Carg05941 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05941
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Expansin
Location	Carg_Chr04: 21230065 .. 21230998 (+)
RNA-Seq Expression	Carg05941
Synteny	Carg05941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCTTACCAATCTCTCCTCTCTCTGTTTTTCTCCTAATTTTCCTCCCTGCAATCTCCGCCGACTACGGCGGGTTGCAGTCAGGCCACGCTACGTTCTACGGCGGCGGCGACGGATCCGGGACAATGGGTAATTGATTAAACTGAACTGTCCTTCGTTTTTTAATTTTTTTTTTTTAATTTGTTGGGTTCTGTGTGGTAATGGGGAATTGGGTATTTGAACAGGTGGGGCTTGTGGGTATGGGGATTTGTACAACCAAGGATACGGAACGAACACGGCGGCGCTGAGTACGGCTCTGTATAACGATGGGCTAAGTTGTGGTTCTTGCTATGAGATTACTTGCACAAGTGATCCCAATTGGTGTCTTCCTGGAAAAATCATTGTGACTGCCACTAATTTTTGTCCGCCTAACTACGCTCTGCCCAATGATGATGGCGGCTGGTGCAACCCTCCTCTGCAGCACTTTGATTTGGCTCAGCCTGCTTTTCTTCAGATTGCTCAGTACAGTGCTGGCATTGTTCCCGTCTCCTTCCGTAGGTGAGAGTCCCTAAAAATTAACACACATGGTTTAAATCTCTATCTTTACTTTCTAATTTTTTATTTTTTATTTTTGTAATGAATAACAGAGTGCCATGCGTGAAGAAGGGAGGAATAAGGTTCACGATCAAGGGCCATTCATACTTCAACTTGGTGCTGATCACCAACGTCGGCGGCGCCGGCGACGTCCATTCGGTGTCGATCAAAGGATCCAATACAGAATGGCAAGCCATGTCTAGAAATTGGGGACAAAACTGGCAGAGCAACAATTACTTGGACGGACAAAGCCTCTCTTTCCAAGTCACCACCAGCGACGGCCGTACCGTCACCAGCTACGACGTCGTTCCGGGCAACTGGCAGTTCGGTCAGACCTTTGAGGGTGCCCAGTTCTGA

mRNA sequence

ATGGCGTCCTTACCAATCTCTCCTCTCTCTGTTTTTCTCCTAATTTTCCTCCCTGCAATCTCCGCCGACTACGGCGGGTTGCAGTCAGGCCACGCTACGTTCTACGGCGGCGGCGACGGATCCGGGACAATGGGTGGGGCTTGTGGGTATGGGGATTTGTACAACCAAGGATACGGAACGAACACGGCGGCGCTGAGTACGGCTCTGTATAACGATGGGCTAAGTTGTGGTTCTTGCTATGAGATTACTTGCACAAGTGATCCCAATTGGTGTCTTCCTGGAAAAATCATTGTGACTGCCACTAATTTTTGTCCGCCTAACTACGCTCTGCCCAATGATGATGGCGGCTGGTGCAACCCTCCTCTGCAGCACTTTGATTTGGCTCAGCCTGCTTTTCTTCAGATTGCTCAGTACAGTGCTGGCATTGTTCCCGTCTCCTTCCGTAGAGTGCCATGCGTGAAGAAGGGAGGAATAAGGTTCACGATCAAGGGCCATTCATACTTCAACTTGGTGCTGATCACCAACGTCGGCGGCGCCGGCGACGTCCATTCGGTGTCGATCAAAGGATCCAATACAGAATGGCAAGCCATGTCTAGAAATTGGGGACAAAACTGGCAGAGCAACAATTACTTGGACGGACAAAGCCTCTCTTTCCAAGTCACCACCAGCGACGGCCGTACCGTCACCAGCTACGACGTCGTTCCGGGCAACTGGCAGTTCGGTCAGACCTTTGAGGGTGCCCAGTTCTGA

Coding sequence (CDS)

ATGGCGTCCTTACCAATCTCTCCTCTCTCTGTTTTTCTCCTAATTTTCCTCCCTGCAATCTCCGCCGACTACGGCGGGTTGCAGTCAGGCCACGCTACGTTCTACGGCGGCGGCGACGGATCCGGGACAATGGGTGGGGCTTGTGGGTATGGGGATTTGTACAACCAAGGATACGGAACGAACACGGCGGCGCTGAGTACGGCTCTGTATAACGATGGGCTAAGTTGTGGTTCTTGCTATGAGATTACTTGCACAAGTGATCCCAATTGGTGTCTTCCTGGAAAAATCATTGTGACTGCCACTAATTTTTGTCCGCCTAACTACGCTCTGCCCAATGATGATGGCGGCTGGTGCAACCCTCCTCTGCAGCACTTTGATTTGGCTCAGCCTGCTTTTCTTCAGATTGCTCAGTACAGTGCTGGCATTGTTCCCGTCTCCTTCCGTAGAGTGCCATGCGTGAAGAAGGGAGGAATAAGGTTCACGATCAAGGGCCATTCATACTTCAACTTGGTGCTGATCACCAACGTCGGCGGCGCCGGCGACGTCCATTCGGTGTCGATCAAAGGATCCAATACAGAATGGCAAGCCATGTCTAGAAATTGGGGACAAAACTGGCAGAGCAACAATTACTTGGACGGACAAAGCCTCTCTTTCCAAGTCACCACCAGCGACGGCCGTACCGTCACCAGCTACGACGTCGTTCCGGGCAACTGGCAGTTCGGTCAGACCTTTGAGGGTGCCCAGTTCTGA

Protein sequence

MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQF

Homology

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BLAST of Carg05941 vs. NCBI nr
Match: KAG6602585.1 (Expansin-A8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033264.1 Expansin-A8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 521.5 bits (1342), Expect = 3.9e-144
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT
Sbjct: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP
Sbjct: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF
Sbjct: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240

Query: 241 GQTFEGAQF 250
           GQTFEGAQF
Sbjct: 241 GQTFEGAQF 249

[Close]

BLAST of Carg05941 vs. NCBI nr
Match: XP_022923102.1 (expansin-A4-like [Cucurbita moschata])

HSP 1 Score: 514.6 bits (1324), Expect = 4.7e-142
Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MASLPISPLSV LLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT
Sbjct: 1   MASLPISPLSVLLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP
Sbjct: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DV SVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDV PGNWQF
Sbjct: 181 DVQSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVAPGNWQF 240

Query: 241 GQTFEGAQF 250
           GQTFEGAQF
Sbjct: 241 GQTFEGAQF 249

[Close]

BLAST of Carg05941 vs. NCBI nr
Match: XP_023529284.1 (expansin-A2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.4 bits (1313), Expect = 8.9e-141
Identity = 243/249 (97.59%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MA LPISPLSV LL+ LPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT
Sbjct: 1   MAPLPISPLSVLLLVLLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP
Sbjct: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDL+QPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLSQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DV SVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF
Sbjct: 181 DVQSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240

Query: 241 GQTFEGAQF 250
           GQTFEGAQF
Sbjct: 241 GQTFEGAQF 249

[Close]

BLAST of Carg05941 vs. NCBI nr
Match: XP_022989969.1 (expansin-A8-like [Cucurbita maxima])

HSP 1 Score: 504.6 bits (1298), Expect = 4.9e-139
Identity = 239/249 (95.98%), Postives = 244/249 (97.99%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MA LPISPLSV LL+FLPAISADYGGLQSGHATFYGGGD SGTMGGACGYGDLY+QGYGT
Sbjct: 1   MAPLPISPLSVLLLVFLPAISADYGGLQSGHATFYGGGDASGTMGGACGYGDLYSQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP
Sbjct: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLA+PAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAEPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DV SVSIKGSNTEWQAMSRNWGQNWQSNNY +GQSLSFQVTTSDGRTVTSYD+VPGNWQF
Sbjct: 181 DVQSVSIKGSNTEWQAMSRNWGQNWQSNNYFNGQSLSFQVTTSDGRTVTSYDIVPGNWQF 240

Query: 241 GQTFEGAQF 250
           GQTFEGAQF
Sbjct: 241 GQTFEGAQF 249

[Close]

BLAST of Carg05941 vs. NCBI nr
Match: XP_023550806.1 (expansin-A8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.8 bits (1179), Expect = 3.1e-125
Identity = 216/249 (86.75%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           M S PIS  SV  L+F+PAISADYGG+QSGHATFYGGGD SGTMGGACGYG+LY+QGYGT
Sbjct: 1   MVSSPISAFSVLFLLFIPAISADYGGVQSGHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTAL+N+GLSCGSCYEITC+SDP WCLPGKIIVTATNFCPPN AL N++GGWCNP
Sbjct: 61  NTAALSTALFNNGLSCGSCYEITCSSDPKWCLPGKIIVTATNFCPPNLALSNNNGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLA+PAFLQIAQY AGIVPVSFRRVPCVKKGGIR TI GHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAEPAFLQIAQYHAGIVPVSFRRVPCVKKGGIRLTINGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DVHSVSIKGS T WQAMSRNWGQNWQSNNYL+GQSLSFQ+TTSDGRTVTSY+ VP NWQF
Sbjct: 181 DVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQITTSDGRTVTSYNAVPANWQF 240

Query: 241 GQTFEGAQF 250
           GQTFE  QF
Sbjct: 241 GQTFEAGQF 249

[Close]

BLAST of Carg05941 vs. ExPASy Swiss-Prot
Match: O22874 (Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.8e-110
Identity = 188/247 (76.11%), Postives = 210/247 (85.02%), Query Frame = 0


Query: 4   LPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTA 63
           L  S +S+  ++FL     D GG Q GHATFYGG D SGTMGGACGYG+LY QGYGTNTA
Sbjct: 7   LKYSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTA 66

Query: 64  ALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQ 123
           ALSTAL+N+GL+CG+CYE+ C  DP WCL   I VTATNFCPPN  L ND+GGWCNPPLQ
Sbjct: 67  ALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQ 126

Query: 124 HFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVH 183
           HFDLA+PAFLQIAQY AGIVPVSFRRVPC+KKGGIRFTI GHSYFNLVLI+NVGGAGDVH
Sbjct: 127 HFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVH 186

Query: 184 SVSIKGSNTE-WQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQ 243
           +VSIKGS T+ WQAMSRNWGQNWQSN+Y++ QSLSFQVTTSDGRT+ S DV P NWQFGQ
Sbjct: 187 AVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQ 246

Query: 244 TFEGAQF 250
           T++G QF
Sbjct: 247 TYQGGQF 253

[Close]

BLAST of Carg05941 vs. ExPASy Swiss-Prot
Match: Q40636 (Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 398.7 bits (1023), Expect = 5.0e-110
Identity = 183/229 (79.91%), Postives = 198/229 (86.46%), Query Frame = 0


Query: 21  SADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTALYNDGLSCGSCY 80
           +ADYG  QS HATFYGGGD SGTMGGACGYG+LY+ GYGTNTAALST L+NDG +CGSCY
Sbjct: 23  AADYGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCY 82

Query: 81  EITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLAQPAFLQIAQYSA 140
           E+ C +D  WCLPG + VTATN CPPNYALPNDDGGWCNPP  HFD+A+PAFLQI  Y A
Sbjct: 83  ELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRA 142

Query: 141 GIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIKGSNTEWQAMSRN 200
           GIVPVS+RRVPCVKKGGIRFTI GHSYFNLVL+TNV G GDV SVSIKGS+T WQ MSRN
Sbjct: 143 GIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRN 202

Query: 201 WGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQF 250
           WGQNWQSN+YLDGQSLSFQV  SDGRTVTS +VVP  WQFGQTFEG QF
Sbjct: 203 WGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251

[Close]

BLAST of Carg05941 vs. ExPASy Swiss-Prot
Match: A2Y5R6 (Expansin-A4 OS=Oryza sativa subsp. indica OX=39946 GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.7e-108
Identity = 187/241 (77.59%), Postives = 204/241 (84.65%), Query Frame = 0


Query: 11  VFLLIFL--PAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTA 70
           V  L+FL   A +A YGG QS HATFYGGGD SGTMGGACGYG+LY+QGYGTNTAALSTA
Sbjct: 6   VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 65

Query: 71  LYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLA 130
           L+NDG +CGSCYE+ C +  + CLPG I VTATNFCPPNY LP+DDGGWCNPP  HFD+A
Sbjct: 66  LFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMA 125

Query: 131 QPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIK 190
           +PAFL IAQY AGIVPVSFRRVPCVKKGG+RFT+ GHSYFNLVL+TNV GAGDV SVSIK
Sbjct: 126 EPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIK 185

Query: 191 GSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQ 250
           GS T WQ MSRNWGQNWQSN +LDGQSLSFQVT SDGRTVTS +V    WQFGQTFEG Q
Sbjct: 186 GSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245

[Close]

BLAST of Carg05941 vs. ExPASy Swiss-Prot
Match: Q0DHB7 (Expansin-A4 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.7e-108
Identity = 187/241 (77.59%), Postives = 204/241 (84.65%), Query Frame = 0


Query: 11  VFLLIFL--PAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTA 70
           V  L+FL   A +A YGG QS HATFYGGGD SGTMGGACGYG+LY+QGYGTNTAALSTA
Sbjct: 6   VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 65

Query: 71  LYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLA 130
           L+NDG +CGSCYE+ C +  + CLPG I VTATNFCPPNY LP+DDGGWCNPP  HFD+A
Sbjct: 66  LFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMA 125

Query: 131 QPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIK 190
           +PAFL IAQY AGIVPVSFRRVPCVKKGG+RFT+ GHSYFNLVL+TNV GAGDV SVSIK
Sbjct: 126 EPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIK 185

Query: 191 GSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQ 250
           GS T WQ MSRNWGQNWQSN +LDGQSLSFQVT SDGRTVTS +V    WQFGQTFEG Q
Sbjct: 186 GSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245

[Close]

BLAST of Carg05941 vs. ExPASy Swiss-Prot
Match: Q9LDR9 (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.2e-105
Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 15  IFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTALYNDGL 74
           +   ++S   GG  + HATFYGGGD SGTMGGACGYG+LY+QGYGT+TAALSTAL+N+GL
Sbjct: 14  VMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGL 73

Query: 75  SCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLAQPAFLQ 134
           SCGSC+EI C +D  WCLPG I+VTATNFCPPN AL N++GGWCNPPL+HFDLAQP F +
Sbjct: 74  SCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQR 133

Query: 135 IAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIKGSNTEW 194
           IAQY AGIVPVS+RRVPC ++GGIRFTI GHSYFNLVLITNVGGAGDVHS +IKGS T W
Sbjct: 134 IAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVW 193

Query: 195 QAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQF 250
           QAMSRNWGQNWQSN+YL+GQ+LSF+VTTSDGRTV S++  P  W +GQTF G QF
Sbjct: 194 QAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 248

[Close]

BLAST of Carg05941 vs. ExPASy TrEMBL
Match: A0A6J1E585 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111430869 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.3e-142
Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MASLPISPLSV LLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT
Sbjct: 1   MASLPISPLSVLLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP
Sbjct: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DV SVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDV PGNWQF
Sbjct: 181 DVQSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVAPGNWQF 240

Query: 241 GQTFEGAQF 250
           GQTFEGAQF
Sbjct: 241 GQTFEGAQF 249

[Close]

BLAST of Carg05941 vs. ExPASy TrEMBL
Match: A0A6J1JQT6 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111487000 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.4e-139
Identity = 239/249 (95.98%), Postives = 244/249 (97.99%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MA LPISPLSV LL+FLPAISADYGGLQSGHATFYGGGD SGTMGGACGYGDLY+QGYGT
Sbjct: 1   MAPLPISPLSVLLLVFLPAISADYGGLQSGHATFYGGGDASGTMGGACGYGDLYSQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP
Sbjct: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLA+PAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAEPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DV SVSIKGSNTEWQAMSRNWGQNWQSNNY +GQSLSFQVTTSDGRTVTSYD+VPGNWQF
Sbjct: 181 DVQSVSIKGSNTEWQAMSRNWGQNWQSNNYFNGQSLSFQVTTSDGRTVTSYDIVPGNWQF 240

Query: 241 GQTFEGAQF 250
           GQTFEGAQF
Sbjct: 241 GQTFEGAQF 249

[Close]

BLAST of Carg05941 vs. ExPASy TrEMBL
Match: A0A6J1JXM3 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111489232 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.9e-125
Identity = 216/249 (86.75%), Postives = 229/249 (91.97%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MAS PIS  SV  L+F+P ISADYGG+QSGHATFYGGGD SGTMGGACGYG+LY+QGYGT
Sbjct: 1   MASSPISAFSVLFLLFIPVISADYGGVQSGHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTAL+N+GLSCGSCYEITC+SDP WCLPGKIIVTATNFCPPN AL N +GGWCNP
Sbjct: 61  NTAALSTALFNNGLSCGSCYEITCSSDPKWCLPGKIIVTATNFCPPNLALSNSNGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLA+PAFLQIAQY AGIVPVSFRRVPCVKKGGIR TI GHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAEPAFLQIAQYHAGIVPVSFRRVPCVKKGGIRLTINGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DVHSVSIKGS T WQAMSRNWGQNWQSNNYL+GQSLSFQ+TTSDGRTVTSY+ VP NWQF
Sbjct: 181 DVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQITTSDGRTVTSYNAVPANWQF 240

Query: 241 GQTFEGAQF 250
           GQTFE  QF
Sbjct: 241 GQTFEAGQF 249

[Close]

BLAST of Carg05941 vs. ExPASy TrEMBL
Match: A0A5A7UC43 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001800 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.7e-125
Identity = 217/249 (87.15%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MA  P+S LS+F LIFLP+ISADY     GHATFYGGGD SGTMGGACGYG+LY+QGYGT
Sbjct: 1   MAPSPLSSLSIFFLIFLPSISADY-----GHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTAL+N+GLSCGSCYEITC SDP WCLPGKIIVTATNFCPPN+AL ND+GGWCNP
Sbjct: 61  NTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLA+PAFLQIAQY AGIVPVSF+RVPC+KKGGIRFTI GHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DVHSVSIKGS T WQAMSRNWGQNWQSNNYL+GQSLSFQVTTSDGRTVTSYD VPGNWQF
Sbjct: 181 DVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPGNWQF 240

Query: 241 GQTFEGAQF 250
           GQTFEG QF
Sbjct: 241 GQTFEGGQF 244

[Close]

BLAST of Carg05941 vs. ExPASy TrEMBL
Match: A0A6J1FKR1 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111444890 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.7e-125
Identity = 216/249 (86.75%), Postives = 229/249 (91.97%), Query Frame = 0


Query: 1   MASLPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGT 60
           MAS PIS  SV  L+F+PAISADYGG+QSGHATFYGGGD SGTMGGACGYG+LY+QGYGT
Sbjct: 1   MASSPISAFSVIFLLFIPAISADYGGVQSGHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNP 120
           NTAALSTAL+N+GLSCGSCYEITC+SDP WCLPGKIIVTATNFCPPN AL N +GGWCNP
Sbjct: 61  NTAALSTALFNNGLSCGSCYEITCSSDPKWCLPGKIIVTATNFCPPNLALSNSNGGWCNP 120

Query: 121 PLQHFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAG 180
           PLQHFDLA+PAFLQIAQY AGIVPVSFRRV CVKKGGIR TI GHSYFNLVLITNVGGAG
Sbjct: 121 PLQHFDLAEPAFLQIAQYHAGIVPVSFRRVACVKKGGIRLTINGHSYFNLVLITNVGGAG 180

Query: 181 DVHSVSIKGSNTEWQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQF 240
           DVHSVSIKGS T WQAMSRNWGQNWQSNNYL+GQSLSFQ+TTSDGRTVTSY+ VP NWQF
Sbjct: 181 DVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQITTSDGRTVTSYNAVPANWQF 240

Query: 241 GQTFEGAQF 250
           GQTFE  QF
Sbjct: 241 GQTFEAGQF 249

[Close]

BLAST of Carg05941 vs. TAIR 10
Match: AT2G40610.1 (expansin A8 )

HSP 1 Score: 399.1 bits (1024), Expect = 2.7e-111
Identity = 188/247 (76.11%), Postives = 210/247 (85.02%), Query Frame = 0


Query: 4   LPISPLSVFLLIFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTA 63
           L  S +S+  ++FL     D GG Q GHATFYGG D SGTMGGACGYG+LY QGYGTNTA
Sbjct: 7   LKYSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTA 66

Query: 64  ALSTALYNDGLSCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQ 123
           ALSTAL+N+GL+CG+CYE+ C  DP WCL   I VTATNFCPPN  L ND+GGWCNPPLQ
Sbjct: 67  ALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQ 126

Query: 124 HFDLAQPAFLQIAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVH 183
           HFDLA+PAFLQIAQY AGIVPVSFRRVPC+KKGGIRFTI GHSYFNLVLI+NVGGAGDVH
Sbjct: 127 HFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVH 186

Query: 184 SVSIKGSNTE-WQAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQ 243
           +VSIKGS T+ WQAMSRNWGQNWQSN+Y++ QSLSFQVTTSDGRT+ S DV P NWQFGQ
Sbjct: 187 AVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQ 246

Query: 244 TFEGAQF 250
           T++G QF
Sbjct: 247 TYQGGQF 253

[Close]

BLAST of Carg05941 vs. TAIR 10
Match: AT1G26770.1 (expansin A10 )

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-106
Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 15  IFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTALYNDGL 74
           +   ++S   GG  + HATFYGGGD SGTMGGACGYG+LY+QGYGT+TAALSTAL+N+GL
Sbjct: 14  VMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGL 73

Query: 75  SCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLAQPAFLQ 134
           SCGSC+EI C +D  WCLPG I+VTATNFCPPN AL N++GGWCNPPL+HFDLAQP F +
Sbjct: 74  SCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQR 133

Query: 135 IAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIKGSNTEW 194
           IAQY AGIVPVS+RRVPC ++GGIRFTI GHSYFNLVLITNVGGAGDVHS +IKGS T W
Sbjct: 134 IAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVW 193

Query: 195 QAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQF 250
           QAMSRNWGQNWQSN+YL+GQ+LSF+VTTSDGRTV S++  P  W +GQTF G QF
Sbjct: 194 QAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 248

[Close]

BLAST of Carg05941 vs. TAIR 10
Match: AT1G26770.2 (expansin A10 )

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-106
Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 15  IFLPAISADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTALYNDGL 74
           +   ++S   GG  + HATFYGGGD SGTMGGACGYG+LY+QGYGT+TAALSTAL+N+GL
Sbjct: 24  VMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGL 83

Query: 75  SCGSCYEITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLAQPAFLQ 134
           SCGSC+EI C +D  WCLPG I+VTATNFCPPN AL N++GGWCNPPL+HFDLAQP F +
Sbjct: 84  SCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQR 143

Query: 135 IAQYSAGIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIKGSNTEW 194
           IAQY AGIVPVS+RRVPC ++GGIRFTI GHSYFNLVLITNVGGAGDVHS +IKGS T W
Sbjct: 144 IAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVW 203

Query: 195 QAMSRNWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQF 250
           QAMSRNWGQNWQSN+YL+GQ+LSF+VTTSDGRTV S++  P  W +GQTF G QF
Sbjct: 204 QAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 258

[Close]

BLAST of Carg05941 vs. TAIR 10
Match: AT5G05290.1 (expansin A2 )

HSP 1 Score: 380.9 bits (977), Expect = 7.6e-106
Identity = 176/230 (76.52%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 21  SADYGGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTALYNDGLSCGSCY 80
           S D GG + GHATFYGG D SGTMGGACGYG+L++QGYG  TAALSTAL+N G  CG+C+
Sbjct: 26  SDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACF 85

Query: 81  EITCTSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLAQPAFLQIAQYSA 140
           E+ C  DP WC+PG IIV+ATNFCPPN+AL ND+GGWCNPPL+HFDLA+PAFLQIAQY A
Sbjct: 86  ELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRA 145

Query: 141 GIVPVSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIKGSNT-EWQAMSR 200
           GIVPV+FRRVPC K GGIRFTI G+ YF+LVLITNVGGAGD+ +VS+KGS T +WQ+MSR
Sbjct: 146 GIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSR 205

Query: 201 NWGQNWQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQF 250
           NWGQNWQSN YL GQSLSFQVT SDGRTV SYDVVP +WQFGQTFEG QF
Sbjct: 206 NWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255

[Close]

BLAST of Carg05941 vs. TAIR 10
Match: AT1G69530.1 (expansin A1 )

HSP 1 Score: 379.4 bits (973), Expect = 2.2e-105
Identity = 173/224 (77.23%), Postives = 196/224 (87.50%), Query Frame = 0


Query: 25  GGLQSGHATFYGGGDGSGTMGGACGYGDLYNQGYGTNTAALSTALYNDGLSCGSCYEITC 84
           GG  + HATFYGGGD SGTMGGACGYG+LY+QGYGTNTAALSTAL+N+GLSCG+C+EI C
Sbjct: 25  GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRC 84

Query: 85  TSDPNWCLPGKIIVTATNFCPPNYALPNDDGGWCNPPLQHFDLAQPAFLQIAQYSAGIVP 144
            +D  WCLPG I+VTATNFCPPN ALPN+ GGWCNPP QHFDL+QP F +IAQY AGIVP
Sbjct: 85  QNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVP 144

Query: 145 VSFRRVPCVKKGGIRFTIKGHSYFNLVLITNVGGAGDVHSVSIKGSNTEWQAMSRNWGQN 204
           V++RRVPCV++GGIRFTI GHSYFNLVLITNVGGAGDVHS  +KGS T WQAMSRNWGQN
Sbjct: 145 VAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQN 204

Query: 205 WQSNNYLDGQSLSFQVTTSDGRTVTSYDVVPGNWQFGQTFEGAQ 249
           WQSN+YL+GQSLSF+VTTSDG+T+ S +V    W FGQTF GAQ
Sbjct: 205 WQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQ 248

The following BLAST results are available for this feature:

BLAST of Carg05941 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602585.1	3.9e-144	100.00	Expansin-A8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033264.1 Expan...	[more]
XP_022923102.1	4.7e-142	98.80	expansin-A4-like [Cucurbita moschata]	[more]
XP_023529284.1	8.9e-141	97.59	expansin-A2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989969.1	4.9e-139	95.98	expansin-A8-like [Cucurbita maxima]	[more]
XP_023550806.1	3.1e-125	86.75	expansin-A8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg05941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22874	3.8e-110	76.11	Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1	[more]
Q40636	5.0e-110	79.91	Expansin-A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA2 PE=2 SV=2	[more]
A2Y5R6	2.7e-108	77.59	Expansin-A4 OS=Oryza sativa subsp. indica OX=39946 GN=EXPA4 PE=2 SV=1	[more]
Q0DHB7	2.7e-108	77.59	Expansin-A4 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA4 PE=2 SV=1	[more]
Q9LDR9	2.2e-105	74.47	Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1	[more]

BLAST of Carg05941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E585	2.3e-142	98.80	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111430869 PE=3 SV=1	[more]
A0A6J1JQT6	2.4e-139	95.98	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111487000 PE=3 SV=1	[more]
A0A6J1JXM3	1.9e-125	86.75	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111489232 PE=3 SV=1	[more]
A0A5A7UC43	5.7e-125	87.15	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001800 PE=3...	[more]
A0A6J1FKR1	5.7e-125	86.75	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111444890 PE=3 SV=1	[more]

BLAST of Carg05941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40610.1	2.7e-111	76.11	expansin A8	[more]
AT1G26770.1	1.5e-106	74.47	expansin A10	[more]
AT1G26770.2	1.5e-106	74.47	expansin A10	[more]
AT5G05290.1	7.6e-106	76.52	expansin A2	[more]
AT1G69530.1	2.2e-105	77.23	expansin A1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 132..145 score: 73.33 coord: 84..95 score: 51.67 coord: 115..132 score: 80.74 coord: 168..189 score: 76.82 coord: 57..71 score: 85.56 coord: 96..106 score: 85.15 coord: 156..168 score: 78.72 coord: 203..224 score: 76.82 coord: 232..248 score: 59.8
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 194..208 score: 72.33 coord: 44..62 score: 72.11 coord: 140..156 score: 68.53 coord: 26..41 score: 56.25 coord: 66..84 score: 63.68 coord: 232..246 score: 55.5
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 62..147 e-value: 2.7E-55 score: 199.7
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 45..157 score: 30.094019
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 156..249 e-value: 1.7E-25 score: 90.8
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 154..246
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 18..152 e-value: 5.9E-44 score: 151.5
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 13..175
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 158..235 e-value: 9.4E-31 score: 105.7
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 167..246 score: 23.339989
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 62..147 e-value: 3.4E-22 score: 78.5
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 10..249
None	No IPR available	PANTHER	PTHR31867:SF176	EXPANSIN	coord: 10..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05941-RA	Carg05941-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane