Carg06870 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06870
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein
Location	Carg_Chr20: 546947 .. 550775 (+)
RNA-Seq Expression	Carg06870
Synteny	Carg06870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATTATTGAGTTTTTAAGGTTTATTACTTCGTTTGATTGTATCCACACAATAATACCCTCCAAAAATCTACTTCTTCTTCGAGCCTCGAACGCCCATTAAATACTTGCCTTTCTCCTTTGGTCTTGCACACAACCTGTTTGATTATTTGCTCAAGAGAGGGATTGAGGGGGATTGACAGCTCCGTGAGTGGTGGTGAAGGATTTGATGGTCTTTTGATGAGGAAGACGACTTCGTTTTGAGGTGAGAATAAAGGACCCCAAATTCTTCATCACTTTCATCATCATTATCATCATATCCTCAAATCCATCTCTTTTTACCTCTTCTTCTTTGTTGCCATTAGTTCAAGATCTCAGTGTCCTTGTCTCGTGTGTAATTTCTACATTTCTTACAGTTCTAAGTTGTTGGGTGCACCCATCTGTGGCTTCTGTTCTAACCCAACAGCCCCGATCTGTTTGTTTGCCCACCTCATTCTTTTGGTTTAAATCTTTTTTAAGAAACGAAATCAGAGATTTTGGAGATATGGGTCATTGCATCTAGACTCTTTAGCTTTATTATCCTTAATTTTCCCCCTCTTGGGGTTCCAGGTGTCAGAAAACCACAATTGATTTGAGACTGCCCCACTTAATCGACAAGCTTCATTCGTGGGTTCATCCAATACAACCTATTTAACTCTCCTCCCCTGATTTTTATTTGAATAACAGCTGGGTTTGGGCGTTTTCTACGTTTGAATGCTTTAAAGGAAGAAAGATTGAGAAGCTGAGGAAGCTGTAAGTTAAGCCGAAGTTTCAACACCAGAGTTTGTCTTGTGAGGTGGCTAAAGGCACCTCTAGTTTGCTCTGTTAGAGTTTGGCGAGGAGGCCCACCGTTGGGGTTGGTGGGCTTATTTGATCGGATTAGAACCCTCATCTGAAATGTGCCTCAGGCTCCCATACTAAGCTTACCTTTTCCCCTTGTTAACCATTGTGTTCTTCCCACAGTTGGTTCTTCCATTGATCTTTTCCACTGTCTTTTCTTTGATAAATACCTCTTTTGTGATGCTTCTTTGTTTCTTCCTTACATGTATTTCCTTCATTTTCTTTTCAAGGTCCCTCCTTCTCAAACCTCTCCCATCATGGGCAGGTGAGATGAGGTTCTTGTCCCATTGGCTATGGAAAGAATTATCGTTCCTTCCCATCTACAAGGTGATCAAGAATAGTTTTTGTACTTATATATCTAGTATTCCATCCAATATATCCTTTAAAAAGAAGCATCTTTCGAAAGTAGAGAATGTTGAGGAAAGTGATGCGATGTCCGTGTTGGACTTGCCGGAATTGGCTTTAGAATGCATTCTAGAGAGTCTTCCACCTGATGCTCTTTGCAGTATGGCGGGTGTTTGTAGATCATTGAGAGAGAGATGCATAAGTGACCATCTTTGGGAGAAGCACATGAAAAGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGCATCTTGCTTCTAGAGCGGGTGCGGGTAACCTTAAGCAAAACAATCAAAGGAGCTTAATTAGACTTTTTTCCTTTGGTTGGTCTCTTTCATGGATTAGATCAAAGGTTCATGACAAGAACACGCCACGTAATTCTCTACCGGTTGATTCTATCATGGCTTGGTATCTTGCTCTTGAAACTGGCAAATTCTGGTTCCCGGCGCAGGTCTATAACCGTGAGGTAAACAACTAGTGATCATATACTTCAATTTGTTAACTAACTTCTTTTTTATGTATTCAGATTTCACCCCTTCTCATCATTAAGTTTTTAGCTCTTCCTGATCTAAATATTCAATTATGCAGAATGGCCATGTTGGTTTCATGTTGTCTTGCTATGATGCGGAGCTTTGCTATGATCCCCGTTCGGACACCTTCCAAGCGAGGTGATTAAGCGAACTGCCCTTGTGTAACTCGATCGCGCAATTATCGTGCTGTTACCGCCTTTCTTTTACTTAGTTTCATTACAGTAGTAGTAAATGGACTGTTTGTTACAGGTATCCTCCACATGGTAGGCGAGCAATCGCACTAGAAAACGGGGTGGAATGGGAGAGGCTTAGAGCACCACCCATCGATACTCCTCCGCACAATCTTCATGTCTCCGACTGTTTGAACGAATTATTCCCTGGTGACCATGTTGAGATACAGTGGAGAAAGAACAAAGATTTCCCTTATGGTTTGTTCTTGAGCCTAGATCTATTTTCAGCTTTGGAATTATCTTATAGAATTTCTACCTGTTCTGACTCCTTATAAAAGAACTTTGTTTCGTATTAATATACTTAAAAAGAAAAGTAATCATATCAAGAAGCCTTCACTCCTTAATAGAAGAGATAAATAAGGAAAACATGAACTGTTGTAACCTTTTGTAGCTTTGTTTGAGTCGTTAGTTAATTTAAGGGGTTGTAAAATATGGCATGTACATTGCAGGTTGGTGGTACGGAGTTGTAGGTCACTTGGAAACATGTGATGGGAATAATATTCACTGCAGATGTCATTACAGTGGTGAGTTTTATTCGGCACTTTTAATTTAAGCATTTATTTTGGATTGTTCCTTGGTGTGTGTGTGTTCTGAAATCTTGATTATGAGATTCAGCTCCAAATATAAACCAATTAAATGGAAGATTAGGCATTACTTAAAATGTGGATGAAACGAATGTGGCATGGGCAGAGTCAGTTTGTCTGGGTTGCCATTTCAGCACCCTATCAAAAAGCATCTCATTTTTTAAATGTGAACCAAACTTTTTGTGCTATTTGATTGGTCCCCTAGACATTATTGTCAGTATGTTATTATTTCTACCAACATATTCATAGCTTAGTCTGAGTGGAATTCTTATGTCCAACCACTCATCAATTGAATTGTCTTAGTGGAACGTTTATAGGCCAACCACTCTGACGTAATTGAACGTTTCCCTAAGCCTTTTGAGTCTGTCTTGTACAGTAATGCTATGAATGATCCAGTCTCTTCTACGCTACCGGTAATAATAGAAAGAAGCAAAAGAACATTCTCCTGTACCTCTAACCTTTTGGTCAAGAATATAATGCTTTAACAAATTGAGTTATACTAAGTTGACAGCAAAAGAACATTCTCCTGTACCTCTAACCTTTTGGTCAAGAATATAATGCTTTAACAAATTGAGTTATACTAAGTTGACACTCTTACGTATTAATGATGAAGACTAAAAGTGGTTGTTTATATGTAAATTTTGTCGATAGACACTGTGGTATTAGAGTTCAATCAGTACAACCCGGGTTCGAGATGGAGACTCGCAAGTATTAACCGAAAAGAACATCGAGAGGAAGGCAACGAGATTGACGGGTTCTACGGAGGAATCAGAAAGCTTCGGTTCGATGAAGAAATTTTGATGTGGAAGCAACTTTGGCCTACAGACATCTTGGAGTAGTAGATCCTTCTTCTTCCTTTTGTATAAACCAATTGTTTTGCGTTGTTCAGGATACGAAAAGTGATGACAGCAGAAGAAGATAAAAGGGAATCTGTATGGATTCATTGATGTGAAGAGCATAGCTGTCTACTCTCCTTCCCACATTGTTGAGTTAATCTATTGCTTTCAATGTTATTTTGTTCCTTCTTTTTTGGTGGGAATCTCTCGTCGCTTTAATGCGATTTGTTGTCCTTCTAAAATTGCCTCCCTCTCATGCCTACATTCATGTTCAACACACACACAAGAGAACTCATGATTTTATAATACAATGTTGGGTAGTTGAGCGTCCCTTTCTTCCTTTCCGTTGTTGTTGTCGCGAGACAAATTTCAAGAGTTGTAGCTTTTAGGGCATCATATGCCTTTCTTTC

mRNA sequence

TTTTAATTATTGAGTTTTTAAGGTTTATTACTTCGTTTGATTGTATCCACACAATAATACCCTCCAAAAATCTACTTCTTCTTCGAGCCTCGAACGCCCATTAAATACTTGCCTTTCTCCTTTGGTCTTGCACACAACCTGTTTGATTATTTGCTCAAGAGAGGGATTGAGGGGGATTGACAGCTCCGTGAGTGGTGGTGAAGGATTTGATGGTCTTTTGATGAGGAAGACGACTTCGTTTTGAGGTGAGAATAAAGGACCCCAAATTCTTCATCACTTTCATCATCATTATCATCATATCCTCAAATCCATCTCTTTTTACCTCTTCTTCTTTGTTGCCATTAGTTCAAGATCTCAGTGTCCTTGTCTCGTGTGTAATTTCTACATTTCTTACAGTTCTAAGTTGTTGGGTGCACCCATCTGTGGCTTCTGTTCTAACCCAACAGCCCCGATCTGTTTGTTTGCCCACCTCATTCTTTTGGTTTAAATCTTTTTTAAGAAACGAAATCAGAGATTTTGGAGATATGGGTCATTGCATCTAGACTCTTTAGCTTTATTATCCTTAATTTTCCCCCTCTTGGGGTTCCAGGTGTCAGAAAACCACAATTGATTTGAGACTGCCCCACTTAATCGACAAGCTTCATTCGTGGGTTCATCCAATACAACCTATTTAACTCTCCTCCCCTGATTTTTATTTGAATAACAGCTGGGTTTGGGCGTTTTCTACGTTTGAATGCTTTAAAGGAAGAAAGATTGAGAAGCTGAGGAAGCTGTAAGTTAAGCCGAAGTTTCAACACCAGAGTTTGTCTTGTGAGGTGGCTAAAGGCACCTCTAGTTTGCTCTGTTAGAGTTTGGCGAGGAGGCCCACCGTTGGGGTTGGTGGGCTTATTTGATCGGATTAGAACCCTCATCTGAAATGTGCCTCAGGCTCCCATACTAAGCTTACCTTTTCCCCTTGTTAACCATTGTGTTCTTCCCACAGTTGGTTCTTCCATTGATCTTTTCCACTGTCTTTTCTTTGATAAATACCTCTTTTGTGATGCTTCTTTGTTTCTTCCTTACATGTATTTCCTTCATTTTCTTTTCAAGGTCCCTCCTTCTCAAACCTCTCCCATCATGGGCAGGTGAGATGAGGTTCTTGTCCCATTGGCTATGGAAAGAATTATCGTTCCTTCCCATCTACAAGGTGATCAAGAATAGTTTTTGTACTTATATATCTAGTATTCCATCCAATATATCCTTTAAAAAGAAGCATCTTTCGAAAGTAGAGAATGTTGAGGAAAGTGATGCGATGTCCGTGTTGGACTTGCCGGAATTGGCTTTAGAATGCATTCTAGAGAGTCTTCCACCTGATGCTCTTTGCAGTATGGCGGGTGTTTGTAGATCATTGAGAGAGAGATGCATAAGTGACCATCTTTGGGAGAAGCACATGAAAAGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGCATCTTGCTTCTAGAGCGGGTGCGGGTAACCTTAAGCAAAACAATCAAAGGAGCTTAATTAGACTTTTTTCCTTTGGTTGGTCTCTTTCATGGATTAGATCAAAGGTTCATGACAAGAACACGCCACGTAATTCTCTACCGGTTGATTCTATCATGGCTTGGTATCTTGCTCTTGAAACTGGCAAATTCTGGTTCCCGGCGCAGGTCTATAACCGTGAGAATGGCCATGTTGGTTTCATGTTGTCTTGCTATGATGCGGAGCTTTGCTATGATCCCCGTTCGGACACCTTCCAAGCGAGGTATCCTCCACATGGTAGGCGAGCAATCGCACTAGAAAACGGGGTGGAATGGGAGAGGCTTAGAGCACCACCCATCGATACTCCTCCGCACAATCTTCATGTCTCCGACTGTTTGAACGAATTATTCCCTGGTGACCATGTTGAGATACAGTGGAGAAAGAACAAAGATTTCCCTTATGGTTGGTGGTACGGAGTTGTAGGTCACTTGGAAACATGTGATGGGAATAATATTCACTGCAGATGTCATTACAGTGACACTGTGGTATTAGAGTTCAATCAGTACAACCCGGGTTCGAGATGGAGACTCGCAAGTATTAACCGAAAAGAACATCGAGAGGAAGGCAACGAGATTGACGGGTTCTACGGAGGAATCAGAAAGCTTCGGTTCGATGAAGAAATTTTGATGTGGAAGCAACTTTGGCCTACAGACATCTTGGAGTAGTAGATCCTTCTTCTTCCTTTTGTATAAACCAATTGTTTTGCGTTGTTCAGGATACGAAAAGTGATGACAGCAGAAGAAGATAAAAGGGAATCTGTATGGATTCATTGATGTGAAGAGCATAGCTGTCTACTCTCCTTCCCACATTGTTGAGTTAATCTATTGCTTTCAATGTTATTTTGTTCCTTCTTTTTTGGTGGGAATCTCTCGTCGCTTTAATGCGATTTGTTGTCCTTCTAAAATTGCCTCCCTCTCATGCCTACATTCATGTTCAACACACACACAAGAGAACTCATGATTTTATAATACAATGTTGGGTAGTTGAGCGTCCCTTTCTTCCTTTCCGTTGTTGTTGTCGCGAGACAAATTTCAAGAGTTGTAGCTTTTAGGGCATCATATGCCTTTCTTTC

Coding sequence (CDS)

ATGCTTCTTTGTTTCTTCCTTACATGTATTTCCTTCATTTTCTTTTCAAGGTCCCTCCTTCTCAAACCTCTCCCATCATGGGCAGGTGAGATGAGGTTCTTGTCCCATTGGCTATGGAAAGAATTATCGTTCCTTCCCATCTACAAGGTGATCAAGAATAGTTTTTGTACTTATATATCTAGTATTCCATCCAATATATCCTTTAAAAAGAAGCATCTTTCGAAAGTAGAGAATGTTGAGGAAAGTGATGCGATGTCCGTGTTGGACTTGCCGGAATTGGCTTTAGAATGCATTCTAGAGAGTCTTCCACCTGATGCTCTTTGCAGTATGGCGGGTGTTTGTAGATCATTGAGAGAGAGATGCATAAGTGACCATCTTTGGGAGAAGCACATGAAAAGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGCATCTTGCTTCTAGAGCGGGTGCGGGTAACCTTAAGCAAAACAATCAAAGGAGCTTAATTAGACTTTTTTCCTTTGGTTGGTCTCTTTCATGGATTAGATCAAAGGTTCATGACAAGAACACGCCACGTAATTCTCTACCGGTTGATTCTATCATGGCTTGGTATCTTGCTCTTGAAACTGGCAAATTCTGGTTCCCGGCGCAGGTCTATAACCGTGAGAATGGCCATGTTGGTTTCATGTTGTCTTGCTATGATGCGGAGCTTTGCTATGATCCCCGTTCGGACACCTTCCAAGCGAGGTATCCTCCACATGGTAGGCGAGCAATCGCACTAGAAAACGGGGTGGAATGGGAGAGGCTTAGAGCACCACCCATCGATACTCCTCCGCACAATCTTCATGTCTCCGACTGTTTGAACGAATTATTCCCTGGTGACCATGTTGAGATACAGTGGAGAAAGAACAAAGATTTCCCTTATGGTTGGTGGTACGGAGTTGTAGGTCACTTGGAAACATGTGATGGGAATAATATTCACTGCAGATGTCATTACAGTGACACTGTGGTATTAGAGTTCAATCAGTACAACCCGGGTTCGAGATGGAGACTCGCAAGTATTAACCGAAAAGAACATCGAGAGGAAGGCAACGAGATTGACGGGTTCTACGGAGGAATCAGAAAGCTTCGGTTCGATGAAGAAATTTTGATGTGGAAGCAACTTTGGCCTACAGACATCTTGGAGTAG

Protein sequence

MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYISSIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRERCISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE

Homology

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BLAST of Carg06870 vs. NCBI nr
Match: KAG7010303.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 851.3 bits (2198), Expect = 3.4e-243
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS
Sbjct: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
           SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER
Sbjct: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180
           CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180

Query: 181 IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240
           IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD
Sbjct: 181 IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240

Query: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQW 300
           PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQW
Sbjct: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQW 300

Query: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360
           RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR
Sbjct: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360

Query: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE
Sbjct: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 395

[Close]

BLAST of Carg06870 vs. NCBI nr
Match: XP_023512744.1 (F-box protein At2g32560 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 846.7 bits (2186), Expect = 8.3e-242
Identity = 392/395 (99.24%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLLCFFLTCISFIFF RSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS
Sbjct: 1   MLLCFFLTCISFIFFLRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
           SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER
Sbjct: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180
           CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNL QNNQRSLIRLFSFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLNQNNQRSLIRLFSFGWSLSW 180

Query: 181 IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240
           IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD
Sbjct: 181 IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240

Query: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQW 300
           PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDH+EIQW
Sbjct: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHIEIQW 300

Query: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360
           RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR
Sbjct: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360

Query: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE
Sbjct: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 395

[Close]

BLAST of Carg06870 vs. NCBI nr
Match: XP_022943518.1 (F-box protein At2g32560 [Cucurbita moschata])

HSP 1 Score: 841.6 bits (2173), Expect = 2.7e-240
Identity = 390/395 (98.73%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLLCFFLTCISFIFF RSLLLKPLPSWAGEMRFLSHWL KELSFLPIYKVIKNSFCTYIS
Sbjct: 1   MLLCFFLTCISFIFFLRSLLLKPLPSWAGEMRFLSHWLGKELSFLPIYKVIKNSFCTYIS 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
           SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALC+MAGVCRSLRER
Sbjct: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCNMAGVCRSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180
           CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180

Query: 181 IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240
           IRSKVHDKNTPRNS+PVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD
Sbjct: 181 IRSKVHDKNTPRNSIPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240

Query: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQW 300
           PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDH+EIQW
Sbjct: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHIEIQW 300

Query: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360
           RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR
Sbjct: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360

Query: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE
Sbjct: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 395

[Close]

BLAST of Carg06870 vs. NCBI nr
Match: XP_022985659.1 (F-box protein At2g32560-like [Cucurbita maxima] >XP_022985660.1 F-box protein At2g32560-like [Cucurbita maxima])

HSP 1 Score: 824.7 bits (2129), Expect = 3.4e-235
Identity = 384/398 (96.48%), Postives = 388/398 (97.49%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLK---PLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCT 60
           MLL FFLTCISFIFF RSLLLK   PLP WAGEMRFLSHWLWKELSFLP YKVIKNSFCT
Sbjct: 1   MLLYFFLTCISFIFFLRSLLLKPLPPLPPWAGEMRFLSHWLWKELSFLPTYKVIKNSFCT 60

Query: 61  YISSIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSL 120
           YISSIPSNISF+KKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSL
Sbjct: 61  YISSIPSNISFEKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSL 120

Query: 121 RERCISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWS 180
           RERCISDHLWEKHMKRKWGK IGQAAYREWQWHLASRAGAGNL QNNQRSLIRLFSFGWS
Sbjct: 121 RERCISDHLWEKHMKRKWGKAIGQAAYREWQWHLASRAGAGNLNQNNQRSLIRLFSFGWS 180

Query: 181 LSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAEL 240
           LSWIRSKVHDKN PRNSLPVDSIMAWYLALETG+FWFPAQVYNRENGHVGFMLSCYDAEL
Sbjct: 181 LSWIRSKVHDKNMPRNSLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAEL 240

Query: 241 CYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVE 300
           CYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDH+E
Sbjct: 241 CYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHIE 300

Query: 301 IQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRK 360
           IQWRKNKDFPYGWWYGVVGHLETCDGN+IHCRCHYSDTVVLEFNQYNPGSRWRLASINRK
Sbjct: 301 IQWRKNKDFPYGWWYGVVGHLETCDGNDIHCRCHYSDTVVLEFNQYNPGSRWRLASINRK 360

Query: 361 EHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           EHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE
Sbjct: 361 EHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 398

[Close]

BLAST of Carg06870 vs. NCBI nr
Match: KAG6570428.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 792.3 bits (2045), Expect = 1.9e-225
Identity = 364/365 (99.73%), Postives = 364/365 (99.73%), Query Frame = 0


Query: 31  MRFLSHWLWKELSFLPIYKVIKNSFCTYISSIPSNISFKKKHLSKVENVEESDAMSVLDL 90
           MRFLSHWLWKELSFLPIYKVIKNSFCTYISSIPSNISFKKKHLSKVENVEESDAMSVLDL
Sbjct: 1   MRFLSHWLWKELSFLPIYKVIKNSFCTYISSIPSNISFKKKHLSKVENVEESDAMSVLDL 60

Query: 91  PELALECILESLPPDALCSMAGVCRSLRERCISDHLWEKHMKRKWGKVIGQAAYREWQWH 150
           PELALECILESLPPDALCSMAGVCRSLRERC SDHLWEKHMKRKWGKVIGQAAYREWQWH
Sbjct: 61  PELALECILESLPPDALCSMAGVCRSLRERCTSDHLWEKHMKRKWGKVIGQAAYREWQWH 120

Query: 151 LASRAGAGNLKQNNQRSLIRLFSFGWSLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETG 210
           LASRAGAGNLKQNNQRSLIRLFSFGWSLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETG
Sbjct: 121 LASRAGAGNLKQNNQRSLIRLFSFGWSLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETG 180

Query: 211 KFWFPAQVYNRENGHVGFMLSCYDAELCYDPRSDTFQARYPPHGRRAIALENGVEWERLR 270
           KFWFPAQVYNRENGHVGFMLSCYDAELCYDPRSDTFQARYPPHGRRAIALENGVEWERLR
Sbjct: 181 KFWFPAQVYNRENGHVGFMLSCYDAELCYDPRSDTFQARYPPHGRRAIALENGVEWERLR 240

Query: 271 APPIDTPPHNLHVSDCLNELFPGDHVEIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRC 330
           APPIDTPPHNLHVSDCLNELFPGDHVEIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRC
Sbjct: 241 APPIDTPPHNLHVSDCLNELFPGDHVEIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRC 300

Query: 331 HYSDTVVLEFNQYNPGSRWRLASINRKEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWP 390
           HYSDTVVLEFNQYNPGSRWRLASINRKEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWP
Sbjct: 301 HYSDTVVLEFNQYNPGSRWRLASINRKEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWP 360

Query: 391 TDILE 396
           TDILE
Sbjct: 361 TDILE 365

[Close]

BLAST of Carg06870 vs. ExPASy Swiss-Prot
Match: Q8RY82 (F-box protein At2g32560 OS=Arabidopsis thaliana OX=3702 GN=At2g32560 PE=2 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.5e-129
Identity = 239/403 (59.31%), Postives = 279/403 (69.23%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLL F +TC+SF FF++SL    LP WA E + L       LSF      IKN F     
Sbjct: 1   MLLYFLITCLSFFFFTKSL---SLPPWASETKTL-------LSFY----FIKNPF----- 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
               N   + KH      +   D MSVLDLPELAL+CIL+ LPP  LCSMA VC SLRER
Sbjct: 61  ---MNTLHQTKHDPASPVI---DQMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRA--------GAGNLKQNNQRSLIRLF 180
           C+SDHLWEKH+K KWGK++G AA+REWQ +++S            GNL      SLIR  
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPAAHREWQCYISSSTYHLDSPHHQTGNLGFAKIISLIR-- 180

Query: 181 SFGWSLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSC 240
               SLS +  +   +    +SLP+DS M+ YL+LETG+FWFPAQVYNRENGHVGFMLSC
Sbjct: 181 ----SLSSVFREDKQRRGYASSLPLDSSMSCYLSLETGRFWFPAQVYNRENGHVGFMLSC 240

Query: 241 YDAELCYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFP 300
           YDAEL YD  +DTFQARYPPHGRRA A+E GV W+R+RA PID  PH LHVSD L EL P
Sbjct: 241 YDAELSYDTHTDTFQARYPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSLKELKP 300

Query: 301 GDHVEIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLA 360
           GDH+EIQWR+NK+FPYGWWYG+V HLE+CDG++ HC CH S+TVVLEFNQY  GSRWR  
Sbjct: 301 GDHIEIQWRRNKEFPYGWWYGLVRHLESCDGDHNHCHCHLSETVVLEFNQYTVGSRWRRT 360

Query: 361 SINRKEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
            I R +H+EEGNE DGFYGGIRKL   EEI MWK+ WP  ILE
Sbjct: 361 MIMR-DHKEEGNEEDGFYGGIRKLNCKEEIAMWKRHWPCSILE 371

[Close]

BLAST of Carg06870 vs. ExPASy Swiss-Prot
Match: Q6NLB1 (F-box protein At2g26850 OS=Arabidopsis thaliana OX=3702 GN=At2g26850 PE=2 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 6.4e-128
Identity = 225/397 (56.68%), Postives = 280/397 (70.53%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLL   +TC+SF FFS+SL     P WA + + L       LSF     +  NS      
Sbjct: 1   MLLYLLITCLSFFFFSKSL---SFPQWASKTKNL-------LSFYFSKYLFTNSLHQITP 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
            + S +  K               MS+LDLP+L L+CILE LPP  LC+MA VC SLRER
Sbjct: 61  DLASPVLGK---------------MSILDLPDLPLDCILELLPPSELCTMARVCSSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGN-LKQNNQRSLIRLFSFGWSLS 180
           C+SDHLWEKH+K KWGK++G +A++EWQ +L+S     +   + +   L ++ S   SLS
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPSAHKEWQCYLSSPYHLDSPHHKTSHLGLAKIISLMRSLS 180

Query: 181 WI-RSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELC 240
            I R   H +  P +S+P+DS M +YL+LETG+FWFPAQVYNRENGHVGFMLSCYDAEL 
Sbjct: 181 SIFRDDDHRRRYP-SSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELS 240

Query: 241 YDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEI 300
           YD  ++TFQARYPPHG+RAIA+E  V WER+RA P+D  PHNL+VSD LNEL PGDH+EI
Sbjct: 241 YDTDTNTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEI 300

Query: 301 QWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKE 360
           QWR+NK+FPYGWWY VVGH+E+CDGN  HC+CH S+ +VLEFNQY  GSRWR   INR++
Sbjct: 301 QWRRNKEFPYGWWYSVVGHMESCDGNLNHCQCHNSEMMVLEFNQYTVGSRWRKTMINRRD 360

Query: 361 HREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           HRE+GNE DGFYGGIRK+   E+I MWK+LWP+ ILE
Sbjct: 361 HREKGNEEDGFYGGIRKINCKEDIEMWKRLWPSSILE 371

[Close]

BLAST of Carg06870 vs. ExPASy Swiss-Prot
Match: Q6NKN8 (F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN=At2g41170 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 6.9e-106
Identity = 179/339 (52.80%), Postives = 233/339 (68.73%), Query Frame = 0


Query: 66  ISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRERCISDH 125
           ++++K+   K +N E+ + MS+LDLP+L L+CILE L P  LC+M  VC  LR++C+SDH
Sbjct: 38  LTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDH 97

Query: 126 LWEKHMKRKWGKVIGQAAYREWQWHLA--------SRAGAGNLKQN-NQRSLIRLFSFGW 185
           LWEKHM+ KWG+++G AA +EW+ H+A        S + +   K N + R +  L  F W
Sbjct: 98  LWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAW 157

Query: 186 SLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAE 245
             S       ++ +     P+DS+M WY  LE GKFWFPAQVYNRENGHVGFM+SCYDA+
Sbjct: 158 LSS--NHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAK 217

Query: 246 LCYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHV 305
           + YD ++DTFQARY  HGRR  A E  V W+RLR    DT   +LHVSDCL+ L PGDH 
Sbjct: 218 IRYDFKTDTFQARYSAHGRR--AAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHF 277

Query: 306 EIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINR 365
           EIQWR+ K+FPYGWW+G+VGHL+ CDG   +CRC   + VV+EF Q+ P S WR   I R
Sbjct: 278 EIQWRRTKEFPYGWWFGIVGHLQNCDGVQ-NCRCDSDENVVMEFRQFRPESPWRRTVIKR 337

Query: 366 KEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           K+HRE GNE +GFYGG++KL  +EEI  WKQLWP+  LE
Sbjct: 338 KDHRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE 371

[Close]

BLAST of Carg06870 vs. ExPASy TrEMBL
Match: A0A6J1FX26 (F-box protein At2g32560 OS=Cucurbita moschata OX=3662 GN=LOC111448268 PE=4 SV=1)

HSP 1 Score: 841.6 bits (2173), Expect = 1.3e-240
Identity = 390/395 (98.73%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLLCFFLTCISFIFF RSLLLKPLPSWAGEMRFLSHWL KELSFLPIYKVIKNSFCTYIS
Sbjct: 1   MLLCFFLTCISFIFFLRSLLLKPLPSWAGEMRFLSHWLGKELSFLPIYKVIKNSFCTYIS 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
           SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALC+MAGVCRSLRER
Sbjct: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCNMAGVCRSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180
           CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180

Query: 181 IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240
           IRSKVHDKNTPRNS+PVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD
Sbjct: 181 IRSKVHDKNTPRNSIPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240

Query: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQW 300
           PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDH+EIQW
Sbjct: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHIEIQW 300

Query: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360
           RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR
Sbjct: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360

Query: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE
Sbjct: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 395

[Close]

BLAST of Carg06870 vs. ExPASy TrEMBL
Match: A0A6J1JDX1 (F-box protein At2g32560-like OS=Cucurbita maxima OX=3661 GN=LOC111483649 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 1.6e-235
Identity = 384/398 (96.48%), Postives = 388/398 (97.49%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLK---PLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCT 60
           MLL FFLTCISFIFF RSLLLK   PLP WAGEMRFLSHWLWKELSFLP YKVIKNSFCT
Sbjct: 1   MLLYFFLTCISFIFFLRSLLLKPLPPLPPWAGEMRFLSHWLWKELSFLPTYKVIKNSFCT 60

Query: 61  YISSIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSL 120
           YISSIPSNISF+KKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSL
Sbjct: 61  YISSIPSNISFEKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSL 120

Query: 121 RERCISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWS 180
           RERCISDHLWEKHMKRKWGK IGQAAYREWQWHLASRAGAGNL QNNQRSLIRLFSFGWS
Sbjct: 121 RERCISDHLWEKHMKRKWGKAIGQAAYREWQWHLASRAGAGNLNQNNQRSLIRLFSFGWS 180

Query: 181 LSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAEL 240
           LSWIRSKVHDKN PRNSLPVDSIMAWYLALETG+FWFPAQVYNRENGHVGFMLSCYDAEL
Sbjct: 181 LSWIRSKVHDKNMPRNSLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAEL 240

Query: 241 CYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVE 300
           CYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDH+E
Sbjct: 241 CYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHIE 300

Query: 301 IQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRK 360
           IQWRKNKDFPYGWWYGVVGHLETCDGN+IHCRCHYSDTVVLEFNQYNPGSRWRLASINRK
Sbjct: 301 IQWRKNKDFPYGWWYGVVGHLETCDGNDIHCRCHYSDTVVLEFNQYNPGSRWRLASINRK 360

Query: 361 EHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           EHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE
Sbjct: 361 EHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 398

[Close]

BLAST of Carg06870 vs. ExPASy TrEMBL
Match: A0A0A0KK05 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430140 PE=4 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 2.2e-211
Identity = 344/396 (86.87%), Postives = 363/396 (91.67%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLLCFFLTCISFI F +SL LKPLP WA EMRFLSHW WKELSF PIYKVIKNS CTY  
Sbjct: 1   MLLCFFLTCISFILFLKSLSLKPLPLWADEMRFLSHWFWKELSFFPIYKVIKNSLCTYTF 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
            I S +SFKKK+LSKVENVEES  MSVLDLPELALECILE LPPDALCSMAGVC SLRER
Sbjct: 61  CISSKMSFKKKYLSKVENVEESGEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180
           CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAG  NLKQN Q+SLIRLFSFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGESNLKQNKQKSLIRLFSFGWSLSW 180

Query: 181 IRSKVHD-KNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCY 240
           IRSKV++  NTPR  LPVDSIMAWYLALETG+FWFPAQVYNRENGHVGFMLSCYDAELCY
Sbjct: 181 IRSKVNENSNTPRTFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELCY 240

Query: 241 DPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQ 300
           D R+DTFQARYPPHGRRAIA+ENGV+WERLR+PPIDTPPH+LHVSDCLNEL+PGDH+EIQ
Sbjct: 241 DLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELWPGDHIEIQ 300

Query: 301 WRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEH 360
           WRKNKDFPYGWWYGVVGHLETCDG+  HC CHYSDTVVLEFNQY PGSRWRLA I+RK+H
Sbjct: 301 WRKNKDFPYGWWYGVVGHLETCDGDANHCSCHYSDTVVLEFNQYTPGSRWRLAIIDRKDH 360

Query: 361 REEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           REEGNE+DGFYGGIRKL  +EEI MWKQLWPTDILE
Sbjct: 361 REEGNEVDGFYGGIRKLYSNEEISMWKQLWPTDILE 396

[Close]

BLAST of Carg06870 vs. ExPASy TrEMBL
Match: A0A1S3BN51 (F-box protein At2g32560 OS=Cucumis melo OX=3656 GN=LOC103491462 PE=4 SV=1)

HSP 1 Score: 743.8 bits (1919), Expect = 3.7e-211
Identity = 344/396 (86.87%), Postives = 361/396 (91.16%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLLCFFLTCISFI F +SL LKPLP WA EMRFLSHW WKELS  PIYKVIKNS CTY  
Sbjct: 1   MLLCFFLTCISFILFLKSLSLKPLPLWADEMRFLSHWFWKELSLFPIYKVIKNSLCTYTF 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
            I S +SFKKK+LSKVENVEES  MSVLDLPELALECILE LPPDALCSMAGVC SLRER
Sbjct: 61  CISSKMSFKKKYLSKVENVEESAEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180
           CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAG  NLKQN Q+SLIRLFSFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGESNLKQNKQKSLIRLFSFGWSLSW 180

Query: 181 IRSKVHD-KNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCY 240
           IRSKV+D  NTPRN LPVDSIMAWYLALETG+FWFPAQVYNRENGHVGFMLSCYDAELCY
Sbjct: 181 IRSKVNDNNNTPRNFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELCY 240

Query: 241 DPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQ 300
           D R+DTFQARYPPHGRRAIA+ENGV+WERLR+PPIDTPPH+LHVSDCLNEL PGDH+EIQ
Sbjct: 241 DLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELCPGDHIEIQ 300

Query: 301 WRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEH 360
           WRKNKDFPYGWWYGVVGHLETCDG+  HC CHYSDTVVLEFNQY PGSRWRLA I+RK+H
Sbjct: 301 WRKNKDFPYGWWYGVVGHLETCDGDANHCSCHYSDTVVLEFNQYTPGSRWRLAIIDRKDH 360

Query: 361 REEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           REEGNE+DGFYGGIRKL  DEEI  WKQLWPTD+LE
Sbjct: 361 REEGNEVDGFYGGIRKLYSDEEISTWKQLWPTDVLE 396

[Close]

BLAST of Carg06870 vs. ExPASy TrEMBL
Match: A0A6J1DHU6 (F-box protein At2g26850 OS=Momordica charantia OX=3673 GN=LOC111020636 PE=4 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 1.7e-208
Identity = 334/395 (84.56%), Postives = 361/395 (91.39%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLLCFF+ CISFI F +SL LKPLP WA EMRFLSHWLWKELSFL I KVIKNS CT++ 
Sbjct: 1   MLLCFFIACISFILFLKSLPLKPLPLWADEMRFLSHWLWKELSFLLICKVIKNSLCTFLF 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
           SIPS +S KK++L KVENVEE+  MSVLDLPELALECILE LPPDALCSMAGVC SLRER
Sbjct: 61  SIPSKMSLKKRYLPKVENVEENGEMSVLDLPELALECILERLPPDALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLKQNNQRSLIRLFSFGWSLSW 180
           CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAG  NLKQ+ Q+SL+RL SFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGLNNLKQSKQKSLLRLLSFGWSLSW 180

Query: 181 IRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYD 240
           IRSK +D N+PRNSLPVDSIMAWYLALETG FWFPAQVYNRENGHVGFMLSCYDAELCYD
Sbjct: 181 IRSKANDNNSPRNSLPVDSIMAWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELCYD 240

Query: 241 PRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEIQW 300
           PR+DTFQARYPPHGRRAIA ENGV+WERLRAPP+DTPPH+LH+SD LNEL PGDH+EIQW
Sbjct: 241 PRTDTFQARYPPHGRRAIATENGVQWERLRAPPVDTPPHDLHISDSLNELCPGDHIEIQW 300

Query: 301 RKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHR 360
           RKNK+FPYGWWYGVVGHLETCDGN  HCRCHYSDTVVLEFNQY PGSRWRLA+++RK+HR
Sbjct: 301 RKNKEFPYGWWYGVVGHLETCDGNANHCRCHYSDTVVLEFNQYTPGSRWRLATVDRKDHR 360

Query: 361 EEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           EEGNE+DGFYGGIRKL  DEE  MWK+LWP+DILE
Sbjct: 361 EEGNEVDGFYGGIRKLCSDEETSMWKRLWPSDILE 395

[Close]

BLAST of Carg06870 vs. TAIR 10
Match: AT2G32560.1 (F-box family protein )

HSP 1 Score: 464.2 bits (1193), Expect = 1.1e-130
Identity = 239/403 (59.31%), Postives = 279/403 (69.23%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLL F +TC+SF FF++SL    LP WA E + L       LSF      IKN F     
Sbjct: 1   MLLYFLITCLSFFFFTKSL---SLPPWASETKTL-------LSFY----FIKNPF----- 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
               N   + KH      +   D MSVLDLPELAL+CIL+ LPP  LCSMA VC SLRER
Sbjct: 61  ---MNTLHQTKHDPASPVI---DQMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRA--------GAGNLKQNNQRSLIRLF 180
           C+SDHLWEKH+K KWGK++G AA+REWQ +++S            GNL      SLIR  
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPAAHREWQCYISSSTYHLDSPHHQTGNLGFAKIISLIR-- 180

Query: 181 SFGWSLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSC 240
               SLS +  +   +    +SLP+DS M+ YL+LETG+FWFPAQVYNRENGHVGFMLSC
Sbjct: 181 ----SLSSVFREDKQRRGYASSLPLDSSMSCYLSLETGRFWFPAQVYNRENGHVGFMLSC 240

Query: 241 YDAELCYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFP 300
           YDAEL YD  +DTFQARYPPHGRRA A+E GV W+R+RA PID  PH LHVSD L EL P
Sbjct: 241 YDAELSYDTHTDTFQARYPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSLKELKP 300

Query: 301 GDHVEIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLA 360
           GDH+EIQWR+NK+FPYGWWYG+V HLE+CDG++ HC CH S+TVVLEFNQY  GSRWR  
Sbjct: 301 GDHIEIQWRRNKEFPYGWWYGLVRHLESCDGDHNHCHCHLSETVVLEFNQYTVGSRWRRT 360

Query: 361 SINRKEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
            I R +H+EEGNE DGFYGGIRKL   EEI MWK+ WP  ILE
Sbjct: 361 MIMR-DHKEEGNEEDGFYGGIRKLNCKEEIAMWKRHWPCSILE 371

[Close]

BLAST of Carg06870 vs. TAIR 10
Match: AT2G26850.1 (F-box family protein )

HSP 1 Score: 458.8 bits (1179), Expect = 4.5e-129
Identity = 225/397 (56.68%), Postives = 280/397 (70.53%), Query Frame = 0


Query: 1   MLLCFFLTCISFIFFSRSLLLKPLPSWAGEMRFLSHWLWKELSFLPIYKVIKNSFCTYIS 60
           MLL   +TC+SF FFS+SL     P WA + + L       LSF     +  NS      
Sbjct: 1   MLLYLLITCLSFFFFSKSL---SFPQWASKTKNL-------LSFYFSKYLFTNSLHQITP 60

Query: 61  SIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRER 120
            + S +  K               MS+LDLP+L L+CILE LPP  LC+MA VC SLRER
Sbjct: 61  DLASPVLGK---------------MSILDLPDLPLDCILELLPPSELCTMARVCSSLRER 120

Query: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGN-LKQNNQRSLIRLFSFGWSLS 180
           C+SDHLWEKH+K KWGK++G +A++EWQ +L+S     +   + +   L ++ S   SLS
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPSAHKEWQCYLSSPYHLDSPHHKTSHLGLAKIISLMRSLS 180

Query: 181 WI-RSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELC 240
            I R   H +  P +S+P+DS M +YL+LETG+FWFPAQVYNRENGHVGFMLSCYDAEL 
Sbjct: 181 SIFRDDDHRRRYP-SSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELS 240

Query: 241 YDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHVEI 300
           YD  ++TFQARYPPHG+RAIA+E  V WER+RA P+D  PHNL+VSD LNEL PGDH+EI
Sbjct: 241 YDTDTNTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEI 300

Query: 301 QWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKE 360
           QWR+NK+FPYGWWY VVGH+E+CDGN  HC+CH S+ +VLEFNQY  GSRWR   INR++
Sbjct: 301 QWRRNKEFPYGWWYSVVGHMESCDGNLNHCQCHNSEMMVLEFNQYTVGSRWRKTMINRRD 360

Query: 361 HREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           HRE+GNE DGFYGGIRK+   E+I MWK+LWP+ ILE
Sbjct: 361 HREKGNEEDGFYGGIRKINCKEDIEMWKRLWPSSILE 371

[Close]

BLAST of Carg06870 vs. TAIR 10
Match: AT2G41170.1 (F-box family protein )

HSP 1 Score: 385.6 bits (989), Expect = 4.9e-107
Identity = 179/339 (52.80%), Postives = 233/339 (68.73%), Query Frame = 0


Query: 66  ISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRERCISDH 125
           ++++K+   K +N E+ + MS+LDLP+L L+CILE L P  LC+M  VC  LR++C+SDH
Sbjct: 38  LTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDH 97

Query: 126 LWEKHMKRKWGKVIGQAAYREWQWHLA--------SRAGAGNLKQN-NQRSLIRLFSFGW 185
           LWEKHM+ KWG+++G AA +EW+ H+A        S + +   K N + R +  L  F W
Sbjct: 98  LWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAW 157

Query: 186 SLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAE 245
             S       ++ +     P+DS+M WY  LE GKFWFPAQVYNRENGHVGFM+SCYDA+
Sbjct: 158 LSS--NHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAK 217

Query: 246 LCYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHV 305
           + YD ++DTFQARY  HGRR  A E  V W+RLR    DT   +LHVSDCL+ L PGDH 
Sbjct: 218 IRYDFKTDTFQARYSAHGRR--AAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHF 277

Query: 306 EIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINR 365
           EIQWR+ K+FPYGWW+G+VGHL+ CDG   +CRC   + VV+EF Q+ P S WR   I R
Sbjct: 278 EIQWRRTKEFPYGWWFGIVGHLQNCDGVQ-NCRCDSDENVVMEFRQFRPESPWRRTVIKR 337

Query: 366 KEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE 396
           K+HRE GNE +GFYGG++KL  +EEI  WKQLWP+  LE
Sbjct: 338 KDHRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE 371

The following BLAST results are available for this feature:

BLAST of Carg06870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010303.1	3.4e-243	100.00	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512744.1	8.3e-242	99.24	F-box protein At2g32560 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022943518.1	2.7e-240	98.73	F-box protein At2g32560 [Cucurbita moschata]	[more]
XP_022985659.1	3.4e-235	96.48	F-box protein At2g32560-like [Cucurbita maxima] >XP_022985660.1 F-box protein At...	[more]
KAG6570428.1	1.9e-225	99.73	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg06870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RY82	1.5e-129	59.31	F-box protein At2g32560 OS=Arabidopsis thaliana OX=3702 GN=At2g32560 PE=2 SV=1	[more]
Q6NLB1	6.4e-128	56.68	F-box protein At2g26850 OS=Arabidopsis thaliana OX=3702 GN=At2g26850 PE=2 SV=1	[more]
Q6NKN8	6.9e-106	52.80	F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN=At2g41170 PE=2 SV=1	[more]

BLAST of Carg06870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FX26	1.3e-240	98.73	F-box protein At2g32560 OS=Cucurbita moschata OX=3662 GN=LOC111448268 PE=4 SV=1	[more]
A0A6J1JDX1	1.6e-235	96.48	F-box protein At2g32560-like OS=Cucurbita maxima OX=3661 GN=LOC111483649 PE=4 SV...	[more]
A0A0A0KK05	2.2e-211	86.87	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430140 PE=4 ...	[more]
A0A1S3BN51	3.7e-211	86.87	F-box protein At2g32560 OS=Cucumis melo OX=3656 GN=LOC103491462 PE=4 SV=1	[more]
A0A6J1DHU6	1.7e-208	84.56	F-box protein At2g26850 OS=Momordica charantia OX=3673 GN=LOC111020636 PE=4 SV=1	[more]

BLAST of Carg06870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32560.1	1.1e-130	59.31	F-box family protein	[more]
AT2G26850.1	4.5e-129	56.68	F-box family protein	[more]
AT2G41170.1	4.9e-107	52.80	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 90..130 e-value: 0.0014 score: 27.9
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 85..130 e-value: 2.8E-8 score: 33.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 84..130 score: 10.822189
None	No IPR available	GENE3D	1.20.1280.50		coord: 71..163 e-value: 4.7E-8 score: 34.8
None	No IPR available	PANTHER	PTHR31482	ESTS AU081301(E20138)	coord: 3..395
None	No IPR available	PANTHER	PTHR31482:SF2	ESTS AU081301(E20138)	coord: 3..395
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 80..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06870-RA	Carg06870-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding