Carg06237 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06237
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	multiple organellar RNA editing factor 2, chloroplastic-like
Location	Carg_Chr06: 8372857 .. 8375183 (+)
RNA-Seq Expression	Carg06237
Synteny	Carg06237

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTTACAACATTGCCTTCTGCTATTAAAACCCTCGAATCCTCCTCCTTGCAGCATTTCTCCATCGCTGTAAACCCTTTCACGGTCGCCTTCTATGGCGTCATCCCTTCTTCGTGTTATGGCTTCCGCCTCCGCCTCCTCCGCTCGCCTCCCTCTTGCTCATAAACGCCTCTTCTCCGCCTCCAAATCTCTTACACGTCTTCCTTCTCCTCCATCTCTCACTCTCGCTCGTCGATCTCTTCCTCTGCTTTCCCATGCCGTTCGATCCACACCGTGCGCCCCCTGGCTTACTTCGATTCGTTGCCGTGTTAATCGGTCTGGTAACTCCGGTTACGCGCCTCTTAACTCAAACTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCATTGGCTCATCGTGATGGACAAGCCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAAGTTCTTGGCAGGTACTTGGAAGGATATAATGTTTTTTTCTTCTAAATTTGGTTTCGTGTTTTCGCTGATTTCGGCTGTGTTCTGTGATCTGAACAGTGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCCTGCGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAATAAGCTTGAGGGTATGTGTTATGATCTTTAAATTTCTTCTTCATGTGCCCTAACATACAGGCCGTCGTTTCCTTTCTCGCACTCTAGTAATTTATGTGGCATTTATACTTATCATATTTATATTGTGAAGCTTGTATCTAATGATTTTTGTTTGAATCTTTGCGAACAGGCTTGCCCGGTGTTCTCTTTGTTCTTCCTGATTCTTACGTCGACCCTGAGTATAAAGACTATGGGGGTAAGCATATGATGCTTTAAATGTTTTATTTTTCGCTGTTCATTAAAGACCCAATCAAATAATTCTTGACAGACAATGACATTGATATCTGGGAGGTTCATCTTGGCCAAGTCGCTTTCAAGAAGTTGTTTGCTTTAGAGATGAAACATGATTTGTGTTTATATCATTCGTAGATTTGCATTCTGGCTAACCATCCTTGATATTAGGTTCACATTTTATAAATATGCTCATGATAGCTTAAGAAATGCGAGAGACATGATTTTGGACTTAAATAAGATAAGCTATGATAGAGTCCATATTGGCAAAGCTAAATCAGCCTTTTAGCAATGTTTAGTTTTGAATGCTAATGGACTCAAATGTCACTCTTAACTGTTCTGAGCTTTGTATGTATAGTGGAGTTTCGGATCAGTAGAGATGAAACATTAGCTTTGCTTATTTGTTAAATTCATTTTAAGTGTATAGTCCATCTTGGCAAACCTAAATTAGTCTTTCAGACAATGTTTAGTTTTGAATGCTAATGGACTTACAACAAATGTCTCTCGAAACTGTTCTGTGCTCTTTTGACCTTGTGGAGATGCAGATCAGTAGAGATGAAACATTAATGCATTTTATAACTTTTCAAAGTCCATCTTTGCAATGCCTGATTTTGAGTCCTGATAAGTTATGCCAATCAGCTTTCTTTAATCCCATATAGTAGTTGAAGATTGAAATTAAAAGAGAGTGCTCTTACATCAGTTTACAGATTGAATGCGTGTATAGTTCATCTTGGCAAACCTAAATTAGTCTTTTGGACAATGTTTAGTTTTGAATGCTAATGAACTTACAACAAATGTCTCTCGAAACTGTTCTGTTCTCTTTATACCTTGTGGAGATACAGATCAGTAGAGATGAAACATGAAGACTTGCTTACTATGTTTTGTAGTCGGTCTTTGCAATATACTTCTCAGTGTGAAATAAAAAGGGTTTTTTTTTGTGGCGGTCGCAGCTGAGTTGTTCGTGAATGGTGAAATTGTTCAAAGGTCACCAGAGAGACAGAAAAGGGTGGAGCCACAGCCTCAAAGAGCTCAAGATAGACCGAGGTATAATGATCGGACCCGGTATGTTAGGCGCAGAGAAAACATGAGGTGAGGCATTTGAGAAGTGAGAATATGTGCATATGATGAGTAGAAAGAAGGGGGAAGACAAAATTGGAAAATTTATAGTGATTAGAAAGAATGAATAAAATGAAGTTGATGTTTTGTCTGTAATCTCCATTCTGGTATGTAATAGATCAGAATCATGGCGTTTTTAGGAGGTGGTAATTTTTGTTGTTAACTTGTTGCCTTTGGTGAACATCATTGACAAACTCGATATGGTTCTTTATAGTTTTCCTACTCATCTTTATTTTTTAGTAATATGATTATCA

mRNA sequence

ATGACCTTACAACATTGCCTTCTGCTATTAAAACCCTCGAATCCTCCTCCTTGCAGCATTTCTCCATCGCTGTAAACCCTTTCACGGTCGCCTTCTATGGCGTCATCCCTTCTTCGTGTTATGGCTTCCGCCTCCGCCTCCTCCGCTCGCCTCCCTCTTGCTCATAAACGCCTCTTCTCCGCCTCCAAATCTCTTACACGTCTTCCTTCTCCTCCATCTCTCACTCTCGCTCGTCGATCTCTTCCTCTGCTTTCCCATGCCGTTCGATCCACACCGTGCGCCCCCTGGCTTACTTCGATTCGTTGCCGTGTTAATCGGTCTGGTAACTCCGGTTACGCGCCTCTTAACTCAAACTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCATTGGCTCATCGTGATGGACAAGCCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAAGTTCTTGGCAGTGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCCTGCGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAATAAGCTTGAGGGCTTGCCCGGTGTTCTCTTTGTTCTTCCTGATTCTTACGTCGACCCTGAGTATAAAGACTATGGGGCTGAGTTGTTCGTGAATGGTGAAATTGTTCAAAGGTCACCAGAGAGACAGAAAAGGGTGGAGCCACAGCCTCAAAGAGCTCAAGATAGACCGAGGTATAATGATCGGACCCGGTATGTTAGGCGCAGAGAAAACATGAGGTGAGGCATTTGAGAAGTGAGAATATGTGCATATGATGAGTAGAAAGAAGGGGGAAGACAAAATTGGAAAATTTATAGTGATTAGAAAGAATGAATAAAATGAAGTTGATGTTTTGTCTGTAATCTCCATTCTGGTATGTAATAGATCAGAATCATGGCGTTTTTAGGAGGTGGTAATTTTTGTTGTTAACTTGTTGCCTTTGGTGAACATCATTGACAAACTCGATATGGTTCTTTATAGTTTTCCTACTCATCTTTATTTTTTAGTAATATGATTATCA

Coding sequence (CDS)

ATGGCGTCATCCCTTCTTCGTGTTATGGCTTCCGCCTCCGCCTCCTCCGCTCGCCTCCCTCTTGCTCATAAACGCCTCTTCTCCGCCTCCAAATCTCTTACACGTCTTCCTTCTCCTCCATCTCTCACTCTCGCTCGTCGATCTCTTCCTCTGCTTTCCCATGCCGTTCGATCCACACCGTGCGCCCCCTGGCTTACTTCGATTCGTTGCCGTGTTAATCGGTCTGGTAACTCCGGTTACGCGCCTCTTAACTCAAACTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCATTGGCTCATCGTGATGGACAAGCCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAAGTTCTTGGCAGTGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCCTGCGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAATAAGCTTGAGGGCTTGCCCGGTGTTCTCTTTGTTCTTCCTGATTCTTACGTCGACCCTGAGTATAAAGACTATGGGGCTGAGTTGTTCGTGAATGGTGAAATTGTTCAAAGGTCACCAGAGAGACAGAAAAGGGTGGAGCCACAGCCTCAAAGAGCTCAAGATAGACCGAGGTATAATGATCGGACCCGGTATGTTAGGCGCAGAGAAAACATGAGGTGA

Protein sequence

MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENMR

Homology

[Close]

BLAST of Carg06237 vs. NCBI nr
Match: KAG7028811.1 (Multiple organellar RNA editing factor 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 477.6 bits (1228), Expect = 6.2e-131
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60
           MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP
Sbjct: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60

Query: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM
Sbjct: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240

Query: 241 R 242
           R
Sbjct: 241 R 241

[Close]

BLAST of Carg06237 vs. NCBI nr
Match: KAG6597347.1 (Multiple organellar RNA editing factor 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60
           MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP
Sbjct: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60

Query: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM
Sbjct: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240

[Close]

BLAST of Carg06237 vs. NCBI nr
Match: XP_022948906.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 473.8 bits (1218), Expect = 8.9e-130
Identity = 239/241 (99.17%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60
           MA SLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP
Sbjct: 1   MALSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60

Query: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ASKQQMI+CYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ASKQQMIECYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM
Sbjct: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240

Query: 241 R 242
           R
Sbjct: 241 R 241

[Close]

BLAST of Carg06237 vs. NCBI nr
Match: XP_023538940.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467.6 bits (1202), Expect = 6.4e-128
Identity = 239/243 (98.35%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MASSLLRVM--ASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRS 60
           MA SLLRVM  ASASASSARLPLAHKRLFSASKSLTR PSPPSLTLARRSLPLLSHAVRS
Sbjct: 1   MALSLLRVMASASASASSARLPLAHKRLFSASKSLTRPPSPPSLTLARRSLPLLSHAVRS 60

Query: 61  TPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           TPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  TPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180
           EGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL
Sbjct: 121 EGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE 240

Query: 241 NMR 242
           NMR
Sbjct: 241 NMR 243

[Close]

BLAST of Carg06237 vs. NCBI nr
Match: XP_022149612.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charantia])

HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-113
Identity = 215/243 (88.48%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 1   MASSLLRVMASASA--SSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRS 60
           MA SLLR MASASA  S+ARL L  KRL S+S +LTR PSPP+LTL RRSLP LSHAVRS
Sbjct: 1   MALSLLRAMASASASTSTARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVRS 60

Query: 61  TPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120
            P A   T IRCRVNRSGNSGY+PLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180
           EGA+KQQMIDCY+QTLAKV+GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEG+PGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240

Query: 241 NMR 242
           NMR
Sbjct: 241 NMR 243

[Close]

BLAST of Carg06237 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.2e-88
Identity = 168/215 (78.14%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 28  SASKSLTRLPSPPSLTLARRSLPLLSHAVRS-TPCAPWLTSIRCRVNRSGNSGYAPLNSN 87
           S ++ LTR        +A   +P   H   S   C+    SIRC  NRSG S Y+PLNS 
Sbjct: 6   SGTRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRFFSIRCGANRSG-STYSPLNSG 65

Query: 88  SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKK 147
           SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGA+KQQMIDCY+QTLAKV+GSEEEAKK
Sbjct: 66  SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKK 125

Query: 148 KIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQR 207
           +IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNGEIVQR
Sbjct: 126 RIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQR 185

Query: 208 SPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           SPERQ+RVEPQPQRAQDRPRYNDRTRY RRREN R
Sbjct: 186 SPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of Carg06237 vs. ExPASy Swiss-Prot
Match: Q9C7Y2 (Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF5 PE=1 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.4e-85
Identity = 165/219 (75.34%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 24  KRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTPCAPWLTSIRCRVNRSGNSGYAPL 83
           KRL S S + T  PS PS  L+RRS P+ SHAV         T+IR R++RSG S Y+PL
Sbjct: 15  KRLISTSGATT--PS-PSYILSRRSTPVFSHAVGFISSLNRFTTIRTRMDRSGGS-YSPL 74

Query: 84  NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEE 143
            S SNFSDR PTEMAPLFPGCDYEHWLIVMDKPGGE A+KQQMIDCYVQTLAK++GSEEE
Sbjct: 75  KSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEE 134

Query: 144 AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEI 203
           AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+LPDSYVD E KDYGAELFVNGEI
Sbjct: 135 AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELFVNGEI 194

Query: 204 VQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           VQR PERQ++ +E   QR  D+P+Y+D+TRYVRRRENMR
Sbjct: 195 VQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENMR 229

[Close]

BLAST of Carg06237 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.6e-84
Identity = 170/243 (69.96%), Postives = 190/243 (78.19%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSP-PSLTLARRSLPLLSHAVRST 60
           MA +L R  AS  A         KR FS S ++   PSP PS  ++RR  P + HAV   
Sbjct: 1   MAKTLSRSTASCVA---------KRFFSTSNAVAS-PSPLPSHLISRRFSPTIFHAVGYI 60

Query: 61  PCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGE 120
           P     T+IR R++RSG S Y+PL S SNFSDRPPTEMAPLFPGCDYEHWLIVM+KPGGE
Sbjct: 61  PALTRFTTIRTRMDRSGGS-YSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGE 120

Query: 121 GASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF 180
            A KQQMIDCYVQTLAK++GSEEEA+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF
Sbjct: 121 NAQKQQMIDCYVQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF 180

Query: 181 VLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRE 240
           VLPDSYVDPE+KDYGAELFVNGE+V R PERQ+R VE   QR  D+P+Y+DR R VRRRE
Sbjct: 181 VLPDSYVDPEFKDYGAELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRE 232

Query: 241 NMR 242
           NMR
Sbjct: 241 NMR 232

[Close]

BLAST of Carg06237 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 104/237 (43.88%), Postives = 139/237 (58.65%), Query Frame = 0


Query: 9   MASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRS-TPCAPWLTS 68
           MA  S       L +K L S++   +  P+  S   +R ++PL+     S T   P   S
Sbjct: 1   MALISTRRTLSTLLNKTLSSSTSYSSSFPTLSS--RSRFAMPLIEKVSSSRTSLGPCYIS 60

Query: 69  IRCRVNRSGNSGYAPLNSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQM 128
            R    ++  SGY+PLN  S N+S+RPP E   L  GCDYEHWLIVM+    +  ++++M
Sbjct: 61  TR---PKTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEEM 120

Query: 129 IDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYV 188
           I+ YV+TL  VLG EEEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+
Sbjct: 121 INSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYL 180

Query: 189 DPEYKDYGAELFVNGEIVQRSPER---QKRVEPQPQRAQDRPRYNDR--TRYVRRRE 239
           D   KDYG +L+V G+++ R   R   Q+   P+P     RPRY+ R  T  V RRE
Sbjct: 181 DVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

[Close]

BLAST of Carg06237 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.2e-33
Identity = 91/223 (40.81%), Postives = 136/223 (60.99%), Query Frame = 0


Query: 25  RLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTPCAPWLTSIRCRVNRSGNSGYAPLN 84
           R F++S  L +    P+ +L  RS PL+  A  S+     L S++    ++ +S     +
Sbjct: 24  RSFASSAPLAK---SPASSLLSRSRPLV--AAFSSVFRGGLVSVKGLSTQATSSSLN--D 83

Query: 85  SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEA 144
            N N+S+RPP E   L  GCD+EHWL+V++ P GE  ++ ++ID Y++TLA+++GSE+EA
Sbjct: 84  PNPNWSNRPPKETI-LLDGCDFEHWLVVVEPPQGE-PTRDEIIDSYIKTLAQIVGSEDEA 143

Query: 145 KKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIV 204
           + KIY+VS   Y+ FG  + E+ S+KL+ L  V +VLPDSY+D   KDYG E F++G+ V
Sbjct: 144 RMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAV 203

Query: 205 QRSPE------RQKRVEPQPQRAQDRPRYNDRTR-YVRRRENM 241
              P+      R      +  R  DRPR NDR+R + RRRENM
Sbjct: 204 PYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENM 237

[Close]

BLAST of Carg06237 vs. ExPASy TrEMBL
Match: A0A6J1GAI1 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452422 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.3e-130
Identity = 239/241 (99.17%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60
           MA SLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP
Sbjct: 1   MALSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60

Query: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ASKQQMI+CYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ASKQQMIECYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM
Sbjct: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240

Query: 241 R 242
           R
Sbjct: 241 R 241

[Close]

BLAST of Carg06237 vs. ExPASy TrEMBL
Match: A0A6J1D8H1 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111017993 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 9.7e-114
Identity = 215/243 (88.48%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 1   MASSLLRVMASASA--SSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRS 60
           MA SLLR MASASA  S+ARL L  KRL S+S +LTR PSPP+LTL RRSLP LSHAVRS
Sbjct: 1   MALSLLRAMASASASTSTARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVRS 60

Query: 61  TPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120
            P A   T IRCRVNRSGNSGY+PLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180
           EGA+KQQMIDCY+QTLAKV+GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEG+PGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240

Query: 241 NMR 242
           NMR
Sbjct: 241 NMR 243

[Close]

BLAST of Carg06237 vs. ExPASy TrEMBL
Match: A0A6J1E8X5 (multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431937 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 208/241 (86.31%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60
           MA S+LR M     S+ARL L H+RLFS+S +LT  PSPPSLTL RRSLP LSHAVRS P
Sbjct: 1   MALSVLRAM----GSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSNP 60

Query: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
            A   TSIRCRVNR+GNS Y+P NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  SASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           A+KQQMIDCY+QTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPE KDYGAELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTR+VRRRENM
Sbjct: 181 LPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRENM 237

Query: 241 R 242
           R
Sbjct: 241 R 237

[Close]

BLAST of Carg06237 vs. ExPASy TrEMBL
Match: A0A6J1IT23 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479115 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 205/241 (85.06%), Postives = 216/241 (89.63%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60
           MA S+LR M     S+ARL L H+RLFS+S +LT  PSPP LTL RRSLP LSH VRS P
Sbjct: 1   MALSVLRAM----GSTARLSLLHRRLFSSSTTLTHPPSPPFLTLCRRSLPPLSHVVRSNP 60

Query: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
            A   TSIRCRVNR+GNS Y+P NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  SASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           A+KQQMIDCY+QTLAKVLGSEEEA KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ATKQQMIDCYIQTLAKVLGSEEEAMKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPE KDYGAELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTR+VRRRENM
Sbjct: 181 LPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRENM 237

Query: 241 R 242
           R
Sbjct: 241 R 237

[Close]

BLAST of Carg06237 vs. ExPASy TrEMBL
Match: A0A5D3CZF4 (Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001860 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 197/242 (81.40%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MASSLLRVMASA--SASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRS 60
           M  SLLR MASA  S S+ARL +  +RLFS+S +LT  PSP S TL RRSLPLLSHAVRS
Sbjct: 1   MGLSLLRAMASASVSTSAARLSVLPRRLFSSSSTLTHPPSPSSFTLRRRSLPLLSHAVRS 60

Query: 61  TPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120
            P +   TS RC  +R GNS Y+PLNSNSNFS+RPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSSSRSTSFRCLSSRPGNSSYSPLNSNSNFSERPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180
           EGA+KQQMIDCY+QTLAKV+GSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAEL VNGEIVQRSPERQ+RV+PQPQRA DRP+Y DRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240

[Close]

BLAST of Carg06237 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 325.5 bits (833), Expect = 3.7e-89
Identity = 168/215 (78.14%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 28  SASKSLTRLPSPPSLTLARRSLPLLSHAVRS-TPCAPWLTSIRCRVNRSGNSGYAPLNSN 87
           S ++ LTR        +A   +P   H   S   C+    SIRC  NRSG S Y+PLNS 
Sbjct: 6   SGTRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRFFSIRCGANRSG-STYSPLNSG 65

Query: 88  SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKK 147
           SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGA+KQQMIDCY+QTLAKV+GSEEEAKK
Sbjct: 66  SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKK 125

Query: 148 KIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQR 207
           +IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNGEIVQR
Sbjct: 126 RIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQR 185

Query: 208 SPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           SPERQ+RVEPQPQRAQDRPRYNDRTRY RRREN R
Sbjct: 186 SPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of Carg06237 vs. TAIR 10
Match: AT1G32580.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 316.6 bits (810), Expect = 1.7e-86
Identity = 165/219 (75.34%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 24  KRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTPCAPWLTSIRCRVNRSGNSGYAPL 83
           KRL S S + T  PS PS  L+RRS P+ SHAV         T+IR R++RSG S Y+PL
Sbjct: 15  KRLISTSGATT--PS-PSYILSRRSTPVFSHAVGFISSLNRFTTIRTRMDRSGGS-YSPL 74

Query: 84  NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEE 143
            S SNFSDR PTEMAPLFPGCDYEHWLIVMDKPGGE A+KQQMIDCYVQTLAK++GSEEE
Sbjct: 75  KSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEE 134

Query: 144 AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEI 203
           AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+LPDSYVD E KDYGAELFVNGEI
Sbjct: 135 AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELFVNGEI 194

Query: 204 VQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           VQR PERQ++ +E   QR  D+P+Y+D+TRYVRRRENMR
Sbjct: 195 VQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENMR 229

[Close]

BLAST of Carg06237 vs. TAIR 10
Match: AT2G35240.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-85
Identity = 170/243 (69.96%), Postives = 190/243 (78.19%), Query Frame = 0


Query: 1   MASSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSP-PSLTLARRSLPLLSHAVRST 60
           MA +L R  AS  A         KR FS S ++   PSP PS  ++RR  P + HAV   
Sbjct: 1   MAKTLSRSTASCVA---------KRFFSTSNAVAS-PSPLPSHLISRRFSPTIFHAVGYI 60

Query: 61  PCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGE 120
           P     T+IR R++RSG S Y+PL S SNFSDRPPTEMAPLFPGCDYEHWLIVM+KPGGE
Sbjct: 61  PALTRFTTIRTRMDRSGGS-YSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGE 120

Query: 121 GASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF 180
            A KQQMIDCYVQTLAK++GSEEEA+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF
Sbjct: 121 NAQKQQMIDCYVQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF 180

Query: 181 VLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRE 240
           VLPDSYVDPE+KDYGAELFVNGE+V R PERQ+R VE   QR  D+P+Y+DR R VRRRE
Sbjct: 181 VLPDSYVDPEFKDYGAELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRE 232

Query: 241 NMR 242
           NMR
Sbjct: 241 NMR 232

[Close]

BLAST of Carg06237 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 104/237 (43.88%), Postives = 139/237 (58.65%), Query Frame = 0


Query: 9   MASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRS-TPCAPWLTS 68
           MA  S       L +K L S++   +  P+  S   +R ++PL+     S T   P   S
Sbjct: 1   MALISTRRTLSTLLNKTLSSSTSYSSSFPTLSS--RSRFAMPLIEKVSSSRTSLGPCYIS 60

Query: 69  IRCRVNRSGNSGYAPLNSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQM 128
            R    ++  SGY+PLN  S N+S+RPP E   L  GCDYEHWLIVM+    +  ++++M
Sbjct: 61  TR---PKTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEEM 120

Query: 129 IDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYV 188
           I+ YV+TL  VLG EEEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+
Sbjct: 121 INSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYL 180

Query: 189 DPEYKDYGAELFVNGEIVQRSPER---QKRVEPQPQRAQDRPRYNDR--TRYVRRRE 239
           D   KDYG +L+V G+++ R   R   Q+   P+P     RPRY+ R  T  V RRE
Sbjct: 181 DVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

[Close]

BLAST of Carg06237 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 146.0 bits (367), Expect = 4.0e-35
Identity = 103/237 (43.46%), Postives = 139/237 (58.65%), Query Frame = 0


Query: 9   MASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRS-TPCAPWLTS 68
           MA  S       L +K L S++   +  P+  S   +R ++PL+     S T   P   S
Sbjct: 1   MALISTRRTLSTLLNKTLSSSTSYSSSFPTLSS--RSRFAMPLIEKVSSSRTSLGPCYIS 60

Query: 69  IRCRVNRSGNSGYAPLNSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGASKQQM 128
            R    ++  SGY+PLN  S N+S+RPP E   L  GCDYEHWLIVM+    +  ++++M
Sbjct: 61  TR---PKTSGSGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEEM 120

Query: 129 IDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYV 188
           I+ YV+TL  VLG +EEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+
Sbjct: 121 INSYVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYL 180

Query: 189 DPEYKDYGAELFVNGEIVQRSPER---QKRVEPQPQRAQDRPRYNDR--TRYVRRRE 239
           D   KDYG +L+V G+++ R   R   Q+   P+P     RPRY+ R  T  V RRE
Sbjct: 181 DVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

The following BLAST results are available for this feature:

BLAST of Carg06237 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028811.1	6.2e-131	100.00	Multiple organellar RNA editing factor 2, chloroplastic [Cucurbita argyrosperma ...	[more]
KAG6597347.1	1.4e-130	100.00	Multiple organellar RNA editing factor 2, chloroplastic, partial [Cucurbita argy...	[more]
XP_022948906.1	8.9e-130	99.17	multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita moschata...	[more]
XP_023538940.1	6.4e-128	98.35	multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022149612.1	2.0e-113	88.48	multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charanti...	[more]

BLAST of Carg06237 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22793	5.2e-88	78.14	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9C7Y2	2.4e-85	75.34	Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabido...	[more]
O82169	2.6e-84	69.96	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q84JZ6	1.5e-34	43.88	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9LKA5	6.2e-33	40.81	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]

BLAST of Carg06237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAI1	4.3e-130	99.17	multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1D8H1	9.7e-114	88.48	multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charan...	[more]
A0A6J1E8X5	1.7e-110	86.31	multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucur...	[more]
A0A6J1IT23	1.2e-108	85.06	multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A5D3CZF4	1.8e-104	81.40	Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Carg06237 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33430.1	3.7e-89	78.14	differentiation and greening-like 1	[more]
AT1G32580.1	1.7e-86	75.34	plastid developmental protein DAG, putative	[more]
AT2G35240.1	1.9e-85	69.96	plastid developmental protein DAG, putative	[more]
AT3G06790.2	1.0e-35	43.88	plastid developmental protein DAG, putative	[more]
AT3G06790.1	4.0e-35	43.46	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 104..187 e-value: 1.5E-6 score: 30.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..241
None	No IPR available	PANTHER	PTHR31346:SF15	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2 CHLOROPLASTIC	coord: 9..241
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 9..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06237-RA	Carg06237-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005739	mitochondrion