Carg06732 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06732
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
Location	Carg_Chr18: 908280 .. 911058 (-)
RNA-Seq Expression	Carg06732
Synteny	Carg06732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTCGATTAACAGAGCGACTCAGCTGAAGCCATCTCCGCCTCTTCATCTTCATCGTTCAAAGTTCAGCAGCACCTAGCTTGGCTGTTCACTTCTGAATCTTACTTGAGGTACTGTTTCTTTATATTGACGGACGGCGAAAGGATGATCTCGCCGTGATCGATGATTTCCTGGCCTTCGGTATTGTAGCGTTACCATTTGATTTAAGTTTATAGTTTGAGATCTATTTGACGATGGAAGCCACTGAGAAATCCGAAGAAACCGTCTCAAATGTAAGAATTTCTCTCTTGGAACTAACATTTCTTGCTATTTCACAATTTTATCATCTGAAAGGCGTCTCTCGGTTATTGAATTAGGTTTCTCTTTGTAATTATTTCAATTCAAATTCTTTGTTAGATTTAGAATGAATTTTCGTTTGTTTATGATTCACTGGGTCTAGAAATGGCTTTTATGATTTCTCACTTGATCAATGTACTGTATACCTAAAGGTCTCTTCTAATTGTCCATTTAAAGCAGGTTACTAAAAAATTGCCTGGAACTGTGAATTGGGGGACGGCCACAACTATTGCAGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCAGCAGCTTCGGTGGTAAGTTAATTTTCTTGGGGGACAGAAATCCCCAATGTTCTATTGTAATTGTATTTTAGGGCTTGCAGAAATTTTTATGTGTTTTTCTTGCTGCTGGATGCTTGGAGGTTGTGATGAAATGATACGACAGTGAGATAAGATAGTATAAGATCCCTCGTTGATTGGAGAAGGGAATGAAACATTTTTTATAAGGATGTGGAAACATAGAAGGGAACGAAACATTCTTGATAAGAGTGTGGAAACCACTCCATAGCAGACGCATTTTAAAATCCTTGAGGGAAAGCTTGGAAGGAAAAGCCCAAAGAGGATAATATCTGCTAGCGGTGAACTTGGGCTGTTACAAATGATATCAAAGCCAAACACCAAGCGATGTGCTAGCAAGGACGCTGGCCCCAAAGGGGGTGGATTGTGAGATCCCACATCAATTGGAGAGAGGAACGAGAGCCAACGAGATGTTGGGCTCCGAAGGGGGTGGACTATGAGATCCCACATCAATTGGAGTGAGGAACAAGTGTCAGCGAGGACGCTAGGCCCCAAAAGTAGTGGATTGTGAGATCTCACATTGGTTGGAGAGAGGAACAAAACATTTAAGGGTGTGGAAACCTCTTCCTAGCAGACACGTTTTAAAAACTTTGAGGGTAAGCCCAGAAGGGAAAACCCAAAGAAGCACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACATATACTCTCAACCAAGAAGTCAGAGATTTGAATTCTGCTTTGTCCTCGTGTTGTCATTCTACTGTCTTTTTCTGTTTACTTCTAAATCCAAGGCTGTACAATAAAGAGGGAATGGAAAAAGAGGGGGGGATGCAGAAATGCCATTTTCTCCTCATATATATTCAGTATCCTTTGCAATTTTCCTTTCTGAAATGACTCATATATTCAAATCAAAATTTTCAAACTGGATGAAATTTAAGAGGGAAGTATGACAATTAACAGAGCAAGGATGCAGAAGTAACATTGAAGCTTGGGAGCACACCTGATAAGCGAGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCAGAGTAACACGAGGCTCAATAGTTGGTGGTGTGCGTCTCGGGATGTTTACAGCTGCATTTTACGGTCTACAAAATCTGCTAGCCGAGAAGCGTGGCGTGCATGATGTTTTCAATGTCGCTGCTGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATGTAAGCAGCAGCAGCTATTCCTTGGGTCCAATTCCATCGAGTTATGCCTTGTCCTAGTTTTATCAATTCTTACTTCAAAGCTTGGAGCATCTTAAATGTTTGAAGATATGAACAGAGCTGTTTAAATTACTTAAACAATGCATGTTTTCCTGAGCTTATTTTGCTATATGGCTTACTTTGCAGTGCCGGGATCGCTCAAGTGGCGCGCTAGGAACGTAGCGATGGGAGCTGTTCTTGGTGCAGCATTTTGCTTCCCTCTTGGTAATAGTTATATGTTGAATGTGGTGTTTTATTGCTTGGTTATAGGAATCCTTTTCCACGTGAAAATTCCCTGAATTCTTGAACTTTTTGAGTATAATAAAAGAAACCAAAAGTGGTGGGTGAGCTTGTTAGAAAGCGTTGGTGGCTGTTGCTAAAGAGACATTTTGATCACAGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGCAATGAAGCACTGGCTTATCCTAGTGCAATTCAAAAGGGAGAATCAAAGAGTGGCGTCGGTGCTGCTATTGAGAGATTAGAAGAAAGCTTGAACAAATAGATTCAATGACATCTCCCAAGCTTCTTTCTACCATATTTGCTGGATTTTGTGGTGGTTTTGACGACAATAAACTGCCCATTCTTGGGGACTAACAAGTTAGGGGAAGAAAATATGTTTCTACTCAATTGTTTCATCTTGTTTCTTTAGTAATTAGCCTACTCATTCACCTTTTAGAGGGCATTGCTCGAATGGTCGAACGGTCGAAACCCCCGGAGCTCTATACGTTCGAAGATTTGTCTTATGAACCAATTGTTGGTTGATTCTATCTTCCAACATTTCCTATTCAATTTTGTTTAAACATTGAGTTGATCCTTCAAGTATATTGATGTGGGAGATGAAACCAAATGGATTGGAATATTGAGT

mRNA sequence

AGCTTCGATTAACAGAGCGACTCAGCTGAAGCCATCTCCGCCTCTTCATCTTCATCGTTCAAAGTTCAGCAGCACCTAGCTTGGCTGTTCACTTCTGAATCTTACTTGAGGTACTGTTTCTTTATATTGACGGACGGCGAAAGGATGATCTCGCCGTGATCGATGATTTCCTGGCCTTCGGTATTGTAGCGTTACCATTTGATTTAAGTTTATAGTTTGAGATCTATTTGACGATGGAAGCCACTGAGAAATCCGAAGAAACCGTCTCAAATGTTACTAAAAAATTGCCTGGAACTGTGAATTGGGGGACGGCCACAACTATTGCAGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCAGCAGCTTCGGTGAGCAAGGATGCAGAAGTAACATTGAAGCTTGGGAGCACACCTGATAAGCGAGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCAGAGTAACACGAGGCTCAATAGTTGGTGGTGTGCGTCTCGGGATGTTTACAGCTGCATTTTACGGTCTACAAAATCTGCTAGCCGAGAAGCGTGGCGTGCATGATGTTTTCAATGTCGCTGCTGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCGGGATCGCTCAAGTGGCGCGCTAGGAACGTAGCGATGGGAGCTGTTCTTGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGCAATGAAGCACTGGCTTATCCTAGTGCAATTCAAAAGGGAGAATCAAAGAGTGGCGTCGGTGCTGCTATTGAGAGATTAGAAGAAAGCTTGAACAAATAGATTCAATGACATCTCCCAAGCTTCTTTCTACCATATTTGCTGGATTTTGTGGTGGTTTTGACGACAATAAACTGCCCATTCTTGGGGACTAACAAGTTAGGGGAAGAAAATATGTTTCTACTCAATTGTTTCATCTTGTTTCTTTAGTAATTAGCCTACTCATTCACCTTTTAGAGGGCATTGCTCGAATGGTCGAACGGTCGAAACCCCCGGAGCTCTATACGTTCGAAGATTTGTCTTATGAACCAATTGTTGGTTGATTCTATCTTCCAACATTTCCTATTCAATTTTGTTTAAACATTGAGTTGATCCTTCAAGTATATTGATGTGGGAGATGAAACCAAATGGATTGGAATATTGAGT

Coding sequence (CDS)

ATGGAAGCCACTGAGAAATCCGAAGAAACCGTCTCAAATGTTACTAAAAAATTGCCTGGAACTGTGAATTGGGGGACGGCCACAACTATTGCAGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCAGCAGCTTCGGTGAGCAAGGATGCAGAAGTAACATTGAAGCTTGGGAGCACACCTGATAAGCGAGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCAGAGTAACACGAGGCTCAATAGTTGGTGGTGTGCGTCTCGGGATGTTTACAGCTGCATTTTACGGTCTACAAAATCTGCTAGCCGAGAAGCGTGGCGTGCATGATGTTTTCAATGTCGCTGCTGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCGGGATCGCTCAAGTGGCGCGCTAGGAACGTAGCGATGGGAGCTGTTCTTGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGCAATGAAGCACTGGCTTATCCTAGTGCAATTCAAAAGGGAGAATCAAAGAGTGGCGTCGGTGCTGCTATTGAGAGATTAGAAGAAAGCTTGAACAAATAG

Protein sequence

MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGSTPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVAAAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYPSAIQKGESKSGVGAAIERLEESLNK

Homology

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BLAST of Carg06732 vs. NCBI nr
Match: XP_022954601.1 (uncharacterized protein LOC111456818 [Cucurbita moschata] >KAG7012252.1 hypothetical protein SDJN02_25004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           SAIQKGESKSGVGAAIERLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

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BLAST of Carg06732 vs. NCBI nr
Match: XP_022994666.1 (uncharacterized protein LOC111490310 [Cucurbita maxima])

HSP 1 Score: 391.7 bits (1005), Expect = 3.8e-105
Identity = 202/205 (98.54%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARN+AMG+VLGAAFCFPLGWLHLKLVEKANEGNEALAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNLAMGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           SAIQKGESKSGVGAAI+RLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIQRLEESLNK 205

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BLAST of Carg06732 vs. NCBI nr
Match: KAG6573065.1 (hypothetical protein SDJN03_26952, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.7 bits (1005), Expect = 3.8e-105
Identity = 203/205 (99.02%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEATEKSEETVSNV KKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVAKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEK NEGNEALAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKVNEGNEALAYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           SAIQKGESKSGVGAAIERLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

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BLAST of Carg06732 vs. NCBI nr
Match: XP_023542872.1 (uncharacterized protein LOC111802663 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104
Identity = 202/205 (98.54%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEATEKSEETVSNVTKKL GTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLTGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEG+EALAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGSEALAYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           S IQKGESKSGVGAAIERLEESLNK
Sbjct: 181 STIQKGESKSGVGAAIERLEESLNK 205

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BLAST of Carg06732 vs. NCBI nr
Match: XP_038893751.1 (uncharacterized protein LOC120082584 [Benincasa hispida])

HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99
Identity = 190/205 (92.68%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME  EKSEET S  TKKLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKR VHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRAVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARNVA+G+VLGAAFCFPLGWLHLKLVEKANEGNEAL YP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALGYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           + +QKGESKSGVGAAIER EE+LNK
Sbjct: 181 NKVQKGESKSGVGAAIERFEENLNK 205

[Close]

BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A6J1GRB7 (uncharacterized protein LOC111456818 OS=Cucurbita moschata OX=3662 GN=LOC111456818 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           SAIQKGESKSGVGAAIERLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

[Close]

BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A6J1JZT3 (uncharacterized protein LOC111490310 OS=Cucurbita maxima OX=3661 GN=LOC111490310 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105
Identity = 202/205 (98.54%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARN+AMG+VLGAAFCFPLGWLHLKLVEKANEGNEALAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNLAMGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           SAIQKGESKSGVGAAI+RLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIQRLEESLNK 205

[Close]

BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A6J1C6Y4 (uncharacterized protein LOC111008556 OS=Momordica charantia OX=3673 GN=LOC111008556 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.4e-99
Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA EKSEET S+ T KLPG VNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEAAEKSEETASSGTNKLPGMVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFG+ILPGSLKWRARNVA+G+VLGAAFCFPLGWLHLKLVEKANEGN+ALAYP
Sbjct: 121 AAGSATAATFGVILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNQALAYP 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           + +QKGESKSGVGAAIERL ESLNK
Sbjct: 181 NTVQKGESKSGVGAAIERLGESLNK 205

[Close]

BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A5A7UKY0 (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003720 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.3e-98
Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME  E+SEET S  TKKLPGTVNWGTATTIAVFAGM YGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIAVFAGMLYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARNVAMG+VLGAAFCFPLGW+HLKLVEKANEGNEAL Y 
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           + +QKG+SKSGVGAAIER EE++NK
Sbjct: 181 NTVQKGKSKSGVGAAIERFEENMNK 205

[Close]

BLAST of Carg06732 vs. ExPASy TrEMBL
Match: A0A0A0LR90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046150 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.3e-98
Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME  E+SEET S  TKKLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
           AAGSATAATFGLILPGSLKWRARNVAMG+VLGAAFCFPLGW+HLKLVEKANEGNEAL Y 
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
           + +Q+G+SKSGVGAAIER EE+LNK
Sbjct: 181 NTVQEGKSKSGVGAAIERFEENLNK 205

[Close]

BLAST of Carg06732 vs. TAIR 10
Match: AT5G63000.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 281.6 bits (719), Expect = 5.2e-76
Identity = 144/205 (70.24%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA EK EET+   + +L G  NWGTAT + VFAG+ YGGSKEA+ASVSKDAEV LK+GS
Sbjct: 1   MEAVEKPEETIPGNSSRLAGNPNWGTATVVGVFAGLLYGGSKEASASVSKDAEVMLKMGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120
           T DKREQ+RL+RDAMEKRFIRVTRGS++GG+RLGMFTA+F+ LQN LAE RGVHDVFNV 
Sbjct: 61  TQDKREQHRLMRDAMEKRFIRVTRGSLIGGMRLGMFTASFFSLQNFLAETRGVHDVFNVV 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180
            AGSATAA FGLI+PGSL WRARNV +G+VLGA  CFPLGW+ LKL++KANEGN      
Sbjct: 121 GAGSATAAVFGLIMPGSLAWRARNVLLGSVLGATVCFPLGWVQLKLMKKANEGNNV---- 180

Query: 181 SAIQKGESKSGVGAAIERLEESLNK 206
                GE  SGVGAAIERLE+ L K
Sbjct: 181 DTGHHGEVTSGVGAAIERLEQQLRK 201

The following BLAST results are available for this feature:

BLAST of Carg06732 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954601.1	3.4e-106	100.00	uncharacterized protein LOC111456818 [Cucurbita moschata] >KAG7012252.1 hypothet...	[more]
XP_022994666.1	3.8e-105	98.54	uncharacterized protein LOC111490310 [Cucurbita maxima]	[more]
KAG6573065.1	3.8e-105	99.02	hypothetical protein SDJN03_26952, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023542872.1	3.2e-104	98.54	uncharacterized protein LOC111802663 [Cucurbita pepo subsp. pepo]	[more]
XP_038893751.1	4.1e-99	92.68	uncharacterized protein LOC120082584 [Benincasa hispida]	[more]

BLAST of Carg06732 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg06732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRB7	1.7e-106	100.00	uncharacterized protein LOC111456818 OS=Cucurbita moschata OX=3662 GN=LOC1114568...	[more]
A0A6J1JZT3	1.8e-105	98.54	uncharacterized protein LOC111490310 OS=Cucurbita maxima OX=3661 GN=LOC111490310...	[more]
A0A6J1C6Y4	3.4e-99	92.68	uncharacterized protein LOC111008556 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A5A7UKY0	8.3e-98	91.22	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal p...	[more]
A0A0A0LR90	8.3e-98	91.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046150 PE=4 SV=1	[more]

BLAST of Carg06732 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63000.1	5.2e-76	70.24	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 26..155 e-value: 5.8E-8 score: 33.1
None	No IPR available	PANTHER	PTHR13002	C3ORF1 PROTEIN-RELATED	coord: 18..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06732-RA	Carg06732-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion