Carg05894 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05894
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB59-like
Location	Carg_Chr04: 20979848 .. 20980833 (+)
RNA-Seq Expression	Carg05894
Synteny	Carg05894

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCAGAAGAAAAAGAATGGAGGAAGGGACCATGGACTCCCGAGGAAGACAAGTTGTTGTCTGAATACGTGAAAGTGCATGGCGAAGGAAGATGGACTTCTGTTGCCACTGGTTCACGTAAAAACATATTCTCTTCCTTTTTTTTCCCTCTAAACTAGAAGATTAGAGTCAAGGATGTAAAATCAATCTTTTTCAAGTTTGAATAGAACGGGAAAAAGTTGCAGATTGAGATGGGTGAATTATCTTAGACCGGGTCTTAAGAGAGGCCATCTCACTCCTCTTGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGTAACAAGTAAGTAACTATTCTATAACAACTCAAACCCACCGCCAGCAGATATTGAGCTTTTTCAAACCCCTTCTTTGAGCTTTTCCTTTCGGACTTCCCGTCAAGGTTTTTAAAACGCATTTGTTAGGAGAAGTTTCCACACCTTTATAAAAAATGTTTCGTTCTCCACTCCAACTGATGTGAGATCTCATAATCTACCCACCTTCGAAGCCCAGCGTCGGGATCTCACATATTCCTCTCTCCACATTTTTTTTACCCATCTCTCTCTTAATCAAATGGATAATGTTTTAACTGACAGATGGTCAACCATAGCAAGATATTTACCAGGAAGAACTGATAATGAAATAAAAAATTACTGGAGAACGCATTTCAAGAAGATGAAGCCAAAGAGAGAAGCTCAAATGGTTGTTCCAAAACCAGACATCAAAACATCACCACCAATCAGCTTTGAACAAGACAGAGAGGAGAAAGATATGATGAAGCCATGTGAAAGAGACAATGATGAATTAGGGATGGTTTTTACAGAGCCTGCAGCCATGGCGGCTGATCAGAGCTACTTGTCAATGGTGTATGAAGATTTTGCAACTTGGGCGGCAGCTGCGGCGGCGGAAGAGAGCTACTTATGGGGTGGCCTTTGGGAAGATTCAAACAACCTTTTGTAA

mRNA sequence

ATGGATGCAGAAGAAAAAGAATGGAGGAAGGGACCATGGACTCCCGAGGAAGACAAGTTGTTGTCTGAATACGTGAAAGTGCATGGCGAAGGAAGATGGACTTCTGTTGCCACTGACATCAAAACATCACCACCAATCAGCTTTGAACAAGACAGAGAGGAGAAAGATATGATGAAGCCATGTGAAAGAGACAATGATGAATTAGGGATGGTTTTTACAGAGCCTGCAGCCATGGCGGCTGATCAGAGCTACTTGTCAATGGTGTATGAAGATTTTGCAACTTGGGCGGCAGCTGCGGCGGCGGAAGAGAGCTACTTATGGGGTGGCCTTTGGGAAGATTCAAACAACCTTTTGTAA

Coding sequence (CDS)

ATGGATGCAGAAGAAAAAGAATGGAGGAAGGGACCATGGACTCCCGAGGAAGACAAGTTGTTGTCTGAATACGTGAAAGTGCATGGCGAAGGAAGATGGACTTCTGTTGCCACTGACATCAAAACATCACCACCAATCAGCTTTGAACAAGACAGAGAGGAGAAAGATATGATGAAGCCATGTGAAAGAGACAATGATGAATTAGGGATGGTTTTTACAGAGCCTGCAGCCATGGCGGCTGATCAGAGCTACTTGTCAATGGTGTATGAAGATTTTGCAACTTGGGCGGCAGCTGCGGCGGCGGAAGAGAGCTACTTATGGGGTGGCCTTTGGGAAGATTCAAACAACCTTTTGTAA

Protein sequence

MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATDIKTSPPISFEQDREEKDMMKPCERDNDELGMVFTEPAAMAADQSYLSMVYEDFATWAAAAAAEESYLWGGLWEDSNNLL

Homology

[Close]

BLAST of Carg05894 vs. NCBI nr
Match: KAG7033217.1 (Transcription factor MYB23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.9 bits (629), Expect = 8.7e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATDIKTSPPISFEQDREEKDMMKP 60
           MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATDIKTSPPISFEQDREEKDMMKP
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATDIKTSPPISFEQDREEKDMMKP 60

Query: 61  CERDNDELGMVFTEPAAMAADQSYLSMVYEDFATWAAAAAAEESYLWGGLWEDSNNLL 119
           CERDNDELGMVFTEPAAMAADQSYLSMVYEDFATWAAAAAAEESYLWGGLWEDSNNLL
Sbjct: 61  CERDNDELGMVFTEPAAMAADQSYLSMVYEDFATWAAAAAAEESYLWGGLWEDSNNLL 118

[Close]

BLAST of Carg05894 vs. NCBI nr
Match: KAG6602540.1 (Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 118/204 (57.84%), Postives = 118/204 (57.84%), Query Frame = 0


Query: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT---------------------- 60
           MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT                      
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 61  ------------------------------------------------------------ 119
                                                                       
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

[Close]

BLAST of Carg05894 vs. NCBI nr
Match: XP_022954581.1 (transcription factor MYB59-like [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 6.5e-49
Identity = 116/204 (56.86%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT---------------------- 60
           MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT                      
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 61  ------------------------------------------------------------ 119
                                                                       
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

[Close]

BLAST of Carg05894 vs. NCBI nr
Match: XP_023554284.1 (transcription factor MYB59-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.6 bits (514), Expect = 1.9e-48
Identity = 116/204 (56.86%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT---------------------- 60
           MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT                      
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 61  ------------------------------------------------------------ 119
                                                                       
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

[Close]

BLAST of Carg05894 vs. NCBI nr
Match: XP_022990755.1 (transcription factor MYB59-like [Cucurbita maxima])

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-46
Identity = 114/204 (55.88%), Postives = 114/204 (55.88%), Query Frame = 0


Query: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT---------------------- 60
           MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT                      
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 61  ------------------------------------------------------------ 119
                                                                       
Sbjct: 61  LKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

[Close]

BLAST of Carg05894 vs. ExPASy Swiss-Prot
Match: Q96276 (Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 2  DAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          D +E E++KG WT EEDK+L +YV+ HG+G W  +A
Sbjct: 6  DGKEHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIA 41

[Close]

BLAST of Carg05894 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.0e-05
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 2  DAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          ++E++E R+GPWT EED LL+ Y+  +GEGRW  VA
Sbjct: 13 ESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVA 48

[Close]

BLAST of Carg05894 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.8e-05
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 0


Query: 9  RKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          R+GPWT EED LL  Y+  HGEGRW S+A
Sbjct: 21 RRGPWTVEEDLLLVNYIAAHGEGRWNSLA 49

[Close]

BLAST of Carg05894 vs. ExPASy Swiss-Prot
Match: Q9SEI0 (Transcription factor WER OS=Arabidopsis thaliana OX=3702 GN=WER PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.8e-05
Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0


Query: 2  DAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          D    E++KG WT EEDK+L +YVK HG+G W  +A
Sbjct: 10 DEGNNEYKKGLWTVEEDKILMDYVKAHGKGHWNRIA 45

[Close]

BLAST of Carg05894 vs. ExPASy Swiss-Prot
Match: Q8GYP5 (Transcription factor MYB60 OS=Arabidopsis thaliana OX=3702 GN=MYB60 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 0


Query: 9  RKGPWTPEEDKLLSEYVKVHGEGRWTSVATD 40
          +KGPWTPEED +L  Y++ HG G W SV T+
Sbjct: 13 KKGPWTPEEDIILVSYIQEHGPGNWRSVPTN 43

[Close]

BLAST of Carg05894 vs. ExPASy TrEMBL
Match: A0A6J1GRA0 (transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111456806 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49
Identity = 116/204 (56.86%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT---------------------- 60
           MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT                      
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 61  ------------------------------------------------------------ 119
                                                                       
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

[Close]

BLAST of Carg05894 vs. ExPASy TrEMBL
Match: A0A6J1JQZ1 (transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111487542 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.0e-47
Identity = 114/204 (55.88%), Postives = 114/204 (55.88%), Query Frame = 0


Query: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT---------------------- 60
           MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVAT                      
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 61  ------------------------------------------------------------ 119
                                                                       
Sbjct: 61  LKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

[Close]

BLAST of Carg05894 vs. ExPASy TrEMBL
Match: A0A1S3CAT1 (transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103498747 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.6e-15
Identity = 71/211 (33.65%), Postives = 82/211 (38.86%), Query Frame = 0


Query: 4   EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA-------------------------- 63
           EE+EWRKGPWT EEDKLL EYVKVHGEGRW+SVA                          
Sbjct: 5   EEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLKPGLKR 64

Query: 64  ------------------------------------------------------------ 117
                                                                       
Sbjct: 65  GHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPKPRRKSQIIV 124

[Close]

BLAST of Carg05894 vs. ExPASy TrEMBL
Match: A0A5A7T8Y5 (Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002300 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 70/209 (33.49%), Postives = 80/209 (38.28%), Query Frame = 0


Query: 4   EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA-------------------------- 63
           EE+EWRKGPWT EEDKLL EYVKVHGEGRW+SVA                          
Sbjct: 5   EEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64

Query: 64  ------------------------------------------------------------ 117
                                                                       
Sbjct: 65  GHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPRRKSQIIVPK 124

[Close]

BLAST of Carg05894 vs. ExPASy TrEMBL
Match: A0A0A0KSK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641610 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 64/199 (32.16%), Postives = 77/199 (38.69%), Query Frame = 0


Query: 4   EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA-------------------------- 63
           EE+EWRKGPWT +EDKLL EYVKVHGEGRW SVA                          
Sbjct: 33  EEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGLKR 92

Query: 64  ------------------------------------------------------------ 113
                                                                       
Sbjct: 93  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 152

[Close]

BLAST of Carg05894 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 61.2 bits (147), Expect = 6.3e-10
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 5  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          E+ WRKGPWT EED+LL EYV+VHGEGRW SV+
Sbjct: 3  EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVS 35

[Close]

BLAST of Carg05894 vs. TAIR 10
Match: AT3G24310.1 (myb domain protein 305 )

HSP 1 Score: 59.7 bits (143), Expect = 1.8e-09
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 5  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          E+ WRKGPWT EED+LL +YV++HGEGRW SVA
Sbjct: 15 EEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVA 47

[Close]

BLAST of Carg05894 vs. TAIR 10
Match: AT3G30210.1 (myb domain protein 121 )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 4  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          +++  RKGPWT EEDKLL+EYV  HGEGRW++VA
Sbjct: 23 QQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVA 56

[Close]

BLAST of Carg05894 vs. TAIR 10
Match: AT5G40330.1 (myb domain protein 23 )

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 2  DAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          D +E E++KG WT EEDK+L +YV+ HG+G W  +A
Sbjct: 6  DGKEHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIA 41

[Close]

BLAST of Carg05894 vs. TAIR 10
Match: AT1G68320.1 (myb domain protein 62 )

HSP 1 Score: 48.5 bits (114), Expect = 4.2e-06
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 2  DAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVA 38
          ++E++E R+GPWT EED LL+ Y+  +GEGRW  VA
Sbjct: 13 ESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVA 48

The following BLAST results are available for this feature:

BLAST of Carg05894 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033217.1	8.7e-62	100.00	Transcription factor MYB23, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602540.1	1.5e-50	57.84	Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954581.1	6.5e-49	56.86	transcription factor MYB59-like [Cucurbita moschata]	[more]
XP_023554284.1	1.9e-48	56.86	transcription factor MYB59-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990755.1	1.0e-46	55.88	transcription factor MYB59-like [Cucurbita maxima]	[more]

BLAST of Carg05894 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96276	1.6e-05	52.78	Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1	[more]
Q9C9G7	6.0e-05	55.56	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]
Q10MB4	7.8e-05	65.52	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
Q9SEI0	7.8e-05	52.78	Transcription factor WER OS=Arabidopsis thaliana OX=3702 GN=WER PE=1 SV=1	[more]
Q8GYP5	1.3e-04	58.06	Transcription factor MYB60 OS=Arabidopsis thaliana OX=3702 GN=MYB60 PE=1 SV=1	[more]

BLAST of Carg05894 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRA0	3.1e-49	56.86	transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111456806 PE...	[more]
A0A6J1JQZ1	5.0e-47	55.88	transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111487542 PE=4...	[more]
A0A1S3CAT1	6.6e-15	33.65	transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103498747 PE=4 SV=...	[more]
A0A5A7T8Y5	1.5e-14	33.49	Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KSK2	1.6e-13	32.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641610 PE=4 SV=1	[more]

BLAST of Carg05894 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13480.1	6.3e-10	75.76	myb domain protein 79	[more]
AT3G24310.1	1.8e-09	72.73	myb domain protein 305	[more]
AT3G30210.1	1.0e-07	67.65	myb domain protein 121	[more]
AT5G40330.1	1.1e-06	52.78	myb domain protein 23	[more]
AT1G68320.1	4.2e-06	55.56	myb domain protein 62	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 2..63 e-value: 3.6E-11 score: 44.6
None	No IPR available	PANTHER	PTHR45675:SF17	MYB TRANSCRIPTION FACTOR	coord: 4..38
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 10..40 e-value: 3.9E-9 score: 36.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 5..42 score: 12.978494
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 4..38
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 5..56 score: 7.549468
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..42 e-value: 2.29667E-6 score: 39.8662
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 8..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05894-RA	Carg05894-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010597	green leaf volatile biosynthetic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0043565	sequence-specific DNA binding