Carg06246 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg06246
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr06: 8331654 .. 8334151 (-)
RNA-Seq ExpressionCarg06246
SyntenyCarg06246
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGACTTATTCGATTCAGACCCAATACCACCACGAGCGCCACCCCTGGCAGCGGCAACGGTGGCGGCGGCGGGGAAGTCAGATCCTCGCATCATCCATGCCCAAGCCATCAAATCTCCGGCCACCGATCGTTCTGTTTACAACAATCTGATAACTCTCTACGGCAAAGCAAACTTGCTGCACTATTCCGTTCGTCTTTTCGACCAAATCCCATTGCCCAATGTTGTGTCTTGGACTGCACTCATCTCTGCTCATTCCAACACGTTTCTAGCTCTTCGCCATTTTGTTTCTATGCTCCGATACCCATCTTTCCCTAACCAACGGACATTAGCTTCTCTTTTCAAGACCTGCGCTTCGCTCCCTTGCGTCTCTTTTGGGCTTTCCCTTCACTCCCTTGCACACAAACTCTCACTCTGCAGTGAACCCTTCTGTGGCTCTGCGCTTGTGAATTTCTACTCCAAATCCCATTTGTTCGATGACGCTCGCAAGGTGTTCGATGAAATTTCTGACACAGACGAGGTTTGCTATTCTGCCCTCGTCGTTGGTCTGGCACAGAATGCTCAATCCATTGATGCATTATCAGTGTTTAGAGAGATGAAAGCTTCTGAAGTTGCGTCGACGATGTACAGTGTCTCTGGTGCTCTTCGTGCTGCGGCTGATCTTGCTGCGCTGGAGCAATGCAGGGTTTTACATGGCCACGCTGTGGTTGTCGGATTGGATACTGATGTGATTGTTCAAACTTCTCTGATTGATGGGTATGGGAAATCGGGGCTGATAATTGATGCACGGCAGGTGTTTGAGGAAAGTTTGGGATGTATGAATGTTGTGGGGTGGAATGCGATGTTGGCAAGTTATGCACAGCAGGGAGATAAGAATTCTACGCTTGAGCTATTCAATTCAATGGTATCTTTTGGGCTGTGTCCTGATGAGTACACCTTCTTAGCCATTCTAACATCATATTGCAATTCACGTCTAGTTGGTGAGATTGAACTGTGGCTGAGAAGGATGAGAGTGGAGTATGGAGTGCAACCTACCCTAGAGCATTTTACTTGCCTGATAGATGCAATGGGGAGAGCTGGGAAGTTAGAAGAAGCTGAGAGGATAGCCATGACAATGCCTTTTGTGCCAGATGCTGCAGTTTGGCGTGCATTGCTATCGAGCTCCGCAAGCCATGGAGCAGGCGATATGGCATGGGCCATGGCAAAACGGTTACTCGAGCTTAACCCGCACGACGACTCGGCTTATGTGATTGTTGCTAATGCTCTATCTTCTACAGCAAGATGGGAGGAAGTGGCAGTAGTGCGGAAGATGATGAAAGAGAGGCAGGTGAAGAAGAAAAGTGGGAGGAGTTGGATTGAAGTGAGAGGGGAAGTTCATGTGTTTTTAGCAGGGGACAGAAACCATGAAAGGACTGAGGAAATCTATGCAAAGCTAAGAAACTTGATTTGGGAGATAGAGAAGCTTGGGTATGTCCCAATTTGGGCTGAGATGCTTCATGAAGTAGGGGAAAAGGAAAAGAAGGAAGCACTTTGGTATCACAGTGAGAAATTGGCGCTGGCTTATGGGGTGCTGGTCGGGGCGGCACCACCTGGAAAAGCTCTACGGATTGTAAAGAATCTAAGAATATGCAGAGATTGTCATCAAGTTTTTAAGTATGCAAGTAGGGTGCTGGGGAGGGAGATTGTAGCTAGAGATGTAAATAGATACCATAGATTTCTAAATGGTAGCTGCACCTGTGGAGACATCTGGTAAAGTTGAATCCAAACAAATCCCTAACTATGAAATGCAAAGGGGATTTAATTTAACCTTCCTCTTCATTATATTTGTCTCAGATCAATATTCTGCAAATTTGAACACAATCACAATGCGTGCTATATCTCTTCTGTTCTAATTACTTCAAACATTTTCTCGGATTTTCTCAGCAACCAAATTTTACATGCCAAGAACGTACGGAAAAGCGAATAGGAAAAATACTTTCAAAGAACTGCAATCCTAGAATCATTATCATAATTCATCATAAGAGAAACGAACCTCGAGAATAGAGAACCGAAGAAACCATCTCGGCATCGGCGACGGAACTTCGCAAATCACTTTTGAACCGACACGGCGGGGGCACCGAGCAAGGTAGCCTGCTGCAACTCGAGTTCATTGAGCTGCTGTCCGCGATCCATCTCGATGATGAGCGGCACAACGAGGATGAGGAATGTACTGCCGGTGATCCAGGCGTCCTTACCGGTGCTCCGCAGCAGTTGATTGGTGACGAAGGCGGTATTTGAAGCGGCGTGTTTGGATTTGCGGTAGATCGCGGACTCGGACACGGAACGCGATTACCTGGAAAAGACACCGGGAGCGTCGTCGTCGTCATTGTTGCTGAGCGACAATCGCTTCTTGGCATTGACCGCCATGAGAGACATAGAGAGGAAGTTGGCTTTCGGGGAGTCGAGCGCCAAGGTGCTAACAAACTTTTGGCCTTGAATCTTAAAAAGCACTCTTAA

mRNA sequence

ATGAATGACTTATTCGATTCAGACCCAATACCACCACGAGCGCCACCCCTGGCAGCGGCAACGGTGGCGGCGGCGGGGAAGTCAGATCCTCGCATCATCCATGCCCAAGCCATCAAATCTCCGGCCACCGATCGTTCTGTTTACAACAATCTGATAACTCTCTACGGCAAAGCAAACTTGCTGCACTATTCCGTTCGTCTTTTCGACCAAATCCCATTGCCCAATGTTGTGTCTTGGACTGCACTCATCTCTGCTCATTCCAACACGTTTCTAGCTCTTCGCCATTTTGTTTCTATGCTCCGATACCCATCTTTCCCTAACCAACGGACATTAGCTTCTCTTTTCAAGACCTGCGCTTCGCTCCCTTGCGTCTCTTTTGGGCTTTCCCTTCACTCCCTTGCACACAAACTCTCACTCTGCAGTGAACCCTTCTGTGGCTCTGCGCTTGTGAATTTCTACTCCAAATCCCATTTGTTCGATGACGCTCGCAAGGTGTTCGATGAAATTTCTGACACAGACGAGGTTTGCTATTCTGCCCTCGTCGTTGGTCTGGCACAGAATGCTCAATCCATTGATGCATTATCAGTGTTTAGAGAGATGAAAGCTTCTGAAGTTGCGTCGACGATGTACAGTGTCTCTGGTGCTCTTCGTGCTGCGGCTGATCTTGCTGCGCTGGAGCAATGCAGGGTTTTACATGGCCACGCTGTGGTTGTCGGATTGGATACTGATGTGATTGTTCAAACTTCTCTGATTGATGGGTATGGGAAATCGGGGCTGATAATTGATGCACGGCAGGTGTTTGAGGAAAGTTTGGGATGTATGAATGTTGTGGGGTGGAATGCGATGTTGGCAAGTTATGCACAGCAGGGAGATAAGAATTCTACGCTTGAGCTATTCAATTCAATGGTATCTTTTGGGCTGTGTCCTGATGAGTACACCTTCTTAGCCATTCTAACATCATATTGCAATTCACGTCTAGTTGGTGAGATTGAACTGTGGCTGAGAAGGATGAGAGTGGAGTATGGAGTGCAACCTACCCTAGAGCATTTTACTTGCCTGATAGATGCAATGGGGAGAGCTGGGAAGTTAGAAGAAGCTGAGAGGATAGCCATGACAATGCCTTTTGTGCCAGATGCTGCAGTTTGGCGTGCATTGCTATCGAGCTCCGCAAGCCATGGAGCAGGCGATATGGCATGGGCCATGGCAAAACGGTTACTCGAGCTTAACCCGCACGACGACTCGGCTTATGTGATTGTTGCTAATGCTCTATCTTCTACAGCAAGATGGGAGGAAGTGGCAGTAGTGCGGAAGATGATGAAAGAGAGGCAGGTGAAGAAGAAAAGTGGGAGGAGTTGGATTGAAGTGAGAGGGGAAGTTCATGTGTTTTTAGCAGGGGACAGAAACCATGAAAGGACTGAGGAAATCTATGCAAAGCTAAGAAACTTGATTTGGGAGATAGAGAAGCTTGGGTATGTCCCAATTTGGGCTGAGATGCTTCATGAAGTAGGGGAAAAGGAAAAGAAGGAAGCACTTTGGTATCACAGTGAGAAATTGGCGCTGGCTTATGGGGTGCTGGTCGGGGCGGCACCACCTGGAAAAGCTCTACGGATTGTAAAGAATCTAAGAATATGCAGAGATTGTCATCAAGTTTTTAAGTATGCAAGTAGGGTGCTGGGGAGGGAGATTGTAGCTAGAGATAGAACCGAAGAAACCATCTCGGCATCGGCGACGGAACTTCGCAAATCACTTTTGAACCGACACGGCGGGGGCACCGAGCAAGGTAGCCTGCTGCAACTCGAGTTCATTGAGCTGCTGTCCGCGATCCATCTCGATGATGAGCGGCACAACGAGGATGAGGAATGTACTGCCGGTGATCCAGGCGTCCTTACCGGTGCTCCGCAGCAGTTGATTGGTGACGAAGGCGATCGCGGACTCGGACACGGAACGCGATTACCTGGAAAAGACACCGGGAGCGTCGTCGTCGTCATTGTTGCTGAGCGACAATCGCTTCTTGGCATTGACCGCCATGAGAGACATAGAGAGGAAGTTGGCTTTCGGGGAGTCGAGCGCCAAGGTGCTAACAAACTTTTGGCCTTGAATCTTAAAAAGCACTCTTAA

Coding sequence (CDS)

ATGAATGACTTATTCGATTCAGACCCAATACCACCACGAGCGCCACCCCTGGCAGCGGCAACGGTGGCGGCGGCGGGGAAGTCAGATCCTCGCATCATCCATGCCCAAGCCATCAAATCTCCGGCCACCGATCGTTCTGTTTACAACAATCTGATAACTCTCTACGGCAAAGCAAACTTGCTGCACTATTCCGTTCGTCTTTTCGACCAAATCCCATTGCCCAATGTTGTGTCTTGGACTGCACTCATCTCTGCTCATTCCAACACGTTTCTAGCTCTTCGCCATTTTGTTTCTATGCTCCGATACCCATCTTTCCCTAACCAACGGACATTAGCTTCTCTTTTCAAGACCTGCGCTTCGCTCCCTTGCGTCTCTTTTGGGCTTTCCCTTCACTCCCTTGCACACAAACTCTCACTCTGCAGTGAACCCTTCTGTGGCTCTGCGCTTGTGAATTTCTACTCCAAATCCCATTTGTTCGATGACGCTCGCAAGGTGTTCGATGAAATTTCTGACACAGACGAGGTTTGCTATTCTGCCCTCGTCGTTGGTCTGGCACAGAATGCTCAATCCATTGATGCATTATCAGTGTTTAGAGAGATGAAAGCTTCTGAAGTTGCGTCGACGATGTACAGTGTCTCTGGTGCTCTTCGTGCTGCGGCTGATCTTGCTGCGCTGGAGCAATGCAGGGTTTTACATGGCCACGCTGTGGTTGTCGGATTGGATACTGATGTGATTGTTCAAACTTCTCTGATTGATGGGTATGGGAAATCGGGGCTGATAATTGATGCACGGCAGGTGTTTGAGGAAAGTTTGGGATGTATGAATGTTGTGGGGTGGAATGCGATGTTGGCAAGTTATGCACAGCAGGGAGATAAGAATTCTACGCTTGAGCTATTCAATTCAATGGTATCTTTTGGGCTGTGTCCTGATGAGTACACCTTCTTAGCCATTCTAACATCATATTGCAATTCACGTCTAGTTGGTGAGATTGAACTGTGGCTGAGAAGGATGAGAGTGGAGTATGGAGTGCAACCTACCCTAGAGCATTTTACTTGCCTGATAGATGCAATGGGGAGAGCTGGGAAGTTAGAAGAAGCTGAGAGGATAGCCATGACAATGCCTTTTGTGCCAGATGCTGCAGTTTGGCGTGCATTGCTATCGAGCTCCGCAAGCCATGGAGCAGGCGATATGGCATGGGCCATGGCAAAACGGTTACTCGAGCTTAACCCGCACGACGACTCGGCTTATGTGATTGTTGCTAATGCTCTATCTTCTACAGCAAGATGGGAGGAAGTGGCAGTAGTGCGGAAGATGATGAAAGAGAGGCAGGTGAAGAAGAAAAGTGGGAGGAGTTGGATTGAAGTGAGAGGGGAAGTTCATGTGTTTTTAGCAGGGGACAGAAACCATGAAAGGACTGAGGAAATCTATGCAAAGCTAAGAAACTTGATTTGGGAGATAGAGAAGCTTGGGTATGTCCCAATTTGGGCTGAGATGCTTCATGAAGTAGGGGAAAAGGAAAAGAAGGAAGCACTTTGGTATCACAGTGAGAAATTGGCGCTGGCTTATGGGGTGCTGGTCGGGGCGGCACCACCTGGAAAAGCTCTACGGATTGTAAAGAATCTAAGAATATGCAGAGATTGTCATCAAGTTTTTAAGTATGCAAGTAGGGTGCTGGGGAGGGAGATTGTAGCTAGAGATAGAACCGAAGAAACCATCTCGGCATCGGCGACGGAACTTCGCAAATCACTTTTGAACCGACACGGCGGGGGCACCGAGCAAGGTAGCCTGCTGCAACTCGAGTTCATTGAGCTGCTGTCCGCGATCCATCTCGATGATGAGCGGCACAACGAGGATGAGGAATGTACTGCCGGTGATCCAGGCGTCCTTACCGGTGCTCCGCAGCAGTTGATTGGTGACGAAGGCGATCGCGGACTCGGACACGGAACGCGATTACCTGGAAAAGACACCGGGAGCGTCGTCGTCGTCATTGTTGCTGAGCGACAATCGCTTCTTGGCATTGACCGCCATGAGAGACATAGAGAGGAAGTTGGCTTTCGGGGAGTCGAGCGCCAAGGTGCTAACAAACTTTTGGCCTTGAATCTTAAAAAGCACTCTTAA

Protein sequence

MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARDRTEETISASATELRKSLLNRHGGGTEQGSLLQLEFIELLSAIHLDDERHNEDEECTAGDPGVLTGAPQQLIGDEGDRGLGHGTRLPGKDTGSVVVVIVAERQSLLGIDRHERHREEVGFRGVERQGANKLLALNLKKHS
Homology
BLAST of Carg06246 vs. NCBI nr
Match: KAG7028802.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1392.1 bits (3602), Expect = 0.0e+00
Identity = 705/705 (100.00%), Postives = 705/705 (100.00%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
           NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARDRTEETISASATELRKSLLNRHGGGTEQGSLLQLE 600
           LRICRDCHQVFKYASRVLGREIVARDRTEETISASATELRKSLLNRHGGGTEQGSLLQLE
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVARDRTEETISASATELRKSLLNRHGGGTEQGSLLQLE 600

Query: 601 FIELLSAIHLDDERHNEDEECTAGDPGVLTGAPQQLIGDEGDRGLGHGTRLPGKDTGSVV 660
           FIELLSAIHLDDERHNEDEECTAGDPGVLTGAPQQLIGDEGDRGLGHGTRLPGKDTGSVV
Sbjct: 601 FIELLSAIHLDDERHNEDEECTAGDPGVLTGAPQQLIGDEGDRGLGHGTRLPGKDTGSVV 660

Query: 661 VVIVAERQSLLGIDRHERHREEVGFRGVERQGANKLLALNLKKHS 706
           VVIVAERQSLLGIDRHERHREEVGFRGVERQGANKLLALNLKKHS
Sbjct: 661 VVIVAERQSLLGIDRHERHREEVGFRGVERQGANKLLALNLKKHS 705

BLAST of Carg06246 vs. NCBI nr
Match: KAG6597338.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 565/566 (99.82%), Postives = 566/566 (100.00%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DTDVIVQT+LIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
           NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQVFKYASRVLGREIVARD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVARD 566

BLAST of Carg06246 vs. NCBI nr
Match: XP_022947552.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata])

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 560/566 (98.94%), Postives = 562/566 (99.29%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MNDLFDSDPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1   MNDLFDSDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASL KTCAS
Sbjct: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSIDALSVFREMKAS+VASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRM VEYGVQPTLEH+TCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRA 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
           NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQVFKYASRVLGREIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVVRD 565

BLAST of Carg06246 vs. NCBI nr
Match: XP_023540846.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 560/566 (98.94%), Postives = 561/566 (99.12%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MNDLFD DPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYG+ANL
Sbjct: 1   MNDLFDPDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGRANL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLR PSFPNQRTLASLFKTCAS
Sbjct: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRCPSFPNQRTLASLFKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVH FLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHAFLAGDRNHERTEEIYAKLR 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
           NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQVFKYASRVLGREIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVVRD 565

BLAST of Carg06246 vs. NCBI nr
Match: XP_022974509.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima])

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 555/566 (98.06%), Postives = 558/566 (98.59%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MNDLFD DPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1   MNDLFDPDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSIDALS+FREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAV  GL
Sbjct: 181 VVGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DTDVIVQT+LIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SM SFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGR 
Sbjct: 301 SMGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRD 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALSSTARWEEVA+VRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
           NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQVFKYASRVL REIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLRREIVVRD 565

BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match: Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.8e-96
Identity = 200/554 (36.10%), Postives = 329/554 (59.39%), Query Frame = 0

Query: 17  LAAATVAAAGKSDPRIIHAQAIK-SPATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPN 76
           L AA+    G S  + +H  AIK +  +D  V   LI  Y +   +  +  LF++    +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-D 482

Query: 77  VVSWTALISAHSNT---FLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHS 136
           +V+W A+++ ++ +      L+ F  M +     +  TLA++FKTC  L  ++ G  +H+
Sbjct: 483 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 542

Query: 137 LAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSID 196
            A K     + +  S +++ Y K      A+  FD I   D+V ++ ++ G  +N +   
Sbjct: 543 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 602

Query: 197 ALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLID 256
           A  VF +M+   V    ++++   +A++ L ALEQ R +H +A+ +    D  V TSL+D
Sbjct: 603 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 662

Query: 257 GYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEY 316
            Y K G I DA  +F+  +  MN+  WNAML   AQ G+   TL+LF  M S G+ PD+ 
Sbjct: 663 MYAKCGSIDDAYCLFKR-IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 722

Query: 317 TFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMT 376
           TF+ +L++  +S LV E    +R M  +YG++P +EH++CL DA+GRAG +++AE +  +
Sbjct: 723 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 782

Query: 377 MPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEV 436
           M     A+++R LL++    G  +    +A +LLEL P D SAYV+++N  ++ ++W+E+
Sbjct: 783 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 842

Query: 437 AVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYV 496
            + R MMK  +VKK  G SWIEV+ ++H+F+  DR++ +TE IY K++++I +I++ GYV
Sbjct: 843 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 902

Query: 497 PIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFK 556
           P     L +V E+EK+ AL+YHSEKLA+A+G+L  + PP   +R++KNLR+C DCH   K
Sbjct: 903 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLL--STPPSTPIRVIKNLRVCGDCHNAMK 962

Query: 557 YASRVLGREIVARD 567
           Y ++V  REIV RD
Sbjct: 963 YIAKVYNREIVLRD 972

BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.6e-89
Identity = 193/540 (35.74%), Postives = 303/540 (56.11%), Query Frame = 0

Query: 31  RIIHAQAIKSP-ATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISA---H 90
           RI+HA  ++S    D  + N L+ +Y K   L  + ++F+++P  + V+WT LIS    H
Sbjct: 80  RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139

Query: 91  SNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCG 150
                AL  F  MLR+   PN+ TL+S+ K  A+      G  LH    K    S    G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199

Query: 151 SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVA 210
           SAL++ Y++  L DDA+ VFD +   ++V ++AL+ G A+ + +  AL +F+ M      
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259

Query: 211 STMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQV 270
            + +S +    A +    LEQ + +H + +  G         +L+D Y KSG I DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319

Query: 271 FEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRL 330
           F+  L   +VV WN++L +YAQ G     +  F  M   G+ P+E +FL++LT+  +S L
Sbjct: 320 FDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 379

Query: 331 VGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALL 390
           + E   +   M+ + G+ P   H+  ++D +GRAG L  A R    MP  P AA+W+ALL
Sbjct: 380 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 439

Query: 391 SSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKK 450
           ++   H   ++    A+ + EL+P D   +VI+ N  +S  RW + A VRK MKE  VKK
Sbjct: 440 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 499

Query: 451 KSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKE 510
           +   SW+E+   +H+F+A D  H + EEI  K   ++ +I++LGYVP  + ++  V ++E
Sbjct: 500 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 559

Query: 511 KKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
           ++  L YHSEK+ALA+ +L    PPG  + I KN+R+C DCH   K AS+V+GREI+ RD
Sbjct: 560 REVNLQYHSEKIALAFALL--NTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 615

BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match: Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.7e-86
Identity = 187/523 (35.76%), Postives = 295/523 (56.41%), Query Frame = 0

Query: 47  VYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNT---FLALRHFVSMLRYP 106
           V NNLI  Y K+ L   S R F+  P  +  +W+++IS  +     +++L     M+   
Sbjct: 52  VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111

Query: 107 SFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDAR 166
             P+   L S  K+CA L     G S+H L+ K    ++ F GS+LV+ Y+K      AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171

Query: 167 KVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLA 226
           K+FDE+   + V +S ++ G AQ  ++ +AL +F+E     +A   YS S  +   A+  
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231

Query: 227 ALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAML 286
            LE  R +HG ++    D+   V +SL+  Y K G+   A QVF E +   N+  WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291

Query: 287 ASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGV 346
            +YAQ       +ELF  M   G+ P+  TFL +L +  ++ LV E   +  +M+ E  +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRI 351

Query: 347 QPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAK 406
           +PT +H+  L+D +GRAG+L+EA  +   MP  P  +VW ALL+S   H   ++A   A 
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411

Query: 407 RLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFL 466
           ++ EL P     ++ ++NA ++  R+E+ A  RK++++R  KK++G SW+E R +VH F 
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471

Query: 467 AGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYG 526
           AG+R HE+++EIY KL  L  E+EK GY+   + +L EV   EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531

Query: 527 VLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
           ++    P  + +R++KNLR+C DCH   K+ S    R I+ RD
Sbjct: 532 LI--TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRD 570

BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-85
Identity = 190/521 (36.47%), Postives = 302/521 (57.97%), Query Frame = 0

Query: 49  NNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNTFL---ALRHFVSMLRYPSF 108
           N LI +Y K NLL+ + +LFDQ+P  NV+SWT +ISA+S   +   AL   V MLR    
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 109 PNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKV 168
           PN  T +S+ ++C  +  V     LH    K  L S+ F  SAL++ ++K    +DA  V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 219

Query: 169 FDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAAL 228
           FDE+   D + +++++ G AQN++S  AL +F+ MK +   +   +++  LRA   LA L
Sbjct: 220 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 279

Query: 229 EQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLAS 288
           E     H H  +V  D D+I+  +L+D Y K G + DA +VF + +   +V+ W+ M++ 
Sbjct: 280 ELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ-MKERDVITWSTMISG 339

Query: 289 YAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQP 348
            AQ G     L+LF  M S G  P+  T + +L +  ++ L+ +   + R M+  YG+ P
Sbjct: 340 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 399

Query: 349 TLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRL 408
             EH+ C+ID +G+AGKL++A ++   M   PDA  WR LL +        +A   AK++
Sbjct: 400 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 459

Query: 409 LELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAG 468
           + L+P D   Y +++N  +++ +W+ V  +R  M++R +KK+ G SWIEV  ++H F+ G
Sbjct: 460 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 519

Query: 469 DRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVL 528
           D +H +  E+  KL  LI  +  +GYVP    +L ++  ++ +++L +HSEKLALA+G++
Sbjct: 520 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 579

Query: 529 VGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
               P  K +RI KNLRIC DCH   K AS++  R IV RD
Sbjct: 580 --TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRD 612

BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.0e-84
Identity = 192/564 (34.04%), Postives = 302/564 (53.55%), Query Frame = 0

Query: 44  DRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSN---TFLALRHFVSML 103
           D S +N +I L+ +   +  ++  F+Q+   ++V+W ++IS  +       AL  F  ML
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270

Query: 104 RYPSF-PNQRTLASLFKTCASLPCVSFGLSLHS-------------LAHKLSLCSEPFCG 163
           R     P++ TLAS+   CA+L  +  G  +HS             L   +S+ S   CG
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR--CG 330

Query: 164 ----------------------SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGL 223
                                 +AL++ Y K    + A+ +F  + D D V ++A++VG 
Sbjct: 331 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 390

Query: 224 AQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDV 283
            Q+    +A+++FR M         Y+++  L  A+ LA+L   + +HG AV  G    V
Sbjct: 391 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 450

Query: 284 IVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVS 343
            V  +LI  Y K+G I  A + F+      + V W +M+ + AQ G     LELF +M+ 
Sbjct: 451 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 510

Query: 344 FGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLE 403
            GL PD  T++ + ++  ++ LV +   +   M+    + PTL H+ C++D  GRAG L+
Sbjct: 511 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 570

Query: 404 EAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALS 463
           EA+     MP  PD   W +LLS+   H   D+    A+RLL L P +  AY  +AN  S
Sbjct: 571 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 630

Query: 464 STARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIW 523
           +  +WEE A +RK MK+ +VKK+ G SWIEV+ +VHVF   D  H    EIY  ++ +  
Sbjct: 631 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 690

Query: 524 EIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRIC 569
           EI+K+GYVP  A +LH++ E+ K++ L +HSEKLA+A+G++  + P    LRI+KNLR+C
Sbjct: 691 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLI--STPDKTTLRIMKNLRVC 750

BLAST of Carg06246 vs. ExPASy TrEMBL
Match: A0A6J1G6S2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata OX=3662 GN=LOC111451382 PE=3 SV=1)

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 560/566 (98.94%), Postives = 562/566 (99.29%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MNDLFDSDPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1   MNDLFDSDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASL KTCAS
Sbjct: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSIDALSVFREMKAS+VASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRM VEYGVQPTLEH+TCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRA 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
           NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQVFKYASRVLGREIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVVRD 565

BLAST of Carg06246 vs. ExPASy TrEMBL
Match: A0A6J1IHT2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima OX=3661 GN=LOC111473187 PE=3 SV=1)

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 555/566 (98.06%), Postives = 558/566 (98.59%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MNDLFD DPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1   MNDLFDPDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSIDALS+FREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAV  GL
Sbjct: 181 VVGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DTDVIVQT+LIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SM SFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGR 
Sbjct: 301 SMGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRD 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALSSTARWEEVA+VRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
           NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQVFKYASRVL REIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLRREIVVRD 565

BLAST of Carg06246 vs. ExPASy TrEMBL
Match: A0A6J1DUT1 (pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charantia OX=3673 GN=LOC111024565 PE=3 SV=1)

HSP 1 Score: 971.5 bits (2510), Expect = 1.9e-279
Identity = 491/568 (86.44%), Postives = 522/568 (91.90%), Query Frame = 0

Query: 1   MNDLFDSD--PIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKA 60
           MND FD D  P PP APPL     AAAGKSDPRI+HAQAIKSPAT RSVYNNLITLY K+
Sbjct: 1   MNDFFDPDPTPAPPPAPPL-----AAAGKSDPRIVHAQAIKSPATHRSVYNNLITLYSKS 60

Query: 61  NLLHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTC 120
           + LHYSVRLF QIP PNVVSWTALISAHSNT L+LRHF+ MLRYP+FPNQRTLASLFKTC
Sbjct: 61  SFLHYSVRLFHQIPFPNVVSWTALISAHSNTSLSLRHFIYMLRYPAFPNQRTLASLFKTC 120

Query: 121 ASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYS 180
           ASLP V FG +LHSLA+KLSLCSEPF GSALVNFYSK  LF DARKVFDEISD DEVCYS
Sbjct: 121 ASLPSVPFGFALHSLAYKLSLCSEPFSGSALVNFYSKCQLFGDARKVFDEISDRDEVCYS 180

Query: 181 ALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVV 240
           ALVVGLAQNAQSIDALS+FREMK  +VASTMYSVSGALRAAADLAALEQCRVLHGHAVV 
Sbjct: 181 ALVVGLAQNAQSIDALSMFREMKVCDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVT 240

Query: 241 GLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLEL 300
           GLDTDVIVQT+LIDGYGKSGLI+DAR+VF+ESL  MNVVGWNAMLASYAQQGDKNS LEL
Sbjct: 241 GLDTDVIVQTALIDGYGKSGLILDAREVFDESLASMNVVGWNAMLASYAQQGDKNSALEL 300

Query: 301 FNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMG 360
           FNSM + GL PDEY+FLAILTSYCNSR VG+I+LWLRRMRV YGV+PTLEHFTCLIDAMG
Sbjct: 301 FNSMAARGLSPDEYSFLAILTSYCNSRSVGDIQLWLRRMRVGYGVEPTLEHFTCLIDAMG 360

Query: 361 RAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVI 420
           R GKL+EAER+AMTMPF+PDAAVWRALLSSSASHGAG+MAWAMAKRLLELNPHDDSAYVI
Sbjct: 361 RVGKLKEAERVAMTMPFMPDAAVWRALLSSSASHGAGNMAWAMAKRLLELNPHDDSAYVI 420

Query: 421 VANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAK 480
           VANALS+TARWEEVAVVRK+MKERQVKKKSGRSWIEVRG+VHVFLAGDRNHER EE+YAK
Sbjct: 421 VANALSATARWEEVAVVRKLMKERQVKKKSGRSWIEVRGKVHVFLAGDRNHERAEEVYAK 480

Query: 481 LRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIV 540
           LR LI EIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALA+GV+ G APPGKALRIV
Sbjct: 481 LRELIREIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAFGVVAGVAPPGKALRIV 540

Query: 541 KNLRICRDCHQVFKYASRVLGREIVARD 567
           KNLRIC+DCHQVFKYASRVL REI+ RD
Sbjct: 541 KNLRICKDCHQVFKYASRVLEREIIVRD 563

BLAST of Carg06246 vs. ExPASy TrEMBL
Match: A0A5A7U1J3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002030 PE=3 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 2.1e-262
Identity = 464/566 (81.98%), Postives = 510/566 (90.11%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MN  F SDP PP  PPLAAAT   A KSDPRI HAQAIKSPATDR+VYNNLIT Y + NL
Sbjct: 1   MNAFFASDPTPPPEPPLAAATKVVA-KSDPRIDHAQAIKSPATDRAVYNNLITRYSRTNL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLF QIP P++VSWTA ISAHSNTFL+LRHFVSMLRYP+FPN+RTLASLFKTCAS
Sbjct: 61  LHYSVRLFYQIPFPDIVSWTAFISAHSNTFLSLRHFVSMLRYPTFPNERTLASLFKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGL+LHSLA+KLSLC++ + GSALVNFYSK  LF+ A KVFDEISD DE CYSAL
Sbjct: 121 LPCVSFGLALHSLAYKLSLCNDRYSGSALVNFYSKCRLFNHACKVFDEISDRDEFCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSI ALS+FR+MKASEVAST+YSVSGAL AAADLAALE+CRVLH HAVV GL
Sbjct: 181 VVGLAQNAQSIPALSMFRQMKASEVASTIYSVSGALCAAADLAALERCRVLHSHAVVTGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DT+VIVQT+LID YGKSGLII+ARQVF+E+LGCMN+VGWNA+L+SYAQQGD+NST ELFN
Sbjct: 241 DTNVIVQTALIDAYGKSGLIIEARQVFDENLGCMNIVGWNAILSSYAQQGDQNSTRELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SM +F + PDEY+FLAIL+S+CN+  VGEI+ WLRRM VEYGV+PTLEHFTCLIDA+GRA
Sbjct: 301 SMKAFRMSPDEYSFLAILSSFCNAGSVGEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRA 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAER+AMTMPFVPD AVWRALL+SSASHGAGDMAW MAKRLLELN HDDSAYVIVA
Sbjct: 361 GKLEEAERVAMTMPFVPDEAVWRALLTSSASHGAGDMAWKMAKRLLELNLHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALS+TARWEEVAVVRK+MKER VKKKSGRSWIEVRGEVHVFLAGDRNHER EE+ AKL+
Sbjct: 421 NALSATARWEEVAVVRKLMKERDVKKKSGRSWIEVRGEVHVFLAGDRNHERAEELNAKLK 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
            L+ EIEKLGYVPI  E+L EVGEKEKKEAL YHSEKLALAYG+L G A PGKALRIVKN
Sbjct: 481 ELVGEIEKLGYVPICGEVLQEVGEKEKKEALLYHSEKLALAYGILTGVALPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQ FKYASRVL +EI+ RD
Sbjct: 541 LRICRDCHQFFKYASRVLKKEIIVRD 565

BLAST of Carg06246 vs. ExPASy TrEMBL
Match: A0A1S3AX28 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucumis melo OX=3656 GN=LOC103483548 PE=3 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 2.1e-262
Identity = 464/566 (81.98%), Postives = 510/566 (90.11%), Query Frame = 0

Query: 1   MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
           MN  F SDP PP  PPLAAAT   A KSDPRI HAQAIKSPATDR+VYNNLIT Y + NL
Sbjct: 1   MNAFFASDPTPPPEPPLAAATKVVA-KSDPRIDHAQAIKSPATDRAVYNNLITRYSRTNL 60

Query: 61  LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
           LHYSVRLF QIP P++VSWTA ISAHSNTFL+LRHFVSMLRYP+FPN+RTLASLFKTCAS
Sbjct: 61  LHYSVRLFYQIPFPDIVSWTAFISAHSNTFLSLRHFVSMLRYPTFPNERTLASLFKTCAS 120

Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
           LPCVSFGL+LHSLA+KLSLC++ + GSALVNFYSK  LF+ A KVFDEISD DE CYSAL
Sbjct: 121 LPCVSFGLALHSLAYKLSLCNDRYSGSALVNFYSKCRLFNHACKVFDEISDRDEFCYSAL 180

Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
           VVGLAQNAQSI ALS+FR+MKASEVAST+YSVSGAL AAADLAALE+CRVLH HAVV GL
Sbjct: 181 VVGLAQNAQSIPALSMFRQMKASEVASTIYSVSGALCAAADLAALERCRVLHSHAVVTGL 240

Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
           DT+VIVQT+LID YGKSGLII+ARQVF+E+LGCMN+VGWNA+L+SYAQQGD+NST ELFN
Sbjct: 241 DTNVIVQTALIDAYGKSGLIIEARQVFDENLGCMNIVGWNAILSSYAQQGDQNSTRELFN 300

Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
           SM +F + PDEY+FLAIL+S+CN+  VGEI+ WLRRM VEYGV+PTLEHFTCLIDA+GRA
Sbjct: 301 SMKAFRMSPDEYSFLAILSSFCNAGSVGEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRA 360

Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
           GKLEEAER+AMTMPFVPD AVWRALL+SSASHGAGDMAW MAKRLLELN HDDSAYVIVA
Sbjct: 361 GKLEEAERVAMTMPFVPDEAVWRALLTSSASHGAGDMAWKMAKRLLELNLHDDSAYVIVA 420

Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
           NALS+TARWEEVAVVRK+MKER VKKKSGRSWIEVRGEVHVFLAGDRNHER EE+ AKL+
Sbjct: 421 NALSATARWEEVAVVRKLMKERDVKKKSGRSWIEVRGEVHVFLAGDRNHERAEELNAKLK 480

Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
            L+ EIEKLGYVPI  E+L EVGEKEKKEAL YHSEKLALAYG+L G A PGKALRIVKN
Sbjct: 481 ELVGEIEKLGYVPICGEVLQEVGEKEKKEALLYHSEKLALAYGILTGVALPGKALRIVKN 540

Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
           LRICRDCHQ FKYASRVL +EI+ RD
Sbjct: 541 LRICRDCHQFFKYASRVLKKEIIVRD 565

BLAST of Carg06246 vs. TAIR 10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 355.1 bits (910), Expect = 1.3e-97
Identity = 200/554 (36.10%), Postives = 329/554 (59.39%), Query Frame = 0

Query: 17  LAAATVAAAGKSDPRIIHAQAIK-SPATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPN 76
           L AA+    G S  + +H  AIK +  +D  V   LI  Y +   +  +  LF++    +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-D 482

Query: 77  VVSWTALISAHSNT---FLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHS 136
           +V+W A+++ ++ +      L+ F  M +     +  TLA++FKTC  L  ++ G  +H+
Sbjct: 483 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 542

Query: 137 LAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSID 196
            A K     + +  S +++ Y K      A+  FD I   D+V ++ ++ G  +N +   
Sbjct: 543 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 602

Query: 197 ALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLID 256
           A  VF +M+   V    ++++   +A++ L ALEQ R +H +A+ +    D  V TSL+D
Sbjct: 603 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 662

Query: 257 GYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEY 316
            Y K G I DA  +F+  +  MN+  WNAML   AQ G+   TL+LF  M S G+ PD+ 
Sbjct: 663 MYAKCGSIDDAYCLFKR-IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 722

Query: 317 TFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMT 376
           TF+ +L++  +S LV E    +R M  +YG++P +EH++CL DA+GRAG +++AE +  +
Sbjct: 723 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 782

Query: 377 MPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEV 436
           M     A+++R LL++    G  +    +A +LLEL P D SAYV+++N  ++ ++W+E+
Sbjct: 783 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 842

Query: 437 AVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYV 496
            + R MMK  +VKK  G SWIEV+ ++H+F+  DR++ +TE IY K++++I +I++ GYV
Sbjct: 843 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 902

Query: 497 PIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFK 556
           P     L +V E+EK+ AL+YHSEKLA+A+G+L  + PP   +R++KNLR+C DCH   K
Sbjct: 903 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLL--STPPSTPIRVIKNLRVCGDCHNAMK 962

Query: 557 YASRVLGREIVARD 567
           Y ++V  REIV RD
Sbjct: 963 YIAKVYNREIVLRD 972

BLAST of Carg06246 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 330.9 bits (847), Expect = 2.6e-90
Identity = 193/540 (35.74%), Postives = 303/540 (56.11%), Query Frame = 0

Query: 31  RIIHAQAIKSP-ATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISA---H 90
           RI+HA  ++S    D  + N L+ +Y K   L  + ++F+++P  + V+WT LIS    H
Sbjct: 80  RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139

Query: 91  SNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCG 150
                AL  F  MLR+   PN+ TL+S+ K  A+      G  LH    K    S    G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199

Query: 151 SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVA 210
           SAL++ Y++  L DDA+ VFD +   ++V ++AL+ G A+ + +  AL +F+ M      
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259

Query: 211 STMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQV 270
            + +S +    A +    LEQ + +H + +  G         +L+D Y KSG I DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319

Query: 271 FEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRL 330
           F+  L   +VV WN++L +YAQ G     +  F  M   G+ P+E +FL++LT+  +S L
Sbjct: 320 FDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 379

Query: 331 VGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALL 390
           + E   +   M+ + G+ P   H+  ++D +GRAG L  A R    MP  P AA+W+ALL
Sbjct: 380 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 439

Query: 391 SSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKK 450
           ++   H   ++    A+ + EL+P D   +VI+ N  +S  RW + A VRK MKE  VKK
Sbjct: 440 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 499

Query: 451 KSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKE 510
           +   SW+E+   +H+F+A D  H + EEI  K   ++ +I++LGYVP  + ++  V ++E
Sbjct: 500 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 559

Query: 511 KKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
           ++  L YHSEK+ALA+ +L    PPG  + I KN+R+C DCH   K AS+V+GREI+ RD
Sbjct: 560 REVNLQYHSEKIALAFALL--NTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 615

BLAST of Carg06246 vs. TAIR 10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1 )

HSP 1 Score: 322.0 bits (824), Expect = 1.2e-87
Identity = 187/523 (35.76%), Postives = 295/523 (56.41%), Query Frame = 0

Query: 47  VYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNT---FLALRHFVSMLRYP 106
           V NNLI  Y K+ L   S R F+  P  +  +W+++IS  +     +++L     M+   
Sbjct: 52  VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111

Query: 107 SFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDAR 166
             P+   L S  K+CA L     G S+H L+ K    ++ F GS+LV+ Y+K      AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171

Query: 167 KVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLA 226
           K+FDE+   + V +S ++ G AQ  ++ +AL +F+E     +A   YS S  +   A+  
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231

Query: 227 ALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAML 286
            LE  R +HG ++    D+   V +SL+  Y K G+   A QVF E +   N+  WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291

Query: 287 ASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGV 346
            +YAQ       +ELF  M   G+ P+  TFL +L +  ++ LV E   +  +M+ E  +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRI 351

Query: 347 QPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAK 406
           +PT +H+  L+D +GRAG+L+EA  +   MP  P  +VW ALL+S   H   ++A   A 
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411

Query: 407 RLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFL 466
           ++ EL P     ++ ++NA ++  R+E+ A  RK++++R  KK++G SW+E R +VH F 
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471

Query: 467 AGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYG 526
           AG+R HE+++EIY KL  L  E+EK GY+   + +L EV   EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531

Query: 527 VLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
           ++    P  + +R++KNLR+C DCH   K+ S    R I+ RD
Sbjct: 532 LI--TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRD 570

BLAST of Carg06246 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 319.3 bits (817), Expect = 7.7e-87
Identity = 190/521 (36.47%), Postives = 302/521 (57.97%), Query Frame = 0

Query: 49  NNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNTFL---ALRHFVSMLRYPSF 108
           N LI +Y K NLL+ + +LFDQ+P  NV+SWT +ISA+S   +   AL   V MLR    
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 109 PNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKV 168
           PN  T +S+ ++C  +  V     LH    K  L S+ F  SAL++ ++K    +DA  V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 219

Query: 169 FDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAAL 228
           FDE+   D + +++++ G AQN++S  AL +F+ MK +   +   +++  LRA   LA L
Sbjct: 220 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 279

Query: 229 EQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLAS 288
           E     H H  +V  D D+I+  +L+D Y K G + DA +VF + +   +V+ W+ M++ 
Sbjct: 280 ELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ-MKERDVITWSTMISG 339

Query: 289 YAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQP 348
            AQ G     L+LF  M S G  P+  T + +L +  ++ L+ +   + R M+  YG+ P
Sbjct: 340 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 399

Query: 349 TLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRL 408
             EH+ C+ID +G+AGKL++A ++   M   PDA  WR LL +        +A   AK++
Sbjct: 400 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 459

Query: 409 LELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAG 468
           + L+P D   Y +++N  +++ +W+ V  +R  M++R +KK+ G SWIEV  ++H F+ G
Sbjct: 460 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 519

Query: 469 DRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVL 528
           D +H +  E+  KL  LI  +  +GYVP    +L ++  ++ +++L +HSEKLALA+G++
Sbjct: 520 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 579

Query: 529 VGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
               P  K +RI KNLRIC DCH   K AS++  R IV RD
Sbjct: 580 --TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRD 612

BLAST of Carg06246 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 315.1 bits (806), Expect = 1.4e-85
Identity = 192/564 (34.04%), Postives = 302/564 (53.55%), Query Frame = 0

Query: 44  DRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSN---TFLALRHFVSML 103
           D S +N +I L+ +   +  ++  F+Q+   ++V+W ++IS  +       AL  F  ML
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270

Query: 104 RYPSF-PNQRTLASLFKTCASLPCVSFGLSLHS-------------LAHKLSLCSEPFCG 163
           R     P++ TLAS+   CA+L  +  G  +HS             L   +S+ S   CG
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR--CG 330

Query: 164 ----------------------SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGL 223
                                 +AL++ Y K    + A+ +F  + D D V ++A++VG 
Sbjct: 331 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 390

Query: 224 AQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDV 283
            Q+    +A+++FR M         Y+++  L  A+ LA+L   + +HG AV  G    V
Sbjct: 391 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 450

Query: 284 IVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVS 343
            V  +LI  Y K+G I  A + F+      + V W +M+ + AQ G     LELF +M+ 
Sbjct: 451 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 510

Query: 344 FGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLE 403
            GL PD  T++ + ++  ++ LV +   +   M+    + PTL H+ C++D  GRAG L+
Sbjct: 511 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 570

Query: 404 EAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALS 463
           EA+     MP  PD   W +LLS+   H   D+    A+RLL L P +  AY  +AN  S
Sbjct: 571 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 630

Query: 464 STARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIW 523
           +  +WEE A +RK MK+ +VKK+ G SWIEV+ +VHVF   D  H    EIY  ++ +  
Sbjct: 631 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 690

Query: 524 EIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRIC 569
           EI+K+GYVP  A +LH++ E+ K++ L +HSEKLA+A+G++  + P    LRI+KNLR+C
Sbjct: 691 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLI--STPDKTTLRIMKNLRVC 750

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7028802.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6597338.10.0e+0099.82Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022947552.10.0e+0098.94pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata][more]
XP_023540846.10.0e+0098.94pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp... [more]
XP_022974509.10.0e+0098.06pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SMZ21.8e-9636.10Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
Q9LIQ73.6e-8935.74Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... [more]
Q9LTF41.7e-8635.76Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... [more]
Q9SI531.1e-8536.47Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
Q9SHZ82.0e-8434.04Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1G6S20.0e+0098.94pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata... [more]
A0A6J1IHT20.0e+0098.06pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima O... [more]
A0A6J1DUT11.9e-27986.44pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charanti... [more]
A0A5A7U1J32.1e-26281.98Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AX282.1e-26281.98pentatricopeptide repeat-containing protein At4g33170-like OS=Cucumis melo OX=36... [more]
Match NameE-valueIdentityDescription
AT4G33170.11.3e-9736.10Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G24000.12.6e-9035.74Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G52630.11.2e-8735.76mitochondrial RNAediting factor 1 [more]
AT2G03880.17.7e-8736.47Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G22070.11.4e-8534.04pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 275..323
e-value: 9.6E-11
score: 41.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 175..203
e-value: 0.0075
score: 16.4
coord: 248..269
e-value: 0.0037
score: 17.4
coord: 47..70
e-value: 0.3
score: 11.4
coord: 349..369
e-value: 0.033
score: 14.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 279..311
e-value: 1.2E-5
score: 23.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 275..309
score: 10.840783
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 173..207
score: 9.218511
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 273..474
e-value: 1.6E-34
score: 121.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 128..230
e-value: 4.5E-11
score: 44.4
coord: 34..124
e-value: 1.7E-9
score: 39.3
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 449..567
e-value: 4.8E-34
score: 117.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..652
NoneNo IPR availablePANTHERPTHR47928:SF49PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 30..568
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 30..568

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06246-RACarg06246-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding