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Carg06003 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTTGATAAATTACTTTGGCTAGTTATAAAAAATTTAGAAGATAATTCAACAAGGTTTTGCAGCAAGCATGTGAGGATCTCATCGAAGTGTCTAGATGATGCACGCAAATGCTTCGGTACAGATGAAGATATCCTATTGGTACCTCCTCTACCAGCTTCACCTTGTTATCTGTTCCATGGCAATTTGAAAATAGAAAATAACATGCTCAGTTCCATCTTTTTCCTTGTCTGATTTTGCTTTGGCATTGACTTTTTGGGGGAGATGCTCCATAGCTTTGCTTGTCCATCTCAACTTATTGTGACTACTCACTAATCAATGAAATTTGAAAAATCCAAATGATTCTTTTGTATGATCTGCCACCACAATCTGAAATTAGCTATTCATTGTCACAATAGAATAGGGAGAAGCGAACAAGAACTAAACAACTGAAGTCCTGGATGAACTATTATACTTTCTTTTGAGTTTGATTGTCTTTATAGGTATCATTGGAGAAGAGCGGGAAGCTAAGGATCCCATCACCTCGTCTTTCTCCAAATGTCAACATCGACTGCTGAGTATATATCTGTCTCCATTCCAATGTCTCAATACCACGAGAGTATTGAAACTCTGTATTATTACACTGTATAGTTCGTTGATTTCTTCTCTTCCATTTTATATATTGTGAATATATATATATTCATCCATATTTTTATTCTGTTTTTAGACTGGTGGTCATTGTAAAAGATGGGCTCGTTTTTACTCATATACAATCATTCTCTTCAGGGTGATTTTCATCAGTTCATTGACGACAATGTTCTGCTGTCCACTTCATGTTATAAGGTACGAGTTATGCTCCTCAATGCTCATTCTTTTTGCAGTCCCACGTAAATGCCCCACTTTTGCAGCCCCCACGCCACTCCTCCCTTTTGTAGTTAATGGAAATAGATATATTTATTAAATAGATATAACAAAATTGGGCTACAAAGAACTCTAATTTAGGCTCTACCCATTCCCACTTTTGATGTTTGCCTAATCACCAATAAGTTAGGCTCTATTTAACAATGGTGTTGTTTTTATTAGTTTTTATTAGAAAAACAAAGAAAAATGTTGGGAAATATGCAGAACTTTAAAAAAGAATTGGAAACCGAGAACATCGTTAATAATTTAGAACCTCATGACTATTCTCTTTTTGTTAAAAAAATAAAATCTATTGTTACATCACTAGTTTGTACAGATATATGGATGTTAGCTTTATTTTATTTATTTTTATTTTATTATATTAAATAATAATAAAGACATTATAAAATGATCAGAAACTAAAATGCGTAGATAAATGTAGGACGATGGGATAAAGTACATATGAAGATATTTTATGTAGACAAATATTAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAATCAGCCAACAAATGTCAATAATTATGTTCCTAGATTTAGTGTTGACATCTGTCATAGAAACGACTCTTAAATCGAAGCAAACACAAAAAAATAGAAATTAGGATTTTCTTTTCTTTTCGTAAAGTAGTAATCTTCTTCCTAATTTTATAGTATGGGCACCCACCCGCCATAAAGATGAGTATATTAGTAAGCAAGTATGGCCATAGAAGTAAGTTTTACCATGTGATATAAGAGAAATGGTAAGGTAATACTTCAATTTCCATAAAGATTGATAATCAAATAACGTTGGATTACAAGGATAAATTTTGATTGCCTTTTAAGGATATTTATTTAGTTATAGAATATTGATTGAAACTCAAACTAGATATCTTAATCAAATTTCATTGATAAAACTACTTGATGTCTGATATTTGGATCAAGCTTCATAGTTAAGTTTAGGAATTTTTTTCTTTTCTTTCTTTTTTTTTTATATTTTATTTTATTTCAGTAAGCGATTTAGTTGATACGGTAATTATTGAAAGTAGAAAAAAAATGATAATTTTTAGTAACGTATCTAGTATTTTTGAAAACTCTCTTGTTTCTATAAGGAAAACACACACATAAAAAAGAAAATAAAAAGAAAAGAAAAAGAAGTAATCTCGTCTGGAATAAATGAATAATATTACCTTTAAAAAGATAAAGCAATTGAAAAAAAGAAAAAGAAAAGAAATGGATACAGTGTTGGAAATCTGTGGGATTCATCATTTATCAAGGTGTGTGGGGATGCATAGATGTTGAGTCTGCCCTACGGCTACGGGTTGTCATATAATGAGGATGAATGGGACACGTGGAGGGATGAAAATAGTTGAACATGGTTATGATCATCTTCTCTAGGCAAAAAAGAAAAAGAAATCATAAGACTTAACACATAATGTTTTGTCAAAGAAAAGAATGGGCCCAAAATTAATAATGGACAACACTCACTCACTCACTCACTCACTCCACACCCACCCACCCTCAACCAGACAGTCCCATACTCCCAGTTGGAGGGTAGATTTGAAATTTGCATAGGTTTTGAAATGGTCTTTTAAGGCCCCTTTCATTTTAATAAAAGTCATGTACCTTAATTTCATAGTTTTAGCTCTGCTATTCCCAATATGAACATCTTAAAAGGGGAAACTCCTTCCCTTTTTGTTCTGTAATCATTTCATCTATAAGCCCCACCTTGTCTCCTTTAAATCTACTACCCTTCAATGTACCTTCAAACCATTTCTTCCTCCCGTCCATTTCACATTTTGGGTTAAGTAGATATGTGACTGTCCCTCTCTGAAAGAAATATGTGTTTTAAGGTATTTTTATTTTTTATTTTTTATTTCCTCCTTCAATGTTGAATGTTAAAAGGTAATAAGAATTCAGCTTGCTAATTTTCTTTGTAAGAAGCATCTTGGTATTAAGATACTCCTGCATTTTATTGTCACTATACCAGAGCTTAAACACCAAGCTTGGGCAGGATTGCTTTGGTTTGTCTGACATATCATGGATAAAGAAATGTAGGACGGAAAAGTATATTGCCTAGTGAATATGAAGTTCTAATTTTGGATTGGTGGTGAGGCCGAACACCTCAGCCCTACCATCCCTTAACAAATAAATGGAGACCGCAATTCTCCTTTTTAGTTTCTTCATTTGTCTGAAGTGTTAAACTAGAGTTTAGGTAGAAAATAAAGAGATTGCATATGCATTTGATATAGAGGATGCCATGAGTTTATGATTATATTTGCATTCTTTTATAAGACCGAAAAGGATATGAGAGAGTGATGCTGATGTGAAGAACCATTGTTGTTGAACTATAAAAAGGAGACATTGTTGTTTAACCACTTGTGCTCTATCAAGTGATTGGTTGAGTTAAACAAGACCATTGAATTCATGGAGAATAGGTTAACTTAATGTTTTAGAAATTTATCAGTTTAATTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAAATTCCTAGACCAAAAACCAAATGTCTTATTACTAAATTTTGACATACTGATATATTTTGCGCTGGTTATTGGTCCATTCAGGTTCTTGATCGAGGTGTTGAGTTGACCTAGAAGATAGACACTCAAACTTGTGCGGTATTGTGTTCAACACTCCTTACTTAAATTCATGCTTGTACCGAAAAAGTGTTAAGTTGGGTTAGAGTAGTGTTGCATACCTAATTTGACCATTAAGATTTTGTTTGTGGAGCTAGGTCTATGTAGTCCCTTGGCATTCCAATAGATAATTTTGTTTGTGGAGCTAGGTCTATGTAGTCCCTTGGCATTCCAATAGTCTCTTCTTGATCTAGTAATCTTTTTTATGAGCGTCCTCTGATATAGGGTTACGCGGATTATAGGTGCCTACATAGTTTGGTTGCCACATTGACCTCCATCCTGCCTCAACCCCTAAAATTCAAGAAGTTATAACATCAATATAAAAGAAAGAAAGATTGGAGGATAGGTTAGGTAAAGATTGATGTAGAAGTGTTAAGACCGTTGTGTGTGAAATTCAAAAACAACAAGAAATGAAAGAGGCGGTAACTGTGAGTGACGTGTCATTGGGTAGAATTTAGAATAGGGGATTTGTCTTCTCTCTTTGTTGGCGGGAGTTTCTTTTTTTCTTTTTTTCTTTTTTTCTTTCCGTTTTAATTTCTTTCTCCCTCACTTATATCAGTCCTTGCACGCCAGCCGACCAGC ATGGGTGTTGATAAATTACTTTGGCTAGTTATAAAAAATTTAGAAGATAATTCAACAAGGTTTTGCAGCAAGCATGTGAGGATCTCATCGAAGTGTCTAGATGATGCACGCAAATGCTTCGGTACAGATGAAGATATCCTATTGGTACCTCCTCTACCAGCTTCACCTTGTTATCTGTTCCATGGCAATTTGAAAATAGAAAATAACATGCTCAGTTCCATCTTTTTCCTTGTATCATTGGAGAAGAGCGGGAAGCTAAGGATCCCATCACCTCGTCTTTCTCCAAATGTCAACATCGACTGCTGAGTATATATCTGTCTCCATTCCAATGTCTCAATACCACGAGAGTATTGAAACTCTGTATTATTACACTGTATAGTTCGTTGATTTCTTCTCTTCCATTTTATATATTGTGAATATATATATATTCATCCATATTTTTATTCTGTTTTTAGACTGGTGGTCATTGTAAAAGATGGGCTCGTTTTTACTCATATACAATCATTCTCTTCAGGGTGATTTTCATCAGTTCATTGACGACAATGTTCTGCTGTCCACTTCATGTTATAAGGTTCTTGATCGAGGTGTTGAGTTGACCTAGAAGATAGACACTCAAACTTGTGCGGTATTGTGTTCAACACTCCTTACTTAAATTCATGCTTGTACCGAAAAAGTGTTAAGTTGGGTTAGAGTAGTGTTGCATACCTAATTTGACCATTAAGATTTTGTTTGTGGAGCTAGGTCTATGTAGTCCCTTGGCATTCCAATAGATAATTTTGTTTGTGGAGCTAGGTCTATGTAGTCCCTTGGCATTCCAATAGTCTCTTCTTGATCTAGTAATCTTTTTTATGAGCGTCCTCTGATATAGGGTTACGCGGATTATAGGTGCCTACATAGTTTGGTTGCCACATTGACCTCCATCCTGCCTCAACCCCTAAAATTCAAGAAGTTATAACATCAATATAAAAGAAAGAAAGATTGGAGGATAGGTTAGGTAAAGATTGATGTAGAAGTGTTAAGACCGTTGTGTGTGAAATTCAAAAACAACAAGAAATGAAAGAGGCGGTAACTGTGAGTGACGTGTCATTGGGTAGAATTTAGAATAGGGGATTTGTCTTCTCTCTTTGTTGGCGGGAGTTTCTTTTTTTCTTTTTTTCTTTTTTTCTTTCCGTTTTAATTTCTTTCTCCCTCACTTATATCAGTCCTTGCACGCCAGCCGACCAGC ATGGGTGTTGATAAATTACTTTGGCTAGTTATAAAAAATTTAGAAGATAATTCAACAAGGTTTTGCAGCAAGCATGTGAGGATCTCATCGAAGTGTCTAGATGATGCACGCAAATGCTTCGGTACAGATGAAGATATCCTATTGGTACCTCCTCTACCAGCTTCACCTTGTTATCTGTTCCATGGCAATTTGAAAATAGAAAATAACATGCTCAGTTCCATCTTTTTCCTTGTATCATTGGAGAAGAGCGGGAAGCTAAGGATCCCATCACCTCGTCTTTCTCCAAATGTCAACATCGACTGCTGA MGVDKLLWLVIKNLEDNSTRFCSKHVRISSKCLDDARKCFGTDEDILLVPPLPASPCYLFHGNLKIENNMLSSIFFLVSLEKSGKLRIPSPRLSPNVNIDC Homology
BLAST of Carg06003 vs. NCBI nr
Match: KAG7033324.1 (hypothetical protein SDJN02_07379, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.4 bits (542), Expect = 9.1e-52 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Carg06003 vs. NCBI nr
Match: XP_022990004.1 (protein GUCD1 [Cucurbita maxima] >XP_022990005.1 protein GUCD1 [Cucurbita maxima] >XP_022990006.1 protein GUCD1 [Cucurbita maxima] >XP_022990007.1 protein GUCD1 [Cucurbita maxima] >XP_022990008.1 protein GUCD1 [Cucurbita maxima] >XP_022990009.1 protein GUCD1 [Cucurbita maxima]) HSP 1 Score: 90.9 bits (224), Expect = 6.8e-15 Identity = 50/79 (63.29%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Carg06003 vs. NCBI nr
Match: XP_023515366.1 (protein GUCD1 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023515430.1 protein GUCD1 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023515505.1 protein GUCD1 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023515584.1 protein GUCD1 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 90.9 bits (224), Expect = 6.8e-15 Identity = 50/79 (63.29%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Carg06003 vs. NCBI nr
Match: XP_022957524.1 (protein GUCD1 isoform X1 [Cucurbita moschata] >XP_022957532.1 protein GUCD1 isoform X1 [Cucurbita moschata] >XP_022957540.1 protein GUCD1 isoform X1 [Cucurbita moschata] >XP_022957550.1 protein GUCD1 isoform X1 [Cucurbita moschata] >XP_022957557.1 protein GUCD1 isoform X1 [Cucurbita moschata] >XP_022957566.1 protein GUCD1 isoform X1 [Cucurbita moschata] >XP_022957576.1 protein GUCD1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 90.9 bits (224), Expect = 6.8e-15 Identity = 50/79 (63.29%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Carg06003 vs. NCBI nr
Match: KAG6602638.1 (Guanylyl cyclase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.9 bits (224), Expect = 6.8e-15 Identity = 50/79 (63.29%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Carg06003 vs. ExPASy Swiss-Prot
Match: Q8L870 (Guanylyl cyclase 1 OS=Arabidopsis thaliana OX=3702 GN=GC1 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.3e-04 Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0
BLAST of Carg06003 vs. ExPASy TrEMBL
Match: A0A6J1JHE4 (protein GUCD1 OS=Cucurbita maxima OX=3661 GN=LOC111487029 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.3e-15 Identity = 50/79 (63.29%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Carg06003 vs. ExPASy TrEMBL
Match: A0A6J1GZG0 (protein GUCD1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458897 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.3e-15 Identity = 50/79 (63.29%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Carg06003 vs. ExPASy TrEMBL
Match: A0A1S3B3F0 (protein GUCD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485540 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10 Identity = 43/78 (55.13%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of Carg06003 vs. ExPASy TrEMBL
Match: A0A5A7TDH9 (Protein GUCD1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00670 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10 Identity = 43/78 (55.13%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of Carg06003 vs. ExPASy TrEMBL
Match: A0A5D3DL49 (Protein GUCD1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001370 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10 Identity = 43/78 (55.13%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of Carg06003 vs. TAIR 10
Match: AT5G05930.1 (guanylyl cyclase 1 ) HSP 1 Score: 45.4 bits (106), Expect = 3.1e-05 Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0
BLAST of Carg06003 vs. TAIR 10
Match: AT5G05930.2 (guanylyl cyclase 1 ) HSP 1 Score: 45.4 bits (106), Expect = 3.1e-05 Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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