Carg05896 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg05896
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRegulator of chromosome condensation (RCC1) family protein
LocationCarg_Chr04: 20982609 .. 20985030 (-)
RNA-Seq ExpressionCarg05896
SyntenyCarg05896
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCATTTCAAACTTTCTTCTCTGATCCTTTTCCTCAGGTACTCTCCGCTTTCCCTCTAATCATCTCTCTCTTTAAATTCTCACATATTTTTACTGTCTGAATCATATCATACGGCTGACGACAACTCAGGAAAAGGTCCGCCCTTTTCGTGAGTAGTTTCGATTTTCCTTTTTTTTTTTTTTTTTGTCGTCGGTCCATCGATTGGAATGAGGCTTGAGAAATTAGAACGAATAATGCGGTGGTCTTCATTTTTTCTTTTCTGCATGATATCTTTCATTTCCAATTTCTGTTTGATTTCTTCTTTGGAGCTGAACTATTTGTTGTCCATGGAATTTTTCGAATCTTTTAGGGGCAAGAAATGGATATTAACGATGTGTTTGGGATGACCCAGAATAGTAGCCTGCCAAGAAAGAGTGCAATTTATGTTTGGGGTTATAATCAATCGGGCCAGACGGGTCGAAAGGGGAAGGATCATCAATTAAGGATTCCTAGGCAGCTCCGTCCTGACCTTTTTGGATGCCCAGTGGAAGCTAATTGTCGATGGCTGGATATTGATTGTGGTCGTGAACATACGGCTGCTGTGGCTTCTGATGGGTCACTTTTTACCTGGGGTTTGACCTATTCCTACTCTCTGTTTCTGTTCATAAAATGTTTCTGATGACCCGAGATTTCGTTTCTTTTGATATGTTTATAAGCAAGTTTATTCTTTCGTTTAAAGCTCTTGGAACTACAGGCTTCTTTCTCCAATCTTTTGGGTTTTATTCCAAATTTCCGGACCATTCGGAAAATTGAAATAATAACATATGGACAATGACAATAATTTTAGCAGATATCAATGAGAGTTTGATTATTTGTGGTACCCTGTGACTCATCTGGCGTTACCCAAAAGTTTCAGATCAATGAATTCTAGCAATATTAAATGGGAACGATGTTGTATTTGTGTATTGGTTTCCATGGGCGGCCATCTGGCTCCTCTTTGTCTGCTTGAACCTTTTATTTGCAGAATTTTTCTGTTTTTCTTTTCCCCTGCAGTGCACGTGAAGGTGCTCGGTTTTGATATAGGATTTTTTTTTCATTTTCAAATAATAACTATCAGGTGCAAATGATTTTGGTCAACTGGGGGATGGAACTGAGGAAAAGAGCAAAGAGCCAAAGAAAGTGAAGCAATTGCAGACGGAGTTTGTGAAATCTGTTTCCTGTGGAGCACATTGTACTGCTGCTATTGCAGAACCTCGCGAGAATGATGGCACGATTTCAACTAGTAGACTCTGGATTTGGGGACAAAATCAGGTTTTAGTTTACTTGTTTTAAATATTGATGTTCTTTTGTGAACTTTTCTGCATTTTCAACAACTCCTCTCTTATCACAGGGATCCAATTTGCCACGCTTATTTTGGGGAGCCTTCACACCAAACACGGTATGTTTCTAATATTTAGTAAGCAAATATCATGTGTCTATCGTGTATATATTTAAGTTTTTTAAAAATCTCAGTATTTTGTCAGTTTCTTTTTCACTTTTTCTTTTCTCTTTTATTTTATTGTTCCAATAACGAGCCTAGTTCATGTACGTAATCTGTCCTCTCATTTATTGTCTACCATTCTTGCATTTTCCTCTCTATGGGAGAAACATCCATCATTTTAATCACTTTGGGAAGACCTTACCTTATTTTCTCCTTAAATTTTCACACTATTCTAATAACCTTGGCTTCAACTAATTCAATGTAATAACTGTTTTGTTATTTTGGTTCTCCTCTATTTTGAAGTTCCTCTAAGATTCGACAGTGTCGTGATAATATAGAATTATCTTCAGCTGATACAGAATTTAGTGTTGAATCAACATGGTATAGAGTTATTAGATAATAAAATGAGAGCGATAGTCAATTACCACTTTGCAGTTAATATTCCTTAAAACAATTACCTAAGGACATTCTCTTTGCTGTAGATTATTCGTCAAGTGTCCTGTGGGGCAGTTCATGTAGTGGCATTATCGGACGATGGGCAAATGCAAGCATGGGGTGAGTTCATCTGGATTTCATTAAAGTTGACCTTTTAAAGTTTAAGAAATTTTTTAGTGAAGTTGATTTCTACTTGTATACATTTAGTGGTGCTATTGTATATTGGGAATCTACCCGTAGTGAGTTGGAAGCAGGAGAGAACCTTGAATATTGGGAATCTATCCTTAGTGAGTTTTTATCTAGTTTCCTGCCACCTCAATAATAATACAATCCCTATTCTGGTTGACCAGGCTACAATGAGTATGGTCAGCTAGGCAGGGGTGTTACATCCGAAGGTCTACAAGGAGCTCGCATTATAAGTGCTTATGCAAAGTTCCTTGATGAGGCCCCTGAGCTTGTAAAGATTACTAAAGTGTCATGTGGGGAGTACCATTCTGCAGCTATATCTGAAAACGGCGAGGTGTAA

mRNA sequence

TTTCCATTTCAAACTTTCTTCTCTGATCCTTTTCCTCAGGGGCAAGAAATGGATATTAACGATGTGTTTGGGATGACCCAGAATAGTAGCCTGCCAAGAAAGAGTGCAATTTATGTTTGGGGTTATAATCAATCGGGCCAGACGGGTCGAAAGGGGAAGGATCATCAATTAAGGATTCCTAGGCAGCTCCGTCCTGACCTTTTTGGATGCCCAGTGGAAGCTAATTGTCGATGGCTGGATATTGATTGTGGTCGTGAACATACGGCTGCTGTGGCTTCTGATGGGTCACTTTTTACCTGGGGTGCAAATGATTTTGGTCAACTGGGGGATGGAACTGAGGAAAAGAGCAAAGAGCCAAAGAAAGTGAAGCAATTGCAGACGGAGTTTGTGAAATCTGTTTCCTGTGGAGCACATTGTACTGCTGCTATTGCAGAACCTCGCGAGAATGATGGCACGATTTCAACTAGTAGACTCTGGATTTGGGGACAAAATCAGGGATCCAATTTGCCACGCTTATTTTGGGGAGCCTTCACACCAAACACGATTATTCGTCAAGTGTCCTGTGGGGCAGTTCATGTAGTGGCATTATCGGACGATGGGCAAATGCAAGCATGGGGCTACAATGAGTATGGTCAGCTAGGCAGGGGTGTTACATCCGAAGGTCTACAAGGAGCTCGCATTATAAGTGCTTATGCAAAGTTCCTTGATGAGGCCCCTGAGCTTGTAAAGATTACTAAAGTGTCATGTGGGGAGTACCATTCTGCAGCTATATCTGAAAACGGCGAGGTGTAA

Coding sequence (CDS)

TTTCCATTTCAAACTTTCTTCTCTGATCCTTTTCCTCAGGGGCAAGAAATGGATATTAACGATGTGTTTGGGATGACCCAGAATAGTAGCCTGCCAAGAAAGAGTGCAATTTATGTTTGGGGTTATAATCAATCGGGCCAGACGGGTCGAAAGGGGAAGGATCATCAATTAAGGATTCCTAGGCAGCTCCGTCCTGACCTTTTTGGATGCCCAGTGGAAGCTAATTGTCGATGGCTGGATATTGATTGTGGTCGTGAACATACGGCTGCTGTGGCTTCTGATGGGTCACTTTTTACCTGGGGTGCAAATGATTTTGGTCAACTGGGGGATGGAACTGAGGAAAAGAGCAAAGAGCCAAAGAAAGTGAAGCAATTGCAGACGGAGTTTGTGAAATCTGTTTCCTGTGGAGCACATTGTACTGCTGCTATTGCAGAACCTCGCGAGAATGATGGCACGATTTCAACTAGTAGACTCTGGATTTGGGGACAAAATCAGGGATCCAATTTGCCACGCTTATTTTGGGGAGCCTTCACACCAAACACGATTATTCGTCAAGTGTCCTGTGGGGCAGTTCATGTAGTGGCATTATCGGACGATGGGCAAATGCAAGCATGGGGCTACAATGAGTATGGTCAGCTAGGCAGGGGTGTTACATCCGAAGGTCTACAAGGAGCTCGCATTATAAGTGCTTATGCAAAGTTCCTTGATGAGGCCCCTGAGCTTGTAAAGATTACTAAAGTGTCATGTGGGGAGTACCATTCTGCAGCTATATCTGAAAACGGCGAGGTGTAA

Protein sequence

FPFQTFFSDPFPQGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAAISENGEV
Homology
[Close]
BLAST of Carg05896 vs. NCBI nr
Match: KAG6602541.1 (Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 553.9 bits (1426), Expect = 7.4e-154
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   FPFQTFFSDPFPQGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIP 60
           FPFQTFFSDPFPQGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIP
Sbjct: 72  FPFQTFFSDPFPQGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIP 131

Query: 61  RQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPK 120
           RQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPK
Sbjct: 132 RQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPK 191

Query: 121 KVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPN 180
           KVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPN
Sbjct: 192 KVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPN 251

Query: 181 TIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPE 240
           TIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPE
Sbjct: 252 TIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPE 311

Query: 241 LVKITKVSCGEYHSAAISENGEV 264
           LVKITKVSCGEYHSAAISENGEV
Sbjct: 312 LVKITKVSCGEYHSAAISENGEV 334

[Close]
BLAST of Carg05896 vs. NCBI nr
Match: KAG7033219.1 (RCC1 and BTB domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553.9 bits (1426), Expect = 7.4e-154
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   FPFQTFFSDPFPQGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIP 60
           FPFQTFFSDPFPQGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIP
Sbjct: 1   FPFQTFFSDPFPQGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIP 60

Query: 61  RQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPK 120
           RQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPK
Sbjct: 61  RQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPK 120

Query: 121 KVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPN 180
           KVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPN
Sbjct: 121 KVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPN 180

Query: 181 TIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPE 240
           TIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPE
Sbjct: 181 TIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPE 240

Query: 241 LVKITKVSCGEYHSAAISENGEV 264
           LVKITKVSCGEYHSAAISENGEV
Sbjct: 241 LVKITKVSCGEYHSAAISENGEV 263

[Close]
BLAST of Carg05896 vs. NCBI nr
Match: XP_023554245.1 (ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023554254.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023554263.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023554270.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 519.2 bits (1336), Expect = 2.0e-143
Identity = 246/247 (99.60%), Postives = 247/247 (100.00%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLR+PRQLRPDLFGCPVEANC
Sbjct: 1   MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLRPDLFGCPVEANC 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG
Sbjct: 61  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL
Sbjct: 121 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA
Sbjct: 181 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. NCBI nr
Match: XP_022954542.1 (ultraviolet-B receptor UVR8 [Cucurbita moschata])

HSP 1 Score: 515.8 bits (1327), Expect = 2.2e-142
Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDINDVFGMTQN SLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC
Sbjct: 1   MDINDVFGMTQNCSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG
Sbjct: 61  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           AHCTAAIAEP ENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL
Sbjct: 121 AHCTAAIAEPHENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA
Sbjct: 181 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. NCBI nr
Match: XP_022990753.1 (ultraviolet-B receptor UVR8 [Cucurbita maxima])

HSP 1 Score: 514.2 bits (1323), Expect = 6.5e-142
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLR+PRQLRPDLFGCPVEANC
Sbjct: 1   MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLRPDLFGCPVEANC 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQ EFVKSVSCG
Sbjct: 61  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQMEFVKSVSCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           AHCTAAIAEPR NDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL
Sbjct: 121 AHCTAAIAEPRVNDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA
Sbjct: 181 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. ExPASy Swiss-Prot
Match: Q6P798 (RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.7e-24
Identity = 70/237 (29.54%), Postives = 114/237 (48.10%), Query Frame = 0 

Query: 37  IYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGS 96
           ++ WG+N   Q G    +H L +P  +  +L      +N + +++ CG  H+  + SDG 
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGL-VPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 179

Query: 97  LFTWGANDFGQLGDGTEEKSKEPKKVKQ-LQTEFVKSVSCGAHCTAAIAEPRENDGTIST 156
           +F WG N+ GQ+G G+      P++V   LQ + V S++CG  C+ A+         + T
Sbjct: 180 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAV---------VDT 239

Query: 157 SRLWIWGQN--------QGSNLPRLFWGAFTPNTIIRQVSCGAVHVVALSDDGQMQAWGY 216
             +++WG N           N P     A      +++V+CG  H + L+D+GQ+ AWG 
Sbjct: 240 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 299

Query: 217 NEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYH-SAAISENGEV 264
           N YGQLG G  S       ++        E   +++I   +C   H SAA S+ G V
Sbjct: 300 NSYGQLGTGNKSNQSYPTPVVV-------EKDRIIEI--AACHSAHTSAAKSQGGHV 331

[Close]
BLAST of Carg05896 vs. ExPASy Swiss-Prot
Match: Q99LJ7 (RCC1 and BTB domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rcbtb2 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-23
Identity = 65/234 (27.78%), Postives = 111/234 (47.44%), Query Frame = 0 

Query: 37  IYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGS 96
           ++ WG+N   Q G    +H L +P  +  +L      +N + +++ CG  H+  + SDG 
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGL-VPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 179

Query: 97  LFTWGANDFGQLGDGTEEKSKEPKKVKQ-LQTEFVKSVSCGAHCTAAIAEPRENDGTIST 156
           +F WG N+ GQ+G G+      P++V   LQ + V +++CG  C+ A+         + T
Sbjct: 180 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAV---------VDT 239

Query: 157 SRLWIWGQN--------QGSNLPRLFWGAFTPNTIIRQVSCGAVHVVALSDDGQMQAWGY 216
             +++WG N           N P     A      +++V+CG  H + L+D+GQ+ AWG 
Sbjct: 240 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 299

Query: 217 NEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAAISENG 262
           N YGQLG G  S       ++        E   +++I   +C   H++A    G
Sbjct: 300 NSYGQLGTGNKSNQSYPTPVVV-------EKDRIIEI--AACHSAHTSAAKTQG 328

[Close]
BLAST of Carg05896 vs. ExPASy Swiss-Prot
Match: O95199 (RCC1 and BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RCBTB2 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 58/189 (30.69%), Postives = 95/189 (50.26%), Query Frame = 0 

Query: 37  IYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGS 96
           ++ WG+N   Q G    +H L +P  +  +L      +N + +++ CG  H+  + SDG 
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGL-VPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 179

Query: 97  LFTWGANDFGQLGDGTEEKSKEPKKVKQ-LQTEFVKSVSCGAHCTAAIAEPRENDGTIST 156
           +F WG N+ GQ+G G+      P++V   LQ + V +++CG  C  A+         + T
Sbjct: 180 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 239

Query: 157 SRLWIWGQN--------QGSNLPRLFWGAFTPNTIIRQVSCGAVHVVALSDDGQMQAWGY 216
             +++WG N           N P     A      +++V+CG  H + L+D+GQ+ AWG 
Sbjct: 240 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 292

[Close]
BLAST of Carg05896 vs. ExPASy Swiss-Prot
Match: Q5RCZ7 (RCC1 and BTB domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RCBTB2 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 58/189 (30.69%), Postives = 95/189 (50.26%), Query Frame = 0 

Query: 37  IYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGS 96
           ++ WG+N   Q G    +H L +P  +  +L      +N + +++ CG  H+  + SDG 
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGL-VPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 179

Query: 97  LFTWGANDFGQLGDGTEEKSKEPKKVKQ-LQTEFVKSVSCGAHCTAAIAEPRENDGTIST 156
           +F WG N+ GQ+G G+      P++V   LQ + V +++CG  C  A+         + T
Sbjct: 180 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 239

Query: 157 SRLWIWGQN--------QGSNLPRLFWGAFTPNTIIRQVSCGAVHVVALSDDGQMQAWGY 216
             +++WG N           N P     A      +++V+CG  H + L+D+GQ+ AWG 
Sbjct: 240 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 292

[Close]
BLAST of Carg05896 vs. ExPASy Swiss-Prot
Match: Q6NXM2 (RCC1 and BTB domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rcbtb1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.1e-22
Identity = 68/226 (30.09%), Postives = 108/226 (47.79%), Query Frame = 0 

Query: 37  IYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGS 96
           +Y WG+N   Q G  G  +Q   P Q+  +L    V      +++ CG  H+ A+A+DG 
Sbjct: 96  VYAWGHNGYSQLG-NGTTNQGIAPVQVCTNLLIKQV------IEVACGSHHSMALAADGE 155

Query: 97  LFTWGANDFGQLGDGTEEKSKEPKKVKQ-LQTEFVKSVSCGAHCTAAIAEPRENDGTIST 156
           LF WG N+ GQ+G G+      P+KV   L T+ V +++CG   + A+ +  E  G    
Sbjct: 156 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYN 215

Query: 157 SRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGR 216
               +   N G+ L  +   A      + Q+ CG  H +AL+D+G + AWG N YGQLG 
Sbjct: 216 GNGQLGLGNNGNQLTPVRVAAL-HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 275

Query: 217 GVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAAISENG 262
           G  +  L   +I+    + ++ A         +C   H++A    G
Sbjct: 276 GSKNNLLSPTQIMVEKERVIEIA---------ACHSTHTSAAKTQG 304

[Close]
BLAST of Carg05896 vs. ExPASy TrEMBL
Match: A0A6J1GR87 (ultraviolet-B receptor UVR8 OS=Cucurbita moschata OX=3662 GN=LOC111456778 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.1e-142
Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDINDVFGMTQN SLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC
Sbjct: 1   MDINDVFGMTQNCSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG
Sbjct: 61  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           AHCTAAIAEP ENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL
Sbjct: 121 AHCTAAIAEPHENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA
Sbjct: 181 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. ExPASy TrEMBL
Match: A0A6J1JU72 (ultraviolet-B receptor UVR8 OS=Cucurbita maxima OX=3661 GN=LOC111487541 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLR+PRQLRPDLFGCPVEANC
Sbjct: 1   MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLRPDLFGCPVEANC 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQ EFVKSVSCG
Sbjct: 61  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQMEFVKSVSCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           AHCTAAIAEPR NDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL
Sbjct: 121 AHCTAAIAEPRVNDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA
Sbjct: 181 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. ExPASy TrEMBL
Match: A0A6J1DRJ2 (ultraviolet-B receptor UVR8 OS=Momordica charantia OX=3673 GN=LOC111022887 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.0e-133
Identity = 227/247 (91.90%), Postives = 237/247 (95.95%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDI+++ G TQN SLPRKSAIYVWGYNQSGQTGRKG+DHQLR+PRQL PDLFGCP  AN 
Sbjct: 1   MDIDEILGTTQNVSLPRKSAIYVWGYNQSGQTGRKGEDHQLRVPRQLHPDLFGCPAGANS 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDI CGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSK PKKVKQLQTEFVKS+SCG
Sbjct: 61  RWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKHPKKVKQLQTEFVKSISCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           AHCTAAIAEPRENDGTIS+SRLW+WGQNQGSNLPRLFWGAFTP TIIRQVSCGAVHVVAL
Sbjct: 121 AHCTAAIAEPRENDGTISSSRLWVWGQNQGSNLPRLFWGAFTPKTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDG++QAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA
Sbjct: 181 SDDGELQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. ExPASy TrEMBL
Match: A0A0A0KUH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641620 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132
Identity = 227/247 (91.90%), Postives = 234/247 (94.74%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDI+D+FGMTQN SLPRKSAIYVWGYNQSGQTGRKGKDHQLR+PRQL PDLFGCP E N 
Sbjct: 1   MDIDDIFGMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINS 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDI CGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSK PKKV QLQ EFVKSVSCG
Sbjct: 61  RWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVSCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           AHCTAAIAEPRENDGT+ST RLWIWGQNQGSN PRLFWGAFTP TIIRQVSCGAVHVVAL
Sbjct: 121 AHCTAAIAEPRENDGTLSTCRLWIWGQNQGSNFPRLFWGAFTPQTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDGQ+QAWGYNEYGQLGRGVTSEGLQGARII+A+AKFLDEAPELV ITKVSCGEYHSAA
Sbjct: 181 SDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. ExPASy TrEMBL
Match: A0A5A7T7G9 (Ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002290 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 227/247 (91.90%), Postives = 234/247 (94.74%), Query Frame = 0 

Query: 17  MDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANC 76
           MDI+D+FGMTQN SLPRKSAIYVWGYNQSGQTGRKGKDHQLR+PRQL PDLFGCP E N 
Sbjct: 1   MDIDDIFGMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINS 60

Query: 77  RWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG 136
           RWLDI CGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSK PKKV QLQ EFVKSVSCG
Sbjct: 61  RWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVSCG 120

Query: 137 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVAL 196
           A CTAAIA PRENDGT+STSRLWIWGQNQGSN PRLFWGAFTP TIIRQVSCGAVHVVAL
Sbjct: 121 ARCTAAIAAPRENDGTLSTSRLWIWGQNQGSNSPRLFWGAFTPQTIIRQVSCGAVHVVAL 180

Query: 197 SDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAA 256
           SDDGQ+QAWGYNEYGQLGRGVTSEGLQGARII+AYAKFLDEAPELVKITK+SCGEYHSAA
Sbjct: 181 SDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAYAKFLDEAPELVKITKMSCGEYHSAA 240

Query: 257 ISENGEV 264
           ISENGEV
Sbjct: 241 ISENGEV 247

[Close]
BLAST of Carg05896 vs. TAIR 10
Match: AT3G02300.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 396.0 bits (1016), Expect = 2.4e-110
Identity = 187/248 (75.40%), Postives = 211/248 (85.08%), Query Frame = 0 

Query: 17  MDINDVFG-MTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEAN 76
           MDI ++ G +  + S+P KSAIYVWGYNQSGQTGR  ++  LRIP+QL P+LFGCP  AN
Sbjct: 1   MDIGEIIGEVAPSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGAN 60

Query: 77  CRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSC 136
            RWLDI CGREHTAAVASDGSLF WGAN++GQLGDGTE   K PKKVKQLQ+EFVK VSC
Sbjct: 61  SRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSC 120

Query: 137 GAHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVA 196
           GA CTAAIAEPRENDGT+STSRLW+WGQNQGSNLPRLF GAF   T IRQVSCG  HVVA
Sbjct: 121 GAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVA 180

Query: 197 LSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSA 256
           LS++G +QAWGYNE GQLGRGVT EGLQ  R+I+AYAKFLDEAPELVKI ++SCGEYH+A
Sbjct: 181 LSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTA 240

Query: 257 AISENGEV 264
           A+S+ GEV
Sbjct: 241 ALSDAGEV 248

[Close]
BLAST of Carg05896 vs. TAIR 10
Match: AT5G60870.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-20
Identity = 77/255 (30.20%), Postives = 118/255 (46.27%), Query Frame = 0 

Query: 24  GMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDC 83
           G   + +L  +  ++ WGY   G  G K    +L +PR++  D + C + A      I  
Sbjct: 160 GGLHSVALTHQGDVFTWGYGGFGALGHKVYTREL-VPRRV-DDSWDCKISA------IAT 219

Query: 84  GREHTAAVASDGSLFTWGAND-FGQLGDGTEEKSKE------PKKVKQLQTEFVKSVSCG 143
              HTAA+   G L+ WG  +  G+LG G      E      P KVK L T  V SVSCG
Sbjct: 220 SGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKAL-TVPVASVSCG 279

Query: 144 AHCTAAIAEPRENDGTISTSRLWIWGQNQGSNLPR-LFWGAFTPNTI-------IRQVSC 203
              T A+ +           +LW WG N    L R    G + P  +       I Q++C
Sbjct: 280 GFFTMALTK---------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIAC 339

Query: 204 GAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVS 263
           G  H +AL+++G++ +WG+  +GQLG    S  L+  ++ +      D+     KI  ++
Sbjct: 340 GGYHSLALTEEGKVLSWGHGGHGQLG----SSSLRNQKVPTEIEALADK-----KIVFIA 387

[Close]
BLAST of Carg05896 vs. TAIR 10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 95.9 bits (237), Expect = 5.2e-20
Identity = 70/248 (28.23%), Postives = 111/248 (44.76%), Query Frame = 0 

Query: 24  GMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDC 83
           G + + +L     +  WG  + GQ G  G       P QL   L G  +      + + C
Sbjct: 23  GASHSVALLSGDIVCSWGRGEDGQLGH-GDAEDRPSPTQLSA-LDGHQI------VSVTC 82

Query: 84  GREHTAAVASDG-SLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCG-AHCTA 143
           G +HT A +  G  +++WG  DFG+LG G       P  +K L    +K ++CG +HC A
Sbjct: 83  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 142

Query: 144 AIAEPRENDGTISTSRLWIWGQNQGSNLP-RLFWGAFTPNTI-------IRQVSCGAVHV 203
              E     G + +     WG+NQ   L       +  P  I       I+ V+ GA H 
Sbjct: 143 VTME-----GEVQS-----WGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 202

Query: 204 VALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYH 262
            A+++DG +  WG+  YG LG G  ++ L   R+ S   +         K++ V+CG  H
Sbjct: 203 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE---------KMSMVACGWRH 243

[Close]
BLAST of Carg05896 vs. TAIR 10
Match: AT4G14368.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 92.0 bits (227), Expect = 7.4e-19
Identity = 69/238 (28.99%), Postives = 103/238 (43.28%), Query Frame = 0 

Query: 37  IYVW--GYNQSGQTGRKGKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASD 96
           ++ W  G +  G  G  G D    IP+++   + G  V      L + CG  H+A   ++
Sbjct: 343 LFTWGDGIHNVGLLGH-GSDLSHWIPKRVSGPVEGLQV------LSVACGTWHSALATAN 402

Query: 97  GSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQTEFVKSVSCGAHCTAAIAEPRENDGTIS 156
           G LFT+G   FG LG G  E    PK+VK L       V+CG   T AI E     GT +
Sbjct: 403 GKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTST 462

Query: 157 TSR-LWIWGQNQGSNLPRLFWGAFTPNTII--------RQVSCGAVHVVALSDDGQMQAW 216
           +SR L+ WG    + L       +   T +         Q++CG    VAL+  G +   
Sbjct: 463 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTM 522

Query: 217 GYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAAISENGEV 264
           G   +GQLG   +   L          +F++E         +SCG++H A ++   EV
Sbjct: 523 GGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEE---------ISCGDHHVAVLTSRSEV 564

[Close]
BLAST of Carg05896 vs. TAIR 10
Match: AT1G69710.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 91.7 bits (226), Expect = 9.7e-19
Identity = 67/224 (29.91%), Postives = 100/224 (44.64%), Query Frame = 0 

Query: 52  GKDHQLRIPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDG 111
           G +    IP+++  DL G  V       D+ CG  HTA VAS G LFT+G   FG LG G
Sbjct: 389 GNESSCWIPKRVTGDLQGLYVS------DVACGPWHTAVVASSGQLFTFGDGTFGALGHG 448

Query: 112 TEEKSKEPKKVKQLQTEFVKSVSCGAHCTAAIA----EPRENDGTISTSRLWIWGQNQ-- 171
               +  P++V+ L    V  V+CG   TAA+     E  E +   S  +++ WG  +  
Sbjct: 449 DRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKG 508

Query: 172 ----GSNLPRLFWGAF--TPNTIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTS 231
               G N  +L         N  I QV+CG    V+ +  G +   G   YGQLG   T+
Sbjct: 509 QLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTA 568

Query: 232 EGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAAISENGEV 264
           +G    R+     +          + +++CG YH A ++   E+
Sbjct: 569 KGNFPERVEGDIVE--------ASVEEIACGSYHVAVLTSKSEI 597

The following BLAST results are available for this feature:
BLAST of Carg05896 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602541.17.4e-154100.00Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7033219.17.4e-154100.00RCC1 and BTB domain-containing protein 2, partial [Cucurbita argyrosperma subsp.... [more]
XP_023554245.12.0e-14399.60ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023554254.1 ultravi... [more]
XP_022954542.12.2e-14299.19ultraviolet-B receptor UVR8 [Cucurbita moschata][more]
XP_022990753.16.5e-14298.79ultraviolet-B receptor UVR8 [Cucurbita maxima][more]
BLAST of Carg05896 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6P7985.7e-2429.54RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Rcbtb2... [more]
Q99LJ72.8e-2327.78RCC1 and BTB domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rcbtb2 PE=1... [more]
O951991.4e-2230.69RCC1 and BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RCBTB2 PE=1 ... [more]
Q5RCZ71.4e-2230.69RCC1 and BTB domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RCBTB2 PE=2 ... [more]
Q6NXM29.1e-2230.09RCC1 and BTB domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rcbtb1 PE=1... [more]
BLAST of Carg05896 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GR871.1e-14299.19ultraviolet-B receptor UVR8 OS=Cucurbita moschata OX=3662 GN=LOC111456778 PE=4 S... [more]
A0A6J1JU723.2e-14298.79ultraviolet-B receptor UVR8 OS=Cucurbita maxima OX=3661 GN=LOC111487541 PE=4 SV=... [more]
A0A6J1DRJ22.0e-13391.90ultraviolet-B receptor UVR8 OS=Momordica charantia OX=3673 GN=LOC111022887 PE=4 ... [more]
A0A0A0KUH73.9e-13291.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641620 PE=4 SV=1[more]
A0A5A7T7G91.1e-13191.90Ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
BLAST of Carg05896 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G02300.12.4e-11075.40Regulator of chromosome condensation (RCC1) family protein [more]
AT5G60870.11.0e-2030.20Regulator of chromosome condensation (RCC1) family protein [more]
AT5G63860.15.2e-2028.23Regulator of chromosome condensation (RCC1) family protein [more]
AT4G14368.17.4e-1928.99Regulator of chromosome condensation (RCC1) family protein [more]
AT1G69710.19.7e-1929.91Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 36..52
score: 24.51
coord: 202..216
score: 45.56
coord: 97..113
score: 44.12
coord: 186..202
score: 34.31
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 37..91
e-value: 7.6E-7
score: 29.6
coord: 199..257
e-value: 1.5E-8
score: 35.1
coord: 94..143
e-value: 1.5E-14
score: 54.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 247..257
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 95..146
score: 15.770299
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 35..94
score: 10.966399
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 200..260
score: 13.780399
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 13..171
e-value: 3.3E-33
score: 117.1
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 174..263
e-value: 2.5E-19
score: 71.5
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 31..263
NoneNo IPR availablePANTHERPTHR45622UBIQUITIN-PROTEIN LIGASE E3A-RELATEDcoord: 25..263
NoneNo IPR availablePANTHERPTHR45622:SF14REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEINcoord: 25..263

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05896-RACarg05896-RAmRNA