbjct: 61  MAIADKHDRHHQHHHRREHRHQHHHHRHHPHHGQLPADGAVVG-KKKKILSCMSCCIKP 118

[Close]
BLAST of Carg06872 vs. ExPASy TrEMBL
Match: A0A0A0KK09 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430670 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-30
Identity = 78/129 (60.47%), Postives = 93/129 (72.09%), Query Frame = 0 

Query: 4   RTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAI 63
           +  NRW+SVPEFGGWD+N P ASNYSVVF++ARA++KQQKTDLTEFK+ SLGNEKELM  
Sbjct: 5   KENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKKTSLGNEKELMEA 64

Query: 64  ADKHDRHHQHR-HRHEHRQQHHH-----------QRHHPHHGQLPV-DGAVVGQKKKKIL 120
            DKH RH +HR HRH HR  HHH             HH HH Q P  D +V  +KKKKIL
Sbjct: 65  VDKHHRHQKHRHHRHRHRHHHHHHHDHDHDHEHQHHHHQHHHQSPPGDDSVGPEKKKKIL 124

[Close]
BLAST of Carg06872 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 74.7 bits (182), Expect = 5.6e-14
Identity = 54/121 (44.63%), Postives = 71/121 (58.68%), Query Frame = 0 

Query: 1   MDSRTEN-RWKSVPEFGGWDNNTP-DASNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 60
           MD R EN  W  VP+FGGWD   P DA+NYSVVFS+ARAN+KQ K  +   + +SLG+E+
Sbjct: 1   MDKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGV---RHSSLGSEQ 60

Query: 61  ELMAIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCCIK 120
           ELM    ++  H Q  HRHE +               PV       KKK+IL+ ++CCI+
Sbjct: 61  ELMVSVRRN--HQQLHHRHETQDDD------------PV------MKKKRILTYINCCIR 98

[Close]
BLAST of Carg06872 vs. TAIR 10
Match: AT5G09960.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 42/125 (33.60%), Postives = 59/125 (47.20%), Query Frame = 0 

Query: 2   DSRTENR--WKSVPEFGGWDNNTPDA-SNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 61
           D R E    W SVP+FG WD        +YS+ F++ R  +KQ K D +   RASLGNE+
Sbjct: 3   DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPS---RASLGNEE 62

Query: 62  ELM-----AIADKHDRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCM 119
           EL+     A +       Q  ++ E    HHHQ H P               ++ + SC 
Sbjct: 63  ELIKPPESATSTAELTTVQSENQREFSPSHHHQPHSP-------------STRRSMFSCF 111

The following BLAST results are available for this feature:
BLAST of Carg06872 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570425.18.2e-60100.00hypothetical protein SDJN03_29340, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023512837.13.1e-5999.16dendritic arbor reduction protein 1 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022943522.15.3e-5999.16dendritic arbor reduction protein 1 isoform X1 [Cucurbita moschata][more]
XP_023512838.12.9e-5798.32dendritic arbor reduction protein 1 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022943523.15.0e-5798.32dendritic arbor reduction protein 1 isoform X2 [Cucurbita moschata][more]
BLAST of Carg06872 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg06872 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FT952.6e-5999.16dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1FX292.4e-5798.32dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1JEB95.4e-5795.80dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1JCC45.0e-5594.96dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A0A0KK091.9e-3060.47AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G43... [more]
BLAST of Carg06872 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G19473.15.6e-1444.63RPM1-interacting protein 4 (RIN4) family protein [more]
AT5G09960.11.4e-0433.60FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 10..40
e-value: 2.3E-7
score: 30.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..97
NoneNo IPR availablePANTHERPTHR33882:SF11RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEINcoord: 2..118
NoneNo IPR availablePANTHERPTHR33882PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEINcoord: 2..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06872-RACarg06872-RAmRNA