Carg06084 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06084
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	5'-3' exonuclease
Location	Carg_Chr04: 21831397 .. 21834757 (+)
RNA-Seq Expression	Carg06084
Synteny	Carg06084

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTTCCAATTTTCCGCATCGTTTTTTGTTTCCTGATAGGACCCGTTCTAGAAATGGCTGAGGCGAGCGCCAACATAGGCCTTAATATTCCGCCATTTTTGAACTCTACTTCGCCTACTTCCTTGCCGTCGAGGACTCTGAAAGCCGCCGAGTCGGTAAGAACAACCAAAGCCAAACCATGGAGAACCAAGCCATTGAAGCTGAGTGTCTTCCCGGCATCTTCTCGTTCTACTTCTTCGGGTTTTAAGCAAGCAGAAGACGGAAAATTGGCACCAACAGTGGAAGCTGATAATCCAAGAAAGGGAAGGGTCTTTTTCCTGGACGTAAATCCTCTCTGTTATCAAGGCAGCAGACCTAGTTTGCACAATTTTGGTCGCTGGGTTTCCATCTTCTTCGAGGAAGTTAGCCGTAGTGATCCTGTTATTGCCGTAAGTGCCATTTTATCTATATTGCGTTTATTATCAATAACGGCGAGCGCATAAGCTGTCTGATTTTTTACACTTTTATACATACATACATACATACATACATACATACATATATATATATATATATATATATATACATACACGCTGCTTCGATTCTCGTGGATTCCGGTGCCGATGTCTGAACTTATTAATTTCTCTCTGACTGTCTGCTTGTAATTCGTTTATCTGTTTGATTGCGTGCTGCCATTTTTTGTGCTATCATACATGGCAACTTCAATCTACAAATTAACTGAGTGAGATGAAGTAAACATTATCTCATTGACTGATATCTGGAATGGGAATTACATACGGGGTTCAGTGATTTGATTGCCTTGATTATTTATAGTGACGCAACTTTGAAGATCTTGGAAATTTTTACTTGATGGAATTAAACTCTCAGTGATTGAAGTTGTTTTTAAATTGGTTTATGAAAAAATTGGTTAAAGGCCAGCAGTTGAGCCCAAATGTTTTTAGAACTGATAGACATCTGTTCAAATTCTTGATGATGAAAACAAGAGCATATCTCTATTTATTTTTTTAACATGGACCTTTTCTCATCGTTTAATTATACATGATTGTAATGTTGGCGAGGAGACTTGTGAAGGGACGTCCCATGATAGAGGGTCTTGAATTTCTGTCCAGAATTTATGAGTGATTTTCTTAATGACTTAAAACTTGGTTTTGTTCAAGCAGTACTTTCTAAGGCTTCTTTGTCATTTTCAAATTTGGAATGTCGAGTGACCGCGAGGTCTATTTGTTGCGTAAGCAACTGCTTGTGGCAATCACAAGATCAACTAATTGAGAATTAAATATGACCCCCTGCCTGCCCTCCAGTTGAATAACGTTTCTAGTGCAGGAAGAGAGGTAAAGATTTGGATTTCACTTGCTTTCATGCCGTTTTGGGCCCAATGCTTAGTGCAGTGAGCAAATGTTAAGATCACACCACCACCTCTTGGGCCTAGTGCTTGCTGCAGAAGTTCTGAGAAGGAGATCCTCATTTCTATTTGAAGTGTAAATATTGGAGTATAGTGATTCTTGCATTATTTTTTTGCTTTATAGTTGGAAAAAGTTAAGTTCGTTACTTAGGAGATGGATGTACACAACCACATATGGCTGCAATTCGATTTACTTTTCAATGTTGATTTGTGCATCAACTTTCTCTTAACTCTAGATACTCCATCCCTGCTAGCTTTGTAACTAAGGTATTATCATTCTCTTATTTGTACTGTCAAATAGCTAGAGATCTGTCTTCATGTGAGACTTGTTTTCATTGAATAGATTTTTCTTAATATAGCAAAAGGTTATCGGAATCAGTAGAATGCAATATTTCTCGAACTCACCAAATTAGTATTGGCTCCGCAGGTTATTGATGGGGAAGGAGGTAGTGAGCATCGCAGGCTGTTGCTACCCTCATATAAAGCACATCGGATAAAATTCACTAGACAATCATCTTCACAAAGATTTACAAAGGGAAATTCTGGAAGGTCATATCAAGTGATAAGAGATGCTCTCAGAAGCTGTAATGTGCCCGTAAGTGAATTTTGTCTAAATAGTTTGCGACATATTTGCAGAGTAGCTAATGTAAATTGCAGAAAGCTGCTACTATTCAGGACCAATGTGGTTGCTGTTTGAGTATTAAATTTCGAAGGGATGAATGTTCTGAATAATTAAGACTTATTTTTTTCATGCTAAGAAGCTATATCTTGCAGGTTATAAAGATCAAAGGTCACGAAGCAGATGACGTTGTCGCTACACTTGTGGAACAAGTTTTGCAGAGAGGGTTCCGGGCAGTAATAGCCTCTCCTGATAAAGATTTCAAGCAGTTGATTTCAGAAGATGTCCAACTCGTGATGCCTTTGCCAGAGCTCAACAGATGGTCCTTTTACACCTTAAAGCACTACCTTGCTCAGTATAACTGTGATCCGTGCTCTGACTTGAGTCTTAGTAAGTAGTGTCTGCAAACATAGAATGTAGAAACCATTTAGAAAGAGAAGCTCAGACATTTATACCATTTTCTTATCATAAAGTACACAACACGTGCAATCATTGACCAAAAGGAAATAAAATGAATATTGAAGTTTGATATAATGATTTATCGCATAGGATGCATAATGGGTGACGAGGTAGATGGCGTTCCGGGAATCCAGCACGTTGCTCCTGGATTTGGTCGAAAGACTGCAATGAAGCTCTTAAAGAAACATGGTTCTTTGGAGAATCTACTCAGTGCTGCTGCAGTAAGAACTGTGGGCAAACCATATGCACAAGATGCACTCACAAAGTATGCCGATTACCTCCGAACGAACTACAAAGTTCTAGCCTTAAGAAGGTAATTCCTTTGCCTTCATTTTCCCACTTAACCTTATGCGTGTCCTTGAATTGTAGCTAATTTCTTGACTACAGTTTAATGGCTTTTGGTCATATTTTTTAACAGAGATATCGATGTTCAATTTCGAGAAGAGTGGTTGGTTGACAGAGACCGACAAAATGATTCGACTATTTTATCTAAGTTTGTAGAAAACAATGACAGAAACTCACTTGCCGAACAACGAAACAAGTGTAAATCCCCCTCTGAATGAATACATACAGGTAAAACTAGCTTAGGCTTTGTTAGAATATGATTTTATGCTTGGAAATATTCATACCTGCTTACTGGTATTCTGCTAGGGTGAAAAGTGTGTTATTCCTTTTCTCCTGATACACTGTGGAATCAAAGCTAATCCATATGCAATAGAAGGGCTCACTGGGACATTCATTTGTGCAGGCAGAACGATGTGGTGAGATGATTAAAAGATGCTCATCCAACATGCTTTAATAAAATAGGTAACATTGATAGTGGATATGGATTTGGGCAATCCAATTTGAGGCCATAAAACTGTAGAATTCCTCTGTTTCC

mRNA sequence

ATATTTCCAATTTTCCGCATCGTTTTTTGTTTCCTGATAGGACCCGTTCTAGAAATGGCTGAGGCGAGCGCCAACATAGGCCTTAATATTCCGCCATTTTTGAACTCTACTTCGCCTACTTCCTTGCCGTCGAGGACTCTGAAAGCCGCCGAGTCGGTAAGAACAACCAAAGCCAAACCATGGAGAACCAAGCCATTGAAGCTGAGTGTCTTCCCGGCATCTTCTCGTTCTACTTCTTCGGGTTTTAAGCAAGCAGAAGACGGAAAATTGGCACCAACAGTGGAAGCTGATAATCCAAGAAAGGGAAGGGTCTTTTTCCTGGACGTAAATCCTCTCTGTTATCAAGGCAGCAGACCTAGTTTGCACAATTTTGGTCGCTGGGTTTCCATCTTCTTCGAGGAAGTTAGCCGTAGTGATCCTGTTATTGCCGTTATTGATGGGGAAGGAGGTAGTGAGCATCGCAGGCTGTTGCTACCCTCATATAAAGCACATCGGATAAAATTCACTAGACAATCATCTTCACAAAGATTTACAAAGGGAAATTCTGGAAGGTCATATCAAGTGATAAGAGATGCTCTCAGAAGCTGTAATGTGCCCGTTATAAAGATCAAAGGTCACGAAGCAGATGACGTTGTCGCTACACTTGTGGAACAAGTTTTGCAGAGAGGGTTCCGGGCAGTAATAGCCTCTCCTGATAAAGATTTCAAGCAGTTGATTTCAGAAGATGTCCAACTCGTGATGCCTTTGCCAGAGCTCAACAGATGGTCCTTTTACACCTTAAAGCACTACCTTGCTCAGTATAACTGTGATCCGTGCTCTGACTTGAGTCTTAGATGCATAATGGGTGACGAGGTAGATGGCGTTCCGGGAATCCAGCACGTTGCTCCTGGATTTGGTCGAAAGACTGCAATGAAGCTCTTAAAGAAACATGGTTCTTTGGAGAATCTACTCAGTGCTGCTGCAGTAAGAACTGTGGGCAAACCATATGCACAAGATGCACTCACAAAGTATGCCGATTACCTCCGAACGAACTACAAAGTTCTAGCCTTAAGAAGAGATATCGATGTTCAATTTCGAGAAGAGTGGTTGGTTGACAGAGACCGACAAAATGATTCGACTATTTTATCTAAGTTTGTAGAAAACAATGACAGAAACTCACTTGCCGAACAACGAAACAAGTGTAAATCCCCCTCTGAATGAATACATACAGGGTGAAAAGTGTGTTATTCCTTTTCTCCTGATACACTGTGGAATCAAAGCTAATCCATATGCAATAGAAGGGCTCACTGGGACATTCATTTGTGCAGGCAGAACGATGTGGTGAGATGATTAAAAGATGCTCATCCAACATGCTTTAATAAAATAGGTAACATTGATAGTGGATATGGATTTGGGCAATCCAATTTGAGGCCATAAAACTGTAGAATTCCTCTGTTTCC

Coding sequence (CDS)

ATGGCTGAGGCGAGCGCCAACATAGGCCTTAATATTCCGCCATTTTTGAACTCTACTTCGCCTACTTCCTTGCCGTCGAGGACTCTGAAAGCCGCCGAGTCGGTAAGAACAACCAAAGCCAAACCATGGAGAACCAAGCCATTGAAGCTGAGTGTCTTCCCGGCATCTTCTCGTTCTACTTCTTCGGGTTTTAAGCAAGCAGAAGACGGAAAATTGGCACCAACAGTGGAAGCTGATAATCCAAGAAAGGGAAGGGTCTTTTTCCTGGACGTAAATCCTCTCTGTTATCAAGGCAGCAGACCTAGTTTGCACAATTTTGGTCGCTGGGTTTCCATCTTCTTCGAGGAAGTTAGCCGTAGTGATCCTGTTATTGCCGTTATTGATGGGGAAGGAGGTAGTGAGCATCGCAGGCTGTTGCTACCCTCATATAAAGCACATCGGATAAAATTCACTAGACAATCATCTTCACAAAGATTTACAAAGGGAAATTCTGGAAGGTCATATCAAGTGATAAGAGATGCTCTCAGAAGCTGTAATGTGCCCGTTATAAAGATCAAAGGTCACGAAGCAGATGACGTTGTCGCTACACTTGTGGAACAAGTTTTGCAGAGAGGGTTCCGGGCAGTAATAGCCTCTCCTGATAAAGATTTCAAGCAGTTGATTTCAGAAGATGTCCAACTCGTGATGCCTTTGCCAGAGCTCAACAGATGGTCCTTTTACACCTTAAAGCACTACCTTGCTCAGTATAACTGTGATCCGTGCTCTGACTTGAGTCTTAGATGCATAATGGGTGACGAGGTAGATGGCGTTCCGGGAATCCAGCACGTTGCTCCTGGATTTGGTCGAAAGACTGCAATGAAGCTCTTAAAGAAACATGGTTCTTTGGAGAATCTACTCAGTGCTGCTGCAGTAAGAACTGTGGGCAAACCATATGCACAAGATGCACTCACAAAGTATGCCGATTACCTCCGAACGAACTACAAAGTTCTAGCCTTAAGAAGAGATATCGATGTTCAATTTCGAGAAGAGTGGTTGGTTGACAGAGACCGACAAAATGATTCGACTATTTTATCTAAGTTTGTAGAAAACAATGACAGAAACTCACTTGCCGAACAACGAAACAAGTGTAAATCCCCCTCTGAATGA

Protein sequence

MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRSTSSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRSDPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLSAAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKFVENNDRNSLAEQRNKCKSPSE

Homology

[Close]

BLAST of Carg06084 vs. NCBI nr
Match: KAG7033404.1 (hypothetical protein SDJN02_07460 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 761.1 bits (1964), Expect = 4.4e-216
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST
Sbjct: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
           SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS
Sbjct: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV
Sbjct: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360
           AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF
Sbjct: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360

Query: 361 VENNDRNSLAEQRNKCKSPSE 382
           VENNDRNSLAEQRNKCKSPSE
Sbjct: 361 VENNDRNSLAEQRNKCKSPSE 381

[Close]

BLAST of Carg06084 vs. NCBI nr
Match: XP_022961199.1 (uncharacterized protein LOC111461781 [Cucurbita moschata])

HSP 1 Score: 749.2 bits (1933), Expect = 1.7e-212
Identity = 376/381 (98.69%), Postives = 377/381 (98.95%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAK WRTKPLKLSVF ASSRST
Sbjct: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKSWRTKPLKLSVFAASSRST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
           SSGFKQAEDGKL PT+EADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS
Sbjct: 61  SSGFKQAEDGKLPPTMEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV
Sbjct: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360
           AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF
Sbjct: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360

Query: 361 VENNDRNSLAEQRNKCKSPSE 382
           VENNDRNSLAEQ NKCKSPSE
Sbjct: 361 VENNDRNSLAEQGNKCKSPSE 381

[Close]

BLAST of Carg06084 vs. NCBI nr
Match: XP_022990137.1 (uncharacterized protein LOC111487120 [Cucurbita maxima])

HSP 1 Score: 740.3 bits (1910), Expect = 8.1e-210
Identity = 369/381 (96.85%), Postives = 375/381 (98.43%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEASANIGLNIPPFLNS SPTSLPSRTLKAAESVRTTKAK WRTKPLKLSVF A+SRST
Sbjct: 1   MAEASANIGLNIPPFLNSASPTSLPSRTLKAAESVRTTKAKSWRTKPLKLSVFAAASRST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
           SSGFKQAEDGKL P +EADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVS S
Sbjct: 61  SSGFKQAEDGKLPPRMEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSHS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSC+V
Sbjct: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCDV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360
           AAA+RTVGKPYAQDALTKYADYLRTNYKVLALRRD+DVQFREEWLV+RDRQNDSTILSKF
Sbjct: 301 AAAIRTVGKPYAQDALTKYADYLRTNYKVLALRRDVDVQFREEWLVERDRQNDSTILSKF 360

Query: 361 VENNDRNSLAEQRNKCKSPSE 382
           VENNDRNSLAEQRNKCKSPSE
Sbjct: 361 VENNDRNSLAEQRNKCKSPSE 381

[Close]

BLAST of Carg06084 vs. NCBI nr
Match: XP_023542307.1 (uncharacterized protein LOC111802238 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 733.0 bits (1891), Expect = 1.3e-207
Identity = 364/381 (95.54%), Postives = 372/381 (97.64%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEASANIGLNIPPF NS SPTSLPSRTLKAAESVRTTKAK WRTKPLKLSVF ASSRST
Sbjct: 1   MAEASANIGLNIPPFFNSASPTSLPSRTLKAAESVRTTKAKSWRTKPLKLSVFAASSRST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
           SSGFKQAEDGKL P +EADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVS S
Sbjct: 61  SSGFKQAEDGKLPPRMEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSHS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAVIDGEGGSEHRRLLLPSYK+HRIKFTRQSSSQRFTKGNSGRSYQVI+DALRSCNV
Sbjct: 121 DPVIAVIDGEGGSEHRRLLLPSYKSHRIKFTRQSSSQRFTKGNSGRSYQVIKDALRSCNV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PVIKIKGHEADDVVATLVEQVLQRG RAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVIKIKGHEADDVVATLVEQVLQRGLRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TLKHY AQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLKHYFAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360
           AAA+RTVGKPYAQDALTKYADYLRTNYKVLALRRD+DVQFREEWLV+RDRQNDSTILSKF
Sbjct: 301 AAAIRTVGKPYAQDALTKYADYLRTNYKVLALRRDVDVQFREEWLVERDRQNDSTILSKF 360

Query: 361 VENNDRNSLAEQRNKCKSPSE 382
           VENND+NSLAEQ+NKCKSPSE
Sbjct: 361 VENNDKNSLAEQQNKCKSPSE 381

[Close]

BLAST of Carg06084 vs. NCBI nr
Match: KAG6602717.1 (hypothetical protein SDJN03_07950, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 671.0 bits (1730), Expect = 6.0e-189
Identity = 336/349 (96.28%), Postives = 339/349 (97.13%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEASAN+GLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVF ASSRST
Sbjct: 1   MAEASANLGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFAASSRST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
           SSGFKQAEDGKL PTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS
Sbjct: 61  SSGFKQAEDGKLPPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV
Sbjct: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRD 350
           AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDID    E  L + +
Sbjct: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDKTMTETHLPNNE 349

[Close]

BLAST of Carg06084 vs. ExPASy Swiss-Prot
Match: O67550 (5'-3' exonuclease OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1628 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.1e-23
Identity = 65/206 (31.55%), Postives = 120/206 (58.25%), Query Frame = 0


Query: 170 VIRDALRSCNVPVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVM 229
           VI++ L+   +P++++ G+EADDV+A L E+  Q+GF+  I SPDKD  QL+SE+V ++ 
Sbjct: 89  VIKEILKLAGIPLLELPGYEADDVIAYLAEKFSQKGFKVKIYSPDKDLLQLVSENVLVIN 148

Query: 230 PLPELNRWSFYTLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLL 289
           P+ +      +T +  + ++  +P        ++GD+VD VPGI+    G G KTA+ +L
Sbjct: 149 PMND----EVFTKERVIKKFGVEPQKIPDYLALVGDKVDNVPGIE----GVGPKTAINIL 208

Query: 290 KKHGSLENLLSAAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRD 349
           KK+GS+EN+L         + + ++      + L  +YK++ L  D+D++  EE L  + 
Sbjct: 209 KKYGSVENILKN------WEKFQREFPRAKKEDLELSYKLVKLYTDLDIELSEEDL--KI 268

Query: 350 RQNDSTILSKFVENNDRNSLAEQRNK 376
           ++ D   L + ++  +  SL ++ +K
Sbjct: 269 KRPDLNKLKQKLQELEMKSLLKEVDK 278

[Close]

BLAST of Carg06084 vs. ExPASy Swiss-Prot
Match: P52026 (DNA polymerase I OS=Geobacillus stearothermophilus OX=1422 GN=polA PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 5.6e-20
Identity = 70/286 (24.48%), Postives = 135/286 (47.20%), Query Frame = 0


Query: 83  KGRVFFLDVNPLCYQG--SRPSLHN---------FGRWVSIFFEEVSRSDPV-IAVIDGE 142
           K ++  +D N + Y+   + P LHN         +G +  +  + ++   P  I V    
Sbjct: 2   KNKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYG-FTMMLNKILAEEQPTHILVAFDA 61

Query: 143 GGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVIKIKGHEA 202
           G +  R      YK  R +   + S Q          + ++R+ L++  +P  ++  +EA
Sbjct: 62  GKTTFRHETFQDYKGGRQQTPPELSEQ----------FPLLRELLKAYRIPAYELDHYEA 121

Query: 203 DDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLKHYLAQYN 262
           DD++ T+  +  + GF   + S D+D  QL S  V + +    +     YT +  + +Y 
Sbjct: 122 DDIIGTMAARAEREGFAVKVISGDRDLTQLASPQVTVEITKKGITDIESYTPETVVEKYG 181

Query: 263 CDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLSAAAVRTVGKP 322
             P   + L+ +MGD+ D +PG+    PG G KTA+KLLK+ G++EN+L  A++  +   
Sbjct: 182 LTPEQIVDLKGLMGDKSDNIPGV----PGIGEKTAVKLLKQFGTVENVL--ASIDEIKGE 241

Query: 323 YAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTI 357
             ++ L +Y D    + ++ A+ RD  V+   + +V +    +  +
Sbjct: 242 KLKENLRQYRDLALLSKQLAAICRDAPVELTLDDIVYKGEDREKVV 270

[Close]

BLAST of Carg06084 vs. ExPASy Swiss-Prot
Match: Q9S1G2 (DNA polymerase I OS=Rhizobium leguminosarum OX=384 GN=polA PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.9e-18
Identity = 65/223 (29.15%), Postives = 107/223 (47.98%), Query Frame = 0


Query: 124 IAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVI 183
           +AVI        R+ L  +YKA+R     +   Q          + +IR+A R+ N+P I
Sbjct: 81  LAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQ----------FGLIREATRAFNLPCI 140

Query: 184 KIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLK 243
           + +G EADD++AT   Q    G    I S DKD  QL+S +V +   + +        + 
Sbjct: 141 ETEGFEADDIIATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQ----IGIP 200

Query: 244 HYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLSAAA 303
             + ++   P   + L+ + GD VD VPGI    PG G KTA +LL+++G L+ LL  A 
Sbjct: 201 DVIEKWGVPPEKMIDLQAMTGDSVDNVPGI----PGIGPKTAAQLLEEYGDLDTLLERAT 260

Query: 304 VRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLV 347
              + +   ++ +    D  R +  ++ LR D+ +    + LV
Sbjct: 261 --EIKQVKRRETILANIDMARLSRDLVRLRTDVPLDLDLDALV 283

[Close]

BLAST of Carg06084 vs. ExPASy Swiss-Prot
Match: Q9RLB6 (DNA polymerase I OS=Rickettsia helvetica OX=35789 GN=polA PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.5e-17
Identity = 57/218 (26.15%), Postives = 104/218 (47.71%), Query Frame = 0


Query: 124 IAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVI 183
           +AV+   GG   R  + P YKA+R         Q            ++RD   + N P++
Sbjct: 56  VAVVFDSGGKNFRHYIYPEYKANRPPPPEDLIVQ----------LPLVRDVASNLNFPIL 115

Query: 184 KIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLK 243
           +  G+EADD++AT   +    G   VI S DKD  QL+SE++++  PL    R  + T  
Sbjct: 116 EKNGYEADDIIATFATKTAALGENVVIISSDKDLLQLMSENIKIYDPL----RGKYITED 175

Query: 244 HYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLSAAA 303
             + ++         +  ++GD  D +PG+    P  G KTA  L+ + GS+EN+ +  +
Sbjct: 176 DVVKKFGTTSDKLREVMALIGDRSDNIPGV----PSIGPKTASSLITQFGSVENIFN--S 235

Query: 304 VRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFR 342
           +  V     ++ L    +    +++++ L  ++D+ F+
Sbjct: 236 LDQVSSVKQRETLQNSREAALISWQLIGLDSNVDLDFQ 253

[Close]

BLAST of Carg06084 vs. ExPASy Swiss-Prot
Match: Q92GB7 (DNA polymerase I OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=polA PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.4e-17
Identity = 55/218 (25.23%), Postives = 104/218 (47.71%), Query Frame = 0


Query: 124 IAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVI 183
           +AV+   GG   R  + P YKA+R         Q            ++RD   + N P++
Sbjct: 56  VAVVFDSGGKNFRHQIYPDYKANRPPPPEDLIIQ----------LPLVRDVASNLNFPIL 115

Query: 184 KIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLK 243
           +  G+EADD++AT   +    G   VI S DKD  QL++E++++  PL    +  + T  
Sbjct: 116 EKNGYEADDIIATFATKTAALGAHVVIISSDKDLLQLMTENIKIYDPL----KGKYITED 175

Query: 244 HYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLSAAA 303
             + ++         +  ++GD  D +PG+    P  G KTA  L+ + GS+EN+ +  +
Sbjct: 176 DVVKKFGTTSDKLREVMALIGDRSDNIPGV----PSIGPKTASSLITQFGSVENIFN--S 235

Query: 304 VRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFR 342
           +  V     ++ L    +    +++++ L  ++D+ F+
Sbjct: 236 LDQVSSVKQRETLQNSREAALISWQLIGLNSNVDLDFQ 253

[Close]

BLAST of Carg06084 vs. ExPASy TrEMBL
Match: A0A6J1HDC1 (uncharacterized protein LOC111461781 OS=Cucurbita moschata OX=3662 GN=LOC111461781 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 8.4e-213
Identity = 376/381 (98.69%), Postives = 377/381 (98.95%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAK WRTKPLKLSVF ASSRST
Sbjct: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKSWRTKPLKLSVFAASSRST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
           SSGFKQAEDGKL PT+EADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS
Sbjct: 61  SSGFKQAEDGKLPPTMEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV
Sbjct: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360
           AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF
Sbjct: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360

Query: 361 VENNDRNSLAEQRNKCKSPSE 382
           VENNDRNSLAEQ NKCKSPSE
Sbjct: 361 VENNDRNSLAEQGNKCKSPSE 381

[Close]

BLAST of Carg06084 vs. ExPASy TrEMBL
Match: A0A6J1JHT6 (uncharacterized protein LOC111487120 OS=Cucurbita maxima OX=3661 GN=LOC111487120 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 3.9e-210
Identity = 369/381 (96.85%), Postives = 375/381 (98.43%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEASANIGLNIPPFLNS SPTSLPSRTLKAAESVRTTKAK WRTKPLKLSVF A+SRST
Sbjct: 1   MAEASANIGLNIPPFLNSASPTSLPSRTLKAAESVRTTKAKSWRTKPLKLSVFAAASRST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
           SSGFKQAEDGKL P +EADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVS S
Sbjct: 61  SSGFKQAEDGKLPPRMEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSHS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSC+V
Sbjct: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCDV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360
           AAA+RTVGKPYAQDALTKYADYLRTNYKVLALRRD+DVQFREEWLV+RDRQNDSTILSKF
Sbjct: 301 AAAIRTVGKPYAQDALTKYADYLRTNYKVLALRRDVDVQFREEWLVERDRQNDSTILSKF 360

Query: 361 VENNDRNSLAEQRNKCKSPSE 382
           VENNDRNSLAEQRNKCKSPSE
Sbjct: 361 VENNDRNSLAEQRNKCKSPSE 381

[Close]

BLAST of Carg06084 vs. ExPASy TrEMBL
Match: A0A6J1DGI1 (uncharacterized protein LOC111020233 OS=Momordica charantia OX=3673 GN=LOC111020233 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.6e-182
Identity = 320/371 (86.25%), Postives = 341/371 (91.91%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRST 60
           MAEA ANIG+NIPPFLNS S +SLPSRTLK  ES  TTK+  WRTK L+LS FP +S ST
Sbjct: 1   MAEAGANIGVNIPPFLNSASRSSLPSRTLK-PESTLTTKSNSWRTKALQLSAFPVASHST 60

Query: 61  SSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRS 120
              FKQ + G L P +EADNPRKGRVFFLDVNPLCY+GSRPSLHNFGRW SIFFE+VS S
Sbjct: 61  ---FKQTDGGTLQPIIEADNPRKGRVFFLDVNPLCYEGSRPSLHNFGRWASIFFEQVSHS 120

Query: 121 DPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNV 180
           DPVIAV DGEGGSEHRRLLLPSYKAHRIKFTRQSSSQR+TKGNS R YQVIRDALR+CNV
Sbjct: 121 DPVIAVFDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRYTKGNSRRPYQVIRDALRNCNV 180

Query: 181 PVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240
           PV+K+ GHEADDVVATLV+QVLQRGFR VIASPDKDFKQLISEDVQLVMPLPELNRWSFY
Sbjct: 181 PVVKVDGHEADDVVATLVDQVLQRGFRVVIASPDKDFKQLISEDVQLVMPLPELNRWSFY 240

Query: 241 TLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300
           TL+HYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS
Sbjct: 241 TLRHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLS 300

Query: 301 AAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 360
           AAA+RTVG+PYAQDALTKYADYLRTNYKVLALRRD+DVQF+EEWLV+RDRQNDS ILSKF
Sbjct: 301 AAAIRTVGRPYAQDALTKYADYLRTNYKVLALRRDVDVQFQEEWLVERDRQNDSAILSKF 360

Query: 361 VENNDRNSLAE 372
           VENNDRNSL +
Sbjct: 361 VENNDRNSLVQ 367

[Close]

BLAST of Carg06084 vs. ExPASy TrEMBL
Match: A0A0A0LQN4 (53EXOc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G402050 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 5.2e-178
Identity = 312/373 (83.65%), Postives = 338/373 (90.62%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKP--WRTKPLKLSVFPASSR 60
           MAEASANIG+N PPFLNS+SPT LPSRTLK  E   T+K KP  WRTKPL L+ F  SSR
Sbjct: 1   MAEASANIGVNFPPFLNSSSPTFLPSRTLK-PEFPLTSKLKPNTWRTKPLNLTAFAPSSR 60

Query: 61  STSSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVS 120
            TS+ F Q +DGK  P +EADN R GRVFFLDVNPLCYQGS+PSL NFGRWVSIFFEEVS
Sbjct: 61  LTSAAFTQTDDGKFQPRIEADNSRTGRVFFLDVNPLCYQGSKPSLRNFGRWVSIFFEEVS 120

Query: 121 RSDPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSC 180
            SDPVIAV DGEGGSEHRRLLLPSYKAHRIKFTR  SS+RFTKGN   SYQVIRDALRSC
Sbjct: 121 HSDPVIAVFDGEGGSEHRRLLLPSYKAHRIKFTRPPSSKRFTKGNFRTSYQVIRDALRSC 180

Query: 181 NVPVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWS 240
           NVPV++++GHEADDV+ATLVEQVLQRG R V+ASPDKDFKQLISED+QLVMPLPELNRWS
Sbjct: 181 NVPVVRVEGHEADDVIATLVEQVLQRGVRVVVASPDKDFKQLISEDIQLVMPLPELNRWS 240

Query: 241 FYTLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENL 300
           FYTL+HYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTA+KLLKKHGSLENL
Sbjct: 241 FYTLRHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLENL 300

Query: 301 LSAAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILS 360
           LSAAA+RTVGKPYAQDALTKYA+YLRTNYKVLALRRD+DVQF++EWLV+RDR+NDSTILS
Sbjct: 301 LSAAAIRTVGKPYAQDALTKYAEYLRTNYKVLALRRDVDVQFQDEWLVERDRRNDSTILS 360

Query: 361 KFVENNDRNSLAE 372
           KFVENNDRN L +
Sbjct: 361 KFVENNDRNLLVQ 372

[Close]

BLAST of Carg06084 vs. ExPASy TrEMBL
Match: A0A1S3B2X7 (5'-3' exonuclease OS=Cucumis melo OX=3656 GN=LOC103485414 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 9.7e-177
Identity = 311/373 (83.38%), Postives = 334/373 (89.54%), Query Frame = 0


Query: 1   MAEASANIGLNIPPFLNSTSPTSLPSRTLKAAESVRTTKAKP--WRTKPLKLSVFPASSR 60
           M EASA IG+N PPFLNS+S T LPSRT        T+K KP  WRTKPLKL+ F  SSR
Sbjct: 1   MVEASAKIGVNFPPFLNSSSRTFLPSRT------ALTSKLKPNTWRTKPLKLTAFVPSSR 60

Query: 61  STSSGFKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVS 120
            TS+ F Q +DGK  P +EADNPRKGRVFFLDVNPLCYQG++PSL NFGRWVSIFFEEVS
Sbjct: 61  LTSAAFNQTDDGKFQPRIEADNPRKGRVFFLDVNPLCYQGNKPSLRNFGRWVSIFFEEVS 120

Query: 121 RSDPVIAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSC 180
            SDPVIAV DGEGGSEHRRLLLPSYKAHRIKFTR  SSQRFTKGN   SYQVIRDALRSC
Sbjct: 121 HSDPVIAVFDGEGGSEHRRLLLPSYKAHRIKFTRPPSSQRFTKGNFRTSYQVIRDALRSC 180

Query: 181 NVPVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWS 240
           NVPV+K+ GHEADDVVATLVEQVLQRG R V+ASPDKDFKQLISEDVQLVMPLPELNRWS
Sbjct: 181 NVPVVKVDGHEADDVVATLVEQVLQRGVRVVVASPDKDFKQLISEDVQLVMPLPELNRWS 240

Query: 241 FYTLKHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENL 300
           FYT++HYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTA+KLLKKHGSLENL
Sbjct: 241 FYTIRHYLAQYNCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLENL 300

Query: 301 LSAAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILS 360
           LSAAA+RTVGKPYAQDALTKYA+YLRTNYKVLALRRD+DVQF++EWLV+RDR+NDSTILS
Sbjct: 301 LSAAAIRTVGKPYAQDALTKYAEYLRTNYKVLALRRDVDVQFQDEWLVERDRRNDSTILS 360

Query: 361 KFVENNDRNSLAE 372
           KFVENNDRN L +
Sbjct: 361 KFVENNDRNLLVQ 367

[Close]

BLAST of Carg06084 vs. TAIR 10
Match: AT1G34380.2 (5'-3' exonuclease family protein )

HSP 1 Score: 409.8 bits (1052), Expect = 2.3e-114
Identity = 211/346 (60.98%), Postives = 259/346 (74.86%), Query Frame = 0


Query: 21  PTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRSTSSGFKQA------EDGKLAP 80
           P SL S + K+ +     K +P RTK +  S    SS S+   F +       +   L  
Sbjct: 9   PNSLFSFSTKSID-----KTQPSRTKWVSSSSSSFSSHSSVETFHRTGNVQVLQKDVLCG 68

Query: 81  TVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRSDPVIAVIDGEGGSE 140
             E    +  RVFFLDV+PLCY+G++PS   FG W+S+FF +VS +DPVIAVIDGE G++
Sbjct: 69  NNEEIRKKNKRVFFLDVSPLCYEGNKPSSQAFGHWISLFFSQVSLTDPVIAVIDGEEGNQ 128

Query: 141 HRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVIKIKGHEADDVV 200
            RR LLPSYKAHR    +  +  R++K    R +Q + + LR CNVPV++I+GHEADDVV
Sbjct: 129 RRRELLPSYKAHR----KSPNHGRYSK----RPHQFVDEVLRKCNVPVVRIEGHEADDVV 188

Query: 201 ATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLKHYLAQYNCDPC 260
           ATL+EQ +QRG+RAVIASPDKDFKQLISE+VQ+V+PL +L RWSFYTLKHY AQYNCDP 
Sbjct: 189 ATLMEQAVQRGYRAVIASPDKDFKQLISENVQIVIPLADLRRWSFYTLKHYHAQYNCDPQ 248

Query: 261 SDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLSAAAVRTVGKPYAQD 320
           SDLS RCIMGDEVDGVPGIQH+ P FGRKTAMKL++KHGSLE+LLSAAAVRTVG+PYAQ+
Sbjct: 249 SDLSFRCIMGDEVDGVPGIQHMVPAFGRKTAMKLVRKHGSLESLLSAAAVRTVGRPYAQE 308

Query: 321 ALTKYADYLRTNYKVLALRRDIDVQFREEWLVDRDRQNDSTILSKF 361
           ALTKYADYLR NY+VLAL RD+ VQ + EWL++RD  NDS +LS F
Sbjct: 309 ALTKYADYLRRNYQVLALNRDVRVQIQNEWLMERDTSNDSEVLSSF 341

[Close]

BLAST of Carg06084 vs. TAIR 10
Match: AT1G34380.1 (5'-3' exonuclease family protein )

HSP 1 Score: 249.2 bits (635), Expect = 5.3e-66
Identity = 134/246 (54.47%), Postives = 170/246 (69.11%), Query Frame = 0


Query: 21  PTSLPSRTLKAAESVRTTKAKPWRTKPLKLSVFPASSRSTSSGFKQA------EDGKLAP 80
           P SL S + K+ +     K +P RTK +  S    SS S+   F +       +   L  
Sbjct: 9   PNSLFSFSTKSID-----KTQPSRTKWVSSSSSSFSSHSSVETFHRTGNVQVLQKDVLCG 68

Query: 81  TVEADNPRKGRVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSRSDPVIAVIDGEGGSE 140
             E    +  RVFFLDV+PLCY+G++PS   FG W+S+FF +VS +DPVIAVIDGE G++
Sbjct: 69  NNEEIRKKNKRVFFLDVSPLCYEGNKPSSQAFGHWISLFFSQVSLTDPVIAVIDGEEGNQ 128

Query: 141 HRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVIKIKGHEADDVV 200
            RR LLPSYKAHR    +  +  R++K    R +Q + + LR CNVPV++I+GHEADDVV
Sbjct: 129 RRRELLPSYKAHR----KSPNHGRYSK----RPHQFVDEVLRKCNVPVVRIEGHEADDVV 188

Query: 201 ATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLKHYLAQYNCDPC 260
           ATL+EQ +QRG+RAVIASPDKDFKQLISE+VQ+V+PL +L RWSFYTLKHY AQYNCDP 
Sbjct: 189 ATLMEQAVQRGYRAVIASPDKDFKQLISENVQIVIPLADLRRWSFYTLKHYHAQYNCDPQ 241

[Close]

BLAST of Carg06084 vs. TAIR 10
Match: AT3G52050.4 (5'-3' exonuclease family protein )

HSP 1 Score: 103.2 bits (256), Expect = 4.7e-22
Identity = 79/298 (26.51%), Postives = 138/298 (46.31%), Query Frame = 0


Query: 64  FKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSL---------HNFGR--WVSI 123
           FK  E  ++A T  + N   GRV  +D   + Y+     L         H  G   WV  
Sbjct: 79  FKSEE--RVASTAASSN---GRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLT 138

Query: 124 FFEEVS--------RSDPVIAVIDGEG-----GSEHRRLLLPSYKAHRIKFTRQSSSQRF 183
            F  +S            V  V D +G     G   R  L P+YK++R            
Sbjct: 139 IFSSLSLLIDVLKFLPSHVAVVFDHDGYRSAKGMNFRHTLYPAYKSNRPP---------- 198

Query: 184 TKGNSGRSYQVIRDALRSCNVPVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQ 243
           T     +  Q ++ ++++ ++ VI++ G EADDV+ TL  + +  GF+  + SPDKDF Q
Sbjct: 199 TPDTIVQGLQYLKASIKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQ 258

Query: 244 LISEDVQLVMPLPELNRWSFYTLKHYLAQY-NCDPCSDLSLRCIMGDEVDGVPGIQHVAP 303
           ++S  ++L+   P  +  + + ++ +  ++ N +P   + +  + GD+ D +PG+     
Sbjct: 259 ILSPSLRLLRLTPRGSEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVD---- 318

Query: 304 GFGRKTAMKLLKKHGSLENLLSAAAVRTVGKPYAQDALTKYADYLRTNYKVLALRRDI 337
           G G   A++L+ + G+LENLL +      GK   +++L   AD    + K+  LR D+
Sbjct: 319 GIGNVHAVELISRFGTLENLLQSVDEIKEGK--IKESLIASADQAILSKKLALLRSDL 355

[Close]

BLAST of Carg06084 vs. TAIR 10
Match: AT3G52050.5 (5'-3' exonuclease family protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-21
Identity = 71/265 (26.79%), Postives = 125/265 (47.17%), Query Frame = 0


Query: 64  FKQAEDGKLAPTVEADNPRKGRVFFLDVNPLCYQGSRPSL---------HNFGR--WVSI 123
           FK  E  ++A T  + N   GRV  +D   + Y+     L         H  G   WV  
Sbjct: 102 FKSEE--RVASTAASSN---GRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLT 161

Query: 124 FFEEVSRSDPV-------IAVIDGEGGSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSG 183
            F  +S    V       +AV+    G   R  L P+YK++R            T     
Sbjct: 162 IFSSLSLLIDVLKFLPSHVAVVFDHDGMNFRHTLYPAYKSNRPP----------TPDTIV 221

Query: 184 RSYQVIRDALRSCNVPVIKIKGHEADDVVATLVEQVLQRGFRAVIASPDKDFKQLISEDV 243
           +  Q ++ ++++ ++ VI++ G EADDV+ TL  + +  GF+  + SPDKDF Q++S  +
Sbjct: 222 QGLQYLKASIKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSL 281

Query: 244 QLVMPLPELNRWSFYTLKHYLAQY-NCDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKT 303
           +L+   P  +  + + ++ +  ++ N +P   + +  + GD+ D +PG+     G G   
Sbjct: 282 RLLRLTPRGSEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVD----GIGNVH 341

Query: 304 AMKLLKKHGSLENLLSAAAVRTVGK 310
           A++L+ + G+LENLL +      GK
Sbjct: 342 AVELISRFGTLENLLQSVDEIKEGK 347

[Close]

BLAST of Carg06084 vs. TAIR 10
Match: AT3G52050.2 (5'-3' exonuclease family protein )

HSP 1 Score: 95.9 bits (237), Expect = 7.5e-20
Identity = 57/206 (27.67%), Postives = 108/206 (52.43%), Query Frame = 0


Query: 132 GSEHRRLLLPSYKAHRIKFTRQSSSQRFTKGNSGRSYQVIRDALRSCNVPVIKIKGHEAD 191
           G   R  L P+YK++R            T     +  Q ++ ++++ ++ VI++ G EAD
Sbjct: 178 GMNFRHTLYPAYKSNRPP----------TPDTIVQGLQYLKASIKAMSIKVIEVPGVEAD 237

Query: 192 DVVATLVEQVLQRGFRAVIASPDKDFKQLISEDVQLVMPLPELNRWSFYTLKHYLAQY-N 251
           DV+ TL  + +  GF+  + SPDKDF Q++S  ++L+   P  +  + + ++ +  ++ N
Sbjct: 238 DVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRGSEMASFGMEDFAKKFGN 297

Query: 252 CDPCSDLSLRCIMGDEVDGVPGIQHVAPGFGRKTAMKLLKKHGSLENLLSAAAVRTVGKP 311
            +P   + +  + GD+ D +PG+     G G   A++L+ + G+LENLL +      GK 
Sbjct: 298 LEPAQFVDIIALAGDKSDNIPGVD----GIGNVHAVELISRFGTLENLLQSVDEIKEGK- 357

Query: 312 YAQDALTKYADYLRTNYKVLALRRDI 337
             +++L   AD    + K+  LR D+
Sbjct: 358 -IKESLIASADQAILSKKLALLRSDL 367

The following BLAST results are available for this feature:

BLAST of Carg06084 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033404.1	4.4e-216	100.00	hypothetical protein SDJN02_07460 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961199.1	1.7e-212	98.69	uncharacterized protein LOC111461781 [Cucurbita moschata]	[more]
XP_022990137.1	8.1e-210	96.85	uncharacterized protein LOC111487120 [Cucurbita maxima]	[more]
XP_023542307.1	1.3e-207	95.54	uncharacterized protein LOC111802238 [Cucurbita pepo subsp. pepo]	[more]
KAG6602717.1	6.0e-189	96.28	hypothetical protein SDJN03_07950, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg06084 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O67550	4.1e-23	31.55	5'-3' exonuclease OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1628 PE=3 SV=...	[more]
P52026	5.6e-20	24.48	DNA polymerase I OS=Geobacillus stearothermophilus OX=1422 GN=polA PE=1 SV=2	[more]
Q9S1G2	8.9e-18	29.15	DNA polymerase I OS=Rhizobium leguminosarum OX=384 GN=polA PE=3 SV=1	[more]
Q9RLB6	1.5e-17	26.15	DNA polymerase I OS=Rickettsia helvetica OX=35789 GN=polA PE=3 SV=1	[more]
Q92GB7	4.4e-17	25.23	DNA polymerase I OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944...	[more]

BLAST of Carg06084 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDC1	8.4e-213	98.69	uncharacterized protein LOC111461781 OS=Cucurbita moschata OX=3662 GN=LOC1114617...	[more]
A0A6J1JHT6	3.9e-210	96.85	uncharacterized protein LOC111487120 OS=Cucurbita maxima OX=3661 GN=LOC111487120...	[more]
A0A6J1DGI1	1.6e-182	86.25	uncharacterized protein LOC111020233 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A0A0LQN4	5.2e-178	83.65	53EXOc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G402050 PE=4...	[more]
A0A1S3B2X7	9.7e-177	83.38	5'-3' exonuclease OS=Cucumis melo OX=3656 GN=LOC103485414 PE=4 SV=1	[more]

BLAST of Carg06084 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34380.2	2.3e-114	60.98	5'-3' exonuclease family protein	[more]
AT1G34380.1	5.3e-66	54.47	5'-3' exonuclease family protein	[more]
AT3G52050.4	4.7e-22	26.51	5'-3' exonuclease family protein	[more]
AT3G52050.5	1.8e-21	26.79	5'-3' exonuclease family protein	[more]
AT3G52050.2	7.5e-20	27.67	5'-3' exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002421	5'-3' exonuclease	SMART	SM00475	53exo3	coord: 84..348 e-value: 1.2E-15 score: 68.0
None	No IPR available	GENE3D	3.40.50.1010		coord: 83..249 e-value: 2.0E-27 score: 97.5
None	No IPR available	GENE3D	1.10.150.20		coord: 250..330 e-value: 9.5E-19 score: 69.3
None	No IPR available	PANTHER	PTHR10133:SF52	5'-3' EXONUCLEASE FAMILY PROTEIN	coord: 1..368
IPR020045	DNA polymerase I-like, H3TH domain	PFAM	PF01367	5_3_exonuc	coord: 259..343 e-value: 7.3E-14 score: 52.2
IPR020045	DNA polymerase I-like, H3TH domain	CDD	cd09898	H3TH_53EXO	coord: 262..332 e-value: 1.35255E-14 score: 66.2685
IPR020046	5'-3' exonuclease, alpha-helical arch, N-terminal	PFAM	PF02739	5_3_exonuc_N	coord: 114..229 e-value: 3.7E-20 score: 72.4
IPR002298	DNA polymerase A	PANTHER	PTHR10133	DNA POLYMERASE I	coord: 1..368
IPR036279	5'-3' exonuclease, C-terminal domain superfamily	SUPERFAMILY	47807	5' to 3' exonuclease, C-terminal subdomain	coord: 259..359
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 85..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06084-RA	Carg06084-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0003824	catalytic activity