Carg05942 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05942
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Reticulon-like protein
Location	Carg_Chr04: 21232026 .. 21234117 (-)
RNA-Seq Expression	Carg05942
Synteny	Carg05942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCAGGGCATGAAGAAAGAGGAAGGCTTAGAGCTTGGAAATTAAAAATTCAATTGCGTGAAACCGTTTCTGGCTTTGGCTTGGGAACTCTCGATCATATAGAAATCTCAAGAACGTTTCGAGCTGCAATTTTGACTCTGAAACGTTCCTCTCTAGAATTCAGTCTGGCCAGAGCAATTCGTAAGTGCAATGGTAGATAATTCCGGTAGCGCCGGTACTGTAGAAGGCGACGGCAAAGATATAGCCTGCATTTCATGTGACCGGCAAGTTTCACTCCACCAGTATATGGGTGGCGGCAAAGGTATTCAATTCTTCTCCCGCTAAAATTCATCAGTATCTTGATCAATTTCGCTCGATTCCTTTGTTCCCCTTTCGAGAATTTGATGTTCAATCTGTTGGCTGCAGTTGCCGATACTTTAGGGTTTTGGTTTTTTTTTTTTTTTTCCGAAACATAGGATTATATGAAGCTAGAATTGAAGTCATCAAGTGTGTTCTGAAATGGTTTGCTGGATTCGTCGATATTCTGTTCATTTATCTGTTTCCATTTTTGTATTTGAATTGCGACTTTGACCGGTTGAAACTTGAAGGCGTTTGTTATCTTTTGCTTTCGGAAATGGACTCTATATTGCCTAGAATCCAGTTTACTTCAAAATTCGAGAATGGTTTTGATGTTCTTTCGATGTGTATTTGAGGGAAGAAAATGATGATATTTCCTTTTCTGTTTTGATCATCGAGAATGTTGACTCTTTTGCTACTTCTGCATAGCGGCTGATGTTCTACTGTGGAAACAGCGGCATGTTTCTTTCGGCATTGTTGTCGTTGCGACCGTGTTTTGGCTTCTAATTGAGCACTCTGGGATGCCATTGCTAACAATAAGTTCAGATGTCCTGCTGGTTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCGCTTCGTCACAAGTATGGCAATGGCTGACTTTTATTTTGATTCACTGTGAACTTCTTCCATTTCATAATCTTTAACACGCTATTTTTTGCTCATATTATCTTCTTCTTTCAAGAAGATGGTATGTTTTTCCTTGTTAGCTCTTCTTCATTTTCCCTCCATATGCAGGCCAATTCAAACATTACCACAGCTAGTATTGTCAGAGGAATTTGTCGATAGCGTTGCAGCATCATTTCGGGCGAAAATCAACAATGCATTACTTATGGCTCATGACATCACACTTGGGAATGATTTTAAACTCTTTTTCAGGGTTAGTATTTCGAATGATCATGCATTTTATTGTACATTATAATTCCTTATATACTATATAATTGGATTTGTGAACTAGATGGGCAAAACTAAAAAAGGGTTATCAGCTTTAAGTACTCTTCCTTTGAAAATAATAGATAAGCTCTCATTTACACCATCAATGATGCCAGTTAGATCTGCAACCATAAGTAGCTAAAGCCCGAGGCAAAGAAAGCTATTTCAGGACAGTTTAAAGAATACATACATTTGATATTAACTTCAAGAGCGTAATATTTCCTTTCAGCTTCTTCATATCTGGTTGCACTAGTATGAGTAATCTTGCACAACTTTGCAGGTGGTGATTTGTTTGTGGCTTCTATCCGTCCTTGGTAGCTACCTTTCTTTCTTCACCTTTGCATATATCGGTATGTACGAACATCCTACACCGCTTCTATGAAATATATTTAGTTTGTATGCATTTCATCTGTGGGTAAATTACGGCAATCATCCCACATGTAATTTCATTTTGACATCAATAACTAAACATTCACAAAATTTTGTTTGTTTAGTCCATTCACCATTTTCTTTCATGTTTTTTGCACATAAGAAGTGATGTCTAAAATTTTCTTTTTCGAGTTTGCCCTCTCCATGTCATTGAGTCTTCTTAACTTATATTGATTTTTGGCCATTTGACTCGGTGACAGGAACAATCATCTCGATAACTGTCCCCGCCTTGTACAACAAATACAATAAACACGTCAATAGATATTTTGGAATGATCTTCCAGGAGTTTAGAAAGCATTACAAAGTGATGGACGAGAGTGTTTTCAGCAGACTCCCTGGTAGTTTTTCCAAGGATAAGGATCAATGA

mRNA sequence

TTTCCAGGGCATGAAGAAAGAGGAAGGCTTAGAGCTTGGAAATTAAAAATTCAATTGCGTGAAACCGTTTCTGGCTTTGGCTTGGGAACTCTCGATCATATAGAAATCTCAAGAACGTTTCGAGCTGCAATTTTGACTCTGAAACGTTCCTCTCTAGAATTCAGTCTGGCCAGAGCAATTCGTAAGTGCAATGGTAGATAATTCCGGTAGCGCCGGTACTGTAGAAGGCGACGGCAAAGATATAGCCTGCATTTCATGTGACCGGCAAGTTTCACTCCACCAGTATATGGGTGGCGGCAAAGCGGCTGATGTTCTACTGTGGAAACAGCGGCATGTTTCTTTCGGCATTGTTGTCGTTGCGACCGTGTTTTGGCTTCTAATTGAGCACTCTGGGATGCCATTGCTAACAATAAGTTCAGATGTCCTGCTGGTTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCGCTTCGTCACAAGCCAATTCAAACATTACCACAGCTAGTATTGTCAGAGGAATTTGTCGATAGCGTTGCAGCATCATTTCGGGCGAAAATCAACAATGCATTACTTATGGCTCATGACATCACACTTGGGAATGATTTTAAACTCTTTTTCAGGGTGGTGATTTGTTTGTGGCTTCTATCCGTCCTTGGTAGCTACCTTTCTTTCTTCACCTTTGCATATATCGGAACAATCATCTCGATAACTGTCCCCGCCTTGTACAACAAATACAATAAACACGTCAATAGATATTTTGGAATGATCTTCCAGGAGTTTAGAAAGCATTACAAAGTGATGGACGAGAGTGTTTTCAGCAGACTCCCTGGTAGTTTTTCCAAGGATAAGGATCAATGA

Coding sequence (CDS)

ATGGTAGATAATTCCGGTAGCGCCGGTACTGTAGAAGGCGACGGCAAAGATATAGCCTGCATTTCATGTGACCGGCAAGTTTCACTCCACCAGTATATGGGTGGCGGCAAAGCGGCTGATGTTCTACTGTGGAAACAGCGGCATGTTTCTTTCGGCATTGTTGTCGTTGCGACCGTGTTTTGGCTTCTAATTGAGCACTCTGGGATGCCATTGCTAACAATAAGTTCAGATGTCCTGCTGGTTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCGCTTCGTCACAAGCCAATTCAAACATTACCACAGCTAGTATTGTCAGAGGAATTTGTCGATAGCGTTGCAGCATCATTTCGGGCGAAAATCAACAATGCATTACTTATGGCTCATGACATCACACTTGGGAATGATTTTAAACTCTTTTTCAGGGTGGTGATTTGTTTGTGGCTTCTATCCGTCCTTGGTAGCTACCTTTCTTTCTTCACCTTTGCATATATCGGAACAATCATCTCGATAACTGTCCCCGCCTTGTACAACAAATACAATAAACACGTCAATAGATATTTTGGAATGATCTTCCAGGAGTTTAGAAAGCATTACAAAGTGATGGACGAGAGTGTTTTCAGCAGACTCCCTGGTAGTTTTTCCAAGGATAAGGATCAATGA

Protein sequence

MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ

Homology

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BLAST of Carg05942 vs. NCBI nr
Match: KAG7033265.1 (Reticulon-like protein B16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.7 bits (1114), Expect = 9.5e-118
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF
Sbjct: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF
Sbjct: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY
Sbjct: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ
Sbjct: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 223

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BLAST of Carg05942 vs. NCBI nr
Match: XP_023529321.1 (reticulon-like protein B16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.5 bits (1090), Expect = 5.8e-115
Identity = 219/223 (98.21%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDNSGSAGTVEGDGKDIACISCDRQVSLHQ MGGGKAADVLLWKQRHVSFGIVVVATVF
Sbjct: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF
Sbjct: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           R KINNALLMAHDITLGNDFK FFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY
Sbjct: 121 RGKINNALLMAHDITLGNDFKRFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           NKYNKHV+RYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ
Sbjct: 181 NKYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 223

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BLAST of Carg05942 vs. NCBI nr
Match: XP_022923115.1 (reticulon-like protein B16 [Cucurbita moschata])

HSP 1 Score: 418.3 bits (1074), Expect = 4.1e-113
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDNSGSAGTVEGDGKDIACISCDRQVSLHQ MGGGKAADVLLWKQRHVSFGIVVVAT+F
Sbjct: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATMF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF
Sbjct: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           RAKIN+ALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFT AYIGTIISITVPALY
Sbjct: 121 RAKINSALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTLAYIGTIISITVPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           NKY+KHV+RYFGMIFQEFRKHYKVMDESVFSRLPGSFSK KDQ
Sbjct: 181 NKYDKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKHKDQ 223

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BLAST of Carg05942 vs. NCBI nr
Match: XP_022993764.1 (reticulon-like protein B16 [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99
Identity = 193/223 (86.55%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDN  SAG V+GDGKDIAC SCDR  SLHQ MGGGKAAD+LLWKQRHVSFGIVVVATVF
Sbjct: 1   MVDNCDSAGNVDGDGKDIACTSCDRPASLHQSMGGGKAADILLWKQRHVSFGIVVVATVF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSG+PLLT  SDVLLVLVVLLFLRANFAA R K +QTLPQLVLSEEFVD+VAASF
Sbjct: 61  WLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           RAKINNALL+AHDITLGNDFKLFFR+VICLWLLSVLGSYLSFFTFAYIGTIISITVPALY
Sbjct: 121 RAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           +KY+KHV+R  GMI Q+FRKHY+VMDE VFSRLPGS SKDK Q
Sbjct: 181 SKYDKHVDRCCGMIRQQFRKHYRVMDERVFSRLPGSLSKDKHQ 223

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BLAST of Carg05942 vs. NCBI nr
Match: XP_022938460.1 (reticulon-like protein B16 [Cucurbita moschata] >KAG6578480.1 Reticulon-like protein B16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016043.1 Reticulon-like protein B16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.1 bits (954), Expect = 3.4e-99
Identity = 192/223 (86.10%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDN  SAG V+ DGKDIAC SCDR  SLHQ MGGGKAAD+LLWKQRHVSFGIVVVATVF
Sbjct: 1   MVDNCDSAGNVDADGKDIACTSCDRPPSLHQSMGGGKAADILLWKQRHVSFGIVVVATVF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSG+PLLT  SDVLLVLVVLLFLRANFAA R K +QTLPQLVLSEEFVD+VAASF
Sbjct: 61  WLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           RAKINNALL+AHDITLGNDFKLFFR+VICLWLLSVLGSYLSFFTFAYIGTIISIT+PALY
Sbjct: 121 RAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITIPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           +KY+KHV+R  GMI Q+FRKHY+VMDESVFSRLPGS SKDK Q
Sbjct: 181 SKYDKHVDRCCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKHQ 223

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BLAST of Carg05942 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-64
Identity = 113/198 (57.07%), Postives = 162/198 (81.82%), Query Frame = 0


Query: 25  RQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQ+++HQ+MGGGKAAD+LLW++RH+S G+++++TV WL+ E SG+P L++SSDVLL++++
Sbjct: 28  RQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIM 87

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFF 144
           + F+ A  +A R++ + +LP+LVLSEE V+S AASFR K+N+ L+MAHD+T+GNDF+LFF
Sbjct: 88  ISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFF 147

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKV 204
           +VVICLWLLS +GSY+S  T  YIGTI+S+T+PALY+KY   V++  G I +    HYK+
Sbjct: 148 KVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKI 207

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DE+V SRL  S SKDKD
Sbjct: 208 VDENVISRLSWSLSKDKD 225

[Close]

BLAST of Carg05942 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.7e-30
Identity = 73/197 (37.06%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 25  RQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGGK AD+ +WK + +S G+   ATV W+L E     LLT+   V++V + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFF 144
           +LFL +N     HK    +P++ + EE +  +A+  R +IN  +    +I  G D K F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKV 204
             +  LW+LS+LG   SF T AYI  ++  TVP  Y+KY   V+ Y      E +K Y V
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 205 MDESVFSRLPGSFSKDK 222
           +D  VFS++P    KDK
Sbjct: 252 LDAKVFSKIPRGPLKDK 268

[Close]

BLAST of Carg05942 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.1e-27
Identity = 68/197 (34.52%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 25  RQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGG  ADV LW+ + +S  ++ VAT  W+L E      L++   +L+  + 
Sbjct: 55  REKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALA 114

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFF 144
            LFL +N  A  +K    +P++ + EE    + ++ R ++N A ++   I LG D K F 
Sbjct: 115 ALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFL 174

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKV 204
            VV  LW++SV+G++ +F T  YI  ++  TVP LY K+   V+       +E +KHY V
Sbjct: 175 MVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMV 234

Query: 205 MDESVFSRLPGSFSKDK 222
            DE V S+LP +  K K
Sbjct: 235 FDEKVLSKLPVASLKAK 251

[Close]

BLAST of Carg05942 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-27
Identity = 73/223 (32.74%), Postives = 117/223 (52.47%), Query Frame = 0


Query: 3   DNSGSAGTVEGDGKDIACISC------DRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVV 62
           D+S S+ +   D K+ A +         R+  LH+  GGGK AD+ LW+ + VS G++  
Sbjct: 23  DDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGA 82

Query: 63  ATVFWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSV 122
           ATV W+L E     LLT+   + ++ + +LFL ++ +   HK    +P++ + E+ V  +
Sbjct: 83  ATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQL 142

Query: 123 AASFRAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITV 182
           A+  R +IN    +  DI  G D K F  V+  LW+LS +GS  +F T  YI T++  T+
Sbjct: 143 ASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTI 202

Query: 183 PALYNKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSK 220
           P LY KY   V+ +     +E +K Y   D  V S++     K
Sbjct: 203 PVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 245

[Close]

BLAST of Carg05942 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 71/197 (36.04%), Postives = 113/197 (57.36%), Query Frame = 0


Query: 25  RQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGGK ADV LW+ + +S  ++ VAT  W+L E     LL++   + ++ + 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALG 114

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFF 144
            LFL +N   L +K    +P++ + EE    VA+S R ++N A ++   I LG D K F 
Sbjct: 115 GLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFL 174

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKV 204
            VV+ LW++SV+G++ +F T  YI  +I  TVP LY K+   V+       +E +K Y V
Sbjct: 175 MVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVV 234

Query: 205 MDESVFSRLPGSFSKDK 222
            DE V S++P +  K K
Sbjct: 235 FDEKVLSKIPIASLKAK 251

[Close]

BLAST of Carg05942 vs. ExPASy TrEMBL
Match: A0A6J1EAS5 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430876 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDNSGSAGTVEGDGKDIACISCDRQVSLHQ MGGGKAADVLLWKQRHVSFGIVVVAT+F
Sbjct: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATMF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF
Sbjct: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           RAKIN+ALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFT AYIGTIISITVPALY
Sbjct: 121 RAKINSALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTLAYIGTIISITVPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           NKY+KHV+RYFGMIFQEFRKHYKVMDESVFSRLPGSFSK KDQ
Sbjct: 181 NKYDKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKHKDQ 223

[Close]

BLAST of Carg05942 vs. ExPASy TrEMBL
Match: A0A6J1K105 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.6e-100
Identity = 193/223 (86.55%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDN  SAG V+GDGKDIAC SCDR  SLHQ MGGGKAAD+LLWKQRHVSFGIVVVATVF
Sbjct: 1   MVDNCDSAGNVDGDGKDIACTSCDRPASLHQSMGGGKAADILLWKQRHVSFGIVVVATVF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSG+PLLT  SDVLLVLVVLLFLRANFAA R K +QTLPQLVLSEEFVD+VAASF
Sbjct: 61  WLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           RAKINNALL+AHDITLGNDFKLFFR+VICLWLLSVLGSYLSFFTFAYIGTIISITVPALY
Sbjct: 121 RAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           +KY+KHV+R  GMI Q+FRKHY+VMDE VFSRLPGS SKDK Q
Sbjct: 181 SKYDKHVDRCCGMIRQQFRKHYRVMDERVFSRLPGSLSKDKHQ 223

[Close]

BLAST of Carg05942 vs. ExPASy TrEMBL
Match: A0A6J1FJV2 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444692 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.6e-99
Identity = 192/223 (86.10%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MVDNSGSAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVF 60
           MVDN  SAG V+ DGKDIAC SCDR  SLHQ MGGGKAAD+LLWKQRHVSFGIVVVATVF
Sbjct: 1   MVDNCDSAGNVDADGKDIACTSCDRPPSLHQSMGGGKAADILLWKQRHVSFGIVVVATVF 60

Query: 61  WLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASF 120
           WLLIEHSG+PLLT  SDVLLVLVVLLFLRANFAA R K +QTLPQLVLSEEFVD+VAASF
Sbjct: 61  WLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAASF 120

Query: 121 RAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALY 180
           RAKINNALL+AHDITLGNDFKLFFR+VICLWLLSVLGSYLSFFTFAYIGTIISIT+PALY
Sbjct: 121 RAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITIPALY 180

Query: 181 NKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           +KY+KHV+R  GMI Q+FRKHY+VMDESVFSRLPGS SKDK Q
Sbjct: 181 SKYDKHVDRCCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKHQ 223

[Close]

BLAST of Carg05942 vs. ExPASy TrEMBL
Match: A0A5A7U9N4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001790 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.0e-93
Identity = 181/224 (80.80%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MVDNSG-SAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATV 60
           MVD S  +AG VE DGKDI C SCDRQ  LHQ MGGGKAAD+LLWKQ HVSFGI+VV+TV
Sbjct: 1   MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTV 60

Query: 61  FWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAAS 120
           FWLLIEHSG+PLLT  SDVLL+LVVLLFLRAN+AA R+K +QTLPQLVLSEEFV++VAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 FRAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180
            RAKINN LLMAHDITLGNDFKLFFR+VI LWLLSV+GSY+SFFTFAYIGTIISIT+PAL
Sbjct: 121 LRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPAL 180

Query: 181 YNKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           Y+KY+KHV+RY GMI Q+FRKHY+VMDESVFSRLPG+ SKDK+Q
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]

BLAST of Carg05942 vs. ExPASy TrEMBL
Match: A0A1S3C5B5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.0e-93
Identity = 181/224 (80.80%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MVDNSG-SAGTVEGDGKDIACISCDRQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATV 60
           MVD S  +AG VE DGKDI C SCDRQ  LHQ MGGGKAAD+LLWKQ HVSFGI+VV+TV
Sbjct: 1   MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTV 60

Query: 61  FWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAAS 120
           FWLLIEHSG+PLLT  SDVLL+LVVLLFLRAN+AA R+K +QTLPQLVLSEEFV++VAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 FRAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180
            RAKINN LLMAHDITLGNDFKLFFR+VI LWLLSV+GSY+SFFTFAYIGTIISIT+PAL
Sbjct: 121 LRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPAL 180

Query: 181 YNKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           Y+KY+KHV+RY GMI Q+FRKHY+VMDESVFSRLPG+ SKDK+Q
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]

BLAST of Carg05942 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 246.1 bits (627), Expect = 2.6e-65
Identity = 113/198 (57.07%), Postives = 162/198 (81.82%), Query Frame = 0


Query: 25  RQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQ+++HQ+MGGGKAAD+LLW++RH+S G+++++TV WL+ E SG+P L++SSDVLL++++
Sbjct: 28  RQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIM 87

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFF 144
           + F+ A  +A R++ + +LP+LVLSEE V+S AASFR K+N+ L+MAHD+T+GNDF+LFF
Sbjct: 88  ISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFF 147

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKV 204
           +VVICLWLLS +GSY+S  T  YIGTI+S+T+PALY+KY   V++  G I +    HYK+
Sbjct: 148 KVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKI 207

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DE+V SRL  S SKDKD
Sbjct: 208 VDENVISRLSWSLSKDKD 225

[Close]

BLAST of Carg05942 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 241.5 bits (615), Expect = 6.4e-64
Identity = 113/199 (56.78%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 25  RQVSLHQYMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQ+++HQ+MGGGKAAD+LLW++RH+S G+++++TV WL+ E SG+P L++SSDVLL++++
Sbjct: 28  RQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIM 87

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFF 144
           + F+ A  +A R++ + +LP+LVLSEE V+S AASFR K+N+ L+MAHD+T+GNDF+LFF
Sbjct: 88  ISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFF 147

Query: 145 R-VVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYK 204
           + VVICLWLLS +GSY+S  T  YIGTI+S+T+PALY+KY   V++  G I +    HYK
Sbjct: 148 KQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYK 207

Query: 205 VMDESVFSRLPGSFSKDKD 223
           ++DE+V SRL  S SKDKD
Sbjct: 208 IVDENVISRLSWSLSKDKD 226

[Close]

BLAST of Carg05942 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein )

HSP 1 Score: 228.8 bits (582), Expect = 4.3e-60
Identity = 113/221 (51.13%), Postives = 162/221 (73.30%), Query Frame = 0


Query: 25  RQVSLHQYMGGGK----------------------AADVLLWKQRHVSFGIVVVATVFWL 84
           RQ+++HQ+MGGGK                      AAD+LLW++RH+S G+++++TV WL
Sbjct: 28  RQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRRRHLSLGVIIISTVAWL 87

Query: 85  LIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRA 144
           + E SG+P L++SSDVLL+++++ F+ A  +A R++ + +LP+LVLSEE V+S AASFR 
Sbjct: 88  IFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRI 147

Query: 145 KINNALLMAHDITLGNDFKLFFR-VVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYN 204
           K+N+ L+MAHD+T+GNDF+LFF+ VVICLWLLS +GSY+S  T  YIGTI+S+T+PALY+
Sbjct: 148 KLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYS 207

Query: 205 KYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKD 223
           KY   V++  G I +    HYK++DE+V SRL  S SKDKD
Sbjct: 208 KYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 248

[Close]

BLAST of Carg05942 vs. TAIR 10
Match: AT3G10915.3 (Reticulon family protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.0e-58
Identity = 104/185 (56.22%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 38  AADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRH 97
           AAD+LLW++RH+S G+++++TV WL+ E SG+P L++SSDVLL+++++ F+ A  +A R+
Sbjct: 8   AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 67

Query: 98  KPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLG 157
           + + +LP+LVLSEE V+S AASFR K+N+ L+MAHD+T+GNDF+LFF+VVICLWLLS +G
Sbjct: 68  RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIG 127

Query: 158 SYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSF 217
           SY+S  T  YIGTI+S+T+PALY+KY   V++  G I +    HYK++DE+V SRL  S 
Sbjct: 128 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 187

Query: 218 SKDKD 223
           SKDKD
Sbjct: 188 SKDKD 192

[Close]

BLAST of Carg05942 vs. TAIR 10
Match: AT3G10915.6 (Reticulon family protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.0e-58
Identity = 104/185 (56.22%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 38  AADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRH 97
           AAD+LLW++RH+S G+++++TV WL+ E SG+P L++SSDVLL+++++ F+ A  +A R+
Sbjct: 9   AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 68

Query: 98  KPIQTLPQLVLSEEFVDSVAASFRAKINNALLMAHDITLGNDFKLFFRVVICLWLLSVLG 157
           + + +LP+LVLSEE V+S AASFR K+N+ L+MAHD+T+GNDF+LFF+VVICLWLLS +G
Sbjct: 69  RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIG 128

Query: 158 SYLSFFTFAYIGTIISITVPALYNKYNKHVNRYFGMIFQEFRKHYKVMDESVFSRLPGSF 217
           SY+S  T  YIGTI+S+T+PALY+KY   V++  G I +    HYK++DE+V SRL  S 
Sbjct: 129 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 188

Query: 218 SKDKD 223
           SKDKD
Sbjct: 189 SKDKD 193

The following BLAST results are available for this feature:

BLAST of Carg05942 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033265.1	9.5e-118	100.00	Reticulon-like protein B16 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529321.1	5.8e-115	98.21	reticulon-like protein B16 [Cucurbita pepo subsp. pepo]	[more]
XP_022923115.1	4.1e-113	96.86	reticulon-like protein B16 [Cucurbita moschata]	[more]
XP_022993764.1	1.2e-99	86.55	reticulon-like protein B16 [Cucurbita maxima]	[more]
XP_022938460.1	3.4e-99	86.10	reticulon-like protein B16 [Cucurbita moschata] >KAG6578480.1 Reticulon-like pro...	[more]

BLAST of Carg05942 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH6	3.7e-64	57.07	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q9SUT9	7.7e-30	37.06	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q6DBN4	2.1e-27	34.52	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
Q9SH59	2.8e-27	32.74	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]
O82352	1.4e-26	36.04	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]

BLAST of Carg05942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAS5	2.0e-113	96.86	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430876 PE=4 SV=1	[more]
A0A6J1K105	5.6e-100	86.55	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1	[more]
A0A6J1FJV2	1.6e-99	86.10	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444692 PE=4 SV=1	[more]
A0A5A7U9N4	3.0e-93	80.80	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3C5B5	3.0e-93	80.80	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1	[more]

BLAST of Carg05942 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10915.2	2.6e-65	57.07	Reticulon family protein	[more]
AT3G10915.4	6.4e-64	56.78	Reticulon family protein	[more]
AT3G10915.5	4.3e-60	51.13	Reticulon family protein	[more]
AT3G10915.3	4.0e-58	56.22	Reticulon family protein	[more]
AT3G10915.6	4.0e-58	56.22	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 39..193 e-value: 8.2E-43 score: 146.1
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 38..223 score: 29.573734
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 21..222
None	No IPR available	PANTHER	PTHR10994:SF67	RETICULON-LIKE PROTEIN B16	coord: 21..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05942-RA	Carg05942-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane