Carg06383 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06383
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	auxin-responsive protein SAUR50-like
Location	Carg_Chr14: 9421412 .. 9421765 (-)
RNA-Seq Expression	Carg06383
Synteny	Carg06383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGCTCGGCAAGCTGACGAAGCTCAAATCCGCCATCAAACGCTGGCCATCCATCTCAAAACTCTCCCGCACCACCACCTCCTCTGCAGTCTCCGCCGCCGCCCTCGACGAAGACCACAATCTCCACCCAGTCTTCGTGGGCAGGTCCCGTCGCCGGTACCTCCTCTCCTCGGACGTTGTCCAGCACCCACTCTTCCAGGAGGTGGTGGACAAATCTTCCCCCAATTCCGATGAAGAGGGTGTTGTTGTGTCGTGCGAGGTTGTCCTGTTCGAGCACTTGCTGTGGATGCTGGAAAATGCAGACACCCAATTGGGGTCCGCCGATGAACTTGTCCAATTCTACACTTAG

mRNA sequence

ATGGCCAAGCTCGGCAAGCTGACGAAGCTCAAATCCGCCATCAAACGCTGGCCATCCATCTCAAAACTCTCCCGCACCACCACCTCCTCTGCAGTCTCCGCCGCCGCCCTCGACGAAGACCACAATCTCCACCCAGTCTTCGTGGGCAGGTCCCGTCGCCGGTACCTCCTCTCCTCGGACGTTGTCCAGCACCCACTCTTCCAGGAGGTGGTGGACAAATCTTCCCCCAATTCCGATGAAGAGGGTGTTGTTGTGTCGTGCGAGGTTGTCCTGTTCGAGCACTTGCTGTGGATGCTGGAAAATGCAGACACCCAATTGGGGTCCGCCGATGAACTTGTCCAATTCTACACTTAG

Coding sequence (CDS)

ATGGCCAAGCTCGGCAAGCTGACGAAGCTCAAATCCGCCATCAAACGCTGGCCATCCATCTCAAAACTCTCCCGCACCACCACCTCCTCTGCAGTCTCCGCCGCCGCCCTCGACGAAGACCACAATCTCCACCCAGTCTTCGTGGGCAGGTCCCGTCGCCGGTACCTCCTCTCCTCGGACGTTGTCCAGCACCCACTCTTCCAGGAGGTGGTGGACAAATCTTCCCCCAATTCCGATGAAGAGGGTGTTGTTGTGTCGTGCGAGGTTGTCCTGTTCGAGCACTTGCTGTGGATGCTGGAAAATGCAGACACCCAATTGGGGTCCGCCGATGAACTTGTCCAATTCTACACTTAG

Protein sequence

MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT

Homology

[Close]

BLAST of Carg06383 vs. NCBI nr
Match: KAG6581780.1 (Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018233.1 hypothetical protein SDJN02_20101, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.3 bits (586), Expect = 8.4e-57
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60
           MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60

Query: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 118
           VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT
Sbjct: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Carg06383 vs. NCBI nr
Match: XP_022955880.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_023527039.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60
           MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVS+AALDEDHNLHPVFVGRSRRRYLLSSD
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSD 60

Query: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 118
           VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT
Sbjct: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Carg06383 vs. NCBI nr
Match: XP_022980757.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60
           MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVS+AALDEDHNLHPVFVGRSRRRYLLSSD
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSD 60

Query: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 118
           VVQHPLFQEVV+KSSPNSDE+GVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT
Sbjct: 61  VVQHPLFQEVVEKSSPNSDEQGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Carg06383 vs. NCBI nr
Match: XP_016902534.1 (PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo] >KAA0053538.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa] >TYK19130.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47
Identity = 108/127 (85.04%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSAAALDED-----HNLHPVFVGRS 60
           MAKLGKLTKLKSAIKRWPSISKLSRT T    SSAVS+A LD D     H+LHPVFVGRS
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTPTSSSSSSAVSSATLDNDNDNDNHHLHPVFVGRS 60

Query: 61  RRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVVLFEHLLWMLENADTQLGSAD 118
           RRRYLLSSDVV HPLFQE+VDKSSPNS+EE G+VVSCEVVLFEHLLWMLENADTQLGSAD
Sbjct: 61  RRRYLLSSDVVHHPLFQELVDKSSPNSEEEQGLVVSCEVVLFEHLLWMLENADTQLGSAD 120

[Close]

BLAST of Carg06383 vs. NCBI nr
Match: XP_011651720.1 (auxin-responsive protein SAUR78 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-47
Identity = 105/125 (84.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTT---SSAVSAAALDED-----HNLHPVFVGRSR 60
           MAKLGKLTKLKSAIKRWPSISKLSR TT   SSAVS A LD D     H+LHPVFVGRSR
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRATTPTSSSAVSNATLDNDNHNHNHHLHPVFVGRSR 60

Query: 61  RRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADEL 118
           RRYLLSSDVV HPLFQE+VDKSSPNS+E+G+V+SCEVVLFEHLLWMLENA TQLGSADEL
Sbjct: 61  RRYLLSSDVVHHPLFQELVDKSSPNSEEQGLVISCEVVLFEHLLWMLENAATQLGSADEL 120

[Close]

BLAST of Carg06383 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.2e-31
Identity = 69/119 (57.98%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60
           MAK+GKLTKLKSA+K+WPS +K    +TSSA  +  L ED+NLH V+VG++RR Y+L  D
Sbjct: 1   MAKVGKLTKLKSAMKKWPSFAKNHHHSTSSAAVSDELSEDNNLHVVYVGQTRRPYMLRPD 60

Query: 61  VVQHPLFQEVVDKSSPNSDEEG--VVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 118
           ++ HPLFQE+VD+SS  S E+   +VV+CEVVLFEHLLWML++   + GS +EL +FYT
Sbjct: 61  IISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLKSGQ-EGGSVEELAEFYT 118

[Close]

BLAST of Carg06383 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.9e-28
Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISK---LSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLL 60
           MA  GKLTKLKSAIK+WPS++K    +  T S+AVS  +  ED  LH V+VG+SRR Y+L
Sbjct: 1   MAIFGKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKCED--LHVVYVGKSRRPYML 60

Query: 61  SSDVVQHPLFQEVVDKSS----PNSDEEGVVVSCEVVLFEHLLWMLENA--------DTQ 118
           SS V+ HPLFQE++D+SS       D+E V+V+CEVVLFEHLLWML+N+        D +
Sbjct: 61  SSHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRE 120

[Close]

BLAST of Carg06383 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-18
Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 1   MAKLG-KLTKLKSAIKRWPSI----SKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRY 60
           MAK G KL KLKS +K+  S     ++    T  S  SA +     +L  V+VGR+RR Y
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNTKPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRRTY 60

Query: 61  LLSSDVVQHPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEHLLWMLENAD---TQLGSADE 117
            +SSDVV HPLFQ++         E+G + VSCEVVLFEHLLWMLENAD   ++  S  E
Sbjct: 61  HVSSDVVSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESVYE 120

[Close]

BLAST of Carg06383 vs. ExPASy TrEMBL
Match: A0A6J1GWA8 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111457732 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.0e-57
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60
           MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVS+AALDEDHNLHPVFVGRSRRRYLLSSD
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSD 60

Query: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 118
           VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT
Sbjct: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Carg06383 vs. ExPASy TrEMBL
Match: A0A6J1IS54 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480030 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.8e-56
Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60
           MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVS+AALDEDHNLHPVFVGRSRRRYLLSSD
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSD 60

Query: 61  VVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 118
           VVQHPLFQEVV+KSSPNSDE+GVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT
Sbjct: 61  VVQHPLFQEVVEKSSPNSDEQGVVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 117

[Close]

BLAST of Carg06383 vs. ExPASy TrEMBL
Match: A0A5D3D6I8 (Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00520 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 108/127 (85.04%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSAAALDED-----HNLHPVFVGRS 60
           MAKLGKLTKLKSAIKRWPSISKLSRT T    SSAVS+A LD D     H+LHPVFVGRS
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTPTSSSSSSAVSSATLDNDNDNDNHHLHPVFVGRS 60

Query: 61  RRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVVLFEHLLWMLENADTQLGSAD 118
           RRRYLLSSDVV HPLFQE+VDKSSPNS+EE G+VVSCEVVLFEHLLWMLENADTQLGSAD
Sbjct: 61  RRRYLLSSDVVHHPLFQELVDKSSPNSEEEQGLVVSCEVVLFEHLLWMLENADTQLGSAD 120

[Close]

BLAST of Carg06383 vs. ExPASy TrEMBL
Match: A0A1S4E2S4 (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103499187 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 108/127 (85.04%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSAAALDED-----HNLHPVFVGRS 60
           MAKLGKLTKLKSAIKRWPSISKLSRT T    SSAVS+A LD D     H+LHPVFVGRS
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRTPTSSSSSSAVSSATLDNDNDNDNHHLHPVFVGRS 60

Query: 61  RRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVVLFEHLLWMLENADTQLGSAD 118
           RRRYLLSSDVV HPLFQE+VDKSSPNS+EE G+VVSCEVVLFEHLLWMLENADTQLGSAD
Sbjct: 61  RRRYLLSSDVVHHPLFQELVDKSSPNSEEEQGLVVSCEVVLFEHLLWMLENADTQLGSAD 120

[Close]

BLAST of Carg06383 vs. ExPASy TrEMBL
Match: A0A0A0LBZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646510 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 105/125 (84.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTT---SSAVSAAALDED-----HNLHPVFVGRSR 60
           MAKLGKLTKLKSAIKRWPSISKLSR TT   SSAVS A LD D     H+LHPVFVGRSR
Sbjct: 1   MAKLGKLTKLKSAIKRWPSISKLSRATTPTSSSAVSNATLDNDNHNHNHHLHPVFVGRSR 60

Query: 61  RRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSADEL 118
           RRYLLSSDVV HPLFQE+VDKSSPNS+E+G+V+SCEVVLFEHLLWMLENA TQLGSADEL
Sbjct: 61  RRYLLSSDVVHHPLFQELVDKSSPNSEEQGLVISCEVVLFEHLLWMLENAATQLGSADEL 120

[Close]

BLAST of Carg06383 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32
Identity = 69/119 (57.98%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLLSSD 60
           MAK+GKLTKLKSA+K+WPS +K    +TSSA  +  L ED+NLH V+VG++RR Y+L  D
Sbjct: 1   MAKVGKLTKLKSAMKKWPSFAKNHHHSTSSAAVSDELSEDNNLHVVYVGQTRRPYMLRPD 60

Query: 61  VVQHPLFQEVVDKSSPNSDEEG--VVVSCEVVLFEHLLWMLENADTQLGSADELVQFYT 118
           ++ HPLFQE+VD+SS  S E+   +VV+CEVVLFEHLLWML++   + GS +EL +FYT
Sbjct: 61  IISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLKSGQ-EGGSVEELAEFYT 118

[Close]

BLAST of Carg06383 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 2.1e-29
Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 1   MAKLGKLTKLKSAIKRWPSISK---LSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRYLL 60
           MA  GKLTKLKSAIK+WPS++K    +  T S+AVS  +  ED  LH V+VG+SRR Y+L
Sbjct: 1   MAIFGKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKCED--LHVVYVGKSRRPYML 60

Query: 61  SSDVVQHPLFQEVVDKSS----PNSDEEGVVVSCEVVLFEHLLWMLENA--------DTQ 118
           SS V+ HPLFQE++D+SS       D+E V+V+CEVVLFEHLLWML+N+        D +
Sbjct: 61  SSHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRE 120

[Close]

BLAST of Carg06383 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-19
Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 1   MAKLG-KLTKLKSAIKRWPSI----SKLSRTTTSSAVSAAALDEDHNLHPVFVGRSRRRY 60
           MAK G KL KLKS +K+  S     ++    T  S  SA +     +L  V+VGR+RR Y
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNTKPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRRTY 60

Query: 61  LLSSDVVQHPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEHLLWMLENAD---TQLGSADE 117
            +SSDVV HPLFQ++         E+G + VSCEVVLFEHLLWMLENAD   ++  S  E
Sbjct: 61  HVSSDVVSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESVYE 120

[Close]

BLAST of Carg06383 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 61.6 bits (148), Expect = 4.8e-10
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 46  VFVGRSRRRYLLSSDVVQHPLFQEVVDKS---SPNSDEEG---VVVSCEVVLFEHLLWML 105
           V VGR+++ YL+S   ++HPL   +V+K      + +E+G   + V CEVVLF+HLLWML
Sbjct: 58  VLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEEDDNEDGSCIITVKCEVVLFDHLLWML 117

Query: 106 ENADTQ--LGSADELVQFY 117
           E  D    L S D+    Y
Sbjct: 118 EYGDEVHILESLDDFAHLY 136

[Close]

BLAST of Carg06383 vs. TAIR 10
Match: AT1G16510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04
Identity = 24/83 (28.92%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 45  PVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSD--EEGVV-VSCEVVLFEHLLWM--- 104
           PV+VG    R+++S++++ HP+F  ++++S+      ++GV+ + C V++FE ++     
Sbjct: 60  PVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETLRL 119

Query: 105 --------LENADTQLGSADELV 114
                   LEN    L S DEL+
Sbjct: 120 GGFEGSGDLENLVASLLSGDELI 142

The following BLAST results are available for this feature:

BLAST of Carg06383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581780.1	8.4e-57	100.00	Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022955880.1	1.9e-56	99.15	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_023527039.1 auxin-...	[more]
XP_022980757.1	1.2e-55	97.44	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_016902534.1	2.1e-47	85.04	PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo] >KAA0053538.1 aux...	[more]
XP_011651720.1	2.7e-47	84.00	auxin-responsive protein SAUR78 [Cucumis sativus]	[more]

BLAST of Carg06383 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9E1	2.2e-31	57.98	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q9LQI6	2.9e-28	54.55	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q29PU2	3.6e-18	48.80	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of Carg06383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWA8	9.0e-57	99.15	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]
A0A6J1IS54	5.8e-56	97.44	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480030...	[more]
A0A5D3D6I8	1.0e-47	85.04	Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4E2S4	1.0e-47	85.04	auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103499187 PE=...	[more]
A0A0A0LBZ7	1.3e-47	84.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646510 PE=3 SV=1	[more]

BLAST of Carg06383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72430.1	1.5e-32	57.98	SAUR-like auxin-responsive protein family	[more]
AT1G17345.1	2.1e-29	54.55	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	2.5e-19	48.80	SAUR-like auxin-responsive protein family	[more]
AT3G12955.1	4.8e-10	41.77	SAUR-like auxin-responsive protein family	[more]
AT1G16510.1	1.8e-04	28.92	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..99 e-value: 6.4E-15 score: 55.1
None	No IPR available	PANTHER	PTHR31374:SF5	AUXIN-RESPONSIVE PROTEIN SAUR78	coord: 4..117
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 4..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06383-RA	Carg06383-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin