Carg06627 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06627
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WUSCHEL-related homeobox 1-like
Location	Carg_Chr18: 314462 .. 317022 (-)
RNA-Seq Expression	Carg06627
Synteny	Carg06627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGGGAGAGAGATTGGGAGAGAGAGGGTTCCCACTCAAAAAGTTTGAATTTTTTTACACCCTTTGAGCTCTAGTTTGCAATCCCATTAAAGGGTTACTACCAATTTAGTATTATTAGTTGTTTTTTTTTTTATGAACATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAACTTCGACCGCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGTACTTACAAAATCTTTCCTTTTTTTCATTACTTTCCTTCAAATCCGTTCATATTCACCGGATTTTAATGTTCTGTAGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTACTGGAGGAATTGTACCGCCGGGGGACTCGAACACCATCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGTAACAAAAAAATCCGACCATTTGAAATGTTTTTTTGTTCATGATTTTGTGAAATTTAAGCGATAAAAAAGGAAGAAAATTGATGTGTTTGAACCCGTGACATAGATTTTTGTCGTGAAGAGGCACAAATTTTGTCTTTGGGAGTTGTTCTAAACATTCTATTTGTTTGTTGATATGTAAAGTCGTATTCTTTTTGTCTTACTTTTTGTCAACAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCGTACACTTGTGGAGGTTTCTATTTTCTTTCTCTCACTTTTTTTTTCTGTGTTCTAATAAAAACCCCATTTTTACAACAAATCATGCTTTATCGTTTCGTTTAGCGTAAGTTTTAGTGGCTTTACGCTTACTTACATGTTCTCGATCTTCATTTCTCTCTTAATTAGCTAATGTGAGGCTTTAACAATGTCCGTCTCGAATAAAGTAACGTTGAGTTTCTTCCTAAATAGTTGGTACTATTCGGGTCAACTCCTTTTTTTTTCATGGGTCTTCACTATTAAGATACATCAAGACTCACAACTTCTTTGTTCGACACTTGAAAATTTTATTGAGCTATTCGGGTCAACTCCGTTCGAGACTTGCAACTTCTTTGTTTGACACCTGAAAATTCTATTGAGTTGTCGGGGTCAAATCCTTTTCTCCATGGATTTTCACTATGAAGACACAACTTCTTTGTTCAACACCTGAAAATTCTATTGAGCTATCTGAGTCGACTCGTTTTCTCCACGGATCTTCACTACGAGGACACATTCGAGACCCACAACTTCTTTGTTCGACGCTCGAAAATTCTATTGAGCTATCTGGGTCAACTCCTTTTCTCCTTTTCTCCTCGGATTTTTTATATGAAGACACCTTTGAGACTCGCAACTTCTTATTTGACCACCCGAAAATTGTTTGAGCTATCTGGGTCAACTTCTTTTCTCCACGGATCTTCACTAAGATCTTACAACTTCTTTGTCCGACACCCGAAAATTCCATTAAGCCAGTTCAATAGAGCTGATCAACACCTCCGAAACTGAAATGATCTTCATGTTAATTAGTCAACATCGGTTCTCGAACATAGTTAGTCTAGAAGAATGTTTGGTGATGATTATTCAAACCATCCCATGCATGAAATGATGAGGTAATGGGAAGGGTAGCTTTAAGGTGAAAAAGTTATTATAGCGTGTGATAAAGAAAAGATGTTGAAGAAGGAAGAAGGAAGGGAACAAAAAGCTTAGCTTAGTTTGTTGGGAAATGAAAAGGCTCCAAAAGCTGCATTCCTTCCTTTCTGTCGGCTCTATACCTCCCTCCCCCTCATATCAAACTTTGAACATCATCTTCCCCCCTTTGCGTCTTTTCATGCCATCCCGACTCTCTACAGTAAGTATGATGTTGTCCATTTTGAGCATAACCGCTCGTGTCTTTGCTTTAGGCTTCCCCAAAAGACCTCGTATTACTTACTTATAAACCCATGATCGTTCTCGAAATTCTCACAGGAATCTCTTCCAATCCAACGCGTGCCAAAAGATAGCACCATGACACAAAATGGAAGCCTCCATTCTACGGCGGCCACTCCCGGCGGTGTCGGTGTCGGTGGCATTGGAGGCTGCAGGCAACTGATGATGAACACCGCCCCCATCGCCGCTACCACCACAACCGCGACAGTTACAACAATAATGCACCAAGATGATGGGGTTGAAGGATTAGAAGAATCAGAAACCCTACAACTATTTCCATTGTGCAGTGAGACAAGAAATGGTGGGTGTGAAACAGTGGGAAGCTCAGGGATGAACAGTGCTAATGTGATGACTCCACTTCAGTTCTTTGAATTCCTTCCATTGAAGAATTGA

mRNA sequence

GATTGGGAGAGAGATTGGGAGAGAGAGGGTTCCCACTCAAAAAGTTTGAATTTTTTTACACCCTTTGAGCTCTAGTTTGCAATCCCATTAAAGGGTTACTACCAATTTAGTATTATTAGTTGTTTTTTTTTTTATGAACATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAACTTCGACCGCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTACTGGAGGAATTGTACCGCCGGGGGACTCGAACACCATCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCGTACACTTGTGGAGGAATCTCTTCCAATCCAACGCGTGCCAAAAGATAGCACCATGACACAAAATGGAAGCCTCCATTCTACGGCGGCCACTCCCGGCGGTGTCGGTGTCGGTGGCATTGGAGGCTGCAGGCAACTGATGATGAACACCGCCCCCATCGCCGCTACCACCACAACCGCGACAGTTACAACAATAATGCACCAAGATGATGGGGTTGAAGGATTAGAAGAATCAGAAACCCTACAACTATTTCCATTGTGCAGTGAGACAAGAAATGGTGGGTGTGAAACAGTGGGAAGCTCAGGGATGAACAGTGCTAATGTGATGACTCCACTTCAGTTCTTTGAATTCCTTCCATTGAAGAATTGA

Coding sequence (CDS)

ATGAACATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAACTTCGACCGCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTACTGGAGGAATTGTACCGCCGGGGGACTCGAACACCATCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCGTACACTTGTGGAGGAATCTCTTCCAATCCAACGCGTGCCAAAAGATAGCACCATGACACAAAATGGAAGCCTCCATTCTACGGCGGCCACTCCCGGCGGTGTCGGTGTCGGTGGCATTGGAGGCTGCAGGCAACTGATGATGAACACCGCCCCCATCGCCGCTACCACCACAACCGCGACAGTTACAACAATAATGCACCAAGATGATGGGGTTGAAGGATTAGAAGAATCAGAAACCCTACAACTATTTCCATTGTGCAGTGAGACAAGAAATGGTGGGTGTGAAACAGTGGGAAGCTCAGGGATGAACAGTGCTAATGTGATGACTCCACTTCAGTTCTTTGAATTCCTTCCATTGAAGAATTGA

Protein sequence

MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAPPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEESLPIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIMHQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN

Homology

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BLAST of Carg06627 vs. NCBI nr
Match: KAG7012148.1 (WUSCHEL-related homeobox 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.4 bits (1544), Expect = 1.7e-167
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN 60
           MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN
Sbjct: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN 60

Query: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF 120
           APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF
Sbjct: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF 120

Query: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180
           QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE
Sbjct: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180

Query: 181 SLPIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM 240
           SLPIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM
Sbjct: 181 SLPIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM 240

Query: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN
Sbjct: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 296

[Close]

BLAST of Carg06627 vs. NCBI nr
Match: XP_022955094.1 (WUSCHEL-related homeobox 1-like [Cucurbita moschata])

HSP 1 Score: 594.0 bits (1530), Expect = 7.3e-166
Identity = 293/296 (98.99%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN 60
           MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN
Sbjct: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN 60

Query: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF 120
           APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSA+QIQHITAQLRRFGKIEGKNVFYWF
Sbjct: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWF 120

Query: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180
           QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE
Sbjct: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180

Query: 181 SLPIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM 240
           SLPI R PKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM
Sbjct: 181 SLPIPRAPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM 240

Query: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN
Sbjct: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 296

[Close]

BLAST of Carg06627 vs. NCBI nr
Match: XP_023541174.1 (WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 582.0 bits (1499), Expect = 2.9e-162
Identity = 287/296 (96.96%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN 60
           MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQ  TDQSKRELNN
Sbjct: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQXRTDQSKRELNN 60

Query: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF 120
           APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF
Sbjct: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF 120

Query: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180
           QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE
Sbjct: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180

Query: 181 SLPIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM 240
           SLPIQR PKD T TQNG LHSTAATPGGVG GG+GGCRQLMMNTAP+AATTTTATVTTIM
Sbjct: 181 SLPIQRAPKDCTKTQNGCLHSTAATPGGVGGGGVGGCRQLMMNTAPMAATTTTATVTTIM 240

Query: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN
Sbjct: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 296

[Close]

BLAST of Carg06627 vs. NCBI nr
Match: XP_022994694.1 (WUSCHEL-related homeobox 1-like [Cucurbita maxima])

HSP 1 Score: 573.9 bits (1478), Expect = 7.8e-160
Identity = 288/296 (97.30%), Postives = 290/296 (97.97%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 62
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60

Query: 63  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 122
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120

Query: 123 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEESL 182
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEESL
Sbjct: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEESL 180

Query: 183 PIQRVPKDSTMTQNGSLHSTAATPGGV-GVG-GIGGCRQLMMNTAPIAATTTTATVTTIM 242
           PIQR PKDST TQNG LHS+AATPGGV GVG GIGGCRQLMMNTAPIAATTTTATVTTIM
Sbjct: 181 PIQRAPKDSTRTQNGCLHSSAATPGGVGGVGIGIGGCRQLMMNTAPIAATTTTATVTTIM 240

Query: 243 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           HQ+DGVEGLEESETLQLFPLCSETRNGGCETV SSGMNSANVMTPLQFFEFLPLKN
Sbjct: 241 HQNDGVEGLEESETLQLFPLCSETRNGGCETVESSGMNSANVMTPLQFFEFLPLKN 296

[Close]

BLAST of Carg06627 vs. NCBI nr
Match: KAG7019913.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.5 bits (937), Expect = 4.2e-97
Identity = 225/349 (64.47%), Postives = 241/349 (69.05%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPS-------------TNDFFSQFYQM 62
           MWMMGYND GDLNF +DSF  R+LRPL+PRPLSS S             TNDFFSQF+ M
Sbjct: 1   MWMMGYNDAGDLNFPTDSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 63  G--TDQSKRELNNAPPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRR 122
              TDQ+KRELNNA PPPV+VSSRWNPTPEQLR+LEELYRRGTRTPSADQIQHITAQLRR
Sbjct: 61  ATVTDQNKRELNNA-PPPVLVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRR 120

Query: 123 FGKIEGKNVFYWFQNHKARERQKRRRQMES---SDQSICDIEILERKDSGSGRTVYEVEH 182
           +GKIEGKNVFYWFQNHKARERQKRRRQMES   +D S  +  ILERKDSGSGRTVYE E 
Sbjct: 121 YGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREAGILERKDSGSGRTVYE-EQ 180

Query: 183 TKNWPTSTNCRTLVEESLPIQRVPKDST----------MTQNGS-----LHSTAATPGGV 242
           TKNW  S+NC TL EES PIQ  P   T          + QN +      HST A  GG 
Sbjct: 181 TKNWAPSSNCTTLPEESAPIQPPPTPCTTHHGWIQFQSLVQNNNNAGICSHSTTALDGGG 240

Query: 243 GVGGIGGCRQLMMNTAPIAATT-TTATVTTIMHQ-----------DDGVEGLEES---ET 297
                    QLMMNTAPI  TT  T+TVTTIMH             +GVE LEES   ET
Sbjct: 241 A--------QLMMNTAPIPTTTAATSTVTTIMHSKSHTSNIGGFAPNGVEELEESEEVET 300

[Close]

BLAST of Carg06627 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-46
Identity = 148/366 (40.44%), Postives = 181/366 (49.45%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSDSFN-ARKLRPLIPRPLSSP-------STNDFFSQFYQMGTDQS 62
           MW MGYN+GG     +DSFN  RKLRPLIPR  S P       S + F      M  +Q+
Sbjct: 1   MWTMGYNEGG-----ADSFNGGRKLRPLIPRLTSCPTAAVNTNSDHRFNMAVVTMTAEQN 60

Query: 63  KRE---LNNAPP-PPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 122
           KRE   LN+ P  PPV+VSSRWNPTP+QLR+LEELYR+GTRTPSAD IQ ITAQLRR+GK
Sbjct: 61  KRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGK 120

Query: 123 IEGKNVFYWFQNHKARERQKRRRQMES-------SDQSICDIEILERKDSGSGRTVYEVE 182
           IEGKNVFYWFQNHKARERQKRRRQME+       S  S+      ++KD       Y+VE
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDKKDPPG----YKVE 180

Query: 183 HTKNWPTSTNCRT-----------------LVEESLPIQRVPKDSTMTQNGSLHSTAATP 242
             KNW  S  C T                  VE +       + S +  N +       P
Sbjct: 181 QVKNWICSVGCDTQPEKPSRDYHLEEPANIRVEHNARCGGDERRSFLGINTTWQMMQLPP 240

Query: 243 GGVGVGGIGGCRQLMMNT-----------------------APIAATTTTATVTTIMHQ- 297
                      R L++N+                       +P+   T  AT T   H+ 
Sbjct: 241 SFYSSSHHHHQRNLILNSPTVSSNMSNSNNAVSASKDTVTVSPVFLRTREATNTETCHRN 300

[Close]

BLAST of Carg06627 vs. ExPASy Swiss-Prot
Match: Q9ZVF5 (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23
Identity = 87/238 (36.55%), Postives = 117/238 (49.16%), Query Frame = 0


Query: 65  PVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHK 124
           P   + RWNPTPEQ+  LEELYR GTRTP+ +QIQ I ++LR++G+IEGKNVFYWFQNHK
Sbjct: 55  PAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHK 114

Query: 125 ARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPT--STNCRTLVEESL 184
           ARER KRRR+    +         + KDS SG   + V+ TK  P+   TN R   +  L
Sbjct: 115 ARERLKRRRR----EGGAIIKPHKDVKDSSSGG--HRVDQTKLCPSFPHTN-RPQPQHEL 174

Query: 185 PIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIMHQ 244
                 KD+         +  +      VG     R L+        T +       ++ 
Sbjct: 175 DPASYNKDNNANNEDHGTTEESDQRASEVGKYATWRNLV--------TWSITQQPEEINI 234

Query: 245 DDGVEGLEE----SETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           D+ V G EE    + TL LFP+       G     +   N         ++EF+PLKN
Sbjct: 235 DENVNGEEEETRDNRTLNLFPVREYQEKTGRLIEKTKACNYC------YYYEFMPLKN 271

[Close]

BLAST of Carg06627 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 17  SSDSFNARKLRPLIPRPLSSP------------STNDFFSQFYQMGTDQSKRELNNAPPP 76
           SS S + ++LRPL P+   SP            +T D  +      T  +K E    PP 
Sbjct: 21  SSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTGPTKFEHKRDPPH 80

Query: 77  PVVV---SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQ 134
            +      +RWNPT EQ+ +LE LY+ G RTP+A QI+HIT QL ++GKIEGKNVFYWFQ
Sbjct: 81  QLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQ 140

[Close]

BLAST of Carg06627 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 20  SFNARKLRPLIPRPLSSPSTNDFFS--QFYQMGTDQSKRELNNAPPPPVVVSSRWNPTPE 79
           +F+ + LRPL P+ +S P      +   F       + + LN     P   ++RWNP+ E
Sbjct: 40  AFSFKCLRPLAPK-ISLPEPRKMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAE 99

Query: 80  QLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRR 134
           Q+++LE LYR G RTP++ QI+ IT +L ++G+IEGKNVFYWFQNHKARERQK++R
Sbjct: 100 QIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKR 154

[Close]

BLAST of Carg06627 vs. ExPASy Swiss-Prot
Match: Q7XTV3 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 20  SFNARKLRPLIPRPLSSPSTNDFFS--QFYQMGTDQSKRELNNAPPPPVVVSSRWNPTPE 79
           +F+ + LRPL P+ +S P      +   F       + + LN     P   ++RWNP+ E
Sbjct: 40  AFSFKCLRPLAPK-ISLPEPRKMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAE 99

Query: 80  QLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRR 134
           Q+++LE LYR G RTP++ QI+ IT +L ++G+IEGKNVFYWFQNHKARERQK++R
Sbjct: 100 QIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKR 154

[Close]

BLAST of Carg06627 vs. ExPASy TrEMBL
Match: A0A6J1GUZ2 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457162 PE=3 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 3.5e-166
Identity = 293/296 (98.99%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN 60
           MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN
Sbjct: 1   MNMWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNN 60

Query: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWF 120
           APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSA+QIQHITAQLRRFGKIEGKNVFYWF
Sbjct: 61  APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWF 120

Query: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180
           QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE
Sbjct: 121 QNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEE 180

Query: 181 SLPIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM 240
           SLPI R PKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM
Sbjct: 181 SLPIPRAPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIM 240

Query: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN
Sbjct: 241 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 296

[Close]

BLAST of Carg06627 vs. ExPASy TrEMBL
Match: A0A6J1K3K5 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490342 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 3.8e-160
Identity = 288/296 (97.30%), Postives = 290/296 (97.97%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 62
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60

Query: 63  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 122
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120

Query: 123 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEESL 182
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEESL
Sbjct: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVEESL 180

Query: 183 PIQRVPKDSTMTQNGSLHSTAATPGGV-GVG-GIGGCRQLMMNTAPIAATTTTATVTTIM 242
           PIQR PKDST TQNG LHS+AATPGGV GVG GIGGCRQLMMNTAPIAATTTTATVTTIM
Sbjct: 181 PIQRAPKDSTRTQNGCLHSSAATPGGVGGVGIGIGGCRQLMMNTAPIAATTTTATVTTIM 240

Query: 243 HQDDGVEGLEESETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           HQ+DGVEGLEESETLQLFPLCSETRNGGCETV SSGMNSANVMTPLQFFEFLPLKN
Sbjct: 241 HQNDGVEGLEESETLQLFPLCSETRNGGCETVESSGMNSANVMTPLQFFEFLPLKN 296

[Close]

BLAST of Carg06627 vs. ExPASy TrEMBL
Match: A0A6J1KJ87 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.5e-97
Identity = 226/344 (65.70%), Postives = 241/344 (70.06%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPS-------------TNDFFSQFYQM 62
           MWMMGYND GDLNF +DSF  R+LRPL+PRPLSS S             TNDFFSQF+ M
Sbjct: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 63  G--TDQSKRELNNAPPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRR 122
              TDQ+KRELNNA PPPVVVSSRWNPTPEQLR+LEELYRRGTRTPSADQIQHITAQLRR
Sbjct: 61  ATVTDQTKRELNNA-PPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRR 120

Query: 123 FGKIEGKNVFYWFQNHKARERQKRRRQMES---SDQSICDIEILERKDSGSGRTVYEVEH 182
           +GKIEGKNVFYWFQNHKARERQKRRRQMES   +D S  +  ILERKDSGSGRTVYE E 
Sbjct: 121 YGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYE-EQ 180

Query: 183 TKNWPTSTNCRTLVEESLPIQR-------VPKDSTMTQN----GSLHSTAATPGGVGVGG 242
           TKNW  S+NC TL EES PIQ        V  D+    N     SLH   + P       
Sbjct: 181 TKNWAPSSNCTTLPEESAPIQGWIQFQGFVQNDTNNNNNNPPSSSLHFMHSPP---TTAL 240

Query: 243 IGGCRQLMMNTAPIAATTT-TATVTTIMHQ----------DDGVEGLEES---ETLQLFP 297
            GG  QLMMNTAPI  TTT TATVTTIMH            +GVE LEES   ETLQLFP
Sbjct: 241 DGGEAQLMMNTAPIPTTTTATATVTTIMHSKSHSNIGGFAPNGVEELEESEEAETLQLFP 300

[Close]

BLAST of Carg06627 vs. ExPASy TrEMBL
Match: A0A6J1E6X5 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.3e-96
Identity = 225/349 (64.47%), Postives = 241/349 (69.05%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPS-------------TNDFFSQFYQM 62
           MWMMGYND GDLNF +DSF  R+LRPL+PRPLSS S             TNDFFSQF+ M
Sbjct: 1   MWMMGYNDAGDLNFPTDSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 63  G--TDQSKRELNNAPPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRR 122
              TDQ+KRELNNA PPPVVVSSRWNPTPEQLR+LEELYRRGTRTPSADQIQHITAQLRR
Sbjct: 61  ATVTDQTKRELNNA-PPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRR 120

Query: 123 FGKIEGKNVFYWFQNHKARERQKRRRQMES---SDQSICDIEILERKDSGSGRTVYEVEH 182
           +GKIEGKNVFYWFQNHKARERQKRRRQMES   +D S  +  ILERKDSGSGRTVYE E 
Sbjct: 121 YGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAPEPGILERKDSGSGRTVYE-EQ 180

Query: 183 TKNWPTSTNCRTLVEESLPIQRVPKDST----------MTQN------GSLHSTAATPGG 242
           TKNW  S+NC TL EES PIQ  P   T          + QN       SLH   + P  
Sbjct: 181 TKNWAPSSNCTTLPEESAPIQPPPTPCTTHRGWIQFQSLVQNNNNPPSSSLHFMHSPP-- 240

Query: 243 VGVGGIGGCRQLMMNTAPIAATT-TTATVTTIMHQ----------DDGVEGLEES---ET 297
                 GG  QLMMNTAPI  TT  T+TVTTIMH            +GVE LEES   ET
Sbjct: 241 -TTALDGGGAQLMMNTAPIPTTTAATSTVTTIMHSKSHSNIGGFAPNGVEELEESEEAET 300

[Close]

BLAST of Carg06627 vs. ExPASy TrEMBL
Match: A0A0A0LVV6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.8e-93
Identity = 225/392 (57.40%), Postives = 247/392 (63.01%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSD-SFNARKLRPLIPRPLSSPS----TNDFFSQFYQMGT---DQS 62
           MWMMGYND  DLNF SD SFN+RKLRPLIPRPLSS S    TNDFFSQF+ M T   DQS
Sbjct: 1   MWMMGYNDAQDLNFPSDNSFNSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVADQS 60

Query: 63  KRELNN----APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 122
           KRELNN    +  PPVVVSSRWNPTPEQLR+LEELYRRGTRTPSADQIQHIT+QLRR+GK
Sbjct: 61  KRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGK 120

Query: 123 IEGKNVFYWFQNHKARERQKRRRQMESS-----DQSICDIEILERKDSGSGRTVYEVEHT 182
           IEGKNVFYWFQNHKARERQKRRRQMESS     D S  D+++LERKDSGSGRTVYE E T
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSTRDLDVLERKDSGSGRTVYE-EQT 180

Query: 183 KNWPTSTNCRTLVEESLPIQRVPKDSTM------TQNG-----SLH-------------- 242
           KNW  STNC TL EES+PIQ   K + M      T+NG      LH              
Sbjct: 181 KNWVPSTNCSTLPEESVPIQGAAKGNVMGATDCRTENGWIQFEELHQIRNNNTNTNNFAE 240

Query: 243 ------------STAATPGGV-------GVGGIGGCRQLMMNTAPIAATTTTATVTTIMH 297
                       +   +P  +           + G  QLMMN API   TTTATVTTIMH
Sbjct: 241 KDTNNIIINNNNNNINSPPSLQLLHCFPATAALRGGSQLMMNIAPI---TTTATVTTIMH 300

[Close]

BLAST of Carg06627 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 188.3 bits (477), Expect = 8.6e-48
Identity = 148/366 (40.44%), Postives = 181/366 (49.45%), Query Frame = 0


Query: 3   MWMMGYNDGGDLNFSSDSFN-ARKLRPLIPRPLSSP-------STNDFFSQFYQMGTDQS 62
           MW MGYN+GG     +DSFN  RKLRPLIPR  S P       S + F      M  +Q+
Sbjct: 1   MWTMGYNEGG-----ADSFNGGRKLRPLIPRLTSCPTAAVNTNSDHRFNMAVVTMTAEQN 60

Query: 63  KRE---LNNAPP-PPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 122
           KRE   LN+ P  PPV+VSSRWNPTP+QLR+LEELYR+GTRTPSAD IQ ITAQLRR+GK
Sbjct: 61  KRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGK 120

Query: 123 IEGKNVFYWFQNHKARERQKRRRQMES-------SDQSICDIEILERKDSGSGRTVYEVE 182
           IEGKNVFYWFQNHKARERQKRRRQME+       S  S+      ++KD       Y+VE
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDKKDPPG----YKVE 180

Query: 183 HTKNWPTSTNCRT-----------------LVEESLPIQRVPKDSTMTQNGSLHSTAATP 242
             KNW  S  C T                  VE +       + S +  N +       P
Sbjct: 181 QVKNWICSVGCDTQPEKPSRDYHLEEPANIRVEHNARCGGDERRSFLGINTTWQMMQLPP 240

Query: 243 GGVGVGGIGGCRQLMMNT-----------------------APIAATTTTATVTTIMHQ- 297
                      R L++N+                       +P+   T  AT T   H+ 
Sbjct: 241 SFYSSSHHHHQRNLILNSPTVSSNMSNSNNAVSASKDTVTVSPVFLRTREATNTETCHRN 300

[Close]

BLAST of Carg06627 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-24
Identity = 87/238 (36.55%), Postives = 117/238 (49.16%), Query Frame = 0


Query: 65  PVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHK 124
           P   + RWNPTPEQ+  LEELYR GTRTP+ +QIQ I ++LR++G+IEGKNVFYWFQNHK
Sbjct: 55  PAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHK 114

Query: 125 ARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPT--STNCRTLVEESL 184
           ARER KRRR+    +         + KDS SG   + V+ TK  P+   TN R   +  L
Sbjct: 115 ARERLKRRRR----EGGAIIKPHKDVKDSSSGG--HRVDQTKLCPSFPHTN-RPQPQHEL 174

Query: 185 PIQRVPKDSTMTQNGSLHSTAATPGGVGVGGIGGCRQLMMNTAPIAATTTTATVTTIMHQ 244
                 KD+         +  +      VG     R L+        T +       ++ 
Sbjct: 175 DPASYNKDNNANNEDHGTTEESDQRASEVGKYATWRNLV--------TWSITQQPEEINI 234

Query: 245 DDGVEGLEE----SETLQLFPLCSETRNGGCETVGSSGMNSANVMTPLQFFEFLPLKN 297
           D+ V G EE    + TL LFP+       G     +   N         ++EF+PLKN
Sbjct: 235 DENVNGEEEETRDNRTLNLFPVREYQEKTGRLIEKTKACNYC------YYYEFMPLKN 271

[Close]

BLAST of Carg06627 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-24
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 17  SSDSFNARKLRPLIPRPLSSP------------STNDFFSQFYQMGTDQSKRELNNAPPP 76
           SS S + ++LRPL P+   SP            +T D  +      T  +K E    PP 
Sbjct: 21  SSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTGPTKFEHKRDPPH 80

Query: 77  PVVV---SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQ 134
            +      +RWNPT EQ+ +LE LY+ G RTP+A QI+HIT QL ++GKIEGKNVFYWFQ
Sbjct: 81  QLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQ 140

[Close]

BLAST of Carg06627 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 69  SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARER 128
           SSRWNPT +Q+ LLE LY+ G RTPSADQIQ IT +LR +G IEGKNVFYWFQNHKAR+R
Sbjct: 12  SSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQR 71

Query: 129 QKRRRQ 135
           QK++++
Sbjct: 72  QKQKQE 77

[Close]

BLAST of Carg06627 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.7e-22
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 67  VVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKAR 126
           V S+RW PTPEQL +LEE+YR G RTP+A QIQ ITA L  +G+IEGKNVFYWFQNHKAR
Sbjct: 4   VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63

Query: 127 ERQKRRRQM 136
           +RQK R+++
Sbjct: 64  DRQKLRKKL 72

The following BLAST results are available for this feature:

BLAST of Carg06627 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012148.1	1.7e-167	100.00	WUSCHEL-related homeobox 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022955094.1	7.3e-166	98.99	WUSCHEL-related homeobox 1-like [Cucurbita moschata]	[more]
XP_023541174.1	2.9e-162	96.96	WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994694.1	7.8e-160	97.30	WUSCHEL-related homeobox 1-like [Cucurbita maxima]	[more]
KAG7019913.1	4.2e-97	64.47	WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Carg06627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K0	1.2e-46	40.44	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q9ZVF5	1.4e-23	36.55	WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2	[more]
Q6X7J9	1.9e-23	47.73	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]
Q25AM2	1.8e-21	46.55	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]
Q7XTV3	1.8e-21	46.55	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2...	[more]

BLAST of Carg06627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUZ2	3.5e-166	98.99	WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457162 PE...	[more]
A0A6J1K3K5	3.8e-160	97.30	WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490342 PE=3...	[more]
A0A6J1KJ87	4.5e-97	65.70	WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3...	[more]
A0A6J1E6X5	1.3e-96	64.47	WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE...	[more]
A0A0A0LVV6	1.8e-93	57.40	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE...	[more]

BLAST of Carg06627 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18010.1	8.6e-48	40.44	WUSCHEL related homeobox 1	[more]
AT2G01500.1	1.0e-24	36.55	Homeodomain-like superfamily protein	[more]
AT1G46480.1	1.3e-24	47.73	WUSCHEL related homeobox 4	[more]
AT5G59340.1	2.1e-22	71.21	WUSCHEL related homeobox 2	[more]
AT2G28610.1	4.7e-22	69.57	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 67..134 e-value: 1.9E-4 score: 30.8
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 70..129 e-value: 3.5E-19 score: 68.4
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 75..130 score: 10.948446
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 71..131 e-value: 8.74983E-7 score: 43.3861
None	No IPR available	GENE3D	1.10.10.60		coord: 54..145 e-value: 1.4E-9 score: 39.5
None	No IPR available	PANTHER	PTHR45940:SF13	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 33..296
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 33..296
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 69..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06627-RA	Carg06627-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity