Carg06278 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCAACAGACGTTGATCTACAGTTTTGTGGCTCGAGGAACGGTGATCATCGCCGAGTATACGGGTTTCAGCGGAAATTTCACTAGCATCGCCTCTCAATGCCTCCAGAAGCTCCCTGCTTCCAACAATAAGTTCACCTACAATTGCGATGGCCACACCTTCAATTATCTCGTCGAGAATGGATTCAGTACGTTTCGTTTTATTGAATTTATGTTGCATTTTTTTCTGATCCTGATCTCATCATGATTCGTTCGTTATTTTTGTTGAGCTTTTCCATGCGAGATCCATTTTTGGTTTTACAATGTCGTATGTCATTGTTACAGATCCGTCGATTTTTACCTTACGAAGGCTTGTTCATTAGTGCGTTGGTTAATTATAGCTCATGATATCTCTTGAATCGCATTAGGTTTCGACATCTTGCTTCTCTTGAATTGGTGGACGTTTTCGTTGAGTTCAACGAGAATTGAAGTTTGCTTATAAACATTAAATAGGTGGCTATAAACCAACCAAATGATTTGAGATTTTTCATAAAAAAAATTGAATTCGTGTTTTTGGTTACCTTGAGAGAGAAAGGAGCACGAGATCAATGTGGAAGCAGTAATATCATGCAACATGCGACCGGAGGCACAATGCATTGCTTAGAATCCAGGTTGATCTAACCTGAAAAGAAAAATACCGAATCGGAAATGGAGGTATCAGCTACCAACACGAAGAGCCTGGCATTGCTTTATTCGTTGAATTTTCTGAATTCCTTCCATTTTCCTTTTCTGAATTTCCTCGAATATTTAGCTATGGTTGAGGGTAGTAGCCTGGTAGTTACGTGGATGCATAATCTCCTTTACAGCCAATCATCAAGTTCTCTCGTGATTCAATTTTCATCCAACTTTCTGTTCCATTTTTCTTGGCACATCGATTTCATTTGTTTTTTTTCTTAATCGTGCTCTAAACATGTCATATTGTAAAAGTTTGTGTGAGAATGTGATTTAACTAGCCCAATTCAAACGTGAATCTGCAGCTTACTGTGTGGTTGCTATCGAAGCTGCTGGTAGACAAATTCCTATTGCTTTTCTTGAGCGAGTCAAGGAAGATTTCAACAAGAGATATGGTGGCGGAAAAGCTTCAACTGCTGCTGCTAAGAGTCTGAACAAAGAATTTGGGTACTGTTTCCAATGCCCTGTTATTAAATATATATCTAGAAATATTTTATCTAACTAGAGAAATAGTTGGCTAGGAATCATGAACTTCCACGATGGTAAGATAGTATCCACTTTAAACATAAGCTCGAGGCCTTGCTTTAGACTTTCCCAAAAGGCCCAATACCAATGGGAAATGTATTCCTTACTTATAAACTCACGATCATTTTCTAGATTAGTCTGGGACTTGCTCCCAACAATCCTCAACCATCCTCCCCTCGAATAAAGTATATCATAGAACTTCCCCTGAGGTCAGGGGAGCCCTCGAACATAGTTAACATAGACAATAAGATGCATAAGATAATGCAACAAACAAAAGCAAAAAAAAAAAGTAAAATTAAAAAATCTAGAGTCTTGCATTCTTAATGGTACCAGGAATTGAAGTTGTATTTTTCCCACGGCTTTCAGATAGCATTGGTAACTGATGTGTTCTTGTTTGTTGGAACAACCTTCAAAACTCATTTATAAACTAATTTCCATAGGTCCAAATTGAAGGAGCATATGCAATATTGTGTGGATCATCCTGAAGAGATCAGTAAGCTTGCTAAAGTTAAGGCTCAGGTTTCTGAAGTCAAGGGTGTTATGATGGAAAACATTGAGAAGGTAAAAAGGAGCAACAATGTTTTGACGAGTTTGTTACCAACATAGTTTCAATCCTGCCAATCAAAACTCTCTTAATTTCTTACTTCTGGATGATATTTTGTGGAACTAATTTGTTTTTTTTGTTAATGATTTACTTCTGGATGATATTTTAATCTTGAAAGAACTATTTTTCTATCTGTTTGGCAGGTTCTTGACCGTGGTGAGAAAATTGAGCTGTTAGTGGATAAAACTGAGAATCTCCGCTCACAGGTTGGTTTTAAAAAATTTCTTTTTTGAAGTCAATAATGTAAATTCATACCGCTTGATCATATTATTAATTAGTCTCCATCTCTCCCGGGCAGTGGCATTCCGGTAAATACCGTTGCCATGTTTAGGGGCAACCTCTGAGTTCATGTCCATTGCATTTGTTCATCTGTCATCGTCAAATGCATTGTTTTGAGTACCCAGTAAGAAAAGTAACTGATTTGGGAGTAATATTATGTTAAAATCACTCTTACTTGCATTTTAAATCATTCCAAAATATGCTTTTTAATCTATTAAAAAGGTATGAACGTTTCTTGTCTGATCGTGAACTCCATAGAAATTATCCTTTTAATATTGCAAAATACAATCCCAACGTAAATCGCAATCAACTCGATGCACTTTATTGGATTCTTAACAAGCTGGAAATATTCAAGATCAATAGGAGCTATTTGATTCTATATCGATTTGTCGATAATATCTATCTAAGGTATACTCAAGCGTTCAAAAGTGTTTTTGGACTAATTTTAAATATCGCTGTCGGAATACTTATTTTTCATACCTGGATGAAATGTTTGCTCGACATGCATCATAAGTTGATGAATTCAATGGTTGTTTCGATTTCAGGCACAGGATTTCAGGACACAAGGAACTAAGATGAAAAGAAAGATGTGGTACCAAAACATGAAGATGAAATTGATCGTGTTCGGAATTGTGTTGGCCTTAATTCTCATAATTATATTGTCCATCTGTCACGGTTTCAACTGTTGAGTTCCCATCATCTCGATGCATAATTGGACGATGTCGGTGGTAGAGGTTAGATTCACGCACCCAACTTTGCAGATCTTTGAATTTGGCGTCTTCAATTCCTTCTTCTACGTTGGTTAGTTGTAACCCCCAATTCCCTTCCCTCTTCTGCTACAATATAATAATAATAATACCCTTTTAGGATGCGGGGAGGAGGCTCTGTAATTTGGACTGCTGTATATCTATATATATCTATATATATCT ATGGTGCAACAGACGTTGATCTACAGTTTTGTGGCTCGAGGAACGGTGATCATCGCCGAGTATACGGGTTTCAGCGGAAATTTCACTAGCATCGCCTCTCAATGCCTCCAGAAGCTCCCTGCTTCCAACAATAAGTTCACCTACAATTGCGATGGCCACACCTTCAATTATCTCGTCGAGAATGGATTCACTTACTGTGTGGTTGCTATCGAAGCTGCTGGTAGACAAATTCCTATTGCTTTTCTTGAGCGAGTCAAGGAAGATTTCAACAAGAGATATGGTGGCGGAAAAGCTTCAACTGCTGCTGCTAAGAAGATCAGTAAGCTTGCTAAAGTTAAGGCTCAGGTTTCTGAAGTCAAGGGTGTTATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAAATTGAGCTGTTAGTGGATAAAACTGAGAATCTCCGCTCACAGGCACAGGATTTCAGGACACAAGGAACTAAGATGAAAAGAAAGATGTGGTACCAAAACATGAAGATGAAATTGATCGTGTTCGGAATTGTGTTGGCCTTAATTCTCATAATTATATTGTCCATCTGTCACGGTTTCAACTGTTGAGTTCCCATCATCTCGATGCATAATTGGACGATGTCGGTGGTAGAGGTTAGATTCACGCACCCAACTTTGCAGATCTTTGAATTTGGCGTCTTCAATTCCTTCTTCTACGTTGGTTAGTTGTAACCCCCAATTCCCTTCCCTCTTCTGCTACAATATAATAATAATAATACCCTTTTAGGATGCGGGGAGGAGGCTCTGTAATTTGGACTGCTGTATATCTATATATATCTATATATATCT ATGGTGCAACAGACGTTGATCTACAGTTTTGTGGCTCGAGGAACGGTGATCATCGCCGAGTATACGGGTTTCAGCGGAAATTTCACTAGCATCGCCTCTCAATGCCTCCAGAAGCTCCCTGCTTCCAACAATAAGTTCACCTACAATTGCGATGGCCACACCTTCAATTATCTCGTCGAGAATGGATTCACTTACTGTGTGGTTGCTATCGAAGCTGCTGGTAGACAAATTCCTATTGCTTTTCTTGAGCGAGTCAAGGAAGATTTCAACAAGAGATATGGTGGCGGAAAAGCTTCAACTGCTGCTGCTAAGAAGATCAGTAAGCTTGCTAAAGTTAAGGCTCAGGTTTCTGAAGTCAAGGGTGTTATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAAATTGAGCTGTTAGTGGATAAAACTGAGAATCTCCGCTCACAGGCACAGGATTTCAGGACACAAGGAACTAAGATGAAAAGAAAGATGTGGTACCAAAACATGAAGATGAAATTGATCGTGTTCGGAATTGTGTTGGCCTTAATTCTCATAATTATATTGTCCATCTGTCACGGTTTCAACTGTTGA MVQQTLIYSFVARGTVIIAEYTGFSGNFTSIASQCLQKLPASNNKFTYNCDGHTFNYLVENGFTYCVVAIEAAGRQIPIAFLERVKEDFNKRYGGGKASTAAAKKISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKMWYQNMKMKLIVFGIVLALILIIILSICHGFNC Homology
BLAST of Carg06278 vs. NCBI nr
Match: KAG7028772.1 (putative vesicle-associated membrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377.9 bits (969), Expect = 5.5e-101 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg06278 vs. NCBI nr
Match: XP_022937249.1 (putative vesicle-associated membrane protein 726 [Cucurbita moschata] >XP_022937258.1 putative vesicle-associated membrane protein 726 [Cucurbita moschata] >XP_022974893.1 putative vesicle-associated membrane protein 726 [Cucurbita maxima] >XP_022974894.1 putative vesicle-associated membrane protein 726 [Cucurbita maxima] >XP_022974895.1 putative vesicle-associated membrane protein 726 [Cucurbita maxima] >XP_022974896.1 putative vesicle-associated membrane protein 726 [Cucurbita maxima] >XP_022974897.1 putative vesicle-associated membrane protein 726 [Cucurbita maxima] >KAG6597305.1 putative vesicle-associated membrane protein 726, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96 Identity = 196/219 (89.50%), Postives = 197/219 (89.95%), Query Frame = 0
BLAST of Carg06278 vs. NCBI nr
Match: XP_023540193.1 (putative vesicle-associated membrane protein 726 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96 Identity = 196/219 (89.50%), Postives = 197/219 (89.95%), Query Frame = 0
BLAST of Carg06278 vs. NCBI nr
Match: XP_038880399.1 (putative vesicle-associated membrane protein 726 [Benincasa hispida]) HSP 1 Score: 342.4 bits (877), Expect = 2.5e-90 Identity = 182/219 (83.11%), Postives = 193/219 (88.13%), Query Frame = 0
BLAST of Carg06278 vs. NCBI nr
Match: XP_008438380.1 (PREDICTED: putative vesicle-associated membrane protein 726 [Cucumis melo]) HSP 1 Score: 340.9 bits (873), Expect = 7.4e-90 Identity = 180/219 (82.19%), Postives = 192/219 (87.67%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy Swiss-Prot
Match: Q9MAS5 (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana OX=3702 GN=VAMP726 PE=2 SV=2) HSP 1 Score: 329.3 bits (843), Expect = 2.9e-89 Identity = 171/219 (78.08%), Postives = 190/219 (86.76%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy Swiss-Prot
Match: P47192 (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana OX=3702 GN=VAMP722 PE=2 SV=2) HSP 1 Score: 325.9 bits (834), Expect = 3.2e-88 Identity = 171/219 (78.08%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy Swiss-Prot
Match: Q9ZTW3 (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana OX=3702 GN=VAMP721 PE=2 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.3e-86 Identity = 166/219 (75.80%), Postives = 186/219 (84.93%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy Swiss-Prot
Match: O48850 (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana OX=3702 GN=VAMP725 PE=2 SV=2) HSP 1 Score: 319.3 bits (817), Expect = 3.0e-86 Identity = 166/219 (75.80%), Postives = 185/219 (84.47%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy Swiss-Prot
Match: O23429 (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana OX=3702 GN=VAMP724 PE=2 SV=2) HSP 1 Score: 268.1 bits (684), Expect = 8.0e-71 Identity = 139/220 (63.18%), Postives = 173/220 (78.64%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy TrEMBL
Match: A0A6J1IBI4 (putative vesicle-associated membrane protein 726 OS=Cucurbita maxima OX=3661 GN=LOC111473659 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 5.2e-97 Identity = 196/219 (89.50%), Postives = 197/219 (89.95%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy TrEMBL
Match: A0A6J1FFM5 (putative vesicle-associated membrane protein 726 OS=Cucurbita moschata OX=3662 GN=LOC111443592 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 5.2e-97 Identity = 196/219 (89.50%), Postives = 197/219 (89.95%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy TrEMBL
Match: A0A1S3AWB6 (putative vesicle-associated membrane protein 726 OS=Cucumis melo OX=3656 GN=LOC103483496 PE=3 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90 Identity = 180/219 (82.19%), Postives = 192/219 (87.67%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy TrEMBL
Match: A0A0A0L449 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132570 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 8.0e-90 Identity = 180/219 (82.19%), Postives = 192/219 (87.67%), Query Frame = 0
BLAST of Carg06278 vs. ExPASy TrEMBL
Match: A0A6J1EA64 (putative vesicle-associated membrane protein 726 OS=Cucurbita moschata OX=3662 GN=LOC111432118 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.3e-89 Identity = 178/219 (81.28%), Postives = 192/219 (87.67%), Query Frame = 0
BLAST of Carg06278 vs. TAIR 10
Match: AT1G04760.1 (vesicle-associated membrane protein 726 ) HSP 1 Score: 329.3 bits (843), Expect = 2.1e-90 Identity = 171/219 (78.08%), Postives = 190/219 (86.76%), Query Frame = 0
BLAST of Carg06278 vs. TAIR 10
Match: AT2G33120.1 (synaptobrevin-related protein 1 ) HSP 1 Score: 325.9 bits (834), Expect = 2.3e-89 Identity = 171/219 (78.08%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of Carg06278 vs. TAIR 10
Match: AT1G04750.1 (vesicle-associated membrane protein 721 ) HSP 1 Score: 319.7 bits (818), Expect = 1.6e-87 Identity = 166/219 (75.80%), Postives = 186/219 (84.93%), Query Frame = 0
BLAST of Carg06278 vs. TAIR 10
Match: AT2G32670.1 (vesicle-associated membrane protein 725 ) HSP 1 Score: 319.3 bits (817), Expect = 2.1e-87 Identity = 166/219 (75.80%), Postives = 185/219 (84.47%), Query Frame = 0
BLAST of Carg06278 vs. TAIR 10
Match: AT2G33120.2 (synaptobrevin-related protein 1 ) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-86 Identity = 170/227 (74.89%), Postives = 188/227 (82.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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