Carg06846 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06846
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Autophagy-related protein
Location	Carg_Chr18: 1635079 .. 1636779 (-)
RNA-Seq Expression	Carg06846
Synteny	Carg06846

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGTTTTCGATTCTGTTTCCATTGAACTTCTGGACCTGGATTTTGTGCTGTTGTATTGATCTGATGCTTGAATTCGCAGATATCGTTTGAGATTCCCCATGGCCAAAAGCTCGTTCAAGCTCGAACATCCTCTAGGTTTTTCTTTTTCACAATTTTGACCATTTTGATCATTTCTTGAACTTTATTGTTTATTTAATTTATGTGACGAATCGTGTCAGTTTTCGCGTACTTTTGATACTTAATTGGCCTTCTGATATTCTAATTTAACTTTTTGGGTGGTTAATCCTTGATGTTTTATTCGTTTTTTGTGATTAGTGCCACTCACGTCGGGTATTAATTAGGGTCTGTTCTTATGATTGCGAATGAGCTTCTTTGAACTGTGTAATTGGGGGTAATTTTAAGTTCCTTTCGTCTCTTTTCGCTGGAATCTTGATGTGAGAGGTTTTTTTTCTGGTGAAAACTTGTTTCTGCCTTACATTTGGTCTCCTGGATTAATTGAAAACCAGTCAATTGATTTCTGCGCTTTCTCTCAGCCTCCTTTTGATATTGTTACAGTGTCACATTTAGTTAAACGCTCATTTCCCTTCCAGTCTTGCATGGTCTTTACTTTGTTTTAAACTATTCCTCCAATGTTATAGAAAGGAGACAAGCAGAAGCTGCTCGCATCAGGGAGAAATATCCGGACAGAATTCCCGTAAGAATGTTAAACTTTCATATCAGTGTTCGTCACCTACTGCACTCCAATTTTCTCTGTTAATGTGATTTAAATGCAGGTGATTGTGGAGAAAGCTGAAAGGAGTGACATTCCTGACATTGATAAGAAGAAGTAAGTTCCATAATGACTTGATTTTGTATAAACCAGTTAAAATTGAACTTCTTAACTGAAATCAGCTGAGGGGAGAGGCATTTCATTGTGTTACAACTCCAGAACTTGGTTTCTATGGTTAGCTGCTGGCTTATTCTTTAATCTCCACAAAATATACGAATCGTCGATGCTGAAGTCCTGATTGTCAGATATTATGCTGTGGTTTCTTTTTAATCTAGTGCTGATAGGAAGAACATACATGATGGCAACAGTACCTAGCTCTGTTTGCCAATAATGGAGGAATATTAAGACCATAATTTGAAAGGAGTTTAAAATTCTCGTTGTACATTGGATTGTAAACAATCGGATGGGCAGTTTGTATATACTAACTCTTCGTTGTTACTATGGGGTTTTGAAGCACAAGTAGATTTTACTCGTTGGTGTCAATTAGATGATCTGTGGACGTCAGTTGCTCTCCACGATGGTTTTGGACTAATAGGTTTCATGTTACATCAATTTAAACTCGCTTAATATTTTTACCCTTTTCATGACTTTAGGTACCTTGTCCCTGCTGACCTCACGGTTGGGCAGTTTGTTTATGTTGTCCGGAAAAGGATTAAGCTTAGTTCCGAGAAGGCTATTTTCATCTTTATCCAAAACACACTACCTCCAACTGGTTAGTTGAATTTCTTGTTCTTTTAATATGTACATTTCACTTAGTGTAGCATGAAGAAATGCGTTTGTGTTTGCCTAATTTATGTATTGTCACAGCTGCTTTGATGTCATCAATCTATGAAGATAACAAGGATGAAGATGGTTTTCTTTACATGACCTACAGTGGAGAGAACACCTTTGGATTCTGATGACTTCAAATCATACTTCGTCTGTAAATG

mRNA sequence

TTGTTGTTTTCGATTCTGTTTCCATTGAACTTCTGGACCTGGATTTTGTGCTGTTATATCGTTTGAGATTCCCCATGGCCAAAAGCTCGTTCAAGCTCGAACATCCTCTAGTCTTGCATGGTCTTTACTTTGTTTTAAACTATTCCTCCAATGTTATAGAAAGGAGACAAGCAGAAGCTGCTCGCATCAGGGAGAAATATCCGGACAGAATTCCCGTGATTGTGGAGAAAGCTGAAAGGAGTGACATTCCTGACATTGATAAGAAGAAGTACCTTGTCCCTGCTGACCTCACGGTTGGGCAGTTTGTTTATGTTGTCCGGAAAAGGATTAAGCTTAGTTCCGAGAAGGCTATTTTCATCTTTATCCAAAACACACTACCTCCAACTGCTGCTTTGATGTCATCAATCTATGAAGATAACAAGGATGAAGATGGTTTTCTTTACATGACCTACAGTGGAGAGAACACCTTTGGATTCTGATGACTTCAAATCATACTTCGTCTGTAAATG

Coding sequence (CDS)

ATGGCCAAAAGCTCGTTCAAGCTCGAACATCCTCTAGTCTTGCATGGTCTTTACTTTGTTTTAAACTATTCCTCCAATGTTATAGAAAGGAGACAAGCAGAAGCTGCTCGCATCAGGGAGAAATATCCGGACAGAATTCCCGTGATTGTGGAGAAAGCTGAAAGGAGTGACATTCCTGACATTGATAAGAAGAAGTACCTTGTCCCTGCTGACCTCACGGTTGGGCAGTTTGTTTATGTTGTCCGGAAAAGGATTAAGCTTAGTTCCGAGAAGGCTATTTTCATCTTTATCCAAAACACACTACCTCCAACTGCTGCTTTGATGTCATCAATCTATGAAGATAACAAGGATGAAGATGGTTTTCTTTACATGACCTACAGTGGAGAGAACACCTTTGGATTCTGA

Protein sequence

MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDGFLYMTYSGENTFGF

Homology

[Close]

BLAST of Carg06846 vs. NCBI nr
Match: KAG7012364.1 (Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.0 bits (676), Expect = 3.5e-67
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 134

[Close]

BLAST of Carg06846 vs. NCBI nr
Match: XP_022954812.1 (autophagy-related protein 8C [Cucurbita moschata] >XP_022954813.1 autophagy-related protein 8C [Cucurbita moschata] >XP_022954814.1 autophagy-related protein 8C [Cucurbita moschata] >XP_022954815.1 autophagy-related protein 8C [Cucurbita moschata] >XP_022954816.1 autophagy-related protein 8C [Cucurbita moschata] >XP_023542800.1 autophagy-related protein 8C [Cucurbita pepo subsp. pepo] >XP_023542801.1 autophagy-related protein 8C [Cucurbita pepo subsp. pepo] >XP_023542802.1 autophagy-related protein 8C [Cucurbita pepo subsp. pepo] >XP_023542803.1 autophagy-related protein 8C [Cucurbita pepo subsp. pepo] >XP_023542805.1 autophagy-related protein 8C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54
Identity = 118/134 (88.06%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. NCBI nr
Match: XP_022994202.1 (autophagy-related protein 8C-like [Cucurbita maxima] >XP_022994203.1 autophagy-related protein 8C-like [Cucurbita maxima] >XP_022994204.1 autophagy-related protein 8C-like [Cucurbita maxima] >XP_022994205.1 autophagy-related protein 8C-like [Cucurbita maxima] >XP_022994206.1 autophagy-related protein 8C-like [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 3.4e-54
Identity = 117/134 (87.31%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEA+RIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEASRIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. NCBI nr
Match: XP_008441000.1 (PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_031745360.1 autophagy-related protein 8C [Cucumis sativus] >XP_038895605.1 autophagy-related protein 8C [Benincasa hispida] >XP_038895606.1 autophagy-related protein 8C [Benincasa hispida] >ADN34056.1 gaba(A) receptor-associated protein [Cucumis melo subsp. melo] >KAA0056850.1 autophagy-related protein 8C isoform X1 [Cucumis melo var. makuwa] >KGN64514.1 hypothetical protein Csa_013728 [Cucumis sativus] >TYJ99353.1 autophagy-related protein 8C isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 116/134 (86.57%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFI+NTLPPTAALMSSIYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIKNTLPPTAALMSSIYEENKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. NCBI nr
Match: KAF3325678.1 (autophagy-related protein 8C isoform X1 [Carex littledalei])

HSP 1 Score: 216.9 bits (551), Expect = 1.1e-52
Identity = 112/134 (83.58%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAE+ARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAESARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIF++NTLPPTAA+MS+IYEDNKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAAMMSAIYEDNKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 6.0e-54
Identity = 110/133 (82.71%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MA+SSFKLEHPL                ERRQAEA RIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MARSSFKLEHPL----------------ERRQAEANRIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIF++NTLPPTAALMS+IYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDG 117

Query: 121 FLYMTYSGENTFG 134
           FLYMTYSGENTFG
Sbjct: 121 FLYMTYSGENTFG 117

[Close]

BLAST of Carg06846 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.0e-54
Identity = 110/133 (82.71%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MA+SSFKLEHPL                ERRQAEA RIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MARSSFKLEHPL----------------ERRQAEANRIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIF++NTLPPTAALMS+IYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDG 117

Query: 121 FLYMTYSGENTFG 134
           FLYMTYSGENTFG
Sbjct: 121 FLYMTYSGENTFG 117

[Close]

BLAST of Carg06846 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-53
Identity = 109/133 (81.95%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIF++N LPPTAA+MS+IYE++KDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDG 117

Query: 121 FLYMTYSGENTFG 134
           FLYMTYSGENTFG
Sbjct: 121 FLYMTYSGENTFG 117

[Close]

BLAST of Carg06846 vs. ExPASy Swiss-Prot
Match: A2XXR7 (Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 7.4e-52
Identity = 108/133 (81.20%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKL+H L                ERRQAEA RIREKY DRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLDHTL----------------ERRQAEANRIREKYSDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIF++NTLPPTAALMS+IYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDG 117

Query: 121 FLYMTYSGENTFG 134
           FLYMTYSGENTFG
Sbjct: 121 FLYMTYSGENTFG 117

[Close]

BLAST of Carg06846 vs. ExPASy Swiss-Prot
Match: Q7XPR1 (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B PE=3 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 7.4e-52
Identity = 108/133 (81.20%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKL+H L                ERRQAEA RIREKY DRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLDHTL----------------ERRQAEANRIREKYSDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIF++NTLPPTAALMS+IYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDG 117

Query: 121 FLYMTYSGENTFG 134
           FLYMTYSGENTFG
Sbjct: 121 FLYMTYSGENTFG 117

[Close]

BLAST of Carg06846 vs. ExPASy TrEMBL
Match: A0A6J1GRX6 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456961 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.4e-55
Identity = 118/134 (88.06%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. ExPASy TrEMBL
Match: A0A6J1JV40 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111490011 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.6e-54
Identity = 117/134 (87.31%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEA+RIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEASRIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. ExPASy TrEMBL
Match: A0A5D3BJA1 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005700 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.3e-54
Identity = 116/134 (86.57%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFI+NTLPPTAALMSSIYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIKNTLPPTAALMSSIYEENKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. ExPASy TrEMBL
Match: E5GC57 (Autophagy-related protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.3e-54
Identity = 116/134 (86.57%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFI+NTLPPTAALMSSIYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIKNTLPPTAALMSSIYEENKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. ExPASy TrEMBL
Match: A0A0A0LU79 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_1G062890 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.3e-54
Identity = 116/134 (86.57%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFKLEHPL                ERRQAEAARIREKYPDRIPVIVEKAERSDIPD
Sbjct: 1   MAKSSFKLEHPL----------------ERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFI+NTLPPTAALMSSIYE+NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIKNTLPPTAALMSSIYEENKDEDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLYMTYSGENTFGF
Sbjct: 121 FLYMTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.5e-52
Identity = 102/133 (76.69%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MA SSFKLEHPL                ERRQ E++RIREKYPDRIPVIVE+AERSD+P+
Sbjct: 1   MANSSFKLEHPL----------------ERRQIESSRIREKYPDRIPVIVERAERSDVPN 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIF+F++NTLPPTAA+MS+IY++NKDEDG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDG 117

Query: 121 FLYMTYSGENTFG 134
           FLYMTYSGENTFG
Sbjct: 121 FLYMTYSGENTFG 117

[Close]

BLAST of Carg06846 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.5e-52
Identity = 102/133 (76.69%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MA SSFKLEHPL                ERRQ E++RIREKYPDRIPVIVE+AERSD+P+
Sbjct: 15  MANSSFKLEHPL----------------ERRQIESSRIREKYPDRIPVIVERAERSDVPN 74

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIF+F++NTLPPTAA+MS+IY++NKDEDG
Sbjct: 75  IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDG 131

Query: 121 FLYMTYSGENTFG 134
           FLYMTYSGENTFG
Sbjct: 135 FLYMTYSGENTFG 131

[Close]

BLAST of Carg06846 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.1e-50
Identity = 101/133 (75.94%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MA SSFK EHPL                E+RQAEAARIREKYPDRIPVIVE+AE+SD+PD
Sbjct: 1   MAISSFKHEHPL----------------EKRQAEAARIREKYPDRIPVIVERAEKSDVPD 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           ID+KKYLVPADLTVGQFVYVVRKRIKLS EKAIFIF++N LPPTAA+MS+IYE++KDEDG
Sbjct: 61  IDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDG 117

Query: 121 FLYMTYSGENTFG 134
           FLYM+YSGENTFG
Sbjct: 121 FLYMSYSGENTFG 117

[Close]

BLAST of Carg06846 vs. TAIR 10
Match: AT4G16520.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 194.9 bits (494), Expect = 4.2e-50
Identity = 100/134 (74.63%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFK EH L                E+R+AEAARIREKYPDRIPVIVEKAE+SDIP 
Sbjct: 1   MAKSSFKQEHDL----------------EKRRAEAARIREKYPDRIPVIVEKAEKSDIPT 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYV+RKRIKLS+EKAIFIF+ N LPP  ALMSS+YE+ KD+DG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLY+TYSGENTFGF
Sbjct: 121 FLYVTYSGENTFGF 118

[Close]

BLAST of Carg06846 vs. TAIR 10
Match: AT4G16520.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 194.9 bits (494), Expect = 4.2e-50
Identity = 100/134 (74.63%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MAKSSFKLEHPLVLHGLYFVLNYSSNVIERRQAEAARIREKYPDRIPVIVEKAERSDIPD 60
           MAKSSFK EH L                E+R+AEAARIREKYPDRIPVIVEKAE+SDIP 
Sbjct: 1   MAKSSFKQEHDL----------------EKRRAEAARIREKYPDRIPVIVEKAEKSDIPT 60

Query: 61  IDKKKYLVPADLTVGQFVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDG 120
           IDKKKYLVPADLTVGQFVYV+RKRIKLS+EKAIFIF+ N LPP  ALMSS+YE+ KD+DG
Sbjct: 61  IDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDG 118

Query: 121 FLYMTYSGENTFGF 135
           FLY+TYSGENTFGF
Sbjct: 121 FLYVTYSGENTFGF 118

The following BLAST results are available for this feature:

BLAST of Carg06846 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012364.1	3.5e-67	100.00	Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954812.1	1.5e-54	88.06	autophagy-related protein 8C [Cucurbita moschata] >XP_022954813.1 autophagy-rela...	[more]
XP_022994202.1	3.4e-54	87.31	autophagy-related protein 8C-like [Cucurbita maxima] >XP_022994203.1 autophagy-r...	[more]
XP_008441000.1	1.3e-53	86.57	PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_031745360.1 autophagy...	[more]
KAF3325678.1	1.1e-52	83.58	autophagy-related protein 8C isoform X1 [Carex littledalei]	[more]

BLAST of Carg06846 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YS06	6.0e-54	82.71	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]
Q6Z1D5	6.0e-54	82.71	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C P...	[more]
M1C146	1.8e-53	81.95	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
A2XXR7	7.4e-52	81.20	Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=...	[more]
Q7XPR1	7.4e-52	81.20	Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B P...	[more]

BLAST of Carg06846 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRX6	7.4e-55	88.06	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456961 PE=3 SV=...	[more]
A0A6J1JV40	1.6e-54	87.31	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111490011 PE=3 SV=1	[more]
A0A5D3BJA1	6.3e-54	86.57	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
E5GC57	6.3e-54	86.57	Autophagy-related protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A0A0LU79	6.3e-54	86.57	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_1G062890 PE=3 SV=1	[more]

BLAST of Carg06846 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62040.1	1.5e-52	76.69	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	1.5e-52	76.69	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	1.1e-50	75.94	Ubiquitin-like superfamily protein	[more]
AT4G16520.1	4.2e-50	74.63	Ubiquitin-like superfamily protein	[more]
AT4G16520.2	4.2e-50	74.63	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 30..133 e-value: 4.5E-51 score: 171.4
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 28..134
None	No IPR available	GENE3D	3.10.20.90		coord: 3..134 e-value: 1.9E-56 score: 191.4
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 28..134
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 29..130 e-value: 1.37887E-72 score: 210.01
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 26..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06846-RA	Carg06846-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule