Carg06194 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06194
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA-directed RNA polymerase V subunit 7-like
Location	Carg_Chr06: 8569540 .. 8571296 (+)
RNA-Seq Expression	Carg06194
Synteny	Carg06194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGAAAGTGGTGGCTGAAAAGGCAGATAGAGATGGTCTCAACTTCCAGAGGTACATTATGGCACGTCTATTAGAGAACTTATTGAAGGAGAGGGCCAGCAAAGACCATGGCTATTTTATTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGACAGTGCAAGAATAAATCTCAGTATGTTACATTCCCCATTACCTTTGGCTGCCGAACCTTTGTGCCTTCAGGGGGAGAAATCTTGCTTGGAGTTGTTCGTCACGTATTTCGTCGCGGATTGCTCCTAAAATGTGGACCGATCAACTACGTGTTTCTTTCATCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTAAGAATCCTGTGTTCTCAAGCAACGAATTCGCCACGATTCGAACCGAGAGCGCTGTACGGTTCAATGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAGCAACACACTTGGACCCATTTCATTGTCGGAAGCCGATGAGTTAGGCTTGCAAACTTAGAACAACACACAAATTTGGTAATGCCGATTTCTTCCCTTCTGCATCTTTCTGTTTGTTCTTACTTTTTGGCAAATGATAATTCATTTGAGTGTCTTGATTTAAGGACGTCCGAGGGCAGGATGCATTGAATCTTATTAGTTGGAGATGCTAGACAGTACTGTTCAATCCAAATATATCCCATATCAACTAATCAAGCTTTTGGTATTGAAGATCCAAACAGATGATGCCATATTTCCATATTTCCAATCACTGCTTTGGATGTCTATGTCTTACTATCTAACCCAGTTCCAGTTGTTGCTGTTGTTTTCGAATCAGATTCGTTGTAATCGACCTATGAAATAAGAACTTATTGTTCATCTCTACCTTTTAGAAATTGATGTATTGTAAAAAAATTAAATCTTTTTACAGCTTATTTGACAATTAAAATAGTCGTTGTTTCTATTTATTTCAATTTTAAAGATACATAATTTAAATAATTAATTTGGTGGAAAAATAAATTACCTTTTTTTTTTTTTTTTTTTTCAACTTTCACCGAATAGAAATTGTCATTAGAGTGGACCGATCATTTTGATTGGAGCTTGGGATCTTCCACTCTCGACAGTCATTACCAGCCTTGCTCCGGCCAAAATTTCCAGGCTTTTATCCCAATGTCGACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATATTTCTTGGCCTCATCTACCATCCCTTTTCCATGATTGTGTTCTTCCTTGTGTTTGTTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCATGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTTGCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGGTGATTACAGCGGCATCTGA

mRNA sequence

ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGAAAGTGGTGGCTGAAAAGGCAGATAGAGATGGTCTCAACTTCCAGAGGTACATTATGGCACGTCTATTAGAGAACTTATTGAAGGAGAGGGCCAGCAAAGACCATGGCTATTTTATTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGACAGTGCAAGAATAAATCTCAGTATGTTACATTCCCCATTACCTTTGGCTGCCGAACCTTTGTGCCTTCAGGGGGAGAAATCTTGCTTGGAGTTGTTCGTCACGTATTTCGTCGCGGATTGCTCCTAAAATGTGGACCGATCAACTACGTGTTTCTTTCATCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTAAGAATCCTGTGTTCTCAAGCAACGAATTCGCCACGATTCGAACCGAGAGCGCTGTACGGTTCAATGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAGCAACACACTTGGACCCATTTCATTGTCGGAAGCCGATGACTTGGGATCTTCCACTCTCGACAGTCATTACCAGCCTTGCTCCGGCCAAAATTTCCAGGCTTTTATCCCAATGTCGACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATATTTCTTGGCCTCATCTACCATCCCTTTTCCATGATTGTGTTCTTCCTTGTGTTTGTTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCATGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTTGCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGGTGATTACAGCGGCATCTGA

Coding sequence (CDS)

ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGAAAGTGGTGGCTGAAAAGGCAGATAGAGATGGTCTCAACTTCCAGAGGTACATTATGGCACGTCTATTAGAGAACTTATTGAAGGAGAGGGCCAGCAAAGACCATGGCTATTTTATTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGACAGTGCAAGAATAAATCTCAGTATGTTACATTCCCCATTACCTTTGGCTGCCGAACCTTTGTGCCTTCAGGGGGAGAAATCTTGCTTGGAGTTGTTCGTCACGTATTTCGTCGCGGATTGCTCCTAAAATGTGGACCGATCAACTACGTGTTTCTTTCATCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTAAGAATCCTGTGTTCTCAAGCAACGAATTCGCCACGATTCGAACCGAGAGCGCTGTACGGTTCAATGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAGCAACACACTTGGACCCATTTCATTGTCGGAAGCCGATGACTTGGGATCTTCCACTCTCGACAGTCATTACCAGCCTTGCTCCGGCCAAAATTTCCAGGCTTTTATCCCAATGTCGACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATATTTCTTGGCCTCATCTACCATCCCTTTTCCATGATTGTGTTCTTCCTTGTGTTTGTTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCATGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTTGCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGGTGATTACAGCGGCATCTGA

Protein sequence

MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSSTLDSHYQPCSGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI

Homology

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BLAST of Carg06194 vs. NCBI nr
Match: KAG7028853.1 (DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 753.8 bits (1945), Expect = 7.2e-214
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180

Query: 181 SLSEADDLGSSTLDSHYQPCSGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDP 240
           SLSEADDLGSSTLDSHYQPCSGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDP
Sbjct: 181 SLSEADDLGSSTLDSHYQPCSGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDP 240

Query: 241 LSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLY 300
           LSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLY
Sbjct: 241 LSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLY 300

Query: 301 FSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGT 360
           FSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGT
Sbjct: 301 FSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGT 360

Query: 361 EDALGDLQDPFGDTLLESPRGDYSGI 387
           EDALGDLQDPFGDTLLESPRGDYSGI
Sbjct: 361 EDALGDLQDPFGDTLLESPRGDYSGI 386

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BLAST of Carg06194 vs. NCBI nr
Match: KAG7018763.1 (DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558.9 bits (1439), Expect = 3.4e-155
Identity = 297/403 (73.70%), Postives = 335/403 (83.13%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDV+V  EK  RDG+N QRYI+  LLENLLKE+ASKDHGYF+AVTSLKSIGK
Sbjct: 76  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK 135

Query: 61  GQCKN--KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKM 120
           G+ KN  +SQ V+FPITF CRTF+P  GEIL GVVRH+FRRGLLLKCGPI YVFLS+RKM
Sbjct: 136 GEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKM 195

Query: 121 PTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLG 180
           PTYHYVGG+NPVFSS + ATI  +  VRF+VLGVRW+EKRGCIKKEFVMLASLEG+ +LG
Sbjct: 196 PTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLG 255

Query: 181 PISLSEADDL-----GSSTLDSHYQ--------PCSG---QNFQAFIPMSTAEFAVTFKE 240
           PIS S++D+      GS  +   +         P  G   ++FQ  +PMS AEFAVTFKE
Sbjct: 256 PISSSDSDEFDLEEGGSRGIFRFFAFLFFLTSLPFIGAPAKSFQGSMPMSAAEFAVTFKE 315

Query: 241 AGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYH 300
           AGRSVIATR PWREFLDP  LSLPSSLS+AT+R+SQNLTRFLSNYCL++LLL+ LGLIYH
Sbjct: 316 AGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYH 375

Query: 301 PFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLI 360
           PFSMIV FLVF AWF LYFSR+DP+RVFGF+L D VLVIILGL TGLALA  GVFVNVLI
Sbjct: 376 PFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLALA--GVFVNVLI 435

Query: 361 SLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSG 386
           SL IGA+VVCLHAAL+ TED LGDLQDPFGD LL+SPRGDYSG
Sbjct: 436 SLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSG 476

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BLAST of Carg06194 vs. NCBI nr
Match: XP_023538725.1 (DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 8.7e-103
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 5   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 64

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 65  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 124

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 125 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 184

Query: 181 SLSEADDLGSST 193
           SLSEAD+LG  T
Sbjct: 185 SLSEADELGLQT 196

[Close]

BLAST of Carg06194 vs. NCBI nr
Match: XP_023538723.1 (DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538724.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 8.7e-103
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 21  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 80

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 81  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 140

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 141 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 200

Query: 181 SLSEADDLGSST 193
           SLSEAD+LG  T
Sbjct: 201 SLSEADELGLQT 212

[Close]

BLAST of Carg06194 vs. NCBI nr
Match: XP_022935102.1 (DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita moschata] >XP_022935110.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita moschata] >XP_022935117.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita moschata] >XP_022974400.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita maxima] >XP_022974401.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita maxima] >XP_022974402.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita maxima] >XP_023521330.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita pepo subsp. pepo] >XP_023538726.1 DNA-directed RNA polymerase V subunit 7-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023538727.1 DNA-directed RNA polymerase V subunit 7-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023538728.1 DNA-directed RNA polymerase V subunit 7-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023538729.1 DNA-directed RNA polymerase V subunit 7-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 8.7e-103
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180

Query: 181 SLSEADDLGSST 193
           SLSEAD+LG  T
Sbjct: 181 SLSEADELGLQT 192

[Close]

BLAST of Carg06194 vs. ExPASy Swiss-Prot
Match: A6QRA1 (DNA-directed RNA polymerase V subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPE7 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-35
Identity = 76/181 (41.99%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MF +V+L  +V + AE  D  GL  +R I+  LLE    ++A+K+ GY++AVT+L  IG+
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYVAVTTLDKIGE 60

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           G+ +  +  V FP+ F   TF    GEI+ GVV  V + G+ ++CGPI  V+LS  KMP 
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           Y Y+ G+NP+F + + + I+ E+ VR  V+G++W+E    +++EF  LASLEG + LGP+
Sbjct: 121 YKYIPGENPIFMNEKTSRIQVETTVRVVVIGIKWME----VEREFQALASLEG-DYLGPL 176

Query: 181 S 182
           S
Sbjct: 181 S 176

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BLAST of Carg06194 vs. ExPASy Swiss-Prot
Match: Q6NML5 (DNA-directed RNA polymerase subunit 7-like protein OS=Arabidopsis thaliana OX=3702 GN=NRPB7L PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.2e-35
Identity = 76/199 (38.19%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICAKHL--NGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFL 120
            +  N       +++ +TFP++F CRTF+P+ G+IL G V+ V   G  ++ GP+ Y +L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVML 180
           S  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGSNTLGPISLSEADD 188
           A+LEG+ + GPISL+ +D+
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

[Close]

BLAST of Carg06194 vs. ExPASy Swiss-Prot
Match: Q8LE42 (DNA-directed RNA polymerase IV subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPD7 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-30
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MF +V+L  DV + AE  D  GL  QR I+ RLLE   KE+A+KD GY I  T L++IG+
Sbjct: 1   MFIKVKLPWDVTIPAEDMD-TGLMLQRAIVIRLLEAFSKEKATKDLGYLITPTILENIGE 60

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           G+ K ++  + FP+ F    F    GEI+ GVV  V + G+ LK GP   ++LS  KMP 
Sbjct: 61  GKIKEQTGEIQFPVVFNGICFKMFKGEIVHGVVHKVHKTGVFLKSGPYEIIYLSHMKMPG 120

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGP 180
           Y ++ G+NP F +   + I+  + VRF VL   W E     +K+F+ LAS++G N LGP
Sbjct: 121 YEFIPGENPFFMNQYMSRIQIGARVRFVVLDTEWRE----AEKDFMALASIDGDN-LGP 173

[Close]

BLAST of Carg06194 vs. ExPASy Swiss-Prot
Match: P93829 (PRA1 family protein D OS=Arabidopsis thaliana OX=3702 GN=PRA1D PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.0e-30
Identity = 76/174 (43.68%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 221 KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 280
           KE  +S+    RPW +FLD  + S PSS++DAT+R++QNLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 281 YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVLVIILGLATGLALALTGVFVN 340
             P +++ F  V +AWF LYF+R++P+ +FGF + D  V V+++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 341 VLISLAIGAMVVCLHAALKGTEDALG-DLQDPFGDTLLES------PRGDYSGI 387
            L ++  G +V+ LHAAL+GT+D +  DL+ P+G  L  S       RGDYSGI
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSGI 182

[Close]

BLAST of Carg06194 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 70/148 (47.30%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 221 KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 280
           K+  +S+I T RPWRE LD  +LSLP    +A + +  N++ F  NY L VL ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 281 YHPFSMIVFFLVFVAWFVLYFSRD--DPIRVFGFELGDFVLVIILGLATGLALALTGVFV 340
           YHP SMI F +VF+ W +LYFSRD  D I + G E+ D +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 341 NVLISLAIGAMVVCLHAALKGTEDALGD 367
           NVL+SL IG ++V  H A + T+D   D
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLD 184

[Close]

BLAST of Carg06194 vs. ExPASy TrEMBL
Match: A0A6J1IA58 (DNA-directed RNA polymerase V subunit 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473078 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.2e-103
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 21  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 80

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 81  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 140

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 141 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 200

Query: 181 SLSEADDLGSST 193
           SLSEAD+LG  T
Sbjct: 201 SLSEADELGLQT 212

[Close]

BLAST of Carg06194 vs. ExPASy TrEMBL
Match: A0A6J1IDV3 (DNA-directed RNA polymerase V subunit 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473078 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.2e-103
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180

Query: 181 SLSEADDLGSST 193
           SLSEAD+LG  T
Sbjct: 181 SLSEADELGLQT 192

[Close]

BLAST of Carg06194 vs. ExPASy TrEMBL
Match: A0A6J1F9M0 (DNA-directed RNA polymerase V subunit 7-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442060 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.2e-103
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 21  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 80

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 81  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 140

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 141 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 200

Query: 181 SLSEADDLGSST 193
           SLSEAD+LG  T
Sbjct: 201 SLSEADELGLQT 212

[Close]

BLAST of Carg06194 vs. ExPASy TrEMBL
Match: A0A6J1F4M9 (DNA-directed RNA polymerase V subunit 7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442060 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.2e-103
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK
Sbjct: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT
Sbjct: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI
Sbjct: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180

Query: 181 SLSEADDLGSST 193
           SLSEAD+LG  T
Sbjct: 181 SLSEADELGLQT 192

[Close]

BLAST of Carg06194 vs. ExPASy TrEMBL
Match: A0A6J1F4K5 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442098 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 211 MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLV 270
           MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLV
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLV 60

Query: 271 VLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLA 330
           VLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLA 120

Query: 331 LALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI 387
           LALTGVFVNVLISLAIGAMVVCLHAALKGTEDAL DLQDPFGDTLLESPRGDYSGI
Sbjct: 121 LALTGVFVNVLISLAIGAMVVCLHAALKGTEDALEDLQDPFGDTLLESPRGDYSGI 176

[Close]

BLAST of Carg06194 vs. TAIR 10
Match: AT4G14660.1 (RNA polymerase Rpb7-like, N-terminal domain )

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-36
Identity = 76/181 (41.99%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MF +V+L  +V + AE  D  GL  +R I+  LLE    ++A+K+ GY++AVT+L  IG+
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYVAVTTLDKIGE 60

Query: 61  GQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMPT 120
           G+ +  +  V FP+ F   TF    GEI+ GVV  V + G+ ++CGPI  V+LS  KMP 
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 121 YHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPI 180
           Y Y+ G+NP+F + + + I+ E+ VR  V+G++W+E    +++EF  LASLEG + LGP+
Sbjct: 121 YKYIPGENPIFMNEKTSRIQVETTVRVVVIGIKWME----VEREFQALASLEG-DYLGPL 176

Query: 181 S 182
           S
Sbjct: 181 S 176

[Close]

BLAST of Carg06194 vs. TAIR 10
Match: AT4G14520.1 (DNA-directed RNA polymerase II-related )

HSP 1 Score: 149.8 bits (377), Expect = 4.4e-36
Identity = 76/199 (38.19%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICAKHL--NGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFL 120
            +  N       +++ +TFP++F CRTF+P+ G+IL G V+ V   G  ++ GP+ Y +L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVML 180
           S  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGSNTLGPISLSEADD 188
           A+LEG+ + GPISL+ +D+
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

[Close]

BLAST of Carg06194 vs. TAIR 10
Match: AT4G14520.2 (DNA-directed RNA polymerase II-related )

HSP 1 Score: 149.8 bits (377), Expect = 4.4e-36
Identity = 76/199 (38.19%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICAKHL--NGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFL 120
            +  N       +++ +TFP++F CRTF+P+ G+IL G V+ V   G  ++ GP+ Y +L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVML 180
           S  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGSNTLGPISLSEADD 188
           A+LEG+ + GPISL+ +D+
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

[Close]

BLAST of Carg06194 vs. TAIR 10
Match: AT4G14520.3 (DNA-directed RNA polymerase II-related )

HSP 1 Score: 149.8 bits (377), Expect = 4.4e-36
Identity = 76/199 (38.19%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 1   MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGK 60
           MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG 
Sbjct: 1   MFSEVEMARDVAICAKHL--NGQSPHQPILCRLLQDLIHEKACREHGFYLGITALKSIGN 60

Query: 61  GQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFL 120
            +  N       +++ +TFP++F CRTF+P+ G+IL G V+ V   G  ++ GP+ Y +L
Sbjct: 61  NKNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLRYAYL 120

Query: 121 SSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVML 180
           S  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +L
Sbjct: 121 SLLKMPHYHYVHSPLSEDEKPHFQKDDLSKIAVGVVVRFQVLAVRFKERPHKRRNDYYVL 180

Query: 181 ASLEGSNTLGPISLSEADD 188
           A+LEG+ + GPISL+ +D+
Sbjct: 181 ATLEGNGSFGPISLTGSDE 197

[Close]

BLAST of Carg06194 vs. TAIR 10
Match: AT1G04260.1 (CAMV movement protein interacting protein 7 )

HSP 1 Score: 133.3 bits (334), Expect = 4.3e-31
Identity = 76/174 (43.68%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 221 KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 280
           KE  +S+    RPW +FLD  + S PSS++DAT+R++QNLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 281 YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVLVIILGLATGLALALTGVFVN 340
             P +++ F  V +AWF LYF+R++P+ +FGF + D  V V+++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 341 VLISLAIGAMVVCLHAALKGTEDALG-DLQDPFGDTLLES------PRGDYSGI 387
            L ++  G +V+ LHAAL+GT+D +  DL+ P+G  L  S       RGDYSGI
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSGI 182

The following BLAST results are available for this feature:

BLAST of Carg06194 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028853.1	7.2e-214	100.00	DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG7018763.1	3.4e-155	73.70	DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrospe...	[more]
XP_023538725.1	8.7e-103	98.44	DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita pepo subsp. p...	[more]
XP_023538723.1	8.7e-103	98.44	DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022935102.1	8.7e-103	98.44	DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita moschata] >XP...	[more]

BLAST of Carg06194 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6QRA1	1.6e-35	41.99	DNA-directed RNA polymerase V subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPE7...	[more]
Q6NML5	6.2e-35	38.19	DNA-directed RNA polymerase subunit 7-like protein OS=Arabidopsis thaliana OX=37...	[more]
Q8LE42	2.7e-30	42.46	DNA-directed RNA polymerase IV subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPD...	[more]
P93829	6.0e-30	43.68	PRA1 family protein D OS=Arabidopsis thaliana OX=3702 GN=PRA1D PE=1 SV=1	[more]
Q9FRR1	1.4e-26	47.30	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]

BLAST of Carg06194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA58	4.2e-103	98.44	DNA-directed RNA polymerase V subunit 7-like isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1IDV3	4.2e-103	98.44	DNA-directed RNA polymerase V subunit 7-like isoform X2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1F9M0	4.2e-103	98.44	DNA-directed RNA polymerase V subunit 7-like isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1F4M9	4.2e-103	98.44	DNA-directed RNA polymerase V subunit 7-like isoform X2 OS=Cucurbita moschata OX...	[more]
A0A6J1F4K5	3.0e-85	99.43	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442098 PE=3 SV=1	[more]

BLAST of Carg06194 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14660.1	1.2e-36	41.99	RNA polymerase Rpb7-like, N-terminal domain	[more]
AT4G14520.1	4.4e-36	38.19	DNA-directed RNA polymerase II-related	[more]
AT4G14520.2	4.4e-36	38.19	DNA-directed RNA polymerase II-related	[more]
AT4G14520.3	4.4e-36	38.19	DNA-directed RNA polymerase II-related	[more]
AT1G04260.1	4.3e-31	43.68	CAMV movement protein interacting protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 85..179 e-value: 1.4E-12 score: 49.3
None	No IPR available	PANTHER	PTHR12709:SF6	DNA-DIRECTED RNA POLYMERASE SUBUNIT 7-LIKE PROTEIN	coord: 1..188
IPR036898	RNA polymerase Rpb7-like, N-terminal domain superfamily	GENE3D	3.30.1490.120		coord: 1..83 e-value: 1.6E-12 score: 49.5
IPR036898	RNA polymerase Rpb7-like, N-terminal domain superfamily	SUPERFAMILY	88798	N-terminal, heterodimerisation domain of RBP7 (RpoE)	coord: 1..81
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 228..363 e-value: 1.8E-39 score: 134.7
IPR045113	RNA polymerase Rpb7-like	PANTHER	PTHR12709	DNA-DIRECTED RNA POLYMERASE II, III	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06194-RA	Carg06194-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0000730	DNA recombinase assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0042148	strand invasion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0000794	condensed nuclear chromosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003727	single-stranded RNA binding