Carg06652 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06652
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LysM domain-containing protein
Location	Carg_Chr18: 462693 .. 465940 (+)
RNA-Seq Expression	Carg06652
Synteny	Carg06652

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTGATCTTTAAATTTTCTTCATCGGAGCAAACGGCGCCTTTTGAGTGGTAGGTGTTGGTAGGTGAAGATTTCTTCCGATCGTAAGATCAGATCCTTCCTCCCAAATTCGATTGAAGACGAATTCGAAGAAGAAGTTCGTGTAGATGTCCCCGTCAAATAGTTCGTCAAGTGGAGTTAGTGGACATGGTGGACCGAATTACATAGAACATCAAATTTCCAAAATGGATACTCTCGCCGGCATCGCCATTAAGTATGGAGTCGAGGTACCTTTCATTTTCCTTTTCCTTCTTCAATTTTTGCCTATTCTTCTGTCGGTTTAGCTTTATGTTCTCCTTTGTTGTGTTTTTTCCTCAAGTTTTGGCGATTCTTTCTCTTGTCATACCGTATCAATTAACGGTTGACTTGATTCGATTTTCGAGGTCTGGTAAATCATTGCTCTAAGTTCCTTTGTATCGCTGAAAGTATTTCAAAATCTTTGAATTTAGATTCTGATTCAACGGTGATTTCAGCACTCTCTTATTGCAGAAATCTTCATCAATTATCGAAAACTATTCCGATTTAGGCATATGTATATTGTGAAAACAATAGTTCATTTGCGAGGATTCAATTGAATCAGTGTGTTTAACTTCGTTTGGAAACACAGTAAGGCTAACGTTAGGGCGAAATATTCGCGAGTTTCGGTATTTCCAATTCCATGAGCATTGTTTCTCTACTCGACGTAATTTAACAATGATCTGATGCTCCAAATAGATTTCTTCAGCTCTGAACTTTGTCGGTTCAGAGGTGACTTCGATCGGTTGCATTTGGCTCTTTCAGTTGATCAAGCCAAACAATAGAAAGTTCGTATTAGATTTCATTTGCTCAAATTCTTGTTAATTAAGATACCAGGGTGTCAGGATGAATAAATAGATTCGTTTTTCTTTTTCAAATTCCATCTTGCTTGCTGAATTTGCAATCATATTCTTTGAAATTGGTAATGTGTCTTTACTCTTTAGTATATAAAATTCCAGTGATGTTATTAGCAAGCTTATGCCTACTGAGAAGTTTGTGTGACCAATCAATATCCATAGTGTTGATCTTAGGCTCATCAATCTATCTGGGATCTTAGGTTATTAGCAACCTCATCAATCCATAAGTGTATATTATTTATAGCTCATTCAATTGTTACGATAGTAAAGCTGAAAATGGTCATACACCGTGAACGACTATTTACAAAAAGAAAAAAAAAAAAAAAATTGGTAGAGATGTATATGGTAGATAGTTATATATAGTAGGTGGTTATATGTGATAAACGTATGTGTGTGTATATATATATATTGTAAACTGAGACCGTGCTTTCAAAACTTATTTATGCATTCTTTGTTTTCTTCCTACTAAATTCTACTACCGTACATTCTTGAAGTTATCAATATAAACCTTTAATCAATATTTTTCTCCTGTATTTTCTCTCTTCTATTCTTTGTGTTCATCTAGATTGAGTGTGTACATTGTTGTGTGATCCTAATTGTTTTTCCCATCGTGATGCTCTTAATTTCATTTCTCACTAGGTGGCTGACATCAGGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAATTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCCAGCTTGTCTGATGCTTCTACTGTTACAGGGTATTCCTTGCTGTGAATTTCTAGATGAGTTTATATCTTTCTATTATTAAGCTTTCTGTTTGCCTATATTTTCTGATCATACTTCATGTGTGGAAACGTGATTTAGTCGAGTCGATTGGTGGCTCTTAAAGTAAATTTAGCGTATGCACATTGAGGCTTTGGTTAGGGGTGGGAAATGGGAATCTTAAGAATCTTATTGTAACATACTTTAAAAACCAAGGAATTGCTCATGTGGTTAGCTAGTTTCAAGTTGTAGACATGTTTTATAGGATCATGGCGCTGTCTAACAACTTACGTCGTAGTGAACACGTTTATTATTTTTAAATTTGAATATTGTGAAGGCAAAGGTGGTTATAAATTATAACATTTGCACGAAATACATTACATGCCTAGAGAACGTAATATCAGTTTGAAGTATGCATTTCAACGTTTTCTTATTCTAATGATTGAAATTTGCATCATAAACATCTTATGCAGCATGCTATCTTGAGAATTGGTATAATTTCCAATTTCTTGGAGTTTCCAACAGACTTCCTTCCTTGATTTTGTTTGAAAAGTATCGTCCCGAAGTAGTAATATAGTTGAATATATGTCGAAAGTTTTGAAATTGTTCAACTTTGTACAGATATTATAATTTTAAAGATTTGATTCAGATGGTATAATCTGTTCTCCTTGGCTGTGGATTGGACAATATCCAGAAAATTTACTGTTCAGGTTTGTCTAATATAGATTTTGCTAAATGTATTGCAGAAGTGGATCTGTAAATGAAGAACCTCTACATCTAGGCCAACCAACTGATATGCTAAACTCTTTGCAATCTTCGAGATTGAAATCACCGAACCCGAATGCCTCCCCTGCCATGAGCACATTACAAAAGTATTATGGTCTAGTATCACGAACAGTCGAGAGTGCACCCGAAGGTATGGAGATGGCATTATACAGAACTGAGAATTCAAATTTCATTGATGATGGGTTGTTTCCCAAAACCTCTGAGCTTTCTACACCACCATCAAACATTCACTCGAAGACCAGGAAATACGCCGGTAGTTTCTGGCCTGAGAACGACTCAATAACCGAACATCTATTATGTACAGAACCTGGAGATGGAGAGAATGAAAAATCTGATGAGAAGCTAGTTCGCAGGCGTCAAAAGGCTGAAAATGGCGTTGGCACCCAAGAGAGATCGTCGAAGGGCGAAAACAGTGGCGGAAGCTTCTTTTCTGGTTCAAATGGGAAGAGTTTAGCCATGAGGCTAAAATCAGTTAGCAGATCAATGTTGCTATCGGATTCGGATCCCGTTCGGATAAACTCGATTCCAGTAGGATTAGGAGATGCTATAATCACTGATGGAATTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAGCAGCAGCAGCAGCAGCAGCAGTTCAGCATCTGTGTGGGCAACAACAAGGTGGAGTTTAAAGCCGGACTTGCAAGCTCTCTCAAGTGCTTCAATCACAAAGCCACTCTTCGATGGTTTGCCAAATCCAATCACAGGGCGCAGGAACAAAGCAGCTCTTGATTAA

mRNA sequence

TAATTGATCTTTAAATTTTCTTCATCGGAGCAAACGGCGCCTTTTGAGTGGTAGGTGTTGGTAGGTGAAGATTTCTTCCGATCGTAAGATCAGATCCTTCCTCCCAAATTCGATTGAAGACGAATTCGAAGAAGAAGTTCGTGTAGATGTCCCCGTCAAATAGTTCGTCAAGTGGAGTTAGTGGACATGGTGGACCGAATTACATAGAACATCAAATTTCCAAAATGGATACTCTCGCCGGCATCGCCATTAAGTATGGAGTCGAGGTGGCTGACATCAGGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAATTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCCAGCTTGTCTGATGCTTCTACTGTTACAGGAAGTGGATCTGTAAATGAAGAACCTCTACATCTAGGCCAACCAACTGATATGCTAAACTCTTTGCAATCTTCGAGATTGAAATCACCGAACCCGAATGCCTCCCCTGCCATGAGCACATTACAAAAGTATTATGGTCTAGTATCACGAACAGTCGAGAGTGCACCCGAAGGTATGGAGATGGCATTATACAGAACTGAGAATTCAAATTTCATTGATGATGGGTTGTTTCCCAAAACCTCTGAGCTTTCTACACCACCATCAAACATTCACTCGAAGACCAGGAAATACGCCGGTAGTTTCTGGCCTGAGAACGACTCAATAACCGAACATCTATTATGTACAGAACCTGGAGATGGAGAGAATGAAAAATCTGATGAGAAGCTAGTTCGCAGGCGTCAAAAGGCTGAAAATGGCGTTGGCACCCAAGAGAGATCGTCGAAGGGCGAAAACAGTGGCGGAAGCTTCTTTTCTGGTTCAAATGGGAAGAGTTTAGCCATGAGGCTAAAATCAGTTAGCAGATCAATGTTGCTATCGGATTCGGATCCCGTTCGGATAAACTCGATTCCAGTAGGATTAGGAGATGCTATAATCACTGATGGAATTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAGCAGCAGCAGCAGCAGCAGCAGTTCAGCATCTGTGTGGGCAACAACAAGGTGGAGTTTAAAGCCGGACTTGCAAGCTCTCTCAAGTGCTTCAATCACAAAGCCACTCTTCGATGGTTTGCCAAATCCAATCACAGGGCGCAGGAACAAAGCAGCTCTTGATTAA

Coding sequence (CDS)

ATGTCCCCGTCAAATAGTTCGTCAAGTGGAGTTAGTGGACATGGTGGACCGAATTACATAGAACATCAAATTTCCAAAATGGATACTCTCGCCGGCATCGCCATTAAGTATGGAGTCGAGGTGGCTGACATCAGGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAATTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCCAGCTTGTCTGATGCTTCTACTGTTACAGGAAGTGGATCTGTAAATGAAGAACCTCTACATCTAGGCCAACCAACTGATATGCTAAACTCTTTGCAATCTTCGAGATTGAAATCACCGAACCCGAATGCCTCCCCTGCCATGAGCACATTACAAAAGTATTATGGTCTAGTATCACGAACAGTCGAGAGTGCACCCGAAGGTATGGAGATGGCATTATACAGAACTGAGAATTCAAATTTCATTGATGATGGGTTGTTTCCCAAAACCTCTGAGCTTTCTACACCACCATCAAACATTCACTCGAAGACCAGGAAATACGCCGGTAGTTTCTGGCCTGAGAACGACTCAATAACCGAACATCTATTATGTACAGAACCTGGAGATGGAGAGAATGAAAAATCTGATGAGAAGCTAGTTCGCAGGCGTCAAAAGGCTGAAAATGGCGTTGGCACCCAAGAGAGATCGTCGAAGGGCGAAAACAGTGGCGGAAGCTTCTTTTCTGGTTCAAATGGGAAGAGTTTAGCCATGAGGCTAAAATCAGTTAGCAGATCAATGTTGCTATCGGATTCGGATCCCGTTCGGATAAACTCGATTCCAGTAGGATTAGGAGATGCTATAATCACTGATGGAATTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAGCAGCAGCAGCAGCAGCAGCAGTTCAGCATCTGTGTGGGCAACAACAAGGTGGAGTTTAAAGCCGGACTTGCAAGCTCTCTCAAGTGCTTCAATCACAAAGCCACTCTTCGATGGTTTGCCAAATCCAATCACAGGGCGCAGGAACAAAGCAGCTCTTGATTAA

Protein sequence

MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPAMSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKYAGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD

Homology

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BLAST of Carg06652 vs. NCBI nr
Match: KAG7012173.1 (hypothetical protein SDJN02_24925 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 678.3 bits (1749), Expect = 3.5e-191
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF
Sbjct: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300

Query: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 355

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BLAST of Carg06652 vs. NCBI nr
Match: KAG6572989.1 (LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 664.5 bits (1713), Expect = 5.3e-187
Identity = 349/355 (98.31%), Postives = 350/355 (98.59%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNF+DDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFVDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGT ERSSKGENSGGSFF
Sbjct: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTPERSSKGENSGGSFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300

Query: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           D  SS SSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 D--SSGSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 353

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BLAST of Carg06652 vs. NCBI nr
Match: XP_023542393.1 (uncharacterized protein LOC111802312 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 661.8 bits (1706), Expect = 3.4e-186
Identity = 348/355 (98.03%), Postives = 349/355 (98.31%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE APEGMEMALY+TENSNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVEKAPEGMEMALYKTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVG  ERSSKGENSGGSFF
Sbjct: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGISERSSKGENSGGSFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300

Query: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           D  SSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 D--SSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 353

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BLAST of Carg06652 vs. NCBI nr
Match: XP_022994944.1 (uncharacterized protein LOC111490532 [Cucurbita maxima])

HSP 1 Score: 655.2 bits (1689), Expect = 3.2e-184
Identity = 344/355 (96.90%), Postives = 348/355 (98.03%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE+AP+GMEMALY+TENSNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPKGMEMALYKTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGS WPENDSITEHLLCTEPGDGE+EKSDEKLVRRRQKAENGVG  ERSSKGENSGGSFF
Sbjct: 181 AGSIWPENDSITEHLLCTEPGDGESEKSDEKLVRRRQKAENGVGAPERSSKGENSGGSFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300

Query: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           D   SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 D---SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

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BLAST of Carg06652 vs. NCBI nr
Match: XP_022954511.1 (uncharacterized protein LOC111456756 [Cucurbita moschata])

HSP 1 Score: 652.1 bits (1681), Expect = 2.7e-183
Identity = 343/355 (96.62%), Postives = 346/355 (97.46%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNS  SSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSSPSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE+APEGMEMALYRTE+SNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPEGMEMALYRTEDSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGSFWPEN+SITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGT ERSSKGENS G FF
Sbjct: 181 AGSFWPENESITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTPERSSKGENSSGGFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300

Query: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           D   SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 D---SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

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BLAST of Carg06652 vs. ExPASy Swiss-Prot
Match: Q6P606 (LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rerio OX=7955 GN=lysmd4 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 33/105 (31.43%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 5   NSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRI 64
           +SSS    G G    +E  IS  D L+ +A++YG +VADI+R+N L  +  M+ALK ++I
Sbjct: 55  DSSSKEKEGVGEMLLLERDISHEDNLSKLALQYGCKVADIKRVNNLFQEQDMYALKSIKI 114

Query: 65  PLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSR 110
           P+      + ++S+  T        + P H   P++   +  S R
Sbjct: 115 PVRKHGLLTEAISELRT------PQQRPSHDAAPSNSAMASVSGR 153

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BLAST of Carg06652 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-04
Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 4   SNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLR 63
           S  S++ V+      YIEH++S  DTL GIA+KYGV +  I+R N L +   +F  K L 
Sbjct: 45  SYGSTASVAAPLSERYIEHRLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSLN 104

Query: 64  IPL 67
           IP+
Sbjct: 105 IPV 107

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BLAST of Carg06652 vs. ExPASy Swiss-Prot
Match: A0JNI1 (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos taurus OX=9913 GN=LYSMD1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 20 IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPL 67
          +EHQ++  DTLAG+A+KYGV +  I+R N L  +  +F  K L IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIPI 86

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BLAST of Carg06652 vs. ExPASy Swiss-Prot
Match: Q99LE3 (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus musculus OX=10090 GN=Lysmd3 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.1e-04
Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 24  ISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRI-------------PLPGRH 83
           I + DTL  +A++Y   VADI+R+N L +D   FAL+ ++I             PL GRH
Sbjct: 69  IQEGDTLNAVALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKRFSSLTETLHPLKGRH 128

Query: 84  ----PPSPSLSDASTVTGSGSVN 90
               PP P   +   V   GS++
Sbjct: 129 ILHPPPVPYFQEQDIVPADGSLS 151

[Close]

BLAST of Carg06652 vs. ExPASy Swiss-Prot
Match: Q9D7V2 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Lysmd2 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.0e-04
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 19  YIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHP------P 78
           ++EH++   DTL GIA+KYGV +  I+R N L  +  +F  K L IP+    P       
Sbjct: 70  HVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLSIPILSEKPLLFNGLN 129

Query: 79  SPSLSDASTVTGSGSVNEEPL 94
           S    ++ TV  S    EEP+
Sbjct: 130 SIDSPESETVDSSFCQEEEPV 150

[Close]

BLAST of Carg06652 vs. ExPASy TrEMBL
Match: A0A6J1K4A2 (uncharacterized protein LOC111490532 OS=Cucurbita maxima OX=3661 GN=LOC111490532 PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 1.5e-184
Identity = 344/355 (96.90%), Postives = 348/355 (98.03%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE+AP+GMEMALY+TENSNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPKGMEMALYKTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGS WPENDSITEHLLCTEPGDGE+EKSDEKLVRRRQKAENGVG  ERSSKGENSGGSFF
Sbjct: 181 AGSIWPENDSITEHLLCTEPGDGESEKSDEKLVRRRQKAENGVGAPERSSKGENSGGSFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300

Query: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           D   SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 D---SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Carg06652 vs. ExPASy TrEMBL
Match: A0A6J1GR40 (uncharacterized protein LOC111456756 OS=Cucurbita moschata OX=3662 GN=LOC111456756 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.3e-183
Identity = 343/355 (96.62%), Postives = 346/355 (97.46%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNS  SSRLKSPNP ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSSPSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGLVSRTVE+APEGMEMALYRTE+SNFIDDGLFPKTSELSTPPSNIHSKTRKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPEGMEMALYRTEDSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGSFF 240
           AGSFWPEN+SITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGT ERSSKGENS G FF
Sbjct: 181 AGSFWPENESITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTPERSSKGENSSGGFF 240

Query: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300
           SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ
Sbjct: 241 SGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLRDQ 300

Query: 301 DSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           D   SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 D---SSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Carg06652 vs. ExPASy TrEMBL
Match: A0A6J1C8W2 (uncharacterized protein LOC111009048 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009048 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.2e-152
Identity = 296/358 (82.68%), Postives = 315/358 (87.99%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS+SG+SGHGGPNYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRH PSPSLSDAS +TGSG VNEEPLHLGQPT MLNSLQS RLK PN  AS A
Sbjct: 61  KLRIPLPGRHLPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGL S+T+E A EGMEMA+YRTENSN  DDGLF +TS LS PP NIH K RKY
Sbjct: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGS 240
           AGSF+PENDSITEHLL  EPGDGE+EKSDEKLVRRRQK E  NG+GT ER  KGENSGG 
Sbjct: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240

Query: 241 FFS-GSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 300
           +FS  SNGK LAMR KSVSRSMLL D+DPV INSIPVGLGDAIITDGISEVHKS STSNL
Sbjct: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300

Query: 301 RDQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           RDQD     S++SASVW TT+WSLKPDLQALSS +I+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQD-----SNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353

[Close]

BLAST of Carg06652 vs. ExPASy TrEMBL
Match: A0A5D3BJ15 (Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002680 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.5e-152
Identity = 293/357 (82.07%), Postives = 320/357 (89.64%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS+SGV+GHGG NYIEHQIS+MDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDAS VTG+GSVNEEPLHLGQPT+MLNSLQS RLKSPN  ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGL S+T++++   MEM++YRTENSN I DGLF +TS LSTPP NI+SKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIYSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGS 240
           AGSFW ENDSITEHLL T+ GDGE+EKSDEKLVRRRQKAE  NGV T ERS K ENS GS
Sbjct: 181 AGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSENSNGS 240

Query: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           +FS SNGKSLAMRLKSVSR++L SDSDPVRINSIPVGLGD IIT+G  EVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLSTSNLR 300

Query: 301 DQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           DQD+S+S+      VW+T++WSLKPDLQALSS +I KPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDNSNST-----FVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Carg06652 vs. ExPASy TrEMBL
Match: A0A1S3CUG8 (uncharacterized protein LOC103504667 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504667 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.5e-152
Identity = 293/357 (82.07%), Postives = 320/357 (89.64%), Query Frame = 0


Query: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60
           MSPSNSS+SGV+GHGG NYIEHQIS+MDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120
           KLRIPLPGRHPPSPSLSDAS VTG+GSVNEEPLHLGQPT+MLNSLQS RLKSPN  ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180
           MSTLQKYYGL S+T++++   MEM++YRTENSN I DGLF +TS LSTPP NI+SKTRKY
Sbjct: 121 MSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIYSKTRKY 180

Query: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTQERSSKGENSGGS 240
           AGSFW ENDSITEHLL T+ GDGE+EKSDEKLVRRRQKAE  NGV T ERS K ENS GS
Sbjct: 181 AGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSENSNGS 240

Query: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           +FS SNGKSLAMRLKSVSR++L SDSDPVRINSIPVGLGD IIT+G  EVHKSLSTSNLR
Sbjct: 241 YFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLSTSNLR 300

Query: 301 DQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           DQD+S+S+      VW+T++WSLKPDLQALSS +I KPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDNSNST-----FVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Carg06652 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 235.3 bits (599), Expect = 7.3e-62
Identity = 171/371 (46.09%), Postives = 220/371 (59.30%), Query Frame = 0


Query: 3   PSNSSSSGVSGHGGPN--YIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 62
           P +SSS    G   P+  YIEH+ISK DTLAG+AIKYGVEVAD++++N L  DLQMFALK
Sbjct: 59  PPSSSSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALK 118

Query: 63  KLRIPLPGRHPPSPSLSDASTVTGSG---SVNEEPLHLGQPTDMLNSLQSSRLKSPNPNA 122
            L+IPLPGRHPPSP LS+ S   G G      E P H  Q  ++ +S QS RLKS     
Sbjct: 119 SLQIPLPGRHPPSPCLSNGSLNHGEGCSCHEPESPNHSEQ--EVFDSFQSLRLKSSEKKV 178

Query: 123 SPAMSTLQKYYGL--VSRTVESAPEGMEMALYRTENSNFI----DDGL---FPKTSELST 182
           SPAM +LQ YYGL    RTV S     EM  Y+TE S+ I    D+G    FP T+    
Sbjct: 179 SPAMYSLQGYYGLKPADRTV-SDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTN---- 238

Query: 183 PPSNIHSKTRKYAGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVG--TQ 242
            P N H K+R    +   E +          P +   E + +K +RRRQK+E      T 
Sbjct: 239 TPLNHHRKSRSLVNALIEEVNQ--------SPDNNTQEPTSDKFMRRRQKSEADFSSRTP 298

Query: 243 ERSSKGEN--SGGSFFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDG 302
           E   K EN  S G F S + GK LA+R K+ SR+ L ++S+    N + + L DA ++D 
Sbjct: 299 ELVLKEENGSSNGGFLSIA-GKGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDS 358

Query: 303 ISEVHKSLSTSNLRDQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNP 356
            S V KS S S+L+D D   +S++ S S+W T++WSLKPDL  L+ A+IT  +FDGLP P
Sbjct: 359 FSSVRKSSSASSLQDPD--GNSNNGSLSLWPTSKWSLKPDL--LTPAAITSSIFDGLPKP 409

[Close]

BLAST of Carg06652 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-57
Identity = 154/358 (43.02%), Postives = 212/358 (59.22%), Query Frame = 0


Query: 3   PSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKL 62
           P++S  S  S   G  YIEH++SK DTLAGIAIKYGVEVADI +LNGL  DLQMFAL+ L
Sbjct: 55  PTSSPPSSASTCAG--YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESL 114

Query: 63  RIPLPGRHPPSPSLSDASTVTGS--GSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 122
           RIPLPGRHPPSP LS+ S   G             G   D+ +S QS RL       SPA
Sbjct: 115 RIPLPGRHPPSPCLSNGSLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEKKISPA 174

Query: 123 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 182
           M++LQ YYGL  +    A EG  MA+Y+ E S   D+  +      ++ P + H K+R  
Sbjct: 175 MNSLQGYYGLKPKN-RRASEGFGMAVYKNEASQLQDNDQYLTPFPATSTPLSHHRKSRSL 234

Query: 183 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQ--ERSSKGEN-SGG 242
             +   E   + +    ++ G GE   +D K +RRRQK+E    ++  E   K EN S  
Sbjct: 235 VDAVIAE---VNQSPNPSKAGGGEVNSTD-KPMRRRQKSEADFSSRAPELLLKEENRSSS 294

Query: 243 SFFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 302
             FS   GK+LA+R K+ SR+ L +++    +NSIP+ L DA + D  S V KS+S S+L
Sbjct: 295 GAFSAIAGKNLALRSKASSRANLSAETR--HLNSIPINLMDAPVGDSFSSVRKSVSASSL 354

Query: 303 RDQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 356
           ++ + +S+ S    S+W T++W+LKP+L  L+  ++   +FDGLP P+TGRRNK A+D
Sbjct: 355 QEPNCNSNGS----SLWPTSKWTLKPEL--LTQVAMASSIFDGLPKPLTGRRNKKAVD 397

[Close]

BLAST of Carg06652 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.8e-04
Identity = 18/47 (38.30%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPL 67
           I H+I + D++  +A+KY V+V DI+RLN + +D  +++  +L IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

[Close]

BLAST of Carg06652 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.8e-04
Identity = 18/47 (38.30%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPL 67
           I H+I + D++  +A+KY V+V DI+RLN + +D  +++  +L IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

[Close]

BLAST of Carg06652 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.8e-04
Identity = 18/47 (38.30%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPL 67
           I H+I + D++  +A+KY V+V DI+RLN + +D  +++  +L IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

The following BLAST results are available for this feature:

BLAST of Carg06652 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012173.1	3.5e-191	100.00	hypothetical protein SDJN02_24925 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6572989.1	5.3e-187	98.31	LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cu...	[more]
XP_023542393.1	3.4e-186	98.03	uncharacterized protein LOC111802312 [Cucurbita pepo subsp. pepo]	[more]
XP_022994944.1	3.2e-184	96.90	uncharacterized protein LOC111490532 [Cucurbita maxima]	[more]
XP_022954511.1	2.7e-183	96.62	uncharacterized protein LOC111456756 [Cucurbita moschata]	[more]

BLAST of Carg06652 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P606	1.1e-04	31.43	LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rer...	[more]
Q3B7I8	1.8e-04	42.86	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus t...	[more]
A0JNI1	2.3e-04	46.81	LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos tauru...	[more]
Q99LE3	3.1e-04	34.94	LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus muscu...	[more]
Q9D7V2	4.0e-04	35.80	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Mus muscu...	[more]

BLAST of Carg06652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K4A2	1.5e-184	96.90	uncharacterized protein LOC111490532 OS=Cucurbita maxima OX=3661 GN=LOC111490532...	[more]
A0A6J1GR40	1.3e-183	96.62	uncharacterized protein LOC111456756 OS=Cucurbita moschata OX=3662 GN=LOC1114567...	[more]
A0A6J1C8W2	1.2e-152	82.68	uncharacterized protein LOC111009048 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3BJ15	3.5e-152	82.07	Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucu...	[more]
A0A1S3CUG8	3.5e-152	82.07	uncharacterized protein LOC103504667 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg06652 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08200.1	7.3e-62	46.09	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	1.1e-57	43.02	Peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.1	1.8e-04	38.30	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	1.8e-04	38.30	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	1.8e-04	38.30	peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 21..65 e-value: 3.7E-4 score: 29.8
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 24..65 e-value: 6.2E-5 score: 23.0
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 20..64 score: 10.758001
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 20..64 e-value: 6.81104E-8 score: 46.3245
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 5..72 e-value: 3.1E-13 score: 51.0
IPR036779	LysM domain superfamily	SUPERFAMILY	54106	LysM domain	coord: 20..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..222
None	No IPR available	PANTHER	PTHR20932:SF36	PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN	coord: 6..355
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 6..355

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06652-RA	Carg06652-RA	mRNA