Carg05909 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGGAATGAGATCATTGGCCGCCTCCGCCTCCGCCTCCGCCATGAAAACCGGCCATTACCACTTCTGGAACACTTCAGTACCTTATCTCTTCGGCGCAATAACGCTAACTCTGCTTCTCATCCTCACCGCATTGATTTTCCTCGTTTGCTCTTGCCGGAAACACTCTTCTTCTTCCGACGAAGAAGACCAGAAGACGAAGATCGATACGCCATCAGTAGCGGCGGACGATCCACAACCTAAAATCGTCGTCATAATGGCTGGAAATCACACGCCGACCTTCCTCGCTACTGCTACGCCTTCCGATTCTTCTAATTTCTCCCGATCGACAGAGCGATTTTGA ATGAGAGGAATGAGATCATTGGCCGCCTCCGCCTCCGCCTCCGCCATGAAAACCGGCCATTACCACTTCTGGAACACTTCAGTACCTTATCTCTTCGGCGCAATAACGCTAACTCTGCTTCTCATCCTCACCGCATTGATTTTCCTCGTTTGCTCTTGCCGGAAACACTCTTCTTCTTCCGACGAAGAAGACCAGAAGACGAAGATCGATACGCCATCAGTAGCGGCGGACGATCCACAACCTAAAATCGTCGTCATAATGGCTGGAAATCACACGCCGACCTTCCTCGCTACTGCTACGCCTTCCGATTCTTCTAATTTCTCCCGATCGACAGAGCGATTTTGA ATGAGAGGAATGAGATCATTGGCCGCCTCCGCCTCCGCCTCCGCCATGAAAACCGGCCATTACCACTTCTGGAACACTTCAGTACCTTATCTCTTCGGCGCAATAACGCTAACTCTGCTTCTCATCCTCACCGCATTGATTTTCCTCGTTTGCTCTTGCCGGAAACACTCTTCTTCTTCCGACGAAGAAGACCAGAAGACGAAGATCGATACGCCATCAGTAGCGGCGGACGATCCACAACCTAAAATCGTCGTCATAATGGCTGGAAATCACACGCCGACCTTCCTCGCTACTGCTACGCCTTCCGATTCTTCTAATTTCTCCCGATCGACAGAGCGATTTTGA MRGMRSLAASASASAMKTGHYHFWNTSVPYLFGAITLTLLLILTALIFLVCSCRKHSSSSDEEDQKTKIDTPSVAADDPQPKIVVIMAGNHTPTFLATATPSDSSNFSRSTERF Homology
BLAST of Carg05909 vs. NCBI nr
Match: KAG6602552.1 (Protein GLUTAMINE DUMPER 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033232.1 Protein GLUTAMINE DUMPER 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Carg05909 vs. NCBI nr
Match: XP_023545008.1 (protein GLUTAMINE DUMPER 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51 Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0
BLAST of Carg05909 vs. NCBI nr
Match: KAG6578523.1 (Protein GLUTAMINE DUMPER 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016084.1 Protein GLUTAMINE DUMPER 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33 Identity = 82/117 (70.09%), Postives = 96/117 (82.05%), Query Frame = 0
BLAST of Carg05909 vs. NCBI nr
Match: KAA0039409.1 (protein GLUTAMINE DUMPER 6-like [Cucumis melo var. makuwa] >TYK00596.1 protein GLUTAMINE DUMPER 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 2.2e-14 Identity = 54/88 (61.36%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Carg05909 vs. NCBI nr
Match: PSR87782.1 (Protein GLUTAMINE DUMPER like [Actinidia chinensis var. chinensis]) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-10 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy Swiss-Prot
Match: Q3EAV6 (Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana OX=3702 GN=GDU6 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07 Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy Swiss-Prot
Match: Q3E965 (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy Swiss-Prot
Match: Q9SW07 (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06 Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy Swiss-Prot
Match: Q8S8A0 (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana OX=3702 GN=GDU4 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05 Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy TrEMBL
Match: A0A5D3BQQ1 (Protein GLUTAMINE DUMPER 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002130 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14 Identity = 54/88 (61.36%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy TrEMBL
Match: A0A2R6P9V1 (Protein GLUTAMINE DUMPER like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30812 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.6e-11 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy TrEMBL
Match: A0A444WN66 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_Scaffold8g108414 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.7e-10 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy TrEMBL
Match: A0A061EGU8 (Glutamine dumper 4, putative OS=Theobroma cacao OX=3641 GN=TCM_019104 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.2e-10 Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of Carg05909 vs. ExPASy TrEMBL
Match: A0A1U7WCD1 (protein GLUTAMINE DUMPER 6-like OS=Nicotiana sylvestris OX=4096 GN=LOC104227139 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.2e-10 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of Carg05909 vs. TAIR 10
Match: AT3G30725.1 (glutamine dumper 6 ) HSP 1 Score: 57.4 bits (137), Expect = 8.8e-09 Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Carg05909 vs. TAIR 10
Match: AT5G24920.1 (glutamine dumper 5 ) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of Carg05909 vs. TAIR 10
Match: AT4G25760.1 (glutamine dumper 2 ) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07 Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Carg05909 vs. TAIR 10
Match: AT2G24762.1 (glutamine dumper 4 ) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06 Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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