Carg06641 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06641
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Endoplasmic reticulum transmembrane protein
Location	Carg_Chr18: 397109 .. 400333 (+)
RNA-Seq Expression	Carg06641
Synteny	Carg06641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGAAAAAGAAAATTGGACCGAGGGAGAAGAAAGAGGGCGTCGAAGACAAAGAGAAGAAGCAAAAGAAGGGCATTTGATCGAAAATGGCGTTGCAGTGGGTGCTATTGGCTTATACGGTGGCGGTGGAGGTTGCCGTCGCCATTCTGCTGACGATTCCTTCACCCAAGCTGCTCAAGAAACGCATCGTCTCTCTGATTTCACTCATTCTTCAACCTGCACTCTTCGTCGTGCCCTTCGCCGGCTTTCAGATTCTAGGTTTTTGCCCTTTTACTTGCTGCTATTCTTCAACTTTGATTTTTGATTGTTGTGAATCGCAACCTGGTGGCCGATGTTATGCTAATCTTGGCTGCGACCTGAGATCGGACTTTTATTTCTGAGGTTTCTTGTTGTACTGTGTAGATATATACTGGAAGAATGAGCATCGGTTGAAGTGCACATCTGAGATATGCACTGCTTCTGAGAGAGATCGATATGAGAAAACCGTAAGTACTAATCTCAAGTTGCGGTTATAATTTGTCGTATTATTTAGTTAGTGCTCAATGATGCATTAGATTGTTTTGAAGCCCGTGGATTAGATGATTAAACTGTTTAATTTCGTCAACGCTAGCAATTGTTAGAATTTCAACGGATTAGAGATTGATGAAATGTGGATGCATAACGCAAAACTAAAGGATTTAGTAACTAACCTATTGAGGTATCGTTCAAGGATGGAGAATGCATAATTGGACCACGTTGTCTTGTCTATAGTCTTGAACTCTGGTTATCCTCACAATATTGTTTCATATTACAGTTTTCACATTCCTTATTCCTGTTGCTACCCCATGTTCCATTCTTCCATTTTCCTACTGTGCTTGATCATGATTCTACCGATGAACATTCCTTCTCGTTCAAGTGATATTGAGTCCTTCAAACTTTTTGGAGAGAAAAGGATTGAAGTGTTGGAACGACTCTTTTTAGTTTATGATTCTACGCACACTATTCTATGTTGTAGTTGTTAGATGATGAAAGTCCCACGTCGACTAATTTAGGGAATGATCATGGATTTATAAACAAAGAATACTATCTCCATTGGTTTGAGGATTTTTGGGGAAGCCCAAAGCAAAGTCACGAGAGCTTATGCTCAAATTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACAGTAGTATATGAATCTGTCAGCAAATAATATCAGTTAGCTGTTAGCCGTGGGGTTTTATGATGGCCTATATCATTTTCATATGATTTAATTGGAGAATAAACAGGGTTGGGCGGTGGAGTGGAAATGATATGATGGTTTACGTCCAAATCATTAGAAAATCAAATATCGTGTTCGAGATAGTAGGATATCATCTGGATGATTAGGTAGTGGGTAGAAGTTGGTGAACAACGACGTTGGTGCCAAAGATTTGCTTGTCAAAATAAGGTGGTGGACTGTAGTGGGGTGGGTGGGTGAGTTGGAAAGAAAAGGTAAATTGGAATGGAATCAATATGGAACTCAAAATAATTGGGAATGTGTTGCAAGTTCTGGTGAGGTATGAAAACATCTTTCTATATGATTATTATTTCCCTGAGAAATCCTTTCTTTTTTATATATATAAAAATATCACGACCCACAACATGGAAAGATGTTCTTTCTTTCTACAATTTGAAAACCCAGCTCTCTCTGCACTTTGCAGCATGAATCCTCAGTCACAATATAAATTGGGTTATTTTTCTCTCATATGCAATCCGGAAAACCCCACAATATTTGTGAGATCCCATGTCGATTGAAGAAGACAATGAGTGCCAATAAGGAAGTCGGGCCTCGAAGGGGGTGGATTGTGAGATCCCACGTCGGTTGGAGGGGGAACAAAGTATTCTTTATAAGGGTGTGAAAACCTTTCCTAAGCCGACGCATTTTAAAACCGTGAGACTGACGGTAATATGTAACAAGCTAAAGCGGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTATTGGTGTGGATTATTTCTCTTCTCTGCAATCTAATAAAATCCCTCACATAGATAGGTTTTCTGTTATATATGCAATCTGAAAAAAAAAAACCCACAATGAATATGTTTCCTTATATGCAATATAATAGGTTTCCCCCCTTCTGCAATCTATGAAAAGAAACCCAAGGCAGGAAAAAAAAAGACAAGAAAATGGGGACAATAGGGAACTTGAACGTGCCTATGCAATAAATTCACATAAAACCACCTCAATTTCCATTCTTTGTATAAAAAAGAGAAAAAAAAAAATCAACATTATTTTTGAAAAAAAAAATTGCAAGATCATTATCTCTGATCTCAACCTGAAAATGATACCCGTACGACTGTGCTTGCTATAATGTAGTGATTGTGTGAGATCCCGCATCAATTGGAGAAGGAAACGAGTGCCAATGAAGACGCTGGTTCCAAAGGGGGTAGATTATGAGATCCTACATATGTTGGGGGAGGAGAACGAAACATTTTTTATAATGGTATGGAAACCTCTCCTTAGCAGACGCGTTTTATAAACCTTGAGGAAAAGTCCAAAAAGGACCATATCTGCTAGCATGAACTCAAAATCGTTACAGATTGCGAGGCTGCTTGTCTATCCTTTTTATCTATGGTGAACAAACAGAATTGCCTCCCTTCCCTGCTCTCTACTATGCTATTCTTTGCTCTTCTTTACTTGCTCCCAACCCTTACCAGTAATGTTTATTATACAGAACTATAAAGCTCAGAGGAACGTGATTCTATGTGTTTGTGCATGCCTCCTCTACTGGTATGATACAATGAAACCCTTTTCGGTCGAAGTTTTTTCTCGTGTCAGCTTCTTACAGTCTAAACTGCCATCTACCATATGCATGCAGGTGTATCTATCGCATTTGCAAGTATAACCAAGAGATTGAAAGATTGGAGGAGGTAGAAAAGAGATACAAAGAGCAGTAGATTTCAGGAAGTGTGAAATCCTGTTACATGTGGTAATGGTTTTGATCATTTCAATACTTGAATCTTTGTTTGTACTCGAGTATGAGAATTATGACATTATTAGAACACCATAACTTTGCTGGTTTAGCTTGGTCAAGTTTTAAGCTCTATGGACAAACTTTTTTTTCTTTTTCTTTTTGCCTTTTATTACAACTGAAAAGCGAAGGTAGATATGATTTTGTACCTCATCATAGAGTCACTGCCGTTGGATTAATGAGAATAAATCAAATTTTTAAGC

mRNA sequence

AAAGGAAAAAGAAAATTGGACCGAGGGAGAAGAAAGAGGGCGTCGAAGACAAAGAGAAGAAGCAAAAGAAGGGCATTTGATCGAAAATGGCGTTGCAGTGGGTGCTATTGGCTTATACGGTGGCGGTGGAGGTTGCCGTCGCCATTCTGCTGACGATTCCTTCACCCAAGCTGCTCAAGAAACGCATCGTCTCTCTGATTTCACTCATTCTTCAACCTGCACTCTTCGTCGTGCCCTTCGCCGGCTTTCAGATTCTAGATATATACTGGAAGAATGAGCATCGGTTGAAGTGCACATCTGAGATATGCACTGCTTCTGAGAGAGATCGATATGAGAAAACCAACTATAAAGCTCAGAGGAACGTGATTCTATGTGTTTGTGCATGCCTCCTCTACTGGTGTATCTATCGCATTTGCAAGTATAACCAAGAGATTGAAAGATTGGAGGAGGTAGAAAAGAGATACAAAGAGCAGTAGATTTCAGGAAGTGTGAAATCCTGTTACATGTGGTAATGGTTTTGATCATTTCAATACTTGAATCTTTGTTTGTACTCGAGTATGAGAATTATGACATTATTAGAACACCATAACTTTGCTGGTTTAGCTTGGTCAAGTTTTAAGCTCTATGGACAAACTTTTTTTTCTTTTTCTTTTTGCCTTTTATTACAACTGAAAAGCGAAGGTAGATATGATTTTGTACCTCATCATAGAGTCACTGCCGTTGGATTAATGAGAATAAATCAAATTTTTAAGC

Coding sequence (CDS)

ATGGCGTTGCAGTGGGTGCTATTGGCTTATACGGTGGCGGTGGAGGTTGCCGTCGCCATTCTGCTGACGATTCCTTCACCCAAGCTGCTCAAGAAACGCATCGTCTCTCTGATTTCACTCATTCTTCAACCTGCACTCTTCGTCGTGCCCTTCGCCGGCTTTCAGATTCTAGATATATACTGGAAGAATGAGCATCGGTTGAAGTGCACATCTGAGATATGCACTGCTTCTGAGAGAGATCGATATGAGAAAACCAACTATAAAGCTCAGAGGAACGTGATTCTATGTGTTTGTGCATGCCTCCTCTACTGGTGTATCTATCGCATTTGCAAGTATAACCAAGAGATTGAAAGATTGGAGGAGGTAGAAAAGAGATACAAAGAGCAGTAG

Protein sequence

MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLEEVEKRYKEQ

Homology

[Close]

BLAST of Carg06641 vs. NCBI nr
Match: XP_022955053.1 (uncharacterized protein LOC111457130 [Cucurbita moschata] >KAG7012162.1 hypothetical protein SDJN02_24914 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE
Sbjct: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYKEQ
Sbjct: 121 EVEKRYKEQ 129

[Close]

BLAST of Carg06641 vs. NCBI nr
Match: XP_023541197.1 (uncharacterized protein LOC111801431 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.4 bits (638), Expect = 8.6e-63
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL CTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE
Sbjct: 61  WKNEHRLMCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYKEQ
Sbjct: 121 EVEKRYKEQ 129

[Close]

BLAST of Carg06641 vs. NCBI nr
Match: XP_022994132.1 (uncharacterized protein LOC111489960 [Cucurbita maxima])

HSP 1 Score: 247.7 bits (631), Expect = 5.6e-62
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQWVLLAYTVAVE AVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWVLLAYTVAVEAAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL CTSEICTA+ERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYKEQ
Sbjct: 121 EVEKRYKEQ 129

[Close]

BLAST of Carg06641 vs. NCBI nr
Match: KAG6572980.1 (UV-B-induced protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-59
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE
Sbjct: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120

Query: 121 E 122
           E
Sbjct: 121 E 121

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BLAST of Carg06641 vs. NCBI nr
Match: XP_008466920.1 (PREDICTED: uncharacterized protein LOC103504239 [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 4.1e-57
Identity = 116/129 (89.92%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQW+LLAYTVAVE A+AILLT+PSPKLLKKR VSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWMLLAYTVAVEAAIAILLTVPSPKLLKKRFVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL CTSEICTA+ERDRYEK+ YKAQRNVILCV ACLLYWCIYR+CKYN+EIE LE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCVAACLLYWCIYRVCKYNKEIESLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYKEQ
Sbjct: 121 EVEKRYKEQ 129

[Close]

BLAST of Carg06641 vs. ExPASy TrEMBL
Match: A0A6J1GSV9 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111457130 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.4e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE
Sbjct: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYKEQ
Sbjct: 121 EVEKRYKEQ 129

[Close]

BLAST of Carg06641 vs. ExPASy TrEMBL
Match: A0A6J1JUV5 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111489960 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.7e-62
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQWVLLAYTVAVE AVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWVLLAYTVAVEAAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL CTSEICTA+ERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYKEQ
Sbjct: 121 EVEKRYKEQ 129

[Close]

BLAST of Carg06641 vs. ExPASy TrEMBL
Match: A0A1S3CSB5 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo OX=3656 GN=LOC103504239 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57
Identity = 116/129 (89.92%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQW+LLAYTVAVE A+AILLT+PSPKLLKKR VSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWMLLAYTVAVEAAIAILLTVPSPKLLKKRFVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL CTSEICTA+ERDRYEK+ YKAQRNVILCV ACLLYWCIYR+CKYN+EIE LE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKSIYKAQRNVILCVAACLLYWCIYRVCKYNKEIESLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYKEQ
Sbjct: 121 EVEKRYKEQ 129

[Close]

BLAST of Carg06641 vs. ExPASy TrEMBL
Match: A0A6J1KNQ5 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111495845 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.5e-57
Identity = 115/129 (89.15%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQW+LLAYTVAVE A+AILLTIPSPKLLK+R VSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWMLLAYTVAVEAAIAILLTIPSPKLLKQRFVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL CTSEICTA+ERDRYEK+ +KAQRNVILCVCACLLYWCIYRICKYN++IE LE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKSIFKAQRNVILCVCACLLYWCIYRICKYNKDIESLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYK+Q
Sbjct: 121 EVEKRYKDQ 129

[Close]

BLAST of Carg06641 vs. ExPASy TrEMBL
Match: A0A6J1E863 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111431679 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.5e-57
Identity = 115/129 (89.15%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQW+LLAYTVAVE A+AILLTIPSPKLLK+R VSLISLILQPALFVVPFAGFQILDIY
Sbjct: 1   MALQWMLLAYTVAVEAAIAILLTIPSPKLLKQRFVSLISLILQPALFVVPFAGFQILDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL CTSEICTA+ERDRYEK+ +KAQRNVILCVCACLLYWCIYRICKYN++IE LE
Sbjct: 61  WKNEHRLMCTSEICTAAERDRYEKSIFKAQRNVILCVCACLLYWCIYRICKYNKDIESLE 120

Query: 121 EVEKRYKEQ 130
           EVEKRYK+Q
Sbjct: 121 EVEKRYKDQ 129

[Close]

BLAST of Carg06641 vs. TAIR 10
Match: AT1G48440.1 (B-cell receptor-associated 31-like )

HSP 1 Score: 191.4 bits (485), Expect = 4.4e-49
Identity = 90/129 (69.77%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQW++L+Y VAVEV + ++LT+P P LLKKR+V L+SLILQPA  +V FAGFQ+LDIY
Sbjct: 1   MALQWLILSYVVAVEVVITLVLTLPYPMLLKKRVVQLVSLILQPAASIVAFAGFQLLDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WK EHRL C+SE+CTA+ERDRYEK+ YKAQRNV+LC    LLYWCIYRICKYN+++ERLE
Sbjct: 61  WKAEHRLSCSSEVCTATERDRYEKSIYKAQRNVVLCAAGILLYWCIYRICKYNKDLERLE 120

Query: 121 EVEKRYKEQ 130
             EKR+KE+
Sbjct: 121 ATEKRFKEE 129

[Close]

BLAST of Carg06641 vs. TAIR 10
Match: AT3G17780.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT1G48440.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 188.7 bits (478), Expect = 2.9e-48
Identity = 89/129 (68.99%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MALQW++L+Y VA EVA+A++LT+P P LLKKRIVSLISLIL PA  +V FAGFQ+LDIY
Sbjct: 1   MALQWLILSYVVAAEVAIAVILTLPYPMLLKKRIVSLISLILNPAASIVAFAGFQLLDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WKNEHRL C+SE+CT +ERDR+EK+ YKAQRN +LC    LLYWCI+RICKY++++ERLE
Sbjct: 61  WKNEHRLLCSSEVCTTTERDRHEKSVYKAQRNGVLCAAGILLYWCIFRICKYHKDLERLE 120

Query: 121 EVEKRYKEQ 130
           ++EKRYK++
Sbjct: 121 QLEKRYKDE 129

[Close]

BLAST of Carg06641 vs. TAIR 10
Match: AT5G17190.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-20
Identity = 51/129 (39.53%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MAL+WV+L Y  A E  + ILLT+P    L+K +V++   +L+P L ++PF  F ++DIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVILLTMPGLDALRKGLVAVTRNLLKPFLSIIPFCLFLLMDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WK E R  C  + CT SE  R++K+  K+QRN +L   A + YW +Y +      IE+L 
Sbjct: 61  WKYETRPSCDGDSCTPSEHLRHQKSIMKSQRNALLIASALVFYWILYSVTNLVVRIEQLN 120

Query: 121 EVEKRYKEQ 130
           +  +R K +
Sbjct: 121 QRVERLKNK 129

[Close]

BLAST of Carg06641 vs. TAIR 10
Match: AT3G03160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 4.8e-19
Identity = 49/129 (37.98%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 1   MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIY 60
           MAL+WV+L Y  A E  + +LLT+P    L+K +V++   +L+P L +VPF  F ++DIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVVLLTMPGLDGLRKGLVAVTRNLLKPFLSIVPFCLFLLMDIY 60

Query: 61  WKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRICKYNQEIERLE 120
           WK E    C  + CT SE  R++K+  K+QRN +L   A + YW +Y +     +IE L 
Sbjct: 61  WKYETMPSCDGDSCTPSEHLRHQKSMMKSQRNALLIAAALVFYWILYSVTNLVVKIEHLN 120

Query: 121 EVEKRYKEQ 130
           +  +R + +
Sbjct: 121 QRIERLRNK 129

The following BLAST results are available for this feature:

BLAST of Carg06641 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955053.1	1.7e-63	100.00	uncharacterized protein LOC111457130 [Cucurbita moschata] >KAG7012162.1 hypothet...	[more]
XP_023541197.1	8.6e-63	99.22	uncharacterized protein LOC111801431 [Cucurbita pepo subsp. pepo]	[more]
XP_022994132.1	5.6e-62	97.67	uncharacterized protein LOC111489960 [Cucurbita maxima]	[more]
KAG6572980.1	2.6e-59	100.00	UV-B-induced protein, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_008466920.1	4.1e-57	89.92	PREDICTED: uncharacterized protein LOC103504239 [Cucumis melo]	[more]

BLAST of Carg06641 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg06641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSV9	8.4e-64	100.00	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JUV5	2.7e-62	97.67	Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3CSB5	2.0e-57	89.92	Endoplasmic reticulum transmembrane protein OS=Cucumis melo OX=3656 GN=LOC103504...	[more]
A0A6J1KNQ5	4.5e-57	89.15	Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1E863	4.5e-57	89.15	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Carg06641 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48440.1	4.4e-49	69.77	B-cell receptor-associated 31-like	[more]
AT3G17780.1	2.9e-48	68.99	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]
AT5G17190.1	2.5e-20	39.53	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]
AT3G03160.1	4.8e-19	37.98	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..129
None	No IPR available	PANTHER	PTHR12701:SF53	SUBFAMILY NOT NAMED	coord: 1..129
IPR040463	BAP29/BAP31, transmembrane domain	PFAM	PF05529	Bap31	coord: 1..121 e-value: 1.0E-6 score: 28.6
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06641-RA	Carg06641-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0070973	protein localization to endoplasmic reticulum exit site
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum