Carg06414 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06414
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB114-like
Location	Carg_Chr14: 9573366 .. 9574173 (+)
RNA-Seq Expression	Carg06414
Synteny	Carg06414

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAAGAGGAGTCTGTGAAAAGAAAAGTGAGTCAAGTTGAAGGAGACATAAATGAGGCAGAAAATATGAGGAATGGCGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAGGTTATTGCCATTCATGGAGCAAAAAGGTGGAAGTCCATTGCAGCCGAAGCAGGTGCTGCTGCTCTTTCACTCCTTTCCTTTCATCTTGTATATTCCAACTCCAGAGATATGAGAAGTAAATTTGGTTTAATGGGTTTCTGAATTTTGCAGGTCTCAATCGGTGTGGGAAGAGTTGTAGACTAAGATGGCTGAATTATCTCAGACCTAACATTAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCATAAACTTCTTGGCAACAGGTCATGTTTTCTTGCCCGTTTCACTCTCCAATTTTCTCGCTTTGATTAACTTCAGTTTCGTAATCTGAAATGGAGTTTTGGTTTTCCGGGATGGGGTGGTACCTGATTGATTCTCTCAGGTGGTCTTTGATTGCTGGGAGACTGCCGGGAAGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAACTGAACCTACAGAGTGAAAGAGAAAGCGACATTCTCAAAAGAAAAGTGTGTAAAAGAAAAGTAGACACAGGGTCGAGAGAAGAGGAAACATCCCAAGAATGTGAAAATAGCTCGAACTTGGAGTATGATGTTGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTGTAA

mRNA sequence

ATGACTGAAGAGGAGTCTGTGAAAAGAAAAGTGAGTCAAGTTGAAGGAGACATAAATGAGGCAGAAAATATGAGGAATGGCGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAGGTTATTGCCATTCATGGAGCAAAAAGGTGGAAGTCCATTGCAGCCGAAGCAGGTCTCAATCGGTGTGGGAAGAGTTGTAGACTAAGATGGCTGAATTATCTCAGACCTAACATTAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCATAAACTTCTTGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCGGGAAGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAACTGAACCTACAGAGTGAAAGAGAAAGCGACATTCTCAAAAGAAAAGTGTGTAAAAGAAAAGTAGACACAGGGTCGAGAGAAGAGGAAACATCCCAAGAATGTGAAAATAGCTCGAACTTGGAGTATGATGTTGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTGTAA

Coding sequence (CDS)

ATGACTGAAGAGGAGTCTGTGAAAAGAAAAGTGAGTCAAGTTGAAGGAGACATAAATGAGGCAGAAAATATGAGGAATGGCGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAGGTTATTGCCATTCATGGAGCAAAAAGGTGGAAGTCCATTGCAGCCGAAGCAGGTCTCAATCGGTGTGGGAAGAGTTGTAGACTAAGATGGCTGAATTATCTCAGACCTAACATTAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCATAAACTTCTTGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCGGGAAGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAACTGAACCTACAGAGTGAAAGAGAAAGCGACATTCTCAAAAGAAAAGTGTGTAAAAGAAAAGTAGACACAGGGTCGAGAGAAGAGGAAACATCCCAAGAATGTGAAAATAGCTCGAACTTGGAGTATGATGTTGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTGTAA

Protein sequence

MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLFDFSNEGPDLEWMSKFL

Homology

[Close]

BLAST of Carg06414 vs. NCBI nr
Match: KAG6581815.1 (Transcription factor MYB4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018263.1 Transcription factor WER, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.0 bits (1011), Expect = 7.3e-106
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE
Sbjct: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF
Sbjct: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 196

[Close]

BLAST of Carg06414 vs. NCBI nr
Match: XP_022955558.1 (transcription factor MYB114-like [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 8.1e-105
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAA+
Sbjct: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKKLNLQSERESDIL RKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF
Sbjct: 121 IKNYWNSHLSKKLNLQSERESDILNRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 196

[Close]

BLAST of Carg06414 vs. NCBI nr
Match: XP_022980725.1 (transcription factor MYB114-like [Cucurbita maxima])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 193/196 (98.47%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVI+IHGAKRWKSIAA+
Sbjct: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVISIHGAKRWKSIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKKLNLQSE+ESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF
Sbjct: 121 IKNYWNSHLSKKLNLQSEKESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 196

[Close]

BLAST of Carg06414 vs. NCBI nr
Match: XP_023526052.1 (transcription factor MYB114-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 193/196 (98.47%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAA+
Sbjct: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKKLNLQSE+ESDILKRKVCKRKVDTGSREEETSQECENS+NLEYDVDNLF
Sbjct: 121 IKNYWNSHLSKKLNLQSEKESDILKRKVCKRKVDTGSREEETSQECENSTNLEYDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 196

[Close]

BLAST of Carg06414 vs. NCBI nr
Match: XP_038878481.1 (transcription factor MYB3-like [Benincasa hispida])

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 188/196 (95.92%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKV QVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAA+
Sbjct: 1   MTEEESVKRKVKQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKK+N QSE+ES+ILKRK CKRKVDT SREEETSQECENSSNLEYDVDNLF
Sbjct: 121 IKNYWNSHLSKKMNQQSEKESEILKRKGCKRKVDTESREEETSQECENSSNLEYDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 196

[Close]

BLAST of Carg06414 vs. ExPASy Swiss-Prot
Match: A0A4D6QCQ2 (Transcription factor MYB3 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB3 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.9e-44
Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 29  VNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNIS 88
           VN+G WTAEED+KL   ++ HG K+W+ + A+AGL RCGKSCRLRWLNYLRP IKRGNIS
Sbjct: 15  VNRGTWTAEEDEKLMNYVSAHGDKKWRMLPAKAGLKRCGKSCRLRWLNYLRPGIKRGNIS 74

Query: 89  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK 133
           + EEDLI+RLH LLGNRWS+IAGR+PGRTDNEIKN+WN+HLSK+
Sbjct: 75  EDEEDLIIRLHNLLGNRWSIIAGRIPGRTDNEIKNHWNTHLSKR 118

[Close]

BLAST of Carg06414 vs. ExPASy Swiss-Prot
Match: A0A4D6Q5I0 (Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.9e-44
Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 29  VNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNIS 88
           VN+G WTAEED+KL   ++ HG K+W+ + A+AGL RCGKSCRLRWLNYLRP IKRGNIS
Sbjct: 15  VNRGTWTAEEDEKLMNYVSAHGDKKWRMLPAKAGLKRCGKSCRLRWLNYLRPGIKRGNIS 74

Query: 89  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK 133
           + EEDLI+RLH LLGNRWS+IAGR+PGRTDNEIKN+WN+HLSK+
Sbjct: 75  EDEEDLIIRLHNLLGNRWSIIAGRIPGRTDNEIKNHWNTHLSKR 118

[Close]

BLAST of Carg06414 vs. ExPASy Swiss-Prot
Match: A0A2R6PN00 (Transcription factor MYB123 OS=Actinidia chinensis var. chinensis OX=1590841 GN=MYB123 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.2e-43
Identity = 80/114 (70.18%), Postives = 94/114 (82.46%), Query Frame = 0


Query: 28  GVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNI 87
           G+ +GAWTA ED+ L   I  HG  +W+++   AGL RCGKSCRLRWLNYLRP+IKRGNI
Sbjct: 11  GLIRGAWTAVEDRTLTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNI 70

Query: 88  SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNLQSERES 142
           S +EE+LI+RLHKLLGNRWSLIAGRLPGRTDNEIKNYWN+ L KK+  Q+ RES
Sbjct: 71  SHEEEELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKIRPQTSRES 124

[Close]

BLAST of Carg06414 vs. ExPASy Swiss-Prot
Match: A0A4D6Q4S0 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-42
Identity = 86/138 (62.32%), Postives = 109/138 (78.99%), Query Frame = 0


Query: 28  GVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNI 87
           G+N+GAW+A ED+ L + I  HG  +W+ +   AGL RCGKSCRLRWLNYLRP+IKRGNI
Sbjct: 11  GLNRGAWSAREDKVLKDYINTHGEGKWRDLPRRAGLKRCGKSCRLRWLNYLRPDIKRGNI 70

Query: 88  SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNLQSERESDILKRK 147
           S  EE+LI+RLHKLLGNRWSLIAGRLPGRTDNEIKNYWN++LSKK+N Q+  + +I   +
Sbjct: 71  SYDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLSKKVNSQT-HQHEIDGDQ 130

Query: 148 VCKRKVDTGSREEETSQE 166
           V  +K    ++EEE S++
Sbjct: 131 VPLKK----TKEEEVSEK 143

[Close]

BLAST of Carg06414 vs. ExPASy Swiss-Prot
Match: A0A4D6Q411 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-41
Identity = 76/112 (67.86%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 28  GVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNI 87
           G+N+GAW + ED+ L   I  HG  +W+S+   AGL RCGKSCRLRWLNYLRP IKRGNI
Sbjct: 11  GMNRGAWASMEDKILVTYIKTHGEGKWRSLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNI 70

Query: 88  SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNLQSER 140
           S+ EEDLI+RLH LLGNRWSLIAGRLPGRTDNEIKNYWN++L ++++ QS +
Sbjct: 71  SEDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGRRVHDQSHQ 122

[Close]

BLAST of Carg06414 vs. ExPASy TrEMBL
Match: A0A6J1GUA9 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111457538 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.9e-105
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAA+
Sbjct: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKKLNLQSERESDIL RKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF
Sbjct: 121 IKNYWNSHLSKKLNLQSERESDILNRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 196

[Close]

BLAST of Carg06414 vs. ExPASy TrEMBL
Match: A0A6J1IXC0 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111480008 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.1e-105
Identity = 193/196 (98.47%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVI+IHGAKRWKSIAA+
Sbjct: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVISIHGAKRWKSIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKKLNLQSE+ESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF
Sbjct: 121 IKNYWNSHLSKKLNLQSEKESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 196

[Close]

BLAST of Carg06414 vs. ExPASy TrEMBL
Match: A0A6J1DGZ8 (transcription factor MYB114-like OS=Momordica charantia OX=3673 GN=LOC111020984 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.7e-97
Identity = 181/196 (92.35%), Postives = 189/196 (96.43%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEEESVKRKV QVEGDINEAENMRN GVNKGAWTAEEDQKLAEVIAIHGAKRWK+IAA+
Sbjct: 1   MTEEESVKRKVKQVEGDINEAENMRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKK+N QSE+ES++LKRK CKRKVDT SREEETSQEC + SNLE+DVDNLF
Sbjct: 121 IKNYWNSHLSKKINQQSEKESEVLKRKGCKRKVDTESREEETSQECGDGSNLEFDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 195

[Close]

BLAST of Carg06414 vs. ExPASy TrEMBL
Match: A0A6J1G9A5 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111452140 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 180/196 (91.84%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEE+SVKRKV QVEGDINEAEN+RN GVNKGAWTAEEDQKLAEVIAIHGAKRWK+IAA+
Sbjct: 1   MTEEDSVKRKVKQVEGDINEAENVRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKK+N  SE+ESDILKRK CKRKVDT  REEETSQE E+SSNLE+DVDNLF
Sbjct: 121 IKNYWNSHLSKKMNQHSEKESDILKRKGCKRKVDTELREEETSQEFESSSNLEFDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 195

[Close]

BLAST of Carg06414 vs. ExPASy TrEMBL
Match: A0A6J1KET2 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111493205 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.8e-94
Identity = 179/196 (91.33%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MTEEESVKRKVSQVEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAE 60
           MTEE+SVKRKV QVEGDINEAEN+RN  VNKGAWTAEEDQKLAEVIAIHGAKRWK+IAA+
Sbjct: 1   MTEEDSVKRKVKQVEGDINEAENVRN-RVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAK 60

Query: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120
           AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 61  AGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 120

Query: 121 IKNYWNSHLSKKLNLQSERESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLF 180
           IKNYWNSHLSKK+N  SE+ESDILKRK CKRKVDT  REEETSQE E+SSNLE+DVDNLF
Sbjct: 121 IKNYWNSHLSKKMNQHSEKESDILKRKGCKRKVDTELREEETSQEFESSSNLEFDVDNLF 180

Query: 181 DFSNEGPDLEWMSKFL 197
           DFSNEGPDLEWMSKFL
Sbjct: 181 DFSNEGPDLEWMSKFL 195

[Close]

BLAST of Carg06414 vs. TAIR 10
Match: AT5G40330.1 (myb domain protein 23 )

HSP 1 Score: 168.3 bits (425), Expect = 6.1e-42
Identity = 73/105 (69.52%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 31  KGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNISDQ 90
           KG WT EED+ L + +  HG   W  IA + GL RCGKSCRLRW+NYL PN+ RGN +DQ
Sbjct: 14  KGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQ 73

Query: 91  EEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNL 136
           EEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN+HLSKKL L
Sbjct: 74  EEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGL 118

[Close]

BLAST of Carg06414 vs. TAIR 10
Match: AT4G34990.1 (myb domain protein 32 )

HSP 1 Score: 167.5 bits (423), Expect = 1.0e-41
Identity = 87/170 (51.18%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 30  NKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNISD 89
           NKGAWT EED KL   I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN + 
Sbjct: 13  NKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTL 72

Query: 90  QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNLQSERESDILKRKVC 149
           +E+DLI++LH LLGN+WSLIA RLPGRTDNEIKNYWN+H               +KRK+ 
Sbjct: 73  EEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTH---------------VKRKLL 132

Query: 150 KRKVDTGS----REEETSQECENSSNLEYDVDNLFDFSNEGPDLEWMSKF 196
           ++ +D  +     E +TSQ+  +SS  E   D L    + GP LE ++ F
Sbjct: 133 RKGIDPATHRPINETKTSQDSSDSSKTE---DPLVKILSFGPQLEKIANF 164

[Close]

BLAST of Carg06414 vs. TAIR 10
Match: AT3G13540.1 (myb domain protein 5 )

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-41
Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 28  GVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNI 87
           G+ +G WT EED+ L   I   G  RW+S+   AGL RCGKSCRLRW+NYLRP++KRG I
Sbjct: 22  GMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGI 81

Query: 88  SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 134
           +  EEDLILRLH+LLGNRWSLIAGR+PGRTDNEIKNYWN+HL KKL
Sbjct: 82  TSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKL 127

[Close]

BLAST of Carg06414 vs. TAIR 10
Match: AT4G09460.1 (myb domain protein 6 )

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-41
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 30  NKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRGNISD 89
           NKGAWT EEDQ+L + I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN +D
Sbjct: 13  NKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTD 72

Query: 90  QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 134
            E+ +I++LH LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +KL
Sbjct: 73  DEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of Carg06414 vs. TAIR 10
Match: AT5G14750.1 (myb domain protein 66 )

HSP 1 Score: 165.2 bits (417), Expect = 5.2e-41
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 26  NGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAEAGLNRCGKSCRLRWLNYLRPNIKRG 85
           N    KG WT EED+ L + +  HG   W  IA + GL RCGKSCRLRW+NYL PN+KRG
Sbjct: 13  NNEYKKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRG 72

Query: 86  NISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNLQSER----ES 145
           N ++QEEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN+HLSKKL ++ ++      
Sbjct: 73  NFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGIKDQKTKQSNG 132

Query: 146 DILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLFDFSN 185
           DI+ +       +T S E + S   +N++ L  ++      SN
Sbjct: 133 DIVYQINLPNPTET-SEETKISNIVDNNNILGDEIQEDHQGSN 174

The following BLAST results are available for this feature:

BLAST of Carg06414 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581815.1	7.3e-106	100.00	Transcription factor MYB4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022955558.1	8.1e-105	98.98	transcription factor MYB114-like [Cucurbita moschata]	[more]
XP_022980725.1	1.1e-104	98.47	transcription factor MYB114-like [Cucurbita maxima]	[more]
XP_023526052.1	1.1e-104	98.47	transcription factor MYB114-like [Cucurbita pepo subsp. pepo]	[more]
XP_038878481.1	1.9e-101	95.92	transcription factor MYB3-like [Benincasa hispida]	[more]

BLAST of Carg06414 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A4D6QCQ2	4.9e-44	74.04	Transcription factor MYB3 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB3 PE=2 ...	[more]
A0A4D6Q5I0	4.9e-44	74.04	Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 ...	[more]
A0A2R6PN00	9.2e-43	70.18	Transcription factor MYB123 OS=Actinidia chinensis var. chinensis OX=1590841 GN=...	[more]
A0A4D6Q4S0	1.6e-42	62.32	Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 ...	[more]
A0A4D6Q411	2.3e-41	67.86	Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 ...	[more]

BLAST of Carg06414 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUA9	3.9e-105	98.98	transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111457538 P...	[more]
A0A6J1IXC0	5.1e-105	98.47	transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111480008 PE=...	[more]
A0A6J1DGZ8	6.7e-97	92.35	transcription factor MYB114-like OS=Momordica charantia OX=3673 GN=LOC111020984 ...	[more]
A0A6J1G9A5	2.2e-95	91.84	transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111452140 P...	[more]
A0A6J1KET2	1.8e-94	91.33	transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111493205 PE=...	[more]

BLAST of Carg06414 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40330.1	6.1e-42	69.52	myb domain protein 23	[more]
AT4G34990.1	1.0e-41	51.18	myb domain protein 32	[more]
AT3G13540.1	2.3e-41	69.81	myb domain protein 5	[more]
AT4G09460.1	2.3e-41	68.27	myb domain protein 6	[more]
AT5G14750.1	5.2e-41	50.92	myb domain protein 66	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	COILS	Coil	Coil	coord: 195..196
None	No IPR available	GENE3D	1.10.10.60		coord: 31..83 e-value: 9.1E-20 score: 72.3
None	No IPR available	GENE3D	1.10.10.60		coord: 88..171 e-value: 1.3E-20 score: 75.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR47999:SF46	TRANSCRIPTION FACTOR WER-LIKE ISOFORM X1	coord: 21..196
None	No IPR available	PANTHER	PTHR47999	TRANSCRIPTION FACTOR MYB8-RELATED-RELATED	coord: 21..196
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 30..80 e-value: 4.0E-17 score: 72.9 coord: 83..131 e-value: 1.9E-15 score: 67.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 26..78 score: 11.625421
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 79..129 score: 10.313219
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 33..78 e-value: 7.26675E-12 score: 56.0446
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 88..129 e-value: 1.04199E-9 score: 50.2666
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 31..78 e-value: 3.5E-19 score: 68.7 coord: 84..129 e-value: 1.1E-13 score: 51.1
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 26..82 score: 25.948107
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 83..133 score: 22.444963
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 29..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06414-RA	Carg06414-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding