Carg06802 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg06802
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMADS-box transcription factor
LocationCarg_Chr18: 1344728 .. 1347390 (+)
RNA-Seq ExpressionCarg06802
SyntenyCarg06802
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAGGCAAAGTTGAGGTGAAGAGAATTGAAAATCCGACAAGTCGGCAAGTGAGCTTCTCGAAACGTCGGAATGGCGTTTTGAAGAAAGCTTATGAGCTGGCCGTTCTCTGCGACGCCGAGGTCGCCGTCGTCATCTTTTCCCCCTCCGGCAAGGCCTACCAGTTCTCCAGCCATGAGTTCCTACTTCTTTTTCTCTTTTATTTATTTATTTATTCATCTTTGTATTTCCGAGCTTTATTATTAGATACAAAATTGAAATATATTTACGCTCGGTGTGTGTTTGGTTTAATTTTGCGACAGCATAGACGGAACCCTAGCTAGGTACAGAAAGTACGTCGGCCAATCACAATTCAACCATCCGCTTTCACGAGCTCTGGTATTTCATTAGTTAATTGATTATATATTTTGATTTGGGTTAGGGTGGTTTGAAAAATTCGATGATACGAACAACCCTTTGGATTTCGTTCAAATAAATGAAAGTTTTTAATGGGTTACGAGATACTCCTGGAATTCACGATTATGTCTAGGTTTGCATTAGAAATGGTCGAGATGGAGAAAAAAAGAACCCTCTGTTACATCAAGAGTCTTCTCGTAGACATCCAAGAGTTAGTGGCGGCCCACTTTATAACCGCTTCAACTTTGACCGGGTCTACTGATATACCTTCTTTTGTCTCTTGGATGTTTGAAGATCGATGATGAAATAAAGGGTTATTTTCTTCTTTATGTCGACCATCTTGTTGCGAATTTAGAAAGCATGGTGAACTCCAGGTCGTATCGTACTACTCTATCGTCTTATATCGTTGTTTAAAGTTGAGAAATGTCTCTGGGTCTTTTATACAATTATATATACATATATTTATTTTTATTTTTATTCAATATTTAAAAATAAATAAATAGATATTTTTTGCATTAACATTTTACCTCATCTGCGAAACAACTCAATTTAGATATTTTATGATTGGGGTAGGTTCGGTTTATTATTTAGTAATAACCCGAATAAACGGGTTGAATCTAATGCCCTAATCCGACCCGACCCAACTCATAAACGTCCTGTATAGTTTGAAAAATGTTGAGTTCAAGAGCTTAAAGTCCTAGAAATCCGACACGACCTAACTCATAAACACCCTGTATAGTTTGAAAAATGTTGAGTTTACGGGCTTAAAAGCCCTAAAAACCCAACCGGACCCAACTCATAAATACCCTGTATAATTTAAAAAATGTTGAGTTTAACGGCTTAAAGCCCTAAAAACCCGACCTGACCCAACTCATAAAAGTTCTTCATTATTGAATCGTAGGTTTGGAAGAGTGAGATGGAGGACATGAAGAGATCAATAAGCAGCTTAGAGGCAAGATTAAGGTACATTTAAATTTAATTTATAATATTTAACTATTTCACTTTATTAAAAAATAATAATAATAATAATAATAATAAATTACAGTCATTTTTCGGGTGAGGATCTCGAACCGTTGACAATTAAGGAGTTAAAACGGTTAGAAAGACAACTAAGCGTCGGAATCGAACGTGTCCGCTCTAAAATGGTAAATCGCAGCTAATAAATCCTTAAATTAAATAATTTAAAATTTTATTAAACATTTTTTAAATTTTATTTTCGACAGAGACGAATTATATCAGAACATACAAGTCAGCTCAAGAAGAAGGTAAAATCATCGATTTTTACTGCAAGATTTTTATCCGTTATTGTTAAAATTTAACTGTTGGGTTAAATTAAAATTTACTGCAGTATAAGGGTCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGAGTAAAAATTTTCCAAAATTTACCTCTAGAATTAATTTTACCGTTTATTTATTATTTATTTAATGTTTTATGTATTTTCAGCTGAACCAGCTCAAGGATGTGGCTGACACGACCACAAGAGTCTCAGATGCTGATGGTGTCTCTGTACTTGAAATGTTTGTATAACTAAATATAAATATAATCTTAATTTCGTCTTTAACAATTATTAAAGACGGTTCGAGTTCCACGATAAATATATGTGTAACAATTCAAGACCACCGTTGGCGGATGTTATTCTCTTTAGACTTTTCTTTTCGGGCTTCCTCTGAAAATTTTTAAAATGAACGTTTCCATACTCTTATAAATACTGTTTCATTCTTCTCTATAACCGATGTTGGGATCTCAGTACCTAACCCTTTTAGCATACTCTTGTCGTTATTCTTTTTGTAGTTCAAGTTTTATTAATAAAACGACGAAAACCCTAAACTCTGATTCATCGAGAATTTCTTCGACTTATCTTGGAGAATATTACAAAAAAAAAAAATGTAATTTTGGAAGGAATTTATAGGTTCTCAGCATATTCAAGCGGATAAAGTTGATACACGTTCCGTAAAAATCTAGGTAACTTGTGTGGTAGATAAGATAAAAGTAATATATTCCATATAGAAAATATAAAAAGAAATATATTCTTAATTATCCACGAGGTAAAAGTAATATATTCCATAAAGCATTTTTTTTTTTATAGGAATAATATGATTGAGGAAAATAAACATGCTTAAAAAATCGGAGCGAGTTGTGTAAGATAAGTAGATAACGTGATCATGTTATGTTTGTCTAGGATGTGTTGTCCATGGCCACATGGAACGATCACCAAAATTATGTCTACTTCAGCTAG

mRNA sequence

ATGGGAAGAGGCAAAGTTGAGGTGAAGAGAATTGAAAATCCGACAAGTCGGCAAGTGAGCTTCTCGAAACGTCGGAATGGCGTTTTGAAGAAAGCTTATGAGCTGGCCGTTCTCTGCGACGCCGAGGTCGCCGTCGTCATCTTTTCCCCCTCCGGCAAGGCCTACCAGTTCTCCAGCCATGACATAGACGGAACCCTAGCTAGGTACAGAAAGTACGTCGGCCAATCACAATTCAACCATCCGCTTTCACGAGCTCTGGTTTGGAAGAGTGAGATGGAGGACATGAAGAGATCAATAAGCAGCTTAGAGGCAAGATTAAGTCATTTTTCGGGTGAGGATCTCGAACCGTTGACAATTAAGGAGTTAAAACGGTTAGAAAGACAACTAAGCGTCGGAATCGAACGTGTCCGCTCTAAAATGAGACGAATTATATCAGAACATACAAGTCAGCTCAAGAAGAAGTATAAGGGTCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGACTGAACCAGCTCAAGGATGTGGCTGACACGACCACAAGAGTCTCAGATGCTGATGGTGTCTCTGATGTGTTGTCCATGGCCACATGGAACGATCACCAAAATTATGTCTACTTCAGCTAG

Coding sequence (CDS)

ATGGGAAGAGGCAAAGTTGAGGTGAAGAGAATTGAAAATCCGACAAGTCGGCAAGTGAGCTTCTCGAAACGTCGGAATGGCGTTTTGAAGAAAGCTTATGAGCTGGCCGTTCTCTGCGACGCCGAGGTCGCCGTCGTCATCTTTTCCCCCTCCGGCAAGGCCTACCAGTTCTCCAGCCATGACATAGACGGAACCCTAGCTAGGTACAGAAAGTACGTCGGCCAATCACAATTCAACCATCCGCTTTCACGAGCTCTGGTTTGGAAGAGTGAGATGGAGGACATGAAGAGATCAATAAGCAGCTTAGAGGCAAGATTAAGTCATTTTTCGGGTGAGGATCTCGAACCGTTGACAATTAAGGAGTTAAAACGGTTAGAAAGACAACTAAGCGTCGGAATCGAACGTGTCCGCTCTAAAATGAGACGAATTATATCAGAACATACAAGTCAGCTCAAGAAGAAGTATAAGGGTCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGACTGAACCAGCTCAAGGATGTGGCTGACACGACCACAAGAGTCTCAGATGCTGATGGTGTCTCTGATGTGTTGTCCATGGCCACATGGAACGATCACCAAAATTATGTCTACTTCAGCTAG

Protein sequence

MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSHDIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTTRVSDADGVSDVLSMATWNDHQNYVYFS
Homology
[Close]
BLAST of Carg06802 vs. NCBI nr
Match: KAG7012321.1 (MADS-box transcription factor 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 3.1e-107
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK
Sbjct: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT
Sbjct: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180

Query: 181 RVSDADGVSDVLSMATWNDHQNYVYFS 208
           RVSDADGVSDVLSMATWNDHQNYVYFS
Sbjct: 181 RVSDADGVSDVLSMATWNDHQNYVYFS 207

[Close]
BLAST of Carg06802 vs. NCBI nr
Match: KAG6573136.1 (MADS-box transcription factor 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.1 bits (910), Expect = 4.0e-94
Identity = 189/194 (97.42%), Postives = 190/194 (97.94%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDM R+ISSLEARL HFSGEDLEPLTIK
Sbjct: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT
Sbjct: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180

Query: 181 RVSDADGVSDVLSM 195
           RVSDADGVS VL M
Sbjct: 181 RVSDADGVS-VLEM 193

[Close]
BLAST of Carg06802 vs. NCBI nr
Match: XP_022994475.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita maxima])

HSP 1 Score: 354.4 bits (908), Expect = 6.8e-94
Identity = 188/194 (96.91%), Postives = 190/194 (97.94%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDM RSISSLEARL HFSGEDLEPLTIK
Sbjct: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMNRSISSLEARLRHFSGEDLEPLTIK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVA+TTT
Sbjct: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVAETTT 180

Query: 181 RVSDADGVSDVLSM 195
           R+SDADGVS VL M
Sbjct: 181 RISDADGVS-VLEM 193

[Close]
BLAST of Carg06802 vs. NCBI nr
Match: XP_022955225.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita moschata])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           DIDGTL RYRKYVGQSQFNHPLSRALVWKSEMEDM R+ISSLEARL HFSGEDLEPLTIK
Sbjct: 61  DIDGTLVRYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT
Sbjct: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180

Query: 181 RVSDADGVSDVLSM 195
           RVSDADGVS VL M
Sbjct: 181 RVSDADGVS-VLEM 193

[Close]
BLAST of Carg06802 vs. NCBI nr
Match: XP_023542775.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 9.8e-93
Identity = 185/194 (95.36%), Postives = 189/194 (97.42%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDM RSI+SLEARL HFSGEDLEPLT+K
Sbjct: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMNRSITSLEARLRHFSGEDLEPLTVK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELKRLERQLSVGIERVRSKMRRIISEHT+QLKKKYKGLQEEHSRLQKRLNQLKDVADTT 
Sbjct: 121 ELKRLERQLSVGIERVRSKMRRIISEHTNQLKKKYKGLQEEHSRLQKRLNQLKDVADTTA 180

Query: 181 RVSDADGVSDVLSM 195
           +VSDADGVS VL M
Sbjct: 181 KVSDADGVS-VLEM 193

[Close]
BLAST of Carg06802 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34
Identity = 80/170 (47.06%), Postives = 114/170 (67.06%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRRNG+LKKAYEL+VLCDAEVA++IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DIDGTLARYRKYVGQSQ-FNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTI 120
            I  TL RY+     +Q  N+ LS    W  EM  +K    +L+    H  GEDL PL++
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRL 170
           KEL++LE+QL   + + R +  +++ E   +L++K + L E + +L+ +L
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170

[Close]
BLAST of Carg06802 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-33
Identity = 80/188 (42.55%), Postives = 118/188 (62.77%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRRNG+LKKAYEL+VLCDAEVA++IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DIDGTLARYRKYVGQSQFNHPL---SRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPL 120
            I+ TL +Y      +Q ++          W  EM  +K  +  L+    H  GEDL PL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 TIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVAD 180
           +IKEL++LE+QL   + + R +  +I+ E    L++K + L E + +L+ +L    D ++
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSN 180

Query: 181 TTTRVSDA 186
             + + D+
Sbjct: 181 CRSAIQDS 188

[Close]
BLAST of Carg06802 vs. ExPASy Swiss-Prot
Match: Q39081 (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana OX=3702 GN=CAL PE=1 SV=3)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 76/183 (41.53%), Postives = 122/183 (66.67%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRR G+LKKA E++VLCDAEV++++FS  GK +++SS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-IDGTLARYRKY-VGQSQFNHPLSRALV---WKSEMEDMKRSISSLEARLSHFSGEDLE 120
             ++  L RY +Y   + Q   P S       W  E   +K  I  LE    H+ GE+LE
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 179
           P+++K+L+ LE+QL   ++ +RS+  ++++E  + L++K K +QEE+S L K++ + +++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

[Close]
BLAST of Carg06802 vs. ExPASy Swiss-Prot
Match: Q6Q9I2 (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS15 PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32
Identity = 77/172 (44.77%), Postives = 114/172 (66.28%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKV++KRIEN  +RQV+FSKRRNG+LKKA+E++VLCDAEVA ++FSP GK Y++++ 
Sbjct: 1   MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60

Query: 61  D-IDGTLARYRK--YVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPL 120
             +D  L RY +  Y  ++  +        W  E   +K  I +++    H  GEDLE L
Sbjct: 61  SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESL 120

Query: 121 TIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRL 170
            +KEL++LE+QL   ++ + S+   ++ E  S+L+KK + LQEE+  LQK L
Sbjct: 121 NLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 172

[Close]
BLAST of Carg06802 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32
Identity = 76/169 (44.97%), Postives = 109/169 (64.50%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRRNG+LKKAYEL+VLCDAEVA++IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
               TL RY++     Q N+       W  E+  +K    SL+    H  GEDL PL++K
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRL 170
           EL+ LE+QL   + + R +  +++ E    L++K + L + + +L+ +L
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKL 169

[Close]
BLAST of Carg06802 vs. ExPASy TrEMBL
Match: A0A6J1K1A3 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita maxima OX=3661 GN=LOC111490186 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.3e-94
Identity = 188/194 (96.91%), Postives = 190/194 (97.94%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDM RSISSLEARL HFSGEDLEPLTIK
Sbjct: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMNRSISSLEARLRHFSGEDLEPLTIK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVA+TTT
Sbjct: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVAETTT 180

Query: 181 RVSDADGVSDVLSM 195
           R+SDADGVS VL M
Sbjct: 181 RISDADGVS-VLEM 193

[Close]
BLAST of Carg06802 vs. ExPASy TrEMBL
Match: A0A6J1GUK4 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 GN=LOC111457252 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.6e-94
Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH
Sbjct: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           DIDGTL RYRKYVGQSQFNHPLSRALVWKSEMEDM R+ISSLEARL HFSGEDLEPLTIK
Sbjct: 61  DIDGTLVRYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT
Sbjct: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180

Query: 181 RVSDADGVSDVLSM 195
           RVSDADGVS VL M
Sbjct: 181 RVSDADGVS-VLEM 193

[Close]
BLAST of Carg06802 vs. ExPASy TrEMBL
Match: A0A6J1KKG0 (MADS-box transcription factor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495387 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 152/189 (80.42%), Postives = 174/189 (92.06%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKV++KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDAEVA++IFSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           D+DGTLARYR  VG  Q NHP SRAL+WKSEMEDMKRSI SL+ARL +F+GEDL PL++K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALLWKSEMEDMKRSIISLDARLRNFAGEDLGPLSLK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELK+LERQ+S+GIERVRSK RRI SEH +QLK+KYKGLQEEHSRLQKRLNQLKDVA TT+
Sbjct: 121 ELKQLERQMSIGIERVRSKKRRITSEHVNQLKRKYKGLQEEHSRLQKRLNQLKDVAVTTS 180

Query: 181 RVSDADGVS 190
           R+SDA+  S
Sbjct: 181 RISDANAFS 189

[Close]
BLAST of Carg06802 vs. ExPASy TrEMBL
Match: A0A6J1E6Y4 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 GN=LOC111431347 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.5e-75
Identity = 155/195 (79.49%), Postives = 175/195 (89.74%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKV++KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDAEVA++IFSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           D+DGTLARYR  VG  Q NHP SRALVWKSEMEDMKRSI SL+ARL +F+GEDL  L++K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALVWKSEMEDMKRSIISLDARLRNFAGEDLGLLSLK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTTT 180
           ELK+LERQ+SVGIERVRSK RRI SEH +QLK+KYKGLQEEHSRLQKRLNQLKDV  TT+
Sbjct: 121 ELKQLERQMSVGIERVRSKKRRITSEHINQLKRKYKGLQEEHSRLQKRLNQLKDVGVTTS 180

Query: 181 RVSDADGVSDVLSMA 196
           R+SDA+  S  L MA
Sbjct: 181 RISDANAFS-ALDMA 194

[Close]
BLAST of Carg06802 vs. ExPASy TrEMBL
Match: A0A5A7UJH6 (Transcription factor CAULIFLOWER D-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004780 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 152/190 (80.00%), Postives = 172/190 (90.53%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDA+VA++IFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTIK 120
           D+DGTLARYR  VG  Q NHP SRAL WKSEMEDMKRSISSLEARL HF GEDLEPL++K
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKSEMEDMKRSISSLEARLRHFVGEDLEPLSVK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTT- 180
           ELK+LERQ+SVGIER+RSK RR ++EH + LK+KYKGLQEEHSRLQKRLNQLKDV  TT 
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRFLAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTTS 180

Query: 181 TRVSDADGVS 190
           +R+SDA+  S
Sbjct: 181 SRISDANPTS 190

[Close]
BLAST of Carg06802 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 141.4 bits (355), Expect = 8.4e-34
Identity = 76/183 (41.53%), Postives = 122/183 (66.67%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRR G+LKKA E++VLCDAEV++++FS  GK +++SS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-IDGTLARYRKY-VGQSQFNHPLSRALV---WKSEMEDMKRSISSLEARLSHFSGEDLE 120
             ++  L RY +Y   + Q   P S       W  E   +K  I  LE    H+ GE+LE
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 179
           P+++K+L+ LE+QL   ++ +RS+  ++++E  + L++K K +QEE+S L K++ + +++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

[Close]
BLAST of Carg06802 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 135.2 bits (339), Expect = 6.0e-32
Identity = 74/178 (41.57%), Postives = 119/178 (66.85%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+V++KRIEN  +RQV+FSKRR G+LKKA+E++VLCDAEVA+V+FS  GK +++S+ 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  D-IDGTLARYRKY-VGQSQFNHPLSRALV-WKSEMEDMKRSISSLEARLSHFSGEDLEPL 120
             ++  L RY +Y   + Q   P S     W  E   +K  I  LE    H+ GEDL+ +
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 TIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 176
           + KEL+ LE+QL   ++ +R++  +++ E  ++L+KK K +QE++S L K++ + + +
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKI 178

[Close]
BLAST of Carg06802 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-31
Identity = 74/174 (42.53%), Postives = 111/174 (63.79%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           +GRGK+E+KRIEN T+RQV+F KRRNG+LKKAYEL+VLCDAEVA+VIFS  G+ Y+++++
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  DIDGTLARYRKYVGQSQFNHPL---SRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPL 120
            + GT+ RY+K    +  N P    +    ++ E   ++R I  ++    H  GE L  L
Sbjct: 76  SVRGTIERYKKACSDA-VNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSL 135

Query: 121 TIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQ 172
             KELK LE +L  GI RVRSK   ++      ++K+   LQ ++  L+ ++ +
Sbjct: 136 NFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITE 188

[Close]
BLAST of Carg06802 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-31
Identity = 73/170 (42.94%), Postives = 112/170 (65.88%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           M RGK ++KRIEN TSRQV+FSKRRNG+LKKA+EL+VLCDAEV+++IFSP GK Y+F+S 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  DIDGTLARYRKYVGQSQFNHPLSRALV--WKSEMEDMKRSISSLEARLSHFSGEDLEPLT 120
           ++  T+ RY ++        P+S   +   K E  +M + I  LEA      GE +   +
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCS 120

Query: 121 IKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKR 169
           I+EL+++E+QL   ++ +R++  ++  E   QLK+K K L  E+ +L ++
Sbjct: 121 IEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170

[Close]
BLAST of Carg06802 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31
Identity = 77/190 (40.53%), Postives = 116/190 (61.05%), Query Frame = 0 

Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGK+ +KRI N TSRQV+FSKRRNG+LKKA ELA+LCDAEV V+IFS +G+ Y FSS 
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  DIDGTLARYRKYVGQ-SQFNHPLSRALVWKSEMEDMKRSISSLEARLSHFSGEDLEPLTI 120
            +   + RY    G+ S  N P S    W+ E   +KR + +L+       GE+L  L++
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQL-KDVADT 180
           + L+ LE QL + +  VR K  +++ E    L ++   + +E+  L K++N + +   + 
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 TTRVSDADGV 189
             +VS+ +GV
Sbjct: 181 HEKVSEVEGV 190

The following BLAST results are available for this feature:
BLAST of Carg06802 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7012321.13.1e-107100.00MADS-box transcription factor 6, partial [Cucurbita argyrosperma subsp. argyrosp... [more]
KAG6573136.14.0e-9497.42MADS-box transcription factor 6, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022994475.16.8e-9496.91truncated transcription factor CAULIFLOWER D-like [Cucurbita maxima][more]
XP_022955225.11.2e-9396.91truncated transcription factor CAULIFLOWER D-like [Cucurbita moschata][more]
XP_023542775.19.8e-9395.36truncated transcription factor CAULIFLOWER D-like [Cucurbita pepo subsp. pepo][more]
BLAST of Carg06802 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6EU392.2e-3447.06MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS... [more]
Q7XUN23.1e-3342.55MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
Q390811.2e-3241.53Transcription factor CAULIFLOWER OS=Arabidopsis thaliana OX=3702 GN=CAL PE=1 SV=... [more]
Q6Q9I22.6e-3244.77MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
Q8LLR13.4e-3244.97Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=... [more]
BLAST of Carg06802 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K1A33.3e-9496.91truncated transcription factor CAULIFLOWER D-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1GUK45.6e-9496.91truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1KKG01.1e-7680.42MADS-box transcription factor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495387... [more]
A0A6J1E6Y41.5e-7579.49truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 ... [more]
A0A5A7UJH62.0e-7580.00Transcription factor CAULIFLOWER D-like isoform X2 OS=Cucumis melo var. makuwa O... [more]
BLAST of Carg06802 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G26310.18.4e-3441.53K-box region and MADS-box transcription factor family protein [more]
AT1G69120.16.0e-3241.57K-box region and MADS-box transcription factor family protein [more]
AT2G42830.11.0e-3142.53K-box region and MADS-box transcription factor family protein [more]
AT2G45660.11.0e-3142.94AGAMOUS-like 20 [more]
AT3G57230.11.3e-3140.53AGAMOUS-like 16 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..175
NoneNo IPR availablePANTHERPTHR48019:SF68SUBFAMILY NOT NAMEDcoord: 1..176
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 1..176
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 62.66
coord: 23..38
score: 75.89
coord: 38..59
score: 54.38
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 3.1E-38
score: 143.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 1.4E-25
score: 88.5
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 31.524698
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 13..83
e-value: 2.7E-26
score: 93.2
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 2..88
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 87..169
e-value: 1.6E-19
score: 69.9
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 85..175
score: 13.359221
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 2..77
e-value: 6.40357E-39
score: 126.898

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06802-RACarg06802-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding