Carg05897 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05897
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase
Location	Carg_Chr04: 20987428 .. 20990417 (-)
RNA-Seq Expression	Carg05897
Synteny	Carg05897

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTATATTCTCGCGATTTCCGTCTTCCAGGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTATCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGCGCTTCTATTTTTCTCCTTTTTCGTATGAATAGTTCAAGGGCATCCCGATGATCGCCCCAAATTTGTATTGTTCTGTATTGGGATTCTCAGTTTTTTTTCATGATTTGTACGTATTCATGGTCCGATCGTCCATTTTTTGAGTTTTTTCTTGTGGGATTGTCGTATAATTTCAATAGTTTTTGATGCTCATGATCAACTTGGTATGCTATTGATGTTGTCAAGGTATCTTGTTTCCTCCTCATCGAAGGAAAGAACATGTGTTTTCAGAGGTCACCCAGAAAAAAAAATCTCAATTTCTTTAGACGAGCGGTAATTTTGACGAAGATTATGGCATTTTATTAACCCTTTGATTGATTTCTGGCTGTTTCAACAAATTTTTGTTTCATTATTGTGATGATTGCAGCAAAGGATTGCTGCCGACAGATTTATGTTCCTTGAAATAATGCCGATTGTTGGTTTAATGAACGATCTTAGTAGAATTTTTTTGATTTGACTTGCTTTCTTGGCGATCGCATAGGCATTTATGCATCATAGTTGGTTTAAGGATAATCCCATGGGATCCTCATTTGATTATCAGTGTTACTGAACTGTGGCTGCTTATTTTACAGGTGAAAATCACAGTTTGAAAATCCAGTTTATTCAAATTGAAGAGGGAGGGTACTAGTTCGTGGAGGAAATAGTACTTCTGCGGGCTTATGTACTCTCGTATCCATTTGCCAACATAATCATTGGCCAATAATTTTGAACTTGAATGCAAGTGAATAGCTGAATTGATCTATCTGTTGACTTGGGAATCTGCTGGATTAGATAATCGAGAATTTTAAGAGATTTGTGGGCGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAACGCCGTAAGCCCTATTTTCGTTGCATTTTTTGCGATTGTGTCACTGTGAAGGATGAAAATTTCGTTATTTCATAAATAACGTGTTTTGTTCGAATGCTAATAATGGTGAAAATTCGAAGAAAATGTTGCGAACATTAATGCTTCTCACTTCATTGTATGCCATTGTATTGTGTTATTTGTTTGCGTTTGTCTTTCCATATTTTCTTGCTTTATGATGTGCGCGTAAATAAATATATATGACCCATAACACACATCAAATTATCATCTTCTTATGGAAAGCGCTTGTAAGTTGTTTCTCACGCGTCACAAGTGTTTAGCTGTAGTTACAAACTTTGTTCTTATGATAATCGTATGACTCTGCTTTCCGTCTTATTTTCTCTAGTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCGACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGGTTGATTTCTAGGCGCGAGAAGGGTTCAAGCCATTTACACGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGATTCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGGTCGATTTTTTTGATAACTTCATTTTATCCTTGATTTTATTTAATTGCTCATCAAAATCTATGATTTTGGCCCTCAATATTCTTGTTTTTTGAGCTTATAGGGGGATAAACAAGTTACTAATCCACACGTTTTTTGACATGCCGAAATTTCATTCTGCTCGTTAAATTTTCTTTTTTTTCCCTAGCAGAATATACCTCAGAGAATCCCAAGATAGTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTATGCCTCTTTTTCTCCATCATATCATATGAACTTGTTCAATCACTATCTCAAAGCCACCCTATTAGTTGCGTTCTAGTGACTCGGATTGATGTTCGGATCTTTTTATGTTTTGGAAGTTCTGTGTTTTGTAAGCGTCGCCATTATTTGGCAAAATATGACTTTATGATTTGACGCAATTGATTTTAAGATTAATATTTCTTGGTACTTTAGTATGGATTGAGCATAAGGACTATTCTGGATTTGCAGAACCATCGTGGTTCGTTTAGAAATTGAAAAAATGTCTAGTTAACATAGATGGTCTATACGATCCATTTATTTATGTCTATCCTATCCTTGTGTCATCTTCGCTCAGAACCGACTGATTAAGCTACGTTATAATAACTCCTATAAAAAAAAACTTGTAGAACATCAGAAGTTTAAGAGAACACATCATTTTTCTTTTTCTTATGTGCTTAGAATGGGATCACTCAATTTCATTTTTTGTTTTTGTTGATAACCTGAGGGTTCTCAAGCTAACCTGGGGGCACCTACACCTGCCCCTAGGATTGAAACTCCATGTGACCTCTGGGTAGGTGTCGTGCGCCTTTTGCGGAGGGGCCACCCCTTGGGCACTTGTTGATCACGTTTTGACCGTAAATATTTATGCTTGATTGATACACTACACCATTTTGTGATATTCGATTGGTCGGGTAGTGCTTCGGCGTTTTTTGGTATAATAACTGATGTTCTTTTCCTCAGCTCCTTCACTGGTGAAGCTTTGGGGAATGATCTTGAAACGCGATCCTTAG

mRNA sequence

TCCGTATATTCTCGCGATTTCCGTCTTCCAGGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTATCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGAAAATCACAGTTTGAAAATCCAGTTTATTCAAATTGAAGAGGGAGGGTACTAGTTCGTGGAGGAAATAGTACTTCTGCGGGCTTATGTACTCTCGTATCCATTTGCCAACATAATCATTGGCCAATAATTTTGAACTTGAATGCAAGTGAATAGCTGAATTGATCTATCTGTTGACTTGGGAATCTGCTGGATTAGATAATCGAGAATTTTAAGAGATTTGTGGGCGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAACGCCTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCGACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGGTTGATTTCTAGGCGCGAGAAGGGTTCAAGCCATTTACACGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGATTCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATATACCTCAGAGAATCCCAAGATAGTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTATGCCTCTTTTTCTCCATCATATCATATGAACTTGTTCAATCACTATCTCAAAGCCACCCTATTAGTTGCGTTCTAGTGACTCGGATTGATGTTCGGATCTTTTTATGTTTTGGAAGTTCTGTGTTTTCTCCTTCACTGGTGAAGCTTTGGGGAATGATCTTGAAACGCGATCCTTAG

Coding sequence (CDS)

ATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAACGCCTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCGACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGGTTGATTTCTAGGCGCGAGAAGGGTTCAAGCCATTTACACGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGATTCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATATACCTCAGAGAATCCCAAGATAGTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTATGCCTCTTTTTCTCCATCATATCATATGAACTTGTTCAATCACTATCTCAAAGCCACCCTATTAGTTGCGTTCTAGTGACTCGGATTGATGTTCGGATCTTTTTATGTTTTGGAAGTTCTGTGTTTTCTCCTTCACTGGTGAAGCTTTGGGGAATGATCTTGAAACGCGATCCTTAG

Protein sequence

MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGATSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRGEVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLFFSIISYELVQSLSQSHPISCVLVTRIDVRIFLCFGSSVFSPSLVKLWGMILKRDP

Homology

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BLAST of Carg05897 vs. NCBI nr
Match: KAG7033220.1 (E3 ubiquitin-protein ligase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 574.3 bits (1479), Expect = 5.6e-160
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLFFSIISYELVQSLSQSHP 240
           LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLFFSIISYELVQSLSQSHP
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLFFSIISYELVQSLSQSHP 240

Query: 241 ISCVLVTRIDVRIFLCFGSSVFSPSLVKLWGMILKRDP 279
           ISCVLVTRIDVRIFLCFGSSVFSPSLVKLWGMILKRDP
Sbjct: 241 ISCVLVTRIDVRIFLCFGSSVFSPSLVKLWGMILKRDP 278

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BLAST of Carg05897 vs. NCBI nr
Match: XP_022954554.1 (E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954569.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_023548844.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548852.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548861.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548868.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >KAG6602542.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 460.3 bits (1183), Expect = 1.2e-125
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV  F
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVMAF 223

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BLAST of Carg05897 vs. NCBI nr
Match: XP_022990150.1 (E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_022990152.1 E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_022990153.1 E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_022990154.1 E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima])

HSP 1 Score: 457.6 bits (1176), Expect = 7.6e-125
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDS+SLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSESLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKI+TKCCHHFHLGCIYEWMERSDNCPVCGKV  F
Sbjct: 181 LEEYTSENPKILTKCCHHFHLGCIYEWMERSDNCPVCGKVMAF 223

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BLAST of Carg05897 vs. NCBI nr
Match: XP_008459404.1 (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 2.0e-117
Identity = 206/223 (92.38%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACL+ESKENLGKSSLK PSTKST+G GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGK   F
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAF 223

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BLAST of Carg05897 vs. NCBI nr
Match: XP_038889911.1 (E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida])

HSP 1 Score: 431.4 bits (1108), Expect = 5.9e-117
Identity = 205/223 (91.93%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FL+AYTLIFRRGEVH VSSSIQG 
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLSAYTLIFRRGEVHSVSSSIQGT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           +VDTDSDSLGSAGKWNGSACL+ESKENLGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGKV  F
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAF 223

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BLAST of Carg05897 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.3e-71
Identity = 139/231 (60.17%), Postives = 163/231 (70.56%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  ++D ++Y+NPNSSVYRNC C+ C   NFLN Y  +FRRGE   + SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
            S++S+SS DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EVDTDSDSLGSAG-KW-NGSACL---DESKENLGKSSLKIPSTKSTT---GAGYAYTSSE 180
           + D DS+S G  G KW N  + L   D  +E   KSSL+I  ++S +    +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           DEDVCPTCLEEYTSENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV  F
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEF 227

[Close]

BLAST of Carg05897 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-14
Identity = 46/110 (41.82%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 124 TDSDSLGSAGKWNGSA------C--LDESKENLGKSSLKIPSTKS--TTGAGYAYTSSED 183
           TDS+S+   G+ +GS+      C  L ES      SS+ +   KS  +   G      E+
Sbjct: 78  TDSESI--KGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEE 137

Query: 184 EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           ED CP C E+Y  ENP++ TKC H FHL C+ EW+ERSD CP+C K  +F
Sbjct: 138 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVF 185

[Close]

BLAST of Carg05897 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-13
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 175 DVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGK 220
           D CP CLEEY  +NPK++TKC H FHL CI  WMERS+ CPVC K
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDK 146

[Close]

BLAST of Carg05897 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.9e-10
Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 147 NLGKSSLKIPSTKSTTGAGYAYTSSED-----EDVCPTCLEEYTSENPKIVTKCCHHFHL 206
           NL  +S   P+  S++ +  A   + D     +D C  CLE +T ++P  VT C H +HL
Sbjct: 11  NLSDNSPFNPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHL 70

Query: 207 GCIYEWMERSDNCPVCGKVCLFFSIISYELV-----------QSLSQSHPIS 243
            CI EW +RS  CP+C ++ +     S EL+           +++S S PIS
Sbjct: 71  QCIIEWSQRSKECPICWQLFVLRDPASQELLAAVEKERLLKTRNISSSSPIS 122

[Close]

BLAST of Carg05897 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.4e-09
Identity = 27/79 (34.18%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 161 TTGAGYAYTSSED--EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCG 220
           T+ A +     +D  +D C  CLE +   +P  +T C H +HL CI EW +RS  CP+C 
Sbjct: 15  TSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCW 74

Query: 221 KVCLFFSIISYELVQSLSQ 238
           +        S EL++++ Q
Sbjct: 75  QSISLKDPTSQELLEAVEQ 93

[Close]

BLAST of Carg05897 vs. ExPASy TrEMBL
Match: A0A6J1GR85 (E3 ubiquitin-protein ligase At3g02290 OS=Cucurbita moschata OX=3662 GN=LOC111456789 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 5.7e-126
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV  F
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVMAF 223

[Close]

BLAST of Carg05897 vs. ExPASy TrEMBL
Match: A0A6J1JPB8 (E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487128 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.7e-125
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDS+SLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSESLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKI+TKCCHHFHLGCIYEWMERSDNCPVCGKV  F
Sbjct: 181 LEEYTSENPKILTKCCHHFHLGCIYEWMERSDNCPVCGKVMAF 223

[Close]

BLAST of Carg05897 vs. ExPASy TrEMBL
Match: A0A1S3CA28 (E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 9.8e-118
Identity = 206/223 (92.38%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACL+ESKENLGKSSLK PSTKST+G GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGK   F
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAF 223

[Close]

BLAST of Carg05897 vs. ExPASy TrEMBL
Match: A0A0A0KSH8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.2e-115
Identity = 204/223 (91.48%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGS GK NGSACL+ESKENLGKSSLK PSTKST+G GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGK   F
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAF 223

[Close]

BLAST of Carg05897 vs. ExPASy TrEMBL
Match: A0A6J1BYQ7 (E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC111006466 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.6e-115
Identity = 201/223 (90.13%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++D+EDYVNPNSS+YRNCTCLSCFIQNFLNAYTLIFRRGEVH VSSSIQG 
Sbjct: 1   MGAVCCCLSVEDYEDYVNPNSSLYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVD DSDSL + GKWNGSACLDESKENLGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 EVDADSDSLDTPGKWNGSACLDESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           LEEYTSENPKI+T+C HHFHLGCIYEWMERSDNCPVCGKV  F
Sbjct: 181 LEEYTSENPKIMTQCSHHFHLGCIYEWMERSDNCPVCGKVMAF 223

[Close]

BLAST of Carg05897 vs. TAIR 10
Match: AT3G02290.1 (RING/U-box superfamily protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.6e-72
Identity = 139/231 (60.17%), Postives = 163/231 (70.56%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  ++D ++Y+NPNSSVYRNC C+ C   NFLN Y  +FRRGE   + SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
            S++S+SS DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EVDTDSDSLGSAG-KW-NGSACL---DESKENLGKSSLKIPSTKSTT---GAGYAYTSSE 180
           + D DS+S G  G KW N  + L   D  +E   KSSL+I  ++S +    +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           DEDVCPTCLEEYTSENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV  F
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEF 227

[Close]

BLAST of Carg05897 vs. TAIR 10
Match: AT5G15790.1 (RING/U-box superfamily protein )

HSP 1 Score: 266.2 bits (679), Expect = 3.0e-71
Identity = 137/230 (59.57%), Postives = 164/230 (71.30%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  +DDFEDY NP+SSV R+C C  C + NFLN Y  +FRRGE   + SS+Q A
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQ-A 60

Query: 61  TSMSSASST--DNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPL 120
           T++S A+ST  DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPL
Sbjct: 61  TNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPL 120

Query: 121 RGEVDTDSDSLGSAG-KWNGSACL--DESKENLGKSSLKI--PSTKSTTGAGYAYTSSED 180
           R + D DS+S    G KW     +  ++SKE   +SS +I    T ST+  G  Y +S+D
Sbjct: 121 RSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEG-LYITSDD 180

Query: 181 EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           EDVCPTCLEEY SENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV  F
Sbjct: 181 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEF 228

[Close]

BLAST of Carg05897 vs. TAIR 10
Match: AT5G15790.2 (RING/U-box superfamily protein )

HSP 1 Score: 266.2 bits (679), Expect = 3.0e-71
Identity = 137/230 (59.57%), Postives = 164/230 (71.30%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  +DDFEDY NP+SSV R+C C  C + NFLN Y  +FRRGE   + SS+Q A
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQ-A 60

Query: 61  TSMSSASST--DNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPL 120
           T++S A+ST  DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPL
Sbjct: 61  TNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPL 120

Query: 121 RGEVDTDSDSLGSAG-KWNGSACL--DESKENLGKSSLKI--PSTKSTTGAGYAYTSSED 180
           R + D DS+S    G KW     +  ++SKE   +SS +I    T ST+  G  Y +S+D
Sbjct: 121 RSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEG-LYITSDD 180

Query: 181 EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           EDVCPTCLEEY SENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV  F
Sbjct: 181 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEF 228

[Close]

BLAST of Carg05897 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 263.5 bits (672), Expect = 2.0e-70
Identity = 124/224 (55.36%), Postives = 156/224 (69.64%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGA CCC  +D FE YVNPN+S+ RNC CL+CF+Q+F++ Y  +F RG +HP+ S+++ A
Sbjct: 1   MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           T M+S ++ D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESEPLRG
Sbjct: 61  TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 120

Query: 121 EVDTDSDSLGSAG-KWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPT 180
           + +  S++LG  G KW+ S   D SKE   K S     +K+  G    Y  S+DED+CPT
Sbjct: 121 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 180

Query: 181 CLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           CL++YT ENPKI+TKC HHFHL CIYEWMERS+ CPVCGKV  F
Sbjct: 181 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 215

[Close]

BLAST of Carg05897 vs. TAIR 10
Match: AT5G38895.3 (RING/U-box superfamily protein )

HSP 1 Score: 263.5 bits (672), Expect = 2.0e-70
Identity = 124/224 (55.36%), Postives = 156/224 (69.64%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGA CCC  +D FE YVNPN+S+ RNC CL+CF+Q+F++ Y  +F RG +HP+ S+++ A
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           T M+S ++ D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESEPLRG
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 225

Query: 121 EVDTDSDSLGSAG-KWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPT 180
           + +  S++LG  G KW+ S   D SKE   K S     +K+  G    Y  S+DED+CPT
Sbjct: 226 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 285

Query: 181 CLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLF 224
           CL++YT ENPKI+TKC HHFHL CIYEWMERS+ CPVCGKV  F
Sbjct: 286 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 320

The following BLAST results are available for this feature:

BLAST of Carg05897 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033220.1	5.6e-160	100.00	E3 ubiquitin-protein ligase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954554.1	1.2e-125	99.10	E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ub...	[more]
XP_022990150.1	7.6e-125	98.21	E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_02299015...	[more]
XP_008459404.1	2.0e-117	92.38	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo]	[more]
XP_038889911.1	5.9e-117	91.93	E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida]	[more]

BLAST of Carg05897 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LE94	2.3e-71	60.17	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q2HIJ8	3.3e-14	41.82	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q93ZF6	3.7e-13	66.67	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]
Q4TU14	2.9e-10	33.04	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q9ZT42	9.4e-09	34.18	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]

BLAST of Carg05897 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR85	5.7e-126	99.10	E3 ubiquitin-protein ligase At3g02290 OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A6J1JPB8	3.7e-125	98.21	E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3CA28	9.8e-118	92.38	E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE...	[more]
A0A0A0KSH8	1.2e-115	91.48	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 P...	[more]
A0A6J1BYQ7	1.6e-115	90.13	E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of Carg05897 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02290.1	1.6e-72	60.17	RING/U-box superfamily protein	[more]
AT5G15790.1	3.0e-71	59.57	RING/U-box superfamily protein	[more]
AT5G15790.2	3.0e-71	59.57	RING/U-box superfamily protein	[more]
AT5G38895.1	2.0e-70	55.36	RING/U-box superfamily protein	[more]
AT5G38895.3	2.0e-70	55.36	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..217 e-value: 1.3E-5 score: 34.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..217 e-value: 2.2E-10 score: 40.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..217 score: 11.677863
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 152..221 e-value: 9.1E-14 score: 52.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..89
None	No IPR available	PANTHER	PTHR46463:SF43	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 1..223
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 1..223
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 172..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05897-RA	Carg05897-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding