Homology
BLAST of Carg06246 vs. NCBI nr
Match:
KAG7028802.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1392.1 bits (3602), Expect = 0.0e+00
Identity = 705/705 (100.00%), Postives = 705/705 (100.00%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARDRTEETISASATELRKSLLNRHGGGTEQGSLLQLE 600
LRICRDCHQVFKYASRVLGREIVARDRTEETISASATELRKSLLNRHGGGTEQGSLLQLE
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVARDRTEETISASATELRKSLLNRHGGGTEQGSLLQLE 600
Query: 601 FIELLSAIHLDDERHNEDEECTAGDPGVLTGAPQQLIGDEGDRGLGHGTRLPGKDTGSVV 660
FIELLSAIHLDDERHNEDEECTAGDPGVLTGAPQQLIGDEGDRGLGHGTRLPGKDTGSVV
Sbjct: 601 FIELLSAIHLDDERHNEDEECTAGDPGVLTGAPQQLIGDEGDRGLGHGTRLPGKDTGSVV 660
Query: 661 VVIVAERQSLLGIDRHERHREEVGFRGVERQGANKLLALNLKKHS 706
VVIVAERQSLLGIDRHERHREEVGFRGVERQGANKLLALNLKKHS
Sbjct: 661 VVIVAERQSLLGIDRHERHREEVGFRGVERQGANKLLALNLKKHS 705
BLAST of Carg06246 vs. NCBI nr
Match:
KAG6597338.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 565/566 (99.82%), Postives = 566/566 (100.00%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQT+LIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQVFKYASRVLGREIVARD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVARD 566
BLAST of Carg06246 vs. NCBI nr
Match:
XP_022947552.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata])
HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 560/566 (98.94%), Postives = 562/566 (99.29%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MNDLFDSDPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASL KTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSIDALSVFREMKAS+VASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRM VEYGVQPTLEH+TCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRA 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQVFKYASRVLGREIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVVRD 565
BLAST of Carg06246 vs. NCBI nr
Match:
XP_023540846.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 560/566 (98.94%), Postives = 561/566 (99.12%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MNDLFD DPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYG+ANL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGRANL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLR PSFPNQRTLASLFKTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRCPSFPNQRTLASLFKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVH FLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHAFLAGDRNHERTEEIYAKLR 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQVFKYASRVLGREIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVVRD 565
BLAST of Carg06246 vs. NCBI nr
Match:
XP_022974509.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima])
HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 555/566 (98.06%), Postives = 558/566 (98.59%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MNDLFD DPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSIDALS+FREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAV GL
Sbjct: 181 VVGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQT+LIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SM SFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGR
Sbjct: 301 SMGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRD 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALSSTARWEEVA+VRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQVFKYASRVL REIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLRREIVVRD 565
BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 355.1 bits (910), Expect = 1.8e-96
Identity = 200/554 (36.10%), Postives = 329/554 (59.39%), Query Frame = 0
Query: 17 LAAATVAAAGKSDPRIIHAQAIK-SPATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPN 76
L AA+ G S + +H AIK + +D V LI Y + + + LF++ +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-D 482
Query: 77 VVSWTALISAHSNT---FLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHS 136
+V+W A+++ ++ + L+ F M + + TLA++FKTC L ++ G +H+
Sbjct: 483 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 542
Query: 137 LAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSID 196
A K + + S +++ Y K A+ FD I D+V ++ ++ G +N +
Sbjct: 543 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 602
Query: 197 ALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLID 256
A VF +M+ V ++++ +A++ L ALEQ R +H +A+ + D V TSL+D
Sbjct: 603 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 662
Query: 257 GYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEY 316
Y K G I DA +F+ + MN+ WNAML AQ G+ TL+LF M S G+ PD+
Sbjct: 663 MYAKCGSIDDAYCLFKR-IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 722
Query: 317 TFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMT 376
TF+ +L++ +S LV E +R M +YG++P +EH++CL DA+GRAG +++AE + +
Sbjct: 723 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 782
Query: 377 MPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEV 436
M A+++R LL++ G + +A +LLEL P D SAYV+++N ++ ++W+E+
Sbjct: 783 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 842
Query: 437 AVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYV 496
+ R MMK +VKK G SWIEV+ ++H+F+ DR++ +TE IY K++++I +I++ GYV
Sbjct: 843 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 902
Query: 497 PIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFK 556
P L +V E+EK+ AL+YHSEKLA+A+G+L + PP +R++KNLR+C DCH K
Sbjct: 903 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLL--STPPSTPIRVIKNLRVCGDCHNAMK 962
Query: 557 YASRVLGREIVARD 567
Y ++V REIV RD
Sbjct: 963 YIAKVYNREIVLRD 972
BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 330.9 bits (847), Expect = 3.6e-89
Identity = 193/540 (35.74%), Postives = 303/540 (56.11%), Query Frame = 0
Query: 31 RIIHAQAIKSP-ATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISA---H 90
RI+HA ++S D + N L+ +Y K L + ++F+++P + V+WT LIS H
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 91 SNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCG 150
AL F MLR+ PN+ TL+S+ K A+ G LH K S G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 151 SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVA 210
SAL++ Y++ L DDA+ VFD + ++V ++AL+ G A+ + + AL +F+ M
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 211 STMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQV 270
+ +S + A + LEQ + +H + + G +L+D Y KSG I DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 271 FEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRL 330
F+ L +VV WN++L +YAQ G + F M G+ P+E +FL++LT+ +S L
Sbjct: 320 FDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 379
Query: 331 VGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALL 390
+ E + M+ + G+ P H+ ++D +GRAG L A R MP P AA+W+ALL
Sbjct: 380 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 439
Query: 391 SSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKK 450
++ H ++ A+ + EL+P D +VI+ N +S RW + A VRK MKE VKK
Sbjct: 440 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 499
Query: 451 KSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKE 510
+ SW+E+ +H+F+A D H + EEI K ++ +I++LGYVP + ++ V ++E
Sbjct: 500 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 559
Query: 511 KKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
++ L YHSEK+ALA+ +L PPG + I KN+R+C DCH K AS+V+GREI+ RD
Sbjct: 560 REVNLQYHSEKIALAFALL--NTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 615
BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match:
Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)
HSP 1 Score: 322.0 bits (824), Expect = 1.7e-86
Identity = 187/523 (35.76%), Postives = 295/523 (56.41%), Query Frame = 0
Query: 47 VYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNT---FLALRHFVSMLRYP 106
V NNLI Y K+ L S R F+ P + +W+++IS + +++L M+
Sbjct: 52 VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111
Query: 107 SFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDAR 166
P+ L S K+CA L G S+H L+ K ++ F GS+LV+ Y+K AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 167 KVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLA 226
K+FDE+ + V +S ++ G AQ ++ +AL +F+E +A YS S + A+
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 227 ALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAML 286
LE R +HG ++ D+ V +SL+ Y K G+ A QVF E + N+ WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291
Query: 287 ASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGV 346
+YAQ +ELF M G+ P+ TFL +L + ++ LV E + +M+ E +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRI 351
Query: 347 QPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAK 406
+PT +H+ L+D +GRAG+L+EA + MP P +VW ALL+S H ++A A
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411
Query: 407 RLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFL 466
++ EL P ++ ++NA ++ R+E+ A RK++++R KK++G SW+E R +VH F
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471
Query: 467 AGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYG 526
AG+R HE+++EIY KL L E+EK GY+ + +L EV EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531
Query: 527 VLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
++ P + +R++KNLR+C DCH K+ S R I+ RD
Sbjct: 532 LI--TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRD 570
BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match:
Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)
HSP 1 Score: 319.3 bits (817), Expect = 1.1e-85
Identity = 190/521 (36.47%), Postives = 302/521 (57.97%), Query Frame = 0
Query: 49 NNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNTFL---ALRHFVSMLRYPSF 108
N LI +Y K NLL+ + +LFDQ+P NV+SWT +ISA+S + AL V MLR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 109 PNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKV 168
PN T +S+ ++C + V LH K L S+ F SAL++ ++K +DA V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 219
Query: 169 FDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAAL 228
FDE+ D + +++++ G AQN++S AL +F+ MK + + +++ LRA LA L
Sbjct: 220 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 279
Query: 229 EQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLAS 288
E H H +V D D+I+ +L+D Y K G + DA +VF + + +V+ W+ M++
Sbjct: 280 ELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ-MKERDVITWSTMISG 339
Query: 289 YAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQP 348
AQ G L+LF M S G P+ T + +L + ++ L+ + + R M+ YG+ P
Sbjct: 340 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 399
Query: 349 TLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRL 408
EH+ C+ID +G+AGKL++A ++ M PDA WR LL + +A AK++
Sbjct: 400 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 459
Query: 409 LELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAG 468
+ L+P D Y +++N +++ +W+ V +R M++R +KK+ G SWIEV ++H F+ G
Sbjct: 460 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 519
Query: 469 DRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVL 528
D +H + E+ KL LI + +GYVP +L ++ ++ +++L +HSEKLALA+G++
Sbjct: 520 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 579
Query: 529 VGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
P K +RI KNLRIC DCH K AS++ R IV RD
Sbjct: 580 --TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRD 612
BLAST of Carg06246 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 2.0e-84
Identity = 192/564 (34.04%), Postives = 302/564 (53.55%), Query Frame = 0
Query: 44 DRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSN---TFLALRHFVSML 103
D S +N +I L+ + + ++ F+Q+ ++V+W ++IS + AL F ML
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 104 RYPSF-PNQRTLASLFKTCASLPCVSFGLSLHS-------------LAHKLSLCSEPFCG 163
R P++ TLAS+ CA+L + G +HS L +S+ S CG
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR--CG 330
Query: 164 ----------------------SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGL 223
+AL++ Y K + A+ +F + D D V ++A++VG
Sbjct: 331 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 390
Query: 224 AQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDV 283
Q+ +A+++FR M Y+++ L A+ LA+L + +HG AV G V
Sbjct: 391 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 450
Query: 284 IVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVS 343
V +LI Y K+G I A + F+ + V W +M+ + AQ G LELF +M+
Sbjct: 451 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 510
Query: 344 FGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLE 403
GL PD T++ + ++ ++ LV + + M+ + PTL H+ C++D GRAG L+
Sbjct: 511 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 570
Query: 404 EAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALS 463
EA+ MP PD W +LLS+ H D+ A+RLL L P + AY +AN S
Sbjct: 571 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 630
Query: 464 STARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIW 523
+ +WEE A +RK MK+ +VKK+ G SWIEV+ +VHVF D H EIY ++ +
Sbjct: 631 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 690
Query: 524 EIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRIC 569
EI+K+GYVP A +LH++ E+ K++ L +HSEKLA+A+G++ + P LRI+KNLR+C
Sbjct: 691 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLI--STPDKTTLRIMKNLRVC 750
BLAST of Carg06246 vs. ExPASy TrEMBL
Match:
A0A6J1G6S2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata OX=3662 GN=LOC111451382 PE=3 SV=1)
HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 560/566 (98.94%), Postives = 562/566 (99.29%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MNDLFDSDPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASL KTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSIDALSVFREMKAS+VASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRM VEYGVQPTLEH+TCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRA 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQVFKYASRVLGREIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVVRD 565
BLAST of Carg06246 vs. ExPASy TrEMBL
Match:
A0A6J1IHT2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima OX=3661 GN=LOC111473187 PE=3 SV=1)
HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 555/566 (98.06%), Postives = 558/566 (98.59%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MNDLFD DPIPPRAPPLAAAT AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAAT-AAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSIDALS+FREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAV GL
Sbjct: 181 VVGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQT+LIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SM SFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGR
Sbjct: 301 SMGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRD 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALSSTARWEEVA+VRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR
Sbjct: 421 NALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQVFKYASRVL REIV RD
Sbjct: 541 LRICRDCHQVFKYASRVLRREIVVRD 565
BLAST of Carg06246 vs. ExPASy TrEMBL
Match:
A0A6J1DUT1 (pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charantia OX=3673 GN=LOC111024565 PE=3 SV=1)
HSP 1 Score: 971.5 bits (2510), Expect = 1.9e-279
Identity = 491/568 (86.44%), Postives = 522/568 (91.90%), Query Frame = 0
Query: 1 MNDLFDSD--PIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKA 60
MND FD D P PP APPL AAAGKSDPRI+HAQAIKSPAT RSVYNNLITLY K+
Sbjct: 1 MNDFFDPDPTPAPPPAPPL-----AAAGKSDPRIVHAQAIKSPATHRSVYNNLITLYSKS 60
Query: 61 NLLHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTC 120
+ LHYSVRLF QIP PNVVSWTALISAHSNT L+LRHF+ MLRYP+FPNQRTLASLFKTC
Sbjct: 61 SFLHYSVRLFHQIPFPNVVSWTALISAHSNTSLSLRHFIYMLRYPAFPNQRTLASLFKTC 120
Query: 121 ASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYS 180
ASLP V FG +LHSLA+KLSLCSEPF GSALVNFYSK LF DARKVFDEISD DEVCYS
Sbjct: 121 ASLPSVPFGFALHSLAYKLSLCSEPFSGSALVNFYSKCQLFGDARKVFDEISDRDEVCYS 180
Query: 181 ALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVV 240
ALVVGLAQNAQSIDALS+FREMK +VASTMYSVSGALRAAADLAALEQCRVLHGHAVV
Sbjct: 181 ALVVGLAQNAQSIDALSMFREMKVCDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVT 240
Query: 241 GLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLEL 300
GLDTDVIVQT+LIDGYGKSGLI+DAR+VF+ESL MNVVGWNAMLASYAQQGDKNS LEL
Sbjct: 241 GLDTDVIVQTALIDGYGKSGLILDAREVFDESLASMNVVGWNAMLASYAQQGDKNSALEL 300
Query: 301 FNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMG 360
FNSM + GL PDEY+FLAILTSYCNSR VG+I+LWLRRMRV YGV+PTLEHFTCLIDAMG
Sbjct: 301 FNSMAARGLSPDEYSFLAILTSYCNSRSVGDIQLWLRRMRVGYGVEPTLEHFTCLIDAMG 360
Query: 361 RAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVI 420
R GKL+EAER+AMTMPF+PDAAVWRALLSSSASHGAG+MAWAMAKRLLELNPHDDSAYVI
Sbjct: 361 RVGKLKEAERVAMTMPFMPDAAVWRALLSSSASHGAGNMAWAMAKRLLELNPHDDSAYVI 420
Query: 421 VANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAK 480
VANALS+TARWEEVAVVRK+MKERQVKKKSGRSWIEVRG+VHVFLAGDRNHER EE+YAK
Sbjct: 421 VANALSATARWEEVAVVRKLMKERQVKKKSGRSWIEVRGKVHVFLAGDRNHERAEEVYAK 480
Query: 481 LRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIV 540
LR LI EIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALA+GV+ G APPGKALRIV
Sbjct: 481 LRELIREIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAFGVVAGVAPPGKALRIV 540
Query: 541 KNLRICRDCHQVFKYASRVLGREIVARD 567
KNLRIC+DCHQVFKYASRVL REI+ RD
Sbjct: 541 KNLRICKDCHQVFKYASRVLEREIIVRD 563
BLAST of Carg06246 vs. ExPASy TrEMBL
Match:
A0A5A7U1J3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002030 PE=3 SV=1)
HSP 1 Score: 914.8 bits (2363), Expect = 2.1e-262
Identity = 464/566 (81.98%), Postives = 510/566 (90.11%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MN F SDP PP PPLAAAT A KSDPRI HAQAIKSPATDR+VYNNLIT Y + NL
Sbjct: 1 MNAFFASDPTPPPEPPLAAATKVVA-KSDPRIDHAQAIKSPATDRAVYNNLITRYSRTNL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLF QIP P++VSWTA ISAHSNTFL+LRHFVSMLRYP+FPN+RTLASLFKTCAS
Sbjct: 61 LHYSVRLFYQIPFPDIVSWTAFISAHSNTFLSLRHFVSMLRYPTFPNERTLASLFKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGL+LHSLA+KLSLC++ + GSALVNFYSK LF+ A KVFDEISD DE CYSAL
Sbjct: 121 LPCVSFGLALHSLAYKLSLCNDRYSGSALVNFYSKCRLFNHACKVFDEISDRDEFCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSI ALS+FR+MKASEVAST+YSVSGAL AAADLAALE+CRVLH HAVV GL
Sbjct: 181 VVGLAQNAQSIPALSMFRQMKASEVASTIYSVSGALCAAADLAALERCRVLHSHAVVTGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DT+VIVQT+LID YGKSGLII+ARQVF+E+LGCMN+VGWNA+L+SYAQQGD+NST ELFN
Sbjct: 241 DTNVIVQTALIDAYGKSGLIIEARQVFDENLGCMNIVGWNAILSSYAQQGDQNSTRELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SM +F + PDEY+FLAIL+S+CN+ VGEI+ WLRRM VEYGV+PTLEHFTCLIDA+GRA
Sbjct: 301 SMKAFRMSPDEYSFLAILSSFCNAGSVGEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRA 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAER+AMTMPFVPD AVWRALL+SSASHGAGDMAW MAKRLLELN HDDSAYVIVA
Sbjct: 361 GKLEEAERVAMTMPFVPDEAVWRALLTSSASHGAGDMAWKMAKRLLELNLHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALS+TARWEEVAVVRK+MKER VKKKSGRSWIEVRGEVHVFLAGDRNHER EE+ AKL+
Sbjct: 421 NALSATARWEEVAVVRKLMKERDVKKKSGRSWIEVRGEVHVFLAGDRNHERAEELNAKLK 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
L+ EIEKLGYVPI E+L EVGEKEKKEAL YHSEKLALAYG+L G A PGKALRIVKN
Sbjct: 481 ELVGEIEKLGYVPICGEVLQEVGEKEKKEALLYHSEKLALAYGILTGVALPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQ FKYASRVL +EI+ RD
Sbjct: 541 LRICRDCHQFFKYASRVLKKEIIVRD 565
BLAST of Carg06246 vs. ExPASy TrEMBL
Match:
A0A1S3AX28 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucumis melo OX=3656 GN=LOC103483548 PE=3 SV=1)
HSP 1 Score: 914.8 bits (2363), Expect = 2.1e-262
Identity = 464/566 (81.98%), Postives = 510/566 (90.11%), Query Frame = 0
Query: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
MN F SDP PP PPLAAAT A KSDPRI HAQAIKSPATDR+VYNNLIT Y + NL
Sbjct: 1 MNAFFASDPTPPPEPPLAAATKVVA-KSDPRIDHAQAIKSPATDRAVYNNLITRYSRTNL 60
Query: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
LHYSVRLF QIP P++VSWTA ISAHSNTFL+LRHFVSMLRYP+FPN+RTLASLFKTCAS
Sbjct: 61 LHYSVRLFYQIPFPDIVSWTAFISAHSNTFLSLRHFVSMLRYPTFPNERTLASLFKTCAS 120
Query: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
LPCVSFGL+LHSLA+KLSLC++ + GSALVNFYSK LF+ A KVFDEISD DE CYSAL
Sbjct: 121 LPCVSFGLALHSLAYKLSLCNDRYSGSALVNFYSKCRLFNHACKVFDEISDRDEFCYSAL 180
Query: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
VVGLAQNAQSI ALS+FR+MKASEVAST+YSVSGAL AAADLAALE+CRVLH HAVV GL
Sbjct: 181 VVGLAQNAQSIPALSMFRQMKASEVASTIYSVSGALCAAADLAALERCRVLHSHAVVTGL 240
Query: 241 DTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DT+VIVQT+LID YGKSGLII+ARQVF+E+LGCMN+VGWNA+L+SYAQQGD+NST ELFN
Sbjct: 241 DTNVIVQTALIDAYGKSGLIIEARQVFDENLGCMNIVGWNAILSSYAQQGDQNSTRELFN 300
Query: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
SM +F + PDEY+FLAIL+S+CN+ VGEI+ WLRRM VEYGV+PTLEHFTCLIDA+GRA
Sbjct: 301 SMKAFRMSPDEYSFLAILSSFCNAGSVGEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRA 360
Query: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
GKLEEAER+AMTMPFVPD AVWRALL+SSASHGAGDMAW MAKRLLELN HDDSAYVIVA
Sbjct: 361 GKLEEAERVAMTMPFVPDEAVWRALLTSSASHGAGDMAWKMAKRLLELNLHDDSAYVIVA 420
Query: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
NALS+TARWEEVAVVRK+MKER VKKKSGRSWIEVRGEVHVFLAGDRNHER EE+ AKL+
Sbjct: 421 NALSATARWEEVAVVRKLMKERDVKKKSGRSWIEVRGEVHVFLAGDRNHERAEELNAKLK 480
Query: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
L+ EIEKLGYVPI E+L EVGEKEKKEAL YHSEKLALAYG+L G A PGKALRIVKN
Sbjct: 481 ELVGEIEKLGYVPICGEVLQEVGEKEKKEALLYHSEKLALAYGILTGVALPGKALRIVKN 540
Query: 541 LRICRDCHQVFKYASRVLGREIVARD 567
LRICRDCHQ FKYASRVL +EI+ RD
Sbjct: 541 LRICRDCHQFFKYASRVLKKEIIVRD 565
BLAST of Carg06246 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 355.1 bits (910), Expect = 1.3e-97
Identity = 200/554 (36.10%), Postives = 329/554 (59.39%), Query Frame = 0
Query: 17 LAAATVAAAGKSDPRIIHAQAIK-SPATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPN 76
L AA+ G S + +H AIK + +D V LI Y + + + LF++ +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-D 482
Query: 77 VVSWTALISAHSNT---FLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHS 136
+V+W A+++ ++ + L+ F M + + TLA++FKTC L ++ G +H+
Sbjct: 483 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 542
Query: 137 LAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSID 196
A K + + S +++ Y K A+ FD I D+V ++ ++ G +N +
Sbjct: 543 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 602
Query: 197 ALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLID 256
A VF +M+ V ++++ +A++ L ALEQ R +H +A+ + D V TSL+D
Sbjct: 603 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 662
Query: 257 GYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEY 316
Y K G I DA +F+ + MN+ WNAML AQ G+ TL+LF M S G+ PD+
Sbjct: 663 MYAKCGSIDDAYCLFKR-IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 722
Query: 317 TFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMT 376
TF+ +L++ +S LV E +R M +YG++P +EH++CL DA+GRAG +++AE + +
Sbjct: 723 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 782
Query: 377 MPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEV 436
M A+++R LL++ G + +A +LLEL P D SAYV+++N ++ ++W+E+
Sbjct: 783 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 842
Query: 437 AVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYV 496
+ R MMK +VKK G SWIEV+ ++H+F+ DR++ +TE IY K++++I +I++ GYV
Sbjct: 843 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 902
Query: 497 PIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFK 556
P L +V E+EK+ AL+YHSEKLA+A+G+L + PP +R++KNLR+C DCH K
Sbjct: 903 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLL--STPPSTPIRVIKNLRVCGDCHNAMK 962
Query: 557 YASRVLGREIVARD 567
Y ++V REIV RD
Sbjct: 963 YIAKVYNREIVLRD 972
BLAST of Carg06246 vs. TAIR 10
Match:
AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 330.9 bits (847), Expect = 2.6e-90
Identity = 193/540 (35.74%), Postives = 303/540 (56.11%), Query Frame = 0
Query: 31 RIIHAQAIKSP-ATDRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISA---H 90
RI+HA ++S D + N L+ +Y K L + ++F+++P + V+WT LIS H
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 91 SNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCG 150
AL F MLR+ PN+ TL+S+ K A+ G LH K S G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 151 SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVA 210
SAL++ Y++ L DDA+ VFD + ++V ++AL+ G A+ + + AL +F+ M
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 211 STMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQV 270
+ +S + A + LEQ + +H + + G +L+D Y KSG I DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 271 FEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRL 330
F+ L +VV WN++L +YAQ G + F M G+ P+E +FL++LT+ +S L
Sbjct: 320 FDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 379
Query: 331 VGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALL 390
+ E + M+ + G+ P H+ ++D +GRAG L A R MP P AA+W+ALL
Sbjct: 380 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 439
Query: 391 SSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKK 450
++ H ++ A+ + EL+P D +VI+ N +S RW + A VRK MKE VKK
Sbjct: 440 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 499
Query: 451 KSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKE 510
+ SW+E+ +H+F+A D H + EEI K ++ +I++LGYVP + ++ V ++E
Sbjct: 500 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 559
Query: 511 KKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
++ L YHSEK+ALA+ +L PPG + I KN+R+C DCH K AS+V+GREI+ RD
Sbjct: 560 REVNLQYHSEKIALAFALL--NTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 615
BLAST of Carg06246 vs. TAIR 10
Match:
AT5G52630.1 (mitochondrial RNAediting factor 1 )
HSP 1 Score: 322.0 bits (824), Expect = 1.2e-87
Identity = 187/523 (35.76%), Postives = 295/523 (56.41%), Query Frame = 0
Query: 47 VYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNT---FLALRHFVSMLRYP 106
V NNLI Y K+ L S R F+ P + +W+++IS + +++L M+
Sbjct: 52 VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111
Query: 107 SFPNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDAR 166
P+ L S K+CA L G S+H L+ K ++ F GS+LV+ Y+K AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 167 KVFDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLA 226
K+FDE+ + V +S ++ G AQ ++ +AL +F+E +A YS S + A+
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 227 ALEQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAML 286
LE R +HG ++ D+ V +SL+ Y K G+ A QVF E + N+ WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291
Query: 287 ASYAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGV 346
+YAQ +ELF M G+ P+ TFL +L + ++ LV E + +M+ E +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRI 351
Query: 347 QPTLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAK 406
+PT +H+ L+D +GRAG+L+EA + MP P +VW ALL+S H ++A A
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411
Query: 407 RLLELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFL 466
++ EL P ++ ++NA ++ R+E+ A RK++++R KK++G SW+E R +VH F
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471
Query: 467 AGDRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYG 526
AG+R HE+++EIY KL L E+EK GY+ + +L EV EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531
Query: 527 VLVGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
++ P + +R++KNLR+C DCH K+ S R I+ RD
Sbjct: 532 LI--TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRD 570
BLAST of Carg06246 vs. TAIR 10
Match:
AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 319.3 bits (817), Expect = 7.7e-87
Identity = 190/521 (36.47%), Postives = 302/521 (57.97%), Query Frame = 0
Query: 49 NNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSNTFL---ALRHFVSMLRYPSF 108
N LI +Y K NLL+ + +LFDQ+P NV+SWT +ISA+S + AL V MLR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 109 PNQRTLASLFKTCASLPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKV 168
PN T +S+ ++C + V LH K L S+ F SAL++ ++K +DA V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 219
Query: 169 FDEISDTDEVCYSALVVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAAL 228
FDE+ D + +++++ G AQN++S AL +F+ MK + + +++ LRA LA L
Sbjct: 220 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 279
Query: 229 EQCRVLHGHAVVVGLDTDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLAS 288
E H H +V D D+I+ +L+D Y K G + DA +VF + + +V+ W+ M++
Sbjct: 280 ELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ-MKERDVITWSTMISG 339
Query: 289 YAQQGDKNSTLELFNSMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQP 348
AQ G L+LF M S G P+ T + +L + ++ L+ + + R M+ YG+ P
Sbjct: 340 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 399
Query: 349 TLEHFTCLIDAMGRAGKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRL 408
EH+ C+ID +G+AGKL++A ++ M PDA WR LL + +A AK++
Sbjct: 400 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 459
Query: 409 LELNPHDDSAYVIVANALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAG 468
+ L+P D Y +++N +++ +W+ V +R M++R +KK+ G SWIEV ++H F+ G
Sbjct: 460 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 519
Query: 469 DRNHERTEEIYAKLRNLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVL 528
D +H + E+ KL LI + +GYVP +L ++ ++ +++L +HSEKLALA+G++
Sbjct: 520 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 579
Query: 529 VGAAPPGKALRIVKNLRICRDCHQVFKYASRVLGREIVARD 567
P K +RI KNLRIC DCH K AS++ R IV RD
Sbjct: 580 --TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRD 612
BLAST of Carg06246 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 315.1 bits (806), Expect = 1.4e-85
Identity = 192/564 (34.04%), Postives = 302/564 (53.55%), Query Frame = 0
Query: 44 DRSVYNNLITLYGKANLLHYSVRLFDQIPLPNVVSWTALISAHSN---TFLALRHFVSML 103
D S +N +I L+ + + ++ F+Q+ ++V+W ++IS + AL F ML
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 104 RYPSF-PNQRTLASLFKTCASLPCVSFGLSLHS-------------LAHKLSLCSEPFCG 163
R P++ TLAS+ CA+L + G +HS L +S+ S CG
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR--CG 330
Query: 164 ----------------------SALVNFYSKSHLFDDARKVFDEISDTDEVCYSALVVGL 223
+AL++ Y K + A+ +F + D D V ++A++VG
Sbjct: 331 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 390
Query: 224 AQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLDTDV 283
Q+ +A+++FR M Y+++ L A+ LA+L + +HG AV G V
Sbjct: 391 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 450
Query: 284 IVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMVS 343
V +LI Y K+G I A + F+ + V W +M+ + AQ G LELF +M+
Sbjct: 451 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 510
Query: 344 FGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAGKLE 403
GL PD T++ + ++ ++ LV + + M+ + PTL H+ C++D GRAG L+
Sbjct: 511 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 570
Query: 404 EAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVANALS 463
EA+ MP PD W +LLS+ H D+ A+RLL L P + AY +AN S
Sbjct: 571 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 630
Query: 464 STARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRNLIW 523
+ +WEE A +RK MK+ +VKK+ G SWIEV+ +VHVF D H EIY ++ +
Sbjct: 631 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 690
Query: 524 EIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNLRIC 569
EI+K+GYVP A +LH++ E+ K++ L +HSEKLA+A+G++ + P LRI+KNLR+C
Sbjct: 691 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLI--STPDKTTLRIMKNLRVC 750
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7028802.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6597338.1 | 0.0e+00 | 99.82 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022947552.1 | 0.0e+00 | 98.94 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata] | [more] |
XP_023540846.1 | 0.0e+00 | 98.94 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp... | [more] |
XP_022974509.1 | 0.0e+00 | 98.06 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9SMZ2 | 1.8e-96 | 36.10 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
Q9LIQ7 | 3.6e-89 | 35.74 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Q9LTF4 | 1.7e-86 | 35.76 | Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... | [more] |
Q9SI53 | 1.1e-85 | 36.47 | Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... | [more] |
Q9SHZ8 | 2.0e-84 | 34.04 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G6S2 | 0.0e+00 | 98.94 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata... | [more] |
A0A6J1IHT2 | 0.0e+00 | 98.06 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima O... | [more] |
A0A6J1DUT1 | 1.9e-279 | 86.44 | pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charanti... | [more] |
A0A5A7U1J3 | 2.1e-262 | 81.98 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3AX28 | 2.1e-262 | 81.98 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT4G33170.1 | 1.3e-97 | 36.10 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G24000.1 | 2.6e-90 | 35.74 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G52630.1 | 1.2e-87 | 35.76 | mitochondrial RNAediting factor 1 | [more] |
AT2G03880.1 | 7.7e-87 | 36.47 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G22070.1 | 1.4e-85 | 34.04 | pentatricopeptide (PPR) repeat-containing protein | [more] |