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Carg06732 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCTTCGATTAACAGAGCGACTCAGCTGAAGCCATCTCCGCCTCTTCATCTTCATCGTTCAAAGTTCAGCAGCACCTAGCTTGGCTGTTCACTTCTGAATCTTACTTGAGGTACTGTTTCTTTATATTGACGGACGGCGAAAGGATGATCTCGCCGTGATCGATGATTTCCTGGCCTTCGGTATTGTAGCGTTACCATTTGATTTAAGTTTATAGTTTGAGATCTATTTGACGATGGAAGCCACTGAGAAATCCGAAGAAACCGTCTCAAATGTAAGAATTTCTCTCTTGGAACTAACATTTCTTGCTATTTCACAATTTTATCATCTGAAAGGCGTCTCTCGGTTATTGAATTAGGTTTCTCTTTGTAATTATTTCAATTCAAATTCTTTGTTAGATTTAGAATGAATTTTCGTTTGTTTATGATTCACTGGGTCTAGAAATGGCTTTTATGATTTCTCACTTGATCAATGTACTGTATACCTAAAGGTCTCTTCTAATTGTCCATTTAAAGCAGGTTACTAAAAAATTGCCTGGAACTGTGAATTGGGGGACGGCCACAACTATTGCAGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCAGCAGCTTCGGTGGTAAGTTAATTTTCTTGGGGGACAGAAATCCCCAATGTTCTATTGTAATTGTATTTTAGGGCTTGCAGAAATTTTTATGTGTTTTTCTTGCTGCTGGATGCTTGGAGGTTGTGATGAAATGATACGACAGTGAGATAAGATAGTATAAGATCCCTCGTTGATTGGAGAAGGGAATGAAACATTTTTTATAAGGATGTGGAAACATAGAAGGGAACGAAACATTCTTGATAAGAGTGTGGAAACCACTCCATAGCAGACGCATTTTAAAATCCTTGAGGGAAAGCTTGGAAGGAAAAGCCCAAAGAGGATAATATCTGCTAGCGGTGAACTTGGGCTGTTACAAATGATATCAAAGCCAAACACCAAGCGATGTGCTAGCAAGGACGCTGGCCCCAAAGGGGGTGGATTGTGAGATCCCACATCAATTGGAGAGAGGAACGAGAGCCAACGAGATGTTGGGCTCCGAAGGGGGTGGACTATGAGATCCCACATCAATTGGAGTGAGGAACAAGTGTCAGCGAGGACGCTAGGCCCCAAAAGTAGTGGATTGTGAGATCTCACATTGGTTGGAGAGAGGAACAAAACATTTAAGGGTGTGGAAACCTCTTCCTAGCAGACACGTTTTAAAAACTTTGAGGGTAAGCCCAGAAGGGAAAACCCAAAGAAGCACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACATATACTCTCAACCAAGAAGTCAGAGATTTGAATTCTGCTTTGTCCTCGTGTTGTCATTCTACTGTCTTTTTCTGTTTACTTCTAAATCCAAGGCTGTACAATAAAGAGGGAATGGAAAAAGAGGGGGGGATGCAGAAATGCCATTTTCTCCTCATATATATTCAGTATCCTTTGCAATTTTCCTTTCTGAAATGACTCATATATTCAAATCAAAATTTTCAAACTGGATGAAATTTAAGAGGGAAGTATGACAATTAACAGAGCAAGGATGCAGAAGTAACATTGAAGCTTGGGAGCACACCTGATAAGCGAGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCAGAGTAACACGAGGCTCAATAGTTGGTGGTGTGCGTCTCGGGATGTTTACAGCTGCATTTTACGGTCTACAAAATCTGCTAGCCGAGAAGCGTGGCGTGCATGATGTTTTCAATGTCGCTGCTGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATGTAAGCAGCAGCAGCTATTCCTTGGGTCCAATTCCATCGAGTTATGCCTTGTCCTAGTTTTATCAATTCTTACTTCAAAGCTTGGAGCATCTTAAATGTTTGAAGATATGAACAGAGCTGTTTAAATTACTTAAACAATGCATGTTTTCCTGAGCTTATTTTGCTATATGGCTTACTTTGCAGTGCCGGGATCGCTCAAGTGGCGCGCTAGGAACGTAGCGATGGGAGCTGTTCTTGGTGCAGCATTTTGCTTCCCTCTTGGTAATAGTTATATGTTGAATGTGGTGTTTTATTGCTTGGTTATAGGAATCCTTTTCCACGTGAAAATTCCCTGAATTCTTGAACTTTTTGAGTATAATAAAAGAAACCAAAAGTGGTGGGTGAGCTTGTTAGAAAGCGTTGGTGGCTGTTGCTAAAGAGACATTTTGATCACAGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGCAATGAAGCACTGGCTTATCCTAGTGCAATTCAAAAGGGAGAATCAAAGAGTGGCGTCGGTGCTGCTATTGAGAGATTAGAAGAAAGCTTGAACAAATAGATTCAATGACATCTCCCAAGCTTCTTTCTACCATATTTGCTGGATTTTGTGGTGGTTTTGACGACAATAAACTGCCCATTCTTGGGGACTAACAAGTTAGGGGAAGAAAATATGTTTCTACTCAATTGTTTCATCTTGTTTCTTTAGTAATTAGCCTACTCATTCACCTTTTAGAGGGCATTGCTCGAATGGTCGAACGGTCGAAACCCCCGGAGCTCTATACGTTCGAAGATTTGTCTTATGAACCAATTGTTGGTTGATTCTATCTTCCAACATTTCCTATTCAATTTTGTTTAAACATTGAGTTGATCCTTCAAGTATATTGATGTGGGAGATGAAACCAAATGGATTGGAATATTGAGT AGCTTCGATTAACAGAGCGACTCAGCTGAAGCCATCTCCGCCTCTTCATCTTCATCGTTCAAAGTTCAGCAGCACCTAGCTTGGCTGTTCACTTCTGAATCTTACTTGAGGTACTGTTTCTTTATATTGACGGACGGCGAAAGGATGATCTCGCCGTGATCGATGATTTCCTGGCCTTCGGTATTGTAGCGTTACCATTTGATTTAAGTTTATAGTTTGAGATCTATTTGACGATGGAAGCCACTGAGAAATCCGAAGAAACCGTCTCAAATGTTACTAAAAAATTGCCTGGAACTGTGAATTGGGGGACGGCCACAACTATTGCAGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCAGCAGCTTCGGTGAGCAAGGATGCAGAAGTAACATTGAAGCTTGGGAGCACACCTGATAAGCGAGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCAGAGTAACACGAGGCTCAATAGTTGGTGGTGTGCGTCTCGGGATGTTTACAGCTGCATTTTACGGTCTACAAAATCTGCTAGCCGAGAAGCGTGGCGTGCATGATGTTTTCAATGTCGCTGCTGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCGGGATCGCTCAAGTGGCGCGCTAGGAACGTAGCGATGGGAGCTGTTCTTGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGCAATGAAGCACTGGCTTATCCTAGTGCAATTCAAAAGGGAGAATCAAAGAGTGGCGTCGGTGCTGCTATTGAGAGATTAGAAGAAAGCTTGAACAAATAGATTCAATGACATCTCCCAAGCTTCTTTCTACCATATTTGCTGGATTTTGTGGTGGTTTTGACGACAATAAACTGCCCATTCTTGGGGACTAACAAGTTAGGGGAAGAAAATATGTTTCTACTCAATTGTTTCATCTTGTTTCTTTAGTAATTAGCCTACTCATTCACCTTTTAGAGGGCATTGCTCGAATGGTCGAACGGTCGAAACCCCCGGAGCTCTATACGTTCGAAGATTTGTCTTATGAACCAATTGTTGGTTGATTCTATCTTCCAACATTTCCTATTCAATTTTGTTTAAACATTGAGTTGATCCTTCAAGTATATTGATGTGGGAGATGAAACCAAATGGATTGGAATATTGAGT ATGGAAGCCACTGAGAAATCCGAAGAAACCGTCTCAAATGTTACTAAAAAATTGCCTGGAACTGTGAATTGGGGGACGGCCACAACTATTGCAGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCAGCAGCTTCGGTGAGCAAGGATGCAGAAGTAACATTGAAGCTTGGGAGCACACCTGATAAGCGAGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCAGAGTAACACGAGGCTCAATAGTTGGTGGTGTGCGTCTCGGGATGTTTACAGCTGCATTTTACGGTCTACAAAATCTGCTAGCCGAGAAGCGTGGCGTGCATGATGTTTTCAATGTCGCTGCTGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCGGGATCGCTCAAGTGGCGCGCTAGGAACGTAGCGATGGGAGCTGTTCTTGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGCAATGAAGCACTGGCTTATCCTAGTGCAATTCAAAAGGGAGAATCAAAGAGTGGCGTCGGTGCTGCTATTGAGAGATTAGAAGAAAGCTTGAACAAATAG MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGSTPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVAAAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYPSAIQKGESKSGVGAAIERLEESLNK Homology
BLAST of Carg06732 vs. NCBI nr
Match: XP_022954601.1 (uncharacterized protein LOC111456818 [Cucurbita moschata] >KAG7012252.1 hypothetical protein SDJN02_25004 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Carg06732 vs. NCBI nr
Match: XP_022994666.1 (uncharacterized protein LOC111490310 [Cucurbita maxima]) HSP 1 Score: 391.7 bits (1005), Expect = 3.8e-105 Identity = 202/205 (98.54%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Carg06732 vs. NCBI nr
Match: KAG6573065.1 (hypothetical protein SDJN03_26952, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 391.7 bits (1005), Expect = 3.8e-105 Identity = 203/205 (99.02%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg06732 vs. NCBI nr
Match: XP_023542872.1 (uncharacterized protein LOC111802663 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104 Identity = 202/205 (98.54%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg06732 vs. NCBI nr
Match: XP_038893751.1 (uncharacterized protein LOC120082584 [Benincasa hispida]) HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99 Identity = 190/205 (92.68%), Postives = 195/205 (95.12%), Query Frame = 0
BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A6J1GRB7 (uncharacterized protein LOC111456818 OS=Cucurbita moschata OX=3662 GN=LOC111456818 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A6J1JZT3 (uncharacterized protein LOC111490310 OS=Cucurbita maxima OX=3661 GN=LOC111490310 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105 Identity = 202/205 (98.54%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A6J1C6Y4 (uncharacterized protein LOC111008556 OS=Momordica charantia OX=3673 GN=LOC111008556 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.4e-99 Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A5A7UKY0 (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003720 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 8.3e-98 Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0
BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A0A0LR90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046150 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 8.3e-98 Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0
BLAST of Carg06732 vs. TAIR 10
Match: AT5G63000.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein ) HSP 1 Score: 281.6 bits (719), Expect = 5.2e-76 Identity = 144/205 (70.24%), Postives = 165/205 (80.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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