Carg06080 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06080
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type domain-containing protein
Location	Carg_Chr04: 21812664 .. 21815585 (-)
RNA-Seq Expression	Carg06080
Synteny	Carg06080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGGACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGGTTAGTTTTGTTTTTCCTCTCTGTTTCAACCTTTGCCTGCTCCATTCAACTTTAAAATTTTGATGTGTTAATTGTATTGTGTACTGGTGCGTGCTTTGATTGAATGTCTGTGCTCTCGTAATCACTAGTCGTTGTGACTTGTGCCGCCTATAGGCAAGGATTAATTTTATGATTTAAGATTCTGTCAAATAGTAAAAGGTGATTTAGGAAAGCTATTATGTTTTGAGAAGATGAAAAATATGTACTGCAGGCTGCTTATGGGTTCTGGTTTTTCTGATTTCAGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTGGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAAAGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAGTAATGACTTTCTACACTATTAACTTCATGCCCGTTCTCCATTTGTGGAAGTGAATGACTTCTTTTAACTATGTTTCTGTTGCTTTGCATGCTTCAGTAATTCGGTTTACTTGTAGTGTAGATATTGAATTAAATTTAGCAGTGACAAATGTAGTAGGGCCAAGTGACTGATGAAGATAGTTGAGTTGTGCAAAAGCTAGTCCTGACACTCACGAATATGAAAAAAAAATCCAAACAACATGATCAAGTGCCTTTCCAAACTTGATTTATCAATCTAAACTTTGTGCCCATACTTGGTTTTCAATTATAAGGTTTCTCTTGGTTTTCTACTCTGCTAATGGGTATGCAGTTATTTGGTTAACATTGTATTGCATGCATAAGAAGAAATGTTTTGAAAAGTGAGCTGCTTTATGCACGGTTCTACAAAGACACTGAGTTTTTTGTAAGCTTGAAGATTTTCTGGTCATAACTTTGAAGAGGTTTACAGTGGCAGGGAGCTCAGCTGGTATTAGAATACATGCTGTATTTGTTACTAAATCATCCGGTGAGACATTGAAGAAGTACGCAGGCTCCGCTAACGTTGAGATATGGATAGCTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCCATCTCCTTTATTTCTCTTCTTGCAATCTCTGCAATGCTTGCTACTTGTTTCTTCGCTCATAGGCATCGAATAAGACGAGGACATTCTCGATCTTCTCAGGCTCGAGAGTTTCGGGGCATAAGCAGACGAGTAGTTAAAGCAATGCCAAGCCTCATTTTTACTACTGCTTTAGAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCATAGTAAGTTCACTCCTTTTCTTCTAAAATTTATATTTTATTGTTATGTATATATATTGCATTTATAGGAATACTAGTTATACTCCTTGTTATGGTGTGTTTATAATAAATGATCTATAGCTCAGAGGCCCAACTTTTGCGAATTCAAGTTTATAATAAATGAGCTCTTAATCTTTACAAAAGGAGTATAACTAAGGCCTTAACCACATATCCACCGAATTCTTGTGCCTACTTAAGGCCTCAGAAATGTTGTCTTTTGCATCTCTGGTCTCATGCCTTTCAAAATCATGTCTGAGAGATTCTTTGTTTAGTGGGATGATTTAGATGTCAATATTTTTCATCTTATCTAATATATAAACACACACACACACACACACATGCAGAGGCTTCAAAAGGAGGTCGAAGCTTCATGATTCTCTGACCATATACTGCTTGATGTTTTCATCTCAACGTGAGCAGTTAACCATGTTTCTTTTTCCACAAATACTTCTTACCTCCTGATTCTGTGGCAACTATGATATATTCAACGGGAATCTCTAAGGTTATTTTGTCAACAAAGTCTCATTTCTTTTCATCAAATATCCAACCCCAGTTCACCCCATTCAACCACTAACTAGCTAAGAATTCTAGTAGTTTCCTTCGACCCTGTGCTTACAGGATCAAGATTGCACAAGTAGTCTTTATGCGTCTTTTTCCCTTCTCTTTTCTTTTGTCATGCTATACTTTGCTTACATGCATACCTGCATTTGTTTCATATATAATGATCTAGCTAACCACCTGTGATCGGTACTGAAAATAGTTTAATTGTAAATGATTTCAGAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCACCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCGGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGA

mRNA sequence

ATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGGACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTGGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAAAGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAATTTTCTGGTCATAACTTTGAAGAGGTTTACAGTGGCAGGGAGCTCAGCTGGTATTAGAATACATGCTGTATTTGTTACTAAATCATCCGGTGAGACATTGAAGAAGTACGCAGGCTCCGCTAACGTTGAGATATGGATAGCTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCCATCTCCTTTATTTCTCTTCTTGCAATCTCTGCAATGCTTGCTACTTGTTTCTTCGCTCATAGGCATCGAATAAGACGAGGACATTCTCGATCTTCTCAGGCTCGAGAGTTTCGGGGCATAAGCAGACGAGTAGTTAAAGCAATGCCAAGCCTCATTTTTACTACTGCTTTAGAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCATAAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCACCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCGGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGA

Coding sequence (CDS)

ATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGGACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTGGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAAAGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAATTTTCTGGTCATAACTTTGAAGAGGTTTACAGTGGCAGGGAGCTCAGCTGGTATTAGAATACATGCTGTATTTGTTACTAAATCATCCGGTGAGACATTGAAGAAGTACGCAGGCTCCGCTAACGTTGAGATATGGATAGCTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCCATCTCCTTTATTTCTCTTCTTGCAATCTCTGCAATGCTTGCTACTTGTTTCTTCGCTCATAGGCATCGAATAAGACGAGGACATTCTCGATCTTCTCAGGCTCGAGAGTTTCGGGGCATAAGCAGACGAGTAGTTAAAGCAATGCCAAGCCTCATTTTTACTACTGCTTTAGAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCATAAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCACCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCGGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGA

Protein sequence

MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC

Homology

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: KAG7033400.1 (Receptor-likey region, transmembrane domain- and RING domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 865.9 bits (2236), Expect = 1.5e-247
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 455

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: KAG6602713.1 (Receptor-likey region, transmembrane domain- and RING domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 835.5 bits (2157), Expect = 2.2e-238
Identity = 443/455 (97.36%), Postives = 444/455 (97.58%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_022958340.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 830.5 bits (2144), Expect = 7.1e-237
Identity = 440/455 (96.70%), Postives = 442/455 (97.14%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLP+TNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPLTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGH RSS AREFRGISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHPRSSHAREFRGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_023533724.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 825.5 bits (2131), Expect = 2.3e-235
Identity = 438/455 (96.26%), Postives = 440/455 (96.70%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLEN VQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENNVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGS NVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSTNVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSS AREFRGISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSHAREFRGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRS+FCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHIS SAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_022990023.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 822.8 bits (2124), Expect = 1.5e-234
Identity = 436/455 (95.82%), Postives = 439/455 (96.48%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAAN GLAFLF+LLL GCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANPGLAFLFMLLLAGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGH RSS AREF GISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHPRSSHAREFWGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRS+FCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. ExPASy Swiss-Prot
Match: Q8VZ14 (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=RMR2 PE=2 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.5e-133
Identity = 270/461 (58.57%), Postives = 337/461 (73.10%), Query Frame = 0


Query: 7   NSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 66
           N  L  L  +  V C  S + V+L+  N+TLS D IEA+FAP++  +G+ GV+Y+A PLD
Sbjct: 2   NRALVLLLYVCTVSCLAS-SKVILMRNNITLSFDDIEANFAPSVKGTGEIGVVYVAEPLD 61

Query: 67  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 126
           AC  L NK +     +SPF LI+RGGCSFE+KVR+AQ AGFKAAI+YDN+D G LIA   
Sbjct: 62  ACQNLMNKPEQSSNETSPFVLIVRGGCSFEEKVRKAQRAGFKAAIIYDNEDRGTLIA--- 121

Query: 127 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 186
                   +AG+S GIRIHAVFVTK +GE LK+YAG  + ++W+ PSFENSAWSIMA+SF
Sbjct: 122 --------MAGNSGGIRIHAVFVTKETGEVLKEYAGFPDTKVWLIPSFENSAWSIMAVSF 181

Query: 187 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 246
           ISLLA+SA+LATCFF  RHRIRR  SRSS+ REF G+SRR+VKAMPSLIF++  EDN T+
Sbjct: 182 ISLLAMSAVLATCFFVRRHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSFHEDNTTA 241

Query: 247 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 306
            TCAICLEDYT G+KLR+L C HKFHA+CVDSWLT+WRTFCPVCKRDARTSTG+PP SES
Sbjct: 242 FTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEPPASES 301

Query: 307 TPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTF 366
           TPLLSS +SSF SSS+ SS RS   +  I  SL S   S S + + +++ Y++ S +S+ 
Sbjct: 302 TPLLSSAASSFTSSSLHSSVRS--SALLIGPSLGSLPTSISFSPAYASSSYIRQSFQSSS 361

Query: 367 ---CP--SPSQRSVELRN-------ASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIP 426
               P  S S+ SV+LR        + SQRSY SH+ SP S  YP+ISP ++RYM P  P
Sbjct: 362 NRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRP 421

Query: 427 SPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           SPSN SP++ GSS++  NPL  S SA +FSP+ASA SLP+C
Sbjct: 422 SPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of Carg06080 vs. ExPASy Swiss-Prot
Match: Q10R93 (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.4e-105
Identity = 237/438 (54.11%), Postives = 291/438 (66.44%), Query Frame = 0


Query: 15  LLLLVGCCGS--------AANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 74
           +LLL+  C +        AANVVL+GTNLTLS D +EA FAP +  SG  GV+Y A PLD
Sbjct: 7   MLLLICLCATFCLMTQLGAANVVLMGTNLTLSFDDVEASFAPGVKGSGFEGVVYTAEPLD 66

Query: 75  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 134
           AC+ L +K +      SPFALIIRGGC+F++KV+ AQ AGFKAAIVYDN++ G LI    
Sbjct: 67  ACSPLTSKAE--KGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLI---- 126

Query: 135 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 194
                  ++AGSS GI I+AVF++K+SGE LKK++G  +VE+WI P+FENSAWSIMAISF
Sbjct: 127 -------SMAGSSGGIHIYAVFISKASGEVLKKFSGHTDVEVWILPAFENSAWSIMAISF 186

Query: 195 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 254
           ISLLA+SA+LATCFF  RH IRR   R  +AREF G+S ++VKAMPSLIFT   EDNCTS
Sbjct: 187 ISLLAMSAVLATCFFVRRHHIRRDRPRIPEAREFHGMSSQLVKAMPSLIFTKVQEDNCTS 246

Query: 255 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 314
             CAICLEDY  GEKLR+L C HKFHA+CVD WLT WRTFCPVCKRDA T   DPP SE+
Sbjct: 247 SMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDASTGIPDPPASET 306

Query: 315 TPLLSS-ISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRS- 374
           TPLLSS +     SSS  SS  + PP     +S    S S SR ++ S TP   + +RS 
Sbjct: 307 TPLLSSAVRLPSQSSSFRSSVAASPPR---PISRRPSSQSISRIYAASGTPNSPNPIRSF 366

Query: 375 --TFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSIS-PLHSRYMIPLIPSPSNTSP 434
             +   S S+ +V+L N SS R   SHL S +S     +S P++ RY  P +      SP
Sbjct: 367 TNSTAMSISRSNVDLSNMSS-RPRASHLASAHSLVGSHLSPPINIRYASPHMSHSGYASP 426

Query: 435 SIIGSSSHQHNPLHISGS 440
           S   SSS+  N  + S S
Sbjct: 427 SPHVSSSYVSNSGYGSSS 427

[Close]

BLAST of Carg06080 vs. ExPASy Swiss-Prot
Match: Q69U49 (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RMR1 PE=2 SV=2)

HSP 1 Score: 363.2 bits (931), Expect = 4.2e-99
Identity = 228/441 (51.70%), Postives = 287/441 (65.08%), Query Frame = 0


Query: 10  LAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACA 69
           L F  ++ L+   G A NVVLI  N TLS D +EA F P +  SG  G +Y   PLDAC+
Sbjct: 11  LLFCAVICLMAQQG-ACNVVLIANNTTLSFDDVEATFTPEVKDSGVNGAIYAVEPLDACS 70

Query: 70  TLENK-VQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVI 129
            L  K    PV   SPFAL+IRGGC F+DKVR AQ AGFKA IVYD++D G L+      
Sbjct: 71  PLRKKAANGPV---SPFALVIRGGCQFDDKVRNAQNAGFKAVIVYDDEDSGVLV------ 130

Query: 130 TLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFIS 189
                ++AGSS+GI I+AVF++K+SGE LKKY+G ++VE+WI P +ENSAWSIMAISF S
Sbjct: 131 -----SMAGSSSGIYIYAVFLSKASGEVLKKYSGQSDVEVWILPVYENSAWSIMAISFTS 190

Query: 190 LLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSVT 249
           LLA++A+LATCFF  RH+IRR   R    REF G+S ++VKAMPSLIFT   EDN TS +
Sbjct: 191 LLAMAAVLATCFFVRRHQIRRDRGRIPVTREFHGMSSQLVKAMPSLIFTKVQEDNSTSSS 250

Query: 250 CAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTP 309
           CAICLEDY+ GEKLR+L C HKFHA+CVD WLT+W+TFCPVCKRDA   T  PP SESTP
Sbjct: 251 CAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWKTFCPVCKRDASAGTSKPPASESTP 310

Query: 310 LLSSISSSFASSSILSSARS---LPPSSAIQVSLSSRSLSASRNHSLSTTP---YLQHSV 369
           LLSS+    A S+ LSS RS   + P   I+   SS+  S SR +S+S+ P    LQ   
Sbjct: 311 LLSSVIHLSAESTALSSFRSTVAVSPPRPIRRHPSSQ--STSRAYSISSAPRNYNLQRYY 370

Query: 370 RSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSIS-PLHSRYMIPLIPSPSNTSP 429
            ++   S S+ +V+L N SSQ S+T H  S +S     +S P++ RY IP +      S 
Sbjct: 371 TNSPYISTSRSNVDLANMSSQWSHTPHQASMHSLRSGHLSLPINIRYTIPHVSRSDYGSA 430

Query: 430 SI---IGSSSHQHNPLHISGS 440
           S+     S SH  +P +   S
Sbjct: 431 SLGLSHDSCSHHGSPSYYHSS 434

[Close]

BLAST of Carg06080 vs. ExPASy Swiss-Prot
Match: Q0WPW5 (Receptor homology region, transmembrane domain- and RING domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=RMR4 PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 5.2e-89
Identity = 212/462 (45.89%), Postives = 279/462 (60.39%), Query Frame = 0


Query: 8   SGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDA 67
           S +  L LLL+      +A V+LIG + +LS D +EA F P I  S   GVLY+A PLDA
Sbjct: 4   SSIVILSLLLISHLV--SAKVLLIGNSTSLSFDDVEATFTPMIKRSDQGGVLYVAEPLDA 63

Query: 68  CATLENKVQLP--VTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANF 127
           C+ L N V +    T S P+ LIIRGGCSFEDK+R AQ AG+KAAIVYD +D G L+   
Sbjct: 64  CSDLVNTVNVKNGTTVSPPYVLIIRGGCSFEDKIRNAQKAGYKAAIVYDYEDFGFLV--- 123

Query: 128 LVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAIS 187
                   ++AG+ +G+ I+  FV+K++GE LK+YAG  + E+W+ PSFE SAWSIMAIS
Sbjct: 124 --------SMAGNPSGVLIYGTFVSKATGEVLKEYAGRTDFEVWLMPSFETSAWSIMAIS 183

Query: 188 FISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCT 247
           FISLLA+SA+LATCFF  RHR+RR    +    +F  + + ++  MP+ IF    ++  T
Sbjct: 184 FISLLAMSAVLATCFFVRRHRVRRRRILALNGNDFHRMPKSMIIRMPTTIFNGICDEATT 243

Query: 248 SVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSE 307
           S+ C ICLE+Y  G+KLRIL CHHKFH +CVD WL   ++FCPVCKRDAR+ + D PPSE
Sbjct: 244 SILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPPSE 303

Query: 308 STPLLSSISS---------SFASSSILSSARSLPPSSAIQVSLSSRSLSASR-----NHS 367
            TP LS   S         S +S++ L S+  LP S  +  SL S S+         +HS
Sbjct: 304 HTPFLSRTPSMTPTSSFLLSSSSTTPLQSSHELPISIRVDPSLPSTSMQPHTVPMYLSHS 363

Query: 368 LSTTPYLQHSVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIP 427
            S T +   S R +     S+ S +LRNA SQRSY     SP+    P    LHSRY   
Sbjct: 364 RSHTSFQNGSNRFSRPIPVSRSSADLRNAVSQRSYN----SPHQVSLPRF--LHSRYTHI 423

Query: 428 LIPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLP 454
           L P  ++ S  +   +S + + LH + S  SF  FASA SLP
Sbjct: 424 LGPGNASRSQVVGLLTSQREHSLHQNDSRRSFIHFASASSLP 446

[Close]

BLAST of Carg06080 vs. ExPASy Swiss-Prot
Match: F4I2Y3 (Receptor homology region, transmembrane domain- and RING domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=RMR3 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 7.5e-80
Identity = 204/447 (45.64%), Postives = 272/447 (60.85%), Query Frame = 0


Query: 10  LAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACA 69
           L    LL +V     A  V+L+ +N+T S   +EADF+P++ ++ + GV+Y+A PL+AC 
Sbjct: 7   LILTLLLFIVSYVVDAGQVILVDSNITRSFVDMEADFSPSV-TTVETGVVYVAEPLNACR 66

Query: 70  TLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVIT 129
            L NK +     +SP  LIIRGGCSFE KVR AQ +GFKAAIVYDN D      NFL   
Sbjct: 67  NLRNKPEQSPYGTSPLVLIIRGGCSFEYKVRNAQRSGFKAAIVYDNVD-----RNFL--- 126

Query: 130 LKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIW-IAPSFENSAWSIMA-ISFI 189
                + G S GI+I AVFV K +GE LKKYAGS  +E+  + P+ E+S WS+ A I+ I
Sbjct: 127 ---SAMGGDSDGIKIQAVFVMKRAGEMLKKYAGSEEMEVMLVPPNTEDSVWSLYASIALI 186

Query: 190 SLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSV 249
             LAI  ++ TC F +R+     +S S    +F G+ RR VKAMPS+ FT A  DN T  
Sbjct: 187 LSLAIFCVMVTCVFFYRYCSTIRNSTS----QFNGMCRRTVKAMPSVTFTCAKIDNTTGF 246

Query: 250 TCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSEST 309
           +CAICLEDY  G+KLR+L C HKFH +CVDSWL +WRTFCPVCKRDART+  +P  +EST
Sbjct: 247 SCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEPLATEST 306

Query: 310 PLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTFC 369
           P L   SSS A+SS++      PP  +  VS S   +S+S  H    +  +  S  S   
Sbjct: 307 PFL---SSSIATSSLV--CIDSPPLGS-SVSFSPAHVSSSFIHQFVRSSPMNGSRIS--- 366

Query: 370 PSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSPSIIGSS 429
               +R      +SSQRS+ S + S +S  Y ++SPL++  M P  P PSN SP +  S+
Sbjct: 367 -ENLRRQASPLQSSSQRSHLS-MKSSHSLGYSTMSPLNAMGMSPYRPYPSNASPGLFSST 422

Query: 430 SHQHNPLHISGSAASFSPFASAQSLPE 455
           +H    L  + +A +FS FASA SLP+
Sbjct: 427 NH----LLSNYTANTFSHFASAHSLPD 422

[Close]

BLAST of Carg06080 vs. ExPASy TrEMBL
Match: A0A6J1H371 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111459586 PE=4 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 3.4e-237
Identity = 440/455 (96.70%), Postives = 442/455 (97.14%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLP+TNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPLTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGH RSS AREFRGISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHPRSSHAREFRGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. ExPASy TrEMBL
Match: A0A6J1JS21 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111487039 PE=4 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 7.2e-235
Identity = 436/455 (95.82%), Postives = 439/455 (96.48%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAAN GLAFLF+LLL GCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANPGLAFLFMLLLAGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGH RSS AREF GISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHPRSSHAREFWGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRS+FCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. ExPASy TrEMBL
Match: A0A6J1FL26 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445201 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 5.4e-198
Identity = 379/460 (82.39%), Postives = 402/460 (87.39%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSA N GLA LF LLLVG CG AANVVLIGTN+TLS DS+EA+FAP I S G+PGVLY
Sbjct: 1   MALSAMNPGLALLFSLLLVGSCGCAANVVLIGTNVTLSFDSVEANFAPAIGSPGEPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LA PLDAC+TLE+   LPV +SSPF LIIRGGCSFEDKVRRAQ+AGFKAAI+YDN+DGGG
Sbjct: 61  LAKPLDACSTLESNTALPVNSSSPFVLIIRGGCSFEDKVRRAQMAGFKAAIIYDNEDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAG ANVEIWI PSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGLANVEIWIVPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLA+SA+LATCFF  RHRIRRG  RSS A+EFRG+SRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSSHAQEFRGMSRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYT GEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTAGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 360
           PPPSESTPLLSS  SS ASSSILSS R SLPPSSAIQ+S SSRS S SRNHSLS+TPYLQ
Sbjct: 301 PPPSESTPLLSSAPSSVASSSILSSVRSSLPPSSAIQISPSSRSPSVSRNHSLSSTPYLQ 360

Query: 361 HSVRSTF----CPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 420
            S+RS++      S S+ SVELRNASSQRSY SHL+SPYSSCYPS+SPLHSRYMIPLIPS
Sbjct: 361 QSLRSSYHQASSLSISRSSVELRNASSQRSYASHLVSPYSSCYPSMSPLHSRYMIPLIPS 420

Query: 421 PSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSN SPSIIGSSSHQHNPLH SGSAASFSPFASAQSLPEC
Sbjct: 421 PSNASPSIIGSSSHQHNPLHCSGSAASFSPFASAQSLPEC 449

[Close]

BLAST of Carg06080 vs. ExPASy TrEMBL
Match: A0A6J1JSS3 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489445 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.5e-195
Identity = 375/460 (81.52%), Postives = 401/460 (87.17%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSA N GLA LF LLLVG CG AANVVLIGTN+TLS DS+EA+FAP I S G+PGVLY
Sbjct: 1   MALSAMNPGLALLFSLLLVGSCGCAANVVLIGTNVTLSFDSVEANFAPAIGSPGEPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LA PLDAC+TLE+   LPV +SSPFALIIRGGCSFEDKVRRAQ+AGFKAAI+YDN+DGGG
Sbjct: 61  LAKPLDACSTLESNTALPVNSSSPFALIIRGGCSFEDKVRRAQMAGFKAAIIYDNEDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKY+G ANVEIWI PSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYSGLANVEIWIVPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLA+SA+LATCFF  RHRIR+G  RSS A+EFRG+SRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAMSAVLATCFFVRRHRIRQGRPRSSHAQEFRGMSRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYT GEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTAGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 360
           PPPSESTPLLSS  SS ASSSILSS R SLPPSSAIQ+S SSRS S S+NHSLS+TPYL+
Sbjct: 301 PPPSESTPLLSSAPSSVASSSILSSVRSSLPPSSAIQISPSSRSPSVSQNHSLSSTPYLR 360

Query: 361 HSVRSTFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 420
            S+RS+   S     S+ SVELRNASSQRSY SHL+SPYSSCYPS+SPLHSRYMIPLIPS
Sbjct: 361 QSLRSSHHQSSSLSISRSSVELRNASSQRSYASHLVSPYSSCYPSMSPLHSRYMIPLIPS 420

Query: 421 PSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
            SN SPSIIGSSSHQHNPLH SGSAASFSPFASAQSLPEC
Sbjct: 421 SSNASPSIIGSSSHQHNPLHCSGSAASFSPFASAQSLPEC 449

[Close]

BLAST of Carg06080 vs. ExPASy TrEMBL
Match: A0A1S3B2Z2 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485424 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 4.4e-192
Identity = 370/460 (80.43%), Postives = 401/460 (87.17%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           + L+  N  LA LF LLLV   GSAANVVLIG N+TLS DSIEA+FAP+I SSG+PGVLY
Sbjct: 4   LLLTPMNPRLALLFSLLLVLSSGSAANVVLIGANITLSFDSIEANFAPSIESSGEPGVLY 63

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LA PLDAC+TLENKV +PV +SSPFALI+RGGCSFEDKVRRAQVAGFKAAI+YDN+D GG
Sbjct: 64  LAKPLDACSTLENKVVVPVNSSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNED-GG 123

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA        +F VAGSSAGIRIHAVFVTK+SGETLKKYAG ANVEIWI PSFENSAWS
Sbjct: 124 LIA--------KFAVAGSSAGIRIHAVFVTKTSGETLKKYAGLANVEIWIIPSFENSAWS 183

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLA+SA+LATCFF  RHRIRRG  RS  ++EFRG+SRRVVKAMPSLIFTTAL
Sbjct: 184 IMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSFYSQEFRGMSRRVVKAMPSLIFTTAL 243

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTS+TCAICLEDY+PGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 244 EDNCTSITCAICLEDYSPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 303

Query: 301 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 360
           PPPSESTPLLSS  SS ASSSILSS+R SLPPSSAIQ+S S RS S SRNHSLS TPYL 
Sbjct: 304 PPPSESTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPSLRSPSVSRNHSLSGTPYLH 363

Query: 361 HSVRSTFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 420
            S+RS++  SP    S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSRY+IP IPS
Sbjct: 364 QSLRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYLIPHIPS 423

Query: 421 PSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSN SPSIIGSSSHQHNPLH SGSAAS SPFASA+SLPEC
Sbjct: 424 PSNASPSIIGSSSHQHNPLHCSGSAASLSPFASARSLPEC 454

[Close]

BLAST of Carg06080 vs. TAIR 10
Match: AT1G71980.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 477.6 bits (1228), Expect = 1.1e-134
Identity = 270/461 (58.57%), Postives = 337/461 (73.10%), Query Frame = 0


Query: 7   NSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 66
           N  L  L  +  V C  S + V+L+  N+TLS D IEA+FAP++  +G+ GV+Y+A PLD
Sbjct: 2   NRALVLLLYVCTVSCLAS-SKVILMRNNITLSFDDIEANFAPSVKGTGEIGVVYVAEPLD 61

Query: 67  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 126
           AC  L NK +     +SPF LI+RGGCSFE+KVR+AQ AGFKAAI+YDN+D G LIA   
Sbjct: 62  ACQNLMNKPEQSSNETSPFVLIVRGGCSFEEKVRKAQRAGFKAAIIYDNEDRGTLIA--- 121

Query: 127 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 186
                   +AG+S GIRIHAVFVTK +GE LK+YAG  + ++W+ PSFENSAWSIMA+SF
Sbjct: 122 --------MAGNSGGIRIHAVFVTKETGEVLKEYAGFPDTKVWLIPSFENSAWSIMAVSF 181

Query: 187 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 246
           ISLLA+SA+LATCFF  RHRIRR  SRSS+ REF G+SRR+VKAMPSLIF++  EDN T+
Sbjct: 182 ISLLAMSAVLATCFFVRRHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSFHEDNTTA 241

Query: 247 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 306
            TCAICLEDYT G+KLR+L C HKFHA+CVDSWLT+WRTFCPVCKRDARTSTG+PP SES
Sbjct: 242 FTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEPPASES 301

Query: 307 TPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTF 366
           TPLLSS +SSF SSS+ SS RS   +  I  SL S   S S + + +++ Y++ S +S+ 
Sbjct: 302 TPLLSSAASSFTSSSLHSSVRS--SALLIGPSLGSLPTSISFSPAYASSSYIRQSFQSSS 361

Query: 367 ---CP--SPSQRSVELRN-------ASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIP 426
               P  S S+ SV+LR        + SQRSY SH+ SP S  YP+ISP ++RYM P  P
Sbjct: 362 NRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRP 421

Query: 427 SPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           SPSN SP++ GSS++  NPL  S SA +FSP+ASA SLP+C
Sbjct: 422 SPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of Carg06080 vs. TAIR 10
Match: AT4G09560.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 329.7 bits (844), Expect = 3.7e-90
Identity = 212/462 (45.89%), Postives = 279/462 (60.39%), Query Frame = 0


Query: 8   SGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDA 67
           S +  L LLL+      +A V+LIG + +LS D +EA F P I  S   GVLY+A PLDA
Sbjct: 4   SSIVILSLLLISHLV--SAKVLLIGNSTSLSFDDVEATFTPMIKRSDQGGVLYVAEPLDA 63

Query: 68  CATLENKVQLP--VTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANF 127
           C+ L N V +    T S P+ LIIRGGCSFEDK+R AQ AG+KAAIVYD +D G L+   
Sbjct: 64  CSDLVNTVNVKNGTTVSPPYVLIIRGGCSFEDKIRNAQKAGYKAAIVYDYEDFGFLV--- 123

Query: 128 LVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAIS 187
                   ++AG+ +G+ I+  FV+K++GE LK+YAG  + E+W+ PSFE SAWSIMAIS
Sbjct: 124 --------SMAGNPSGVLIYGTFVSKATGEVLKEYAGRTDFEVWLMPSFETSAWSIMAIS 183

Query: 188 FISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCT 247
           FISLLA+SA+LATCFF  RHR+RR    +    +F  + + ++  MP+ IF    ++  T
Sbjct: 184 FISLLAMSAVLATCFFVRRHRVRRRRILALNGNDFHRMPKSMIIRMPTTIFNGICDEATT 243

Query: 248 SVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSE 307
           S+ C ICLE+Y  G+KLRIL CHHKFH +CVD WL   ++FCPVCKRDAR+ + D PPSE
Sbjct: 244 SILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPPSE 303

Query: 308 STPLLSSISS---------SFASSSILSSARSLPPSSAIQVSLSSRSLSASR-----NHS 367
            TP LS   S         S +S++ L S+  LP S  +  SL S S+         +HS
Sbjct: 304 HTPFLSRTPSMTPTSSFLLSSSSTTPLQSSHELPISIRVDPSLPSTSMQPHTVPMYLSHS 363

Query: 368 LSTTPYLQHSVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIP 427
            S T +   S R +     S+ S +LRNA SQRSY     SP+    P    LHSRY   
Sbjct: 364 RSHTSFQNGSNRFSRPIPVSRSSADLRNAVSQRSYN----SPHQVSLPRF--LHSRYTHI 423

Query: 428 LIPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLP 454
           L P  ++ S  +   +S + + LH + S  SF  FASA SLP
Sbjct: 424 LGPGNASRSQVVGLLTSQREHSLHQNDSRRSFIHFASASSLP 446

[Close]

BLAST of Carg06080 vs. TAIR 10
Match: AT1G22670.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 299.3 bits (765), Expect = 5.3e-81
Identity = 204/447 (45.64%), Postives = 272/447 (60.85%), Query Frame = 0


Query: 10  LAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACA 69
           L    LL +V     A  V+L+ +N+T S   +EADF+P++ ++ + GV+Y+A PL+AC 
Sbjct: 7   LILTLLLFIVSYVVDAGQVILVDSNITRSFVDMEADFSPSV-TTVETGVVYVAEPLNACR 66

Query: 70  TLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVIT 129
            L NK +     +SP  LIIRGGCSFE KVR AQ +GFKAAIVYDN D      NFL   
Sbjct: 67  NLRNKPEQSPYGTSPLVLIIRGGCSFEYKVRNAQRSGFKAAIVYDNVD-----RNFL--- 126

Query: 130 LKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIW-IAPSFENSAWSIMA-ISFI 189
                + G S GI+I AVFV K +GE LKKYAGS  +E+  + P+ E+S WS+ A I+ I
Sbjct: 127 ---SAMGGDSDGIKIQAVFVMKRAGEMLKKYAGSEEMEVMLVPPNTEDSVWSLYASIALI 186

Query: 190 SLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSV 249
             LAI  ++ TC F +R+     +S S    +F G+ RR VKAMPS+ FT A  DN T  
Sbjct: 187 LSLAIFCVMVTCVFFYRYCSTIRNSTS----QFNGMCRRTVKAMPSVTFTCAKIDNTTGF 246

Query: 250 TCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSEST 309
           +CAICLEDY  G+KLR+L C HKFH +CVDSWL +WRTFCPVCKRDART+  +P  +EST
Sbjct: 247 SCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEPLATEST 306

Query: 310 PLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTFC 369
           P L   SSS A+SS++      PP  +  VS S   +S+S  H    +  +  S  S   
Sbjct: 307 PFL---SSSIATSSLV--CIDSPPLGS-SVSFSPAHVSSSFIHQFVRSSPMNGSRIS--- 366

Query: 370 PSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSPSIIGSS 429
               +R      +SSQRS+ S + S +S  Y ++SPL++  M P  P PSN SP +  S+
Sbjct: 367 -ENLRRQASPLQSSSQRSHLS-MKSSHSLGYSTMSPLNAMGMSPYRPYPSNASPGLFSST 422

Query: 430 SHQHNPLHISGSAASFSPFASAQSLPE 455
           +H    L  + +A +FS FASA SLP+
Sbjct: 427 NH----LLSNYTANTFSHFASAHSLPD 422

[Close]

BLAST of Carg06080 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 270.4 bits (690), Expect = 2.6e-72
Identity = 151/317 (47.63%), Postives = 210/317 (66.25%), Query Frame = 0


Query: 17  LLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACATLENKVQ 76
           LLV C  ++A VVLIG N  LS D +EA F P + +SG+ G+LY+A PL+AC+ + N  +
Sbjct: 11  LLVICKLASAKVVLIGKNTILSFDDVEATFTPIVRNSGECGILYVAEPLEACSDITNMAE 70

Query: 77  LPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVITLKRFTVA 136
                 S + LI+ GGCSFE+KVR+AQ AG+KAAIVY++     L+            +A
Sbjct: 71  KRSKYRSSYVLIVLGGCSFEEKVRKAQKAGYKAAIVYNDGYDELLV-----------PMA 130

Query: 137 GSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFISLLAISAML 196
           G+S+G+ IH + VT++SGE LK YA    +++W+ P F  S+WSIM I+FISLLA+SA+L
Sbjct: 131 GNSSGVDIHGLLVTRASGEVLKGYADQDEMKLWLIPGFGISSWSIMGITFISLLAMSAIL 190

Query: 197 ATCFFAHRHRIRRGHSRSSQAREFRGIS---RRVVKAMPSLIFTTALEDNCTSVTCAICL 256
           ATCF   RH+IR+  S        +G+S   R ++++MP+ +++  LE++ TSVTCAIC+
Sbjct: 191 ATCFVVRRHQIRQ--SVRDLPHGGQGLSCMPRDLLQSMPTEVYSGVLEESSTSVTCAICI 250

Query: 257 EDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTPLLSSI 316
           +DY  GEKLRIL C HK+HA C+DSWL   R+FCPVCK++ RT    PP SE+TPL+S  
Sbjct: 251 DDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGNDVPPASETTPLISPS 310

Query: 317 SSSFASSSILSSARSLP 331
            +S  S   L S   LP
Sbjct: 311 PNSITS---LQSFYDLP 311

[Close]

BLAST of Carg06080 vs. TAIR 10
Match: AT5G66160.2 (receptor homology region transmembrane domain ring H2 motif protein 1 )

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-47
Identity = 122/291 (41.92%), Postives = 161/291 (55.33%), Query Frame = 0


Query: 12  FLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACATL 71
           FL  LL V    S A VVL   +++ S   + A F  ++  +G  G LY+A+PLD C+ L
Sbjct: 15  FLSSLLRV----SLATVVL--NSISASFADLPAKFDGSVTKNGICGALYVADPLDGCSPL 74

Query: 72  ENKVQLPVT--NSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVIT 131
            +      T   ++ FALIIRG CSFEDK+  AQ +GF+A IVYDN D   LI       
Sbjct: 75  LHAAASNWTQHRTTKFALIIRGECSFEDKLLNAQNSGFQAVIVYDNIDNEDLI------- 134

Query: 132 LKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFISL 191
                +  +   I + AVFV+  +GE L+KYA   + E  + P    SAW+++AISF SL
Sbjct: 135 ----VMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLNPPDRGSAWTVLAISFFSL 194

Query: 192 LAISAMLATCFFAHRH--RIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSV 251
           L I   L   FFA RH  + R  H+R+ +      +  ++V  +P   FT +        
Sbjct: 195 LLIVTFLLIAFFAPRHWTQWRGRHTRTIR------LDAKLVHTLPCFTFTDSAHHK-AGE 254

Query: 252 TCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 299
           TCAICLEDY  GE LR+L C H FH +C+DSWLT W T CPVCK D RT T
Sbjct: 255 TCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTET 281

The following BLAST results are available for this feature:

BLAST of Carg06080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033400.1	1.5e-247	100.00	Receptor-likey region, transmembrane domain- and RING domain-containing protein ...	[more]
KAG6602713.1	2.2e-238	97.36	Receptor-likey region, transmembrane domain- and RING domain-containing protein ...	[more]
XP_022958340.1	7.1e-237	96.70	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
XP_023533724.1	2.3e-235	96.26	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
XP_022990023.1	1.5e-234	95.82	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of Carg06080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ14	1.5e-133	58.57	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
Q10R93	1.4e-105	54.11	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
Q69U49	4.2e-99	51.70	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
Q0WPW5	5.2e-89	45.89	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
F4I2Y3	7.5e-80	45.64	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of Carg06080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H371	3.4e-237	96.70	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
A0A6J1JS21	7.2e-235	95.82	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
A0A6J1FL26	5.4e-198	82.39	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
A0A6J1JSS3	1.5e-195	81.52	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
A0A1S3B2Z2	4.4e-192	80.43	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of Carg06080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71980.1	1.1e-134	58.57	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT4G09560.1	3.7e-90	45.89	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G22670.1	5.3e-81	45.64	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G35630.1	2.6e-72	47.63	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT5G66160.2	1.0e-47	41.92	receptor homology region transmembrane domain ring H2 motif protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 249..290 e-value: 1.0E-8 score: 44.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 248..291 e-value: 3.2E-11 score: 43.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 249..291 score: 12.445019
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 208..296 e-value: 3.5E-19 score: 70.2
None	No IPR available	GENE3D	3.50.30.30		coord: 28..172 e-value: 1.0E-22 score: 82.8
None	No IPR available	PANTHER	PTHR22765:SF308	PROTEASE-ASSOCIATED (PA) RING/U-BOX ZINC FINGER PROTEIN	coord: 10..390
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 10..390
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 248..291 e-value: 4.34781E-21 score: 83.8153
None	No IPR available	SUPERFAMILY	52025	PA domain	coord: 77..165
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 242..304
IPR003137	PA domain	PFAM	PF02225	PA	coord: 75..157 e-value: 1.1E-6 score: 28.7
IPR044744	ZNRF4 /RNF13/RNF167, PA domain	CDD	cd02123	PA_C_RZF_like	coord: 24..178 e-value: 3.78178E-44 score: 149.797

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06080-RA	Carg06080-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005773	vacuole
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity