Carg05965 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05965
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dehydration-responsive element-binding protein 2C-like isoform X1
Location	Carg_Chr04: 21321142 .. 21322311 (+)
RNA-Seq Expression	Carg05965
Synteny	Carg05965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTGGGTGATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATACGTAAAGCTCCAGCGAAAGGATCTAAGAAGGGATGTATGAAAGGTAAAGGTGGACCCATGAATTCAAATTGTAAATACAGAGGTGTGAGGCAGAGGACTTGGGGGAAATGGGTTGCGGAGATTCGTGAGCCGGATAGAGGTAGTAGGCTGTGGCTTGGTACTTTCTCTAATGCCATTGAAGCTGCTCTCGCCTATGACGAGGCTGCCAGGACCATGTATGGCCAGACTGCTCGTTTGAACCTTCCCAACATTACAAACACACGGCTGCTAGCAGGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACAATGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCGAGGACCGGGTTCCCGGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTAGGGATTGAATTTCCCAGTATGGATCACTTCCCGAACTTTCAAATGGACGAAATGTTCGAGTTGAGGACTAGTGACATTGCAATCCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTTGATGGCGATGGCGAATATCCCGATCGGAGCAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTCGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTGTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTCGTCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCTTGAATGAGGGGAGGGAGGAGGATCTGAATGCTGCAACAGATGATTTCGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

mRNA sequence

ATGAGTCTGGGTGATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATCTTACAATGACGCCACAACCTGTCCCCCCAGACGTGAGCCGAGGACCGGGTTCCCGGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTAGGGATTGAATTTCCCAGTATGGATCACTTCCCGAACTTTCAAATGGACGAAATGTTCGAGTTGAGGACTAGTGACATTGCAATCCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTTGATGGCGATGGCGAATATCCCGATCGGAGCAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTCGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTGTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTCGTCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCTTGAATGAGGGGAGGGAGGAGGATCTGAATGCTGCAACAGATGATTTCGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Coding sequence (CDS)

ATGAGTCTGGGTGATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATCTTACAATGACGCCACAACCTGTCCCCCCAGACGTGAGCCGAGGACCGGGTTCCCGGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTAGGGATTGAATTTCCCAGTATGGATCACTTCCCGAACTTTCAAATGGACGAAATGTTCGAGTTGAGGACTAGTGACATTGCAATCCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTTGATGGCGATGGCGAATATCCCGATCGGAGCAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTCGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTGTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTCGTCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCTTGAATGAGGGGAGGGAGGAGGATCTGAATGCTGCAACAGATGATTTCGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Protein sequence

MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNESYNDATTCPPRREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMFELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSLLQGNVYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLNEGREEDLNAATDDFARYLNYEMGGLGF

Homology

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BLAST of Carg05965 vs. NCBI nr
Match: KAG7033287.1 (hypothetical protein SDJN02_07342, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 513.8 bits (1322), Expect = 8.2e-142
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNESYNDATTCPPRREPRT 60
           MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNESYNDATTCPPRREPRT
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNESYNDATTCPPRREPRT 60

Query: 61  GFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMFELRTSDIAIPVSLE 120
           GFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMFELRTSDIAIPVSLE
Sbjct: 61  GFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMFELRTSDIAIPVSLE 120

Query: 121 KKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSLLQGN 180
           KKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSLLQGN
Sbjct: 121 KKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSLLQGN 180

Query: 181 VYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLNEGREEDLNAATD 240
           VYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLNEGREEDLNAATD
Sbjct: 181 VYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLNEGREEDLNAATD 240

Query: 241 DFARYLNYEMGGLGF 256
           DFARYLNYEMGGLGF
Sbjct: 241 DFARYLNYEMGGLGF 255

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BLAST of Carg05965 vs. NCBI nr
Match: KAG6602606.1 (Dehydration-responsive element-binding protein 2C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431.0 bits (1107), Expect = 7.0e-117
Identity = 246/389 (63.24%), Postives = 248/389 (63.75%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE---------------- 60
           MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE                
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ------------------------------------------SYNDATTC---------- 180
                                                     S N +  C          
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSTSDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 --PP----RREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240
             PP      EPRTGFPVDH ATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHAATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 256
           ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 300

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BLAST of Carg05965 vs. NCBI nr
Match: XP_022922977.1 (dehydration-responsive element-binding protein 2C-like isoform X3 [Cucurbita moschata] >XP_022922984.1 dehydration-responsive element-binding protein 2C-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 427.6 bits (1098), Expect = 7.8e-116
Identity = 245/389 (62.98%), Postives = 246/389 (63.24%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE---------------- 60
           MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE                
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ------------------------------------------SYNDATTC---------- 180
                                                     S N +  C          
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 --PP----RREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240
             PP      EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 256
           ELRTSDIAIPVSLEKKVKHESVDGD EYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 ELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 300

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BLAST of Carg05965 vs. NCBI nr
Match: XP_022922963.1 (dehydration-responsive element-binding protein 2C-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 414.5 bits (1064), Expect = 6.8e-112
Identity = 245/412 (59.47%), Postives = 246/412 (59.71%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE---------------- 60
           MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE                
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ------------------------------------------SYNDATTC---------- 180
                                                     S N +  C          
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 --PP----RREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPN------- 240
             PP      EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPN       
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ----------------FQMDEMFELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFD 256
                           FQMDEMFELRTSDIAIPVSLEKKVKHESVDGD EYPDRSSDPFD
Sbjct: 241 ELRTSDIAIPVSLEKKFQMDEMFELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFD 300

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BLAST of Carg05965 vs. NCBI nr
Match: XP_023535858.1 (dehydration-responsive element-binding protein 2C-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.8 bits (1052), Expect = 1.7e-110
Identity = 237/389 (60.93%), Postives = 243/389 (62.47%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE---------------- 60
           MSLG+RYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE                
Sbjct: 1   MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ------------------------------------------SYNDATTC---------- 180
                                                     S N +  C          
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQ 180

Query: 181 --PP----RREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240
             PP      EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPS+DHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMF 240

Query: 241 ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 256
           ELRT+DIA+PVSLEKKVKHESV  DGEYPDR+SDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 ELRTNDIAMPVSLEKKVKHESV--DGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSII 300

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BLAST of Carg05965 vs. ExPASy TrEMBL
Match: A0A6J1E4V9 (dehydration-responsive element-binding protein 2C-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430785 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.8e-116
Identity = 245/389 (62.98%), Postives = 246/389 (63.24%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE---------------- 60
           MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE                
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ------------------------------------------SYNDATTC---------- 180
                                                     S N +  C          
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 --PP----RREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240
             PP      EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 256
           ELRTSDIAIPVSLEKKVKHESVDGD EYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 ELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 300

[Close]

BLAST of Carg05965 vs. ExPASy TrEMBL
Match: A0A6J1E8A4 (dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430785 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.3e-112
Identity = 245/412 (59.47%), Postives = 246/412 (59.71%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE---------------- 60
           MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNE                
Sbjct: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCKYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNAIEAALA 120

Query: 121 ------------------------------------------SYNDATTC---------- 180
                                                     S N +  C          
Sbjct: 121 YDEAARTMYGQTARLNLPNITNTRLLAGSASDSSTTTSTTTTSSNQSDVCVSEELTMTPQ 180

Query: 181 --PP----RREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPN------- 240
             PP      EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPN       
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240

Query: 241 ----------------FQMDEMFELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFD 256
                           FQMDEMFELRTSDIAIPVSLEKKVKHESVDGD EYPDRSSDPFD
Sbjct: 241 ELRTSDIAIPVSLEKKFQMDEMFELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFD 300

[Close]

BLAST of Carg05965 vs. ExPASy TrEMBL
Match: A0A6J1JR01 (dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487548 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.7e-105
Identity = 227/386 (58.81%), Postives = 235/386 (60.88%), Query Frame = 0


Query: 1   MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNESYN------------- 60
           MSLGDRYSDAI LP KRIRKRKSRS RDPSTVAETLAKWKAYNE  N             
Sbjct: 1   MSLGDRYSDAIYLPAKRIRKRKSRSGRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAP 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  AKGSKKGCMKGKGGPMNSNCNYRGVRQRTWGKWVAEIREPDRGSRLWLGTFSNALEAALA 120

Query: 121 -------------------------------DATT------------------------- 180
                                          D++T                         
Sbjct: 121 YDEAARTMYGHTARLNLPKITNTGLLAGSASDSSTTTSTTTTSSNQSEVRVSEELTMTPQ 180

Query: 181 -CPP----RREPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMF 240
             PP      EPRTGFPVDH+ATSA+DAKFCDQGNDQAALLGIEFP +DHFPNFQMDEM+
Sbjct: 181 PVPPDVKIEGEPRTGFPVDHIATSALDAKFCDQGNDQAALLGIEFPRLDHFPNFQMDEMY 240

Query: 241 ELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSII 253
           E RT+DIA+PVSLEKKVKHESV  DGEYPD SSDPFDIQDVLQDFQIDEMFDVEELLSII
Sbjct: 241 EFRTNDIAMPVSLEKKVKHESV--DGEYPDWSSDPFDIQDVLQDFQIDEMFDVEELLSII 300

[Close]

BLAST of Carg05965 vs. ExPASy TrEMBL
Match: A0A6J1EAB0 (dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430785 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.8e-103
Identity = 196/222 (88.29%), Postives = 196/222 (88.29%), Query Frame = 0


Query: 57  EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPN----------------- 116
           EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPN                 
Sbjct: 180 EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMFELRTSDIAIP 239

Query: 117 ------FQMDEMFELRTSDIAIPVSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQI 176
                 FQMDEMFELRTSDIAIPVSLEKKVKHESVDGD EYPDRSSDPFDIQDVLQDFQI
Sbjct: 240 VSLEKKFQMDEMFELRTSDIAIPVSLEKKVKHESVDGDDEYPDRSSDPFDIQDVLQDFQI 299

Query: 177 DEMFDVEELLSIINSDSMHDQSLLQGNVYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHM 236
           DEMFDVEELLSIINSDSMHDQS LQGNVYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHM
Sbjct: 300 DEMFDVEELLSIINSDSMHDQSFLQGNVYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHM 359

Query: 237 EQAPADVNHGFDFLNEGREEDLNAATDDFARYLNYEMGGLGF 256
           EQ PADVNHGFDFLNEGREEDLNAATDDFARYLNYEMGGLGF
Sbjct: 360 EQPPADVNHGFDFLNEGREEDLNAATDDFARYLNYEMGGLGF 401

[Close]

BLAST of Carg05965 vs. ExPASy TrEMBL
Match: A0A6J1EAB0 (dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430785 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-04
Identity = 32/45 (71.11%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 19 RKRKSRSRRDPSTVAETLAKWKAYNESYN--DATTCPPRREPRTG 62
          RKRKSRSRRDPSTVAETLAKWKAYNE  N  D  + P R+ P  G
Sbjct: 8  RKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRKAPAKG 52

HSP 2 Score: 367.5 bits (942), Expect = 4.6e-98
Identity = 181/196 (92.35%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 57  EPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSMDHFPNFQMDEMFELRTSDIAIP 116
           EPRTGFPVDH+ATSA+DAKFCDQGNDQAALLGIEFP +DHFPNFQMDEM+E RT+DIA+P
Sbjct: 180 EPRTGFPVDHIATSALDAKFCDQGNDQAALLGIEFPRLDHFPNFQMDEMYEFRTNDIAMP 239

Query: 117 VSLEKKVKHESVDGDGEYPDRSSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSL 176
           VSLEKKVKHESV  DGEYPD SSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQS 
Sbjct: 240 VSLEKKVKHESV--DGEYPDWSSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSF 299

Query: 177 LQGNVYDSNNMVPPQPSSSSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLNEGREEDLN 236
           LQGNVYDSNNMVPPQPSS SNQ RYPDEKLLGSLQHMEQAPADVNHGFDFL EGREEDLN
Sbjct: 300 LQGNVYDSNNMVPPQPSSLSNQVRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGREEDLN 359

Query: 237 AATDDFARYLNYEMGG 253
           AATDDFARYLNYEMGG
Sbjct: 360 AATDDFARYLNYEMGG 373

[Close]

BLAST of Carg05965 vs. TAIR 10
Match: AT2G40340.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 29/91 (31.87%), Postives = 45/91 (49.45%), Query Frame = 0


Query: 150 DFQIDEMFDVEELLSIINSDSMHDQSLLQGNVYDSNNMVPPQPSSSSNQFRYPDEKLLGS 209
           +F +DE FD+ ELL I+N +++  Q  +Q  V    N         S Q ++P+  LLGS
Sbjct: 235 EFGVDETFDINELLGILNDNNVSGQETMQYQVDRHPNF--------SYQTQFPNSNLLGS 294

Query: 210 LQHMEQAPADVNHGFDFLNEGREEDLNAATD 241
           L  ME A   V++G  ++     E+     D
Sbjct: 295 LNPMEIAQPGVDYGCPYVQPSDMENYGIDLD 317

[Close]

BLAST of Carg05965 vs. TAIR 10
Match: AT5G05410.1 (DRE-binding protein 2A )

HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 1  MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNESYNDATTCPPRREPRT 60
          M++ D+  D         RKRKSRSR D +TVAE L +WK YNE+  + +T   R+ P  
Sbjct: 1  MAVYDQSGDRNRTQIDTSRKRKSRSRGDGTTVAERLKRWKEYNETVEEVST-KKRKVPAK 60

Query: 61 G 62
          G
Sbjct: 61 G 60

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BLAST of Carg05965 vs. TAIR 10
Match: AT5G05410.2 (DRE-binding protein 2A )

HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 1  MSLGDRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNESYNDATTCPPRREPRT 60
          M++ D+  D         RKRKSRSR D +TVAE L +WK YNE+  + +T   R+ P  
Sbjct: 1  MAVYDQSGDRNRTQIDTSRKRKSRSRGDGTTVAERLKRWKEYNETVEEVST-KKRKVPAK 60

Query: 61 G 62
          G
Sbjct: 61 G 60

The following BLAST results are available for this feature:

BLAST of Carg05965 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033287.1	8.2e-142	100.00	hypothetical protein SDJN02_07342, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6602606.1	7.0e-117	63.24	Dehydration-responsive element-binding protein 2C, partial [Cucurbita argyrosper...	[more]
XP_022922977.1	7.8e-116	62.98	dehydration-responsive element-binding protein 2C-like isoform X3 [Cucurbita mos...	[more]
XP_022922963.1	6.8e-112	59.47	dehydration-responsive element-binding protein 2C-like isoform X1 [Cucurbita mos...	[more]
XP_023535858.1	1.7e-110	60.93	dehydration-responsive element-binding protein 2C-like isoform X1 [Cucurbita pep...	[more]

BLAST of Carg05965 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4V9	3.8e-116	62.98	dehydration-responsive element-binding protein 2C-like isoform X3 OS=Cucurbita m...	[more]
A0A6J1E8A4	3.3e-112	59.47	dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1JR01	8.7e-105	58.81	dehydration-responsive element-binding protein 2C-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1EAB0	2.8e-103	88.29	dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1EAB0	1.0e-04	71.11	dehydration-responsive element-binding protein 2C-like isoform X2 OS=Cucurbita m...	[more]

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BLAST of Carg05965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40340.1	2.9e-04	31.87	Integrase-type DNA-binding superfamily protein	[more]
AT5G05410.1	2.9e-04	42.62	DRE-binding protein 2A	[more]
AT5G05410.2	2.9e-04	42.62	DRE-binding protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05965-RA	Carg05965-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity