Carg05888 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05888
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Eukaryotic translation initiation factor 3 subunit M
Location	Carg_Chr04: 20936688 .. 20941379 (+)
RNA-Seq Expression	Carg05888
Synteny	Carg05888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGGGCTCTCAATTCTACGTGAGAATCGGAAGCTTTAATCAGCTAGGGTTTTCTGCAGCCTCCCTTGGCGCCTTATTGCTGTAAGTGAAGGGAGGAGAAGATCGGACCTTGGATTTGTTTCAGAGGTTCTACAATGGCGACTATCGTTCAAACATCTGAGGAAGATGCGGCGCTCACTGTCGTTCGCTTTGCCTCTGAGCTCGCTTGGGCCGACGCCGGTTCTGAGGTTCCCAATTTTTATTCTTTTACTTTCTCTTTCAATTCAATTTGGTGCGTTTGCGGCGCCGTCCATGTCTTGAGTTTGTGGTTGGCACTAAGCTTACACCTTCATCGAGATTTGTTTCTCGCTTCTCCACCGTCTATTTTAGGTTTTCTTTTTAATTTCATCGAGGAATATGGTTATTGATTTATTCTATCAGAACTTGAAAAATATGGTAAGCTGTTGCGATTTGGAGAGCCTGCATGATGCGTTCTTTCGTATGTGTAGTTCTGGTAATTGACGAAGATTATGTATTATCACAGACGTCGTAAGATGTGAGAAAACGTTGGTTAATGCGCTCTGCGAGGATACTAGTTCCTTTGCGTAATTTGTATAATCTTTGCTATGTCGGGATGGCTTGCGATTAGATTCTAGGTGCCTTTTCATTTGTTCATAGTCGAACAGTCGAGTGAAATTCGTGTTGTTTATATACTATCTTTTGTCTACTCGACGATGGACAAAACAAGGAATTTATCTTTCTCCTCTTTATTTCAAGCGCGATTATCTGAGTTTTTTGTTGTCCATGATGTCAATCAACCGAAATGCACTCTGCCTTTTGATACAATGAATCAACTTGTCACATGTTATTCGTTAGTCGTGGGGCTTATTATTTGGTGTTTGTTGTATTTAGGCTGCTGAGGCACAAGTTAATAGACTCTGCGTTGAAGCCCAAGAATGTATTGTTATGGGAAGATGGTTGGATTTGGCATCTCTAATGCTTACTTCTGCTGACTTGATATTTTCAAAGGTTTCTGAAAAAGGTAAATATAGTTTGGAATTGAAGAATAAGAGCATAACACTCCTGGATTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGTGATGATTACCTTCTGTTCAAGAGTTGAAATTGTAGCAGAATGAAGGTAGTTGAGGTTGCTTCTTTTATTGTGATTATTATCATATGAAACTTTCAAGTGGAATAATAGAAATGTCGTGTTTTAGTAGGAAAGAAAGTGGAGGAGAGAGAATGTTTCATCCGTGTAACTGATTCAGTTCTTTTCTTTTGGAACAGATCTTGAGTGTGTATTCACTGTTATCTGTAATCTTGTCACAAAGTCTGGGAGTCAAAAAGAATTGCTTGAAATGGCAGAGCTTATATCTTCAAAGATTGGCCAACAACCAAATGACAAACCTGCATTGCGCTTAAAGATGTAATGCATCTAATTTGTATATTTTGATTGTATGATTTGTTCTCTTTTTTCCTTTTCCCTCAAGGTTTCCTCTTTTACAGCTTGTTCAATCTGTACAACTTACTTGAGGATCCATATTGTCGGTTCCATGTTTACATGAAGGCCCTAGATTTAGCTCTTAAAGGGAAGGTCCCTGAACATATACTTCCATCATTAAAAAAGATGGAGAGTTTCTTGAGAGAGTGGAATATTGGAATTGTAGAGCAGAGACAACTTTTCCTCGCCATCGCTAATGTTTTGAAAGAAAGTAAGAGGTATTACAGAATGAATTATGCCACTAAACAAGTGCCATTTAATTATCCTTATCACGTTTTTACTTACACTATTTGTTACCTCTTTCTTTTTTCCTTTTGATATGAGGAATGTTTTTACGCTTACCAATAATTTAAAACTTAATTTGTTGTTGTTATCTTCTGTTTGATTTCAGTGCCGCAAATGATTATTTCAAGTTCCTTACCAAATACTTGGCAACTTTCTCCGGTGAAGATGCCCATACCTTGAGTGAAGCAAAGGAGGAAGCTGCTCATGCAATTGTTGAATTCGTAAGGGCACCGAACATGTTTAAGGTATTTTAGCATCTTCTGTAGTGAATTATATTTTCAAAGCTATTTTAGTATAGTTCAAACAACTTATTGCATTGTTACAATTCCATTTGATTCTGTATCACATCTAGCACTATGGGTCTAGGACAACCCTTTTGCTGGTCAATTTTTCTGTTCATACTTTGATGAGCTGTTTTTTCACTAGGGGTCTAGGACAACTCTTTTGCTGGTCAATTTTTCTGTTCATACTTTGATGAGCTGTTTTTTTCACTATCTTGCTACTTAGCACCTTGGAATGGTATTTTGGCTTTAGATTGATGGGGCCAACTTTTCTATTGGTTTTATCTGGTATACGATACGTTGGGTACTCATAAGAACTTGCCATTTGGCAGGGTTTATGAGGTGAAGCATCTGTGCTTTACTCTTGGTCTATTTGGGATTTCCTCCAGCTAGAAATCCTCCTGTCTCATTCTTTATAGACTGGAAAATATGAGAAAGCATTTTGCATGAATGTTTAGATAAGTAGCCAATATCTTCTTTGCTGTTTATGAGCTCAAGATATCACAGTCGAAGATGTTTGGTAGGAGAATACTGGTTCTTGGAGAATTTTGGCTGGGTGAAACGAAACCTGGGTGAGGAAATGGATGATTTGAGGGGACTTGTAGAGAAAAATTGAATGATGTTAATCCTTGAAGAAATGGTGATAATTGTAAGATGCTTGTTGGGAAGTTGTTTGCGAGATCGAGTATTATTTTTCACATTGATGGTTCGGGCTATGTTTGGTTCTTTTTTGTACTTTTGATAATTTAATTTTCAATAATTTCTTCTTCTTCTTCATTTTCATTGTGAGGATCTCATTCATTTTTCTTATAAAGTTCTTTGGACTGCATGCAAGTATTAAGGATGCATTTTTTTGGCTTGTTTATTTCTATTGGCTACTTATTGAATTATAAGAGAATATTTTACACGATAGCTTAATTCCGCATTTGTGTTTCAAATTTGAAGCTCATTGAAGTGTGATTTCTCTATGTTTGCAGTGTGACTTGTTAGACATGCCTGCTGTAGGGCAACTGGAGAATGATGCCAAATATTCTTTGGTTTATCAGCTTCTGAAGATTTTTCTGGCTCAGAGATTGGATGCTTACTTGGAATTTCAAGCTGCAAATTCTACTTTATTGAAAAGCTATGGTAAAATTCTCAAAGTTATACCTCTAAAAATAAGAGCGAAATTTTTTACTCATACTTGCTGGATGTATTCTTTACTCTGGTGTAGGTCTCGTTCATGAAGACTGTATAGCAAAAATGAGGTTATTGTCATTGGTGGATCTTGGCTCAAATGAATCTGCCCGCATTCCATATGCTCTCATCAAGGACACACTTAGGGTAGATATACATTACCTTTTACAGGATTTTCTTTTGAATTTTATTTAGTGATTTGATTGTGATCTGTGCTTTAGATCAATGATGATGAGGTGGAACTGTGGGTCGTGAAGGCCATTGCTTCCAAGTTGATTGACTGCAAAATGGACCAGATGAATGAAGTCGTGATTGTGAGGTGTGCTACACTGTATCCACATGGCTGCAATTCCCTTTTTTTTTGGTTAGCCTAAGTTTATTTAGAACTAATAGCTTTTGGATGCTCGTGTGCAGCCGATGTACTGAGCGTGTATTTGGGCAGTATCAATGGGAAACACTTAGGACGAAGCTAGCTACATGGAGGGTAAATTTTCTATTTTGTTTCTCATAATATCAAGATAGATAACATCTCATTGGTTGTCTAACTTCCTCTACATGTGCAACATTTCCTTTTTAACTGGCAACTTGAAAATTAATTCTTAGTCTTGACATCTGGATACCTAAATTTCCATTAGCAAGGACAATGAGTAGTAGTTCTCTGCCTTTCCCTATGATTTTCTGCCTTAATAACACTACAATGGTCGATACTTTTGCAGGGTAATATTGCGAATGTGATTGGCACCATACGAGCAAACAAAATAGTTGATGATGGATCACAGGCTGTGCAAGGTTTGGCAATTCGCTGAAGAGTGGATTTTTTGTTGATCTGTAAGTTAAATCGCCTACCGTTCCTGATTAATACTAGGATGTCTCATGTTCTGCTCAATCCTCTGAATTTGTTCAAATTTTGACATGGAGAACTACATTTGAATAGGAGCTGTTGGTTTTACATTAGTGGACTGTATCAATCATCTACACTCCAGGACTTTCAATCAGCTCTCTGATCTTAATTTATTTGAGTAGTGGTATTTTTTGTTTTCATCCCACCTTAGATCAATTCGTTTAAATATATTTTATTTGTTTGGTGAATAATATAGCTATGGTTGTTCTTTTTCTATAGTTATGTGTCCATGTCATGTCTAGTTTAGACATAATTAAACATCTCTTTGTTATCCACGTCTGATCGTTATGGGTTGGTCAGTCCTGCTTTGTGAACATGATATAAATTATGCCTGCTTCTCTTCTTTTGTACATCAAGCTTCAAATGCCCCCCATACTTGAAAATGGTTCAGCATGGGAGGTGTCAAAATGTCCCATGGAGATGCAACCCCTGGGGGGATGTGCCTTGATCGAGTCGAGGATCAGGACATTCTTTCCGCGTGTCTGGCCCCAAACACCGATCCTTGTAAATAATGTTATATATATTTCAGATCTAAACT

mRNA sequence

AAAAAGGGCTCTCAATTCTACGTGAGAATCGGAAGCTTTAATCAGCTAGGGTTTTCTGCAGCCTCCCTTGGCGCCTTATTGCTGTAAGTGAAGGGAGGAGAAGATCGGACCTTGGATTTGTTTCAGAGGTTCTACAATGGCGACTATCGTTCAAACATCTGAGGAAGATGCGGCGCTCACTGTCGTTCGCTTTGCCTCTGAGCTCGCTTGGGCCGACGCCGGTTCTGAGGCTGCTGAGGCACAAGTTAATAGACTCTGCGTTGAAGCCCAAGAATGTATTGTTATGGGAAGATGGTTGGATTTGGCATCTCTAATGCTTACTTCTGCTGACTTGATATTTTCAAAGGTTTCTGAAAAAGATCTTGAGTGTGTATTCACTGTTATCTGTAATCTTGTCACAAAGTCTGGGAGTCAAAAAGAATTGCTTGAAATGGCAGAGCTTATATCTTCAAAGATTGGCCAACAACCAAATGACAAACCTGCATTGCGCTTAAAGATCTTGTTCAATCTGTACAACTTACTTGAGGATCCATATTGTCGGTTCCATGTTTACATGAAGGCCCTAGATTTAGCTCTTAAAGGGAAGGTCCCTGAACATATACTTCCATCATTAAAAAAGATGGAGAGTTTCTTGAGAGAGTGGAATATTGGAATTGTAGAGCAGAGACAACTTTTCCTCGCCATCGCTAATGTTTTGAAAGAAAGTAAGAGTGCCGCAAATGATTATTTCAAGTTCCTTACCAAATACTTGGCAACTTTCTCCGGTGAAGATGCCCATACCTTGAGTGAAGCAAAGGAGGAAGCTGCTCATGCAATTGTTGAATTCGTAAGGGCACCGAACATGTTTAAGTGTGACTTGTTAGACATGCCTGCTGTAGGGCAACTGGAGAATGATGCCAAATATTCTTTGGTTTATCAGCTTCTGAAGATTTTTCTGGCTCAGAGATTGGATGCTTACTTGGAATTTCAAGCTGCAAATTCTACTTTATTGAAAAGCTATGGTCTCGTTCATGAAGACTGTATAGCAAAAATGAGGTTATTGTCATTGGTGGATCTTGGCTCAAATGAATCTGCCCGCATTCCATATGCTCTCATCAAGGACACACTTAGGATCAATGATGATGAGGTGGAACTGTGGGTCGTGAAGGCCATTGCTTCCAAGTTGATTGACTGCAAAATGGACCAGATGAATGAAGTCGTGATTGTGAGCCGATGTACTGAGCGTGTATTTGGGCAGTATCAATGGGAAACACTTAGGACGAAGCTAGCTACATGGAGGGGTAATATTGCGAATGTGATTGGCACCATACGAGCAAACAAAATAGTTGATGATGGATCACAGGCTGTGCAAGGTTTGGCAATTCGCTGAAGAGTGGATTTTTTGTTGATCTGTAAGTTAAATCGCCTACCGTTCCTGATTAATACTAGGATGTCTCATGTTCTGCTCAATCCTCTGAATTTGTTCAAATTTTGACATGGAGAACTACATTTGAATAGGAGCTGTTGGTTTTACATTAGTGGACTGTATCAATCATCTACACTCCAGGACTTTCAATCAGCTCTCTGATCTTAATTTATTTGAGTAGTGGTATTTTTTGTTTTCATCCCACCTTAGATCAATTCGTTTAAATATATTTTATTTGTTTGGTGAATAATATAGCTATGGTTGTTCTTTTTCTATAGTTATGTGTCCATGTCATGTCTAGTTTAGACATAATTAAACATCTCTTTGTTATCCACGTCTGATCGTTATGGGTTGGTCAGTCCTGCTTTGTGAACATGATATAAATTATGCCTGCTTCTCTTCTTTTGTACATCAAGCTTCAAATGCCCCCCATACTTGAAAATGGTTCAGCATGGGAGGTGTCAAAATGTCCCATGGAGATGCAACCCCTGGGGGGATGTGCCTTGATCGAGTCGAGGATCAGGACATTCTTTCCGCGTGTCTGGCCCCAAACACCGATCCTTGTAAATAATGTTATATATATTTCAGATCTAAACT

Coding sequence (CDS)

ATGGCGACTATCGTTCAAACATCTGAGGAAGATGCGGCGCTCACTGTCGTTCGCTTTGCCTCTGAGCTCGCTTGGGCCGACGCCGGTTCTGAGGCTGCTGAGGCACAAGTTAATAGACTCTGCGTTGAAGCCCAAGAATGTATTGTTATGGGAAGATGGTTGGATTTGGCATCTCTAATGCTTACTTCTGCTGACTTGATATTTTCAAAGGTTTCTGAAAAAGATCTTGAGTGTGTATTCACTGTTATCTGTAATCTTGTCACAAAGTCTGGGAGTCAAAAAGAATTGCTTGAAATGGCAGAGCTTATATCTTCAAAGATTGGCCAACAACCAAATGACAAACCTGCATTGCGCTTAAAGATCTTGTTCAATCTGTACAACTTACTTGAGGATCCATATTGTCGGTTCCATGTTTACATGAAGGCCCTAGATTTAGCTCTTAAAGGGAAGGTCCCTGAACATATACTTCCATCATTAAAAAAGATGGAGAGTTTCTTGAGAGAGTGGAATATTGGAATTGTAGAGCAGAGACAACTTTTCCTCGCCATCGCTAATGTTTTGAAAGAAAGTAAGAGTGCCGCAAATGATTATTTCAAGTTCCTTACCAAATACTTGGCAACTTTCTCCGGTGAAGATGCCCATACCTTGAGTGAAGCAAAGGAGGAAGCTGCTCATGCAATTGTTGAATTCGTAAGGGCACCGAACATGTTTAAGTGTGACTTGTTAGACATGCCTGCTGTAGGGCAACTGGAGAATGATGCCAAATATTCTTTGGTTTATCAGCTTCTGAAGATTTTTCTGGCTCAGAGATTGGATGCTTACTTGGAATTTCAAGCTGCAAATTCTACTTTATTGAAAAGCTATGGTCTCGTTCATGAAGACTGTATAGCAAAAATGAGGTTATTGTCATTGGTGGATCTTGGCTCAAATGAATCTGCCCGCATTCCATATGCTCTCATCAAGGACACACTTAGGATCAATGATGATGAGGTGGAACTGTGGGTCGTGAAGGCCATTGCTTCCAAGTTGATTGACTGCAAAATGGACCAGATGAATGAAGTCGTGATTGTGAGCCGATGTACTGAGCGTGTATTTGGGCAGTATCAATGGGAAACACTTAGGACGAAGCTAGCTACATGGAGGGGTAATATTGCGAATGTGATTGGCACCATACGAGCAAACAAAATAGTTGATGATGGATCACAGGCTGTGCAAGGTTTGGCAATTCGCTGA

Protein sequence

MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLMLTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLKILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLFLAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCDLLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRCTERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR

Homology

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BLAST of Carg05888 vs. NCBI nr
Match: KAG7033211.1 (Eukaryotic translation initiation factor 3 subunit M [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 793.9 bits (2049), Expect = 6.6e-226
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR
Sbjct: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 410

[Close]

BLAST of Carg05888 vs. NCBI nr
Match: XP_023538105.1 (eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538114.1 eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 792.3 bits (2045), Expect = 1.9e-225
Identity = 408/410 (99.51%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSK+SEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKISEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKM+SFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMDSFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR
Sbjct: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 410

[Close]

BLAST of Carg05888 vs. NCBI nr
Match: XP_022954439.1 (eukaryotic translation initiation factor 3 subunit M-like [Cucurbita moschata] >XP_022954446.1 eukaryotic translation initiation factor 3 subunit M-like [Cucurbita moschata])

HSP 1 Score: 789.6 bits (2038), Expect = 1.3e-224
Identity = 407/410 (99.27%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIANVLKESKSAANDYFKFLTKYL TFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAIANVLKESKSAANDYFKFLTKYLVTFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGSNESARIPY+LIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYSLIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR
Sbjct: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 410

[Close]

BLAST of Carg05888 vs. NCBI nr
Match: KAG6602535.1 (Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 406/407 (99.75%), Postives = 406/407 (99.75%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGL 408
           TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQ L
Sbjct: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQAL 407

[Close]

BLAST of Carg05888 vs. NCBI nr
Match: XP_022990653.1 (eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucurbita maxima] >XP_022990654.1 eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 785.0 bits (2026), Expect = 3.1e-223
Identity = 403/410 (98.29%), Postives = 408/410 (99.51%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKD+ECVFTVICNLVTKSGSQKEL EMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDMECVFTVICNLVTKSGSQKELFEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPE+ILPSLKKMESFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEYILPSLKKMESFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LA+ANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAVANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGS ESARIPYALI+DTLRINDDEVELWVVKAIASKLIDCKMDQMNEVV+VSRC
Sbjct: 301 LLSLVDLGSKESARIPYALIRDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVVVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR
Sbjct: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 410

[Close]

BLAST of Carg05888 vs. ExPASy Swiss-Prot
Match: Q54KZ8 (Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum OX=44689 GN=eif3m PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-53
Identity = 116/346 (33.53%), Postives = 207/346 (59.83%), Query Frame = 0


Query: 56  LASLMLTSADLIFS--KVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPND 115
           L+ ++    + +F   K S+KD+E  F VI  ++ K  ++ E+  +++ I   +   P +
Sbjct: 50  LSKIVSNETEFLFKECKDSDKDIEGFFNVILTILHKLENEDEINIVSQKIRDSLSAHPTE 109

Query: 116 KPALRLKILFNLYNLLEDPYC-RFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIG 175
              L++KIL NL+N  +     R+ ++   + LA      E +   +  ++S+L +WN+ 
Sbjct: 110 NSQLKIKILTNLFNSFQPKSTQRYDIFFALVKLASDSNNLEFVKYQITDIDSWLEDWNVS 169

Query: 176 IVEQRQLFLAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVR 235
           I ++R+L+  I+N+ KE +   +   +FL KYL TF+ ED+    EA+E+A    +E + 
Sbjct: 170 IQQKRKLYKLISNIFKEKQRMLS--HQFLVKYLQTFTKEDS---QEAQEDAVRVCIESIS 229

Query: 236 APNMFKCD-LLDMPAVGQLEND--AKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYG 295
              +++ D LLD+PAV  LE    +  SL Y+L+KIF  ++LD++L+FQ  N   L + G
Sbjct: 230 LQELYQSDYLLDLPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTIG 289

Query: 296 LVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMD 355
           L ++DC+ K+RLLSL  L ++E +++PY+LI   L+I+++EVE+WV+ A+   L+D K+D
Sbjct: 290 LSNDDCLQKIRLLSLATL-TSEQSKVPYSLISKMLQIDENEVEMWVINAMEGDLLDAKLD 349

Query: 356 QMNEVVIVSRCTERVFGQYQWETLRTKLATWRGNIANVIGTIRANK 396
           Q+N +V V+  T+RVF + QW  L  + + W+ ++ N++  I   K
Sbjct: 350 QLNRIVNVNSSTQRVFNKSQWSQLGQRFSVWKSSVKNLLQVIENAK 389

[Close]

BLAST of Carg05888 vs. ExPASy Swiss-Prot
Match: Q5ZJ64 (Eukaryotic translation initiation factor 3 subunit M OS=Gallus gallus OX=9031 GN=EIF3M PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-33
Identity = 94/320 (29.38%), Postives = 177/320 (55.31%), Query Frame = 0


Query: 70  KVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLKILFNLYNLL 129
           K  +KD+E V   + +L+      K+   +  L    +  +  ++P+LRL++L NL++ +
Sbjct: 54  KEDDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGM 113

Query: 130 E-DPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLFLAIANVLK 189
           + +   R+ VY   L +A      ++I   L ++  ++ +WN+   ++  L   + +VL 
Sbjct: 114 DKNTPVRYTVYCSLLKVASSCGAIQYIPTELDQVRKWISDWNLSTDKKHTLLRLLYDVLV 173

Query: 190 ESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD-LLDMPAV 249
           + K  ++   K + + L +++ ++A   S+A+ +A   IV  ++ PN F  D LL +  V
Sbjct: 174 DCKK-SDTAAKVMVELLGSYTEDNA---SQARVDAHRCIVRALKDPNTFLFDHLLALKPV 233

Query: 250 GQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLLSLVDL 309
             LE +    L++ LL IF++ +L +Y++F   N   + S GL+HE  +AKMRLL+ + +
Sbjct: 234 KFLEGE----LIHDLLTIFVSAKLVSYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGM 293

Query: 310 GSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRCTERVFGQ 369
            + E+  I +  ++  L+I  D+VE +V+ A+ +K++ CK+DQ    V+VS  T R FG+
Sbjct: 294 -AVENKEISFDTMQQELQIGADDVEAFVIDAVKTKMVYCKIDQTQRKVVVSHSTHRTFGK 353

Query: 370 YQWETLRTKLATWRGNIANV 388
            QW+ L   L TW+ N+  V
Sbjct: 354 QQWQQLYDTLNTWKQNLNQV 364

[Close]

BLAST of Carg05888 vs. ExPASy Swiss-Prot
Match: A7SPX9 (Eukaryotic translation initiation factor 3 subunit M OS=Nematostella vectensis OX=45351 GN=v1g192238 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-33
Identity = 95/325 (29.23%), Postives = 178/325 (54.77%), Query Frame = 0


Query: 73  EKDLECVFTVICNLVTKSGSQKELL--EMAELISSKIGQQPNDKPALRLKILFNLYN-LL 132
           + +LE V   I +LV     ++  L  +  + + + + +  N   A RL++L  L++ L 
Sbjct: 57  DAELESVMNSILSLVLVVPEKRNELIKKCCDKLKANMSEDENSSAAARLRVLSVLFSGLP 116

Query: 133 EDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLFLAIANVLKE 192
           E    R  VY   L +A K  + + I   L+ ++ +L  W++   ++RQ+F  +   L +
Sbjct: 117 EKDPMRHEVYCTQLTIAAKASLVDDIPTELELVKGWLGLWDVDADQRRQVFRLLHGALHD 176

Query: 193 SKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD-LLDMPAVG 252
            K  + +  K + + L+T++ E+A   S A+E+A   +V  +  PN+   D +L +  V 
Sbjct: 177 EK-RSEEASKVMIELLSTYTDENA---SAAREDAKSCVVSCLTKPNVLIMDNILSLKPVA 236

Query: 253 QLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLLSLVDLG 312
            L+ D     +YQLL+IF++  +  Y +F  +N+  + S GL HE  + KMR+L+L+ +G
Sbjct: 237 VLQGDP----IYQLLQIFVSGDVQDYKKFYDSNTDFINSIGLSHEMNLKKMRVLTLMSIG 296

Query: 313 SNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRCTERVFGQY 372
             E+  I Y  +   L I+ DE+E ++++AI + L+  ++DQ++  VI+S   +R FG  
Sbjct: 297 -KETDEISYEDLATKLGISSDEIEQFLIEAIQTGLVKARLDQVHRKVIISSVAQRTFGIN 356

Query: 373 QWETLRTKLATWRGNIANVIGTIRA 394
           QW+ L ++L  WR N+ +V G +++
Sbjct: 357 QWQNLHSRLVKWRDNLLSVRGGLQS 372

[Close]

BLAST of Carg05888 vs. ExPASy Swiss-Prot
Match: Q5R8C4 (Eukaryotic translation initiation factor 3 subunit M OS=Pongo abelii OX=9601 GN=EIF3M PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-32
Identity = 96/339 (28.32%), Postives = 183/339 (53.98%), Query Frame = 0


Query: 51  GRWLDLASLMLTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQ 110
           G  +DLA ++   A  +  K  +KD+E V   + +L+      K+   +  L    +  +
Sbjct: 37  GLHIDLAQII--EACDVCLKEDDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFR 96

Query: 111 PNDKPALRLKILFNLYNLLE-DPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREW 170
             ++P+LRL++L NL++ ++ +   R+ VY   + +A      ++I   L ++  ++ +W
Sbjct: 97  EGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDW 156

Query: 171 NIGIVEQRQLFLAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVE 230
           N+   ++  L   +   L + K  ++   K + + L +++ ++A   S+A+ +A   IV 
Sbjct: 157 NLTTEKKHTLLRLLYEALVDCKK-SDAASKVMVELLGSYTEDNA---SQARVDAHRCIVR 216

Query: 231 FVRAPNMFKCD-LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSY 290
            ++ PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F   N   + S 
Sbjct: 217 ALKDPNAFLFDHLLTLKPVKFLEGE----LIHDLLTIFVSAKLASYVKFYQNNKDFIDSL 276

Query: 291 GLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKM 350
           GL+HE  +AKMRLL+ + + + E+  I +  ++  L+I  D+VE +V+ A+ +K++ CK+
Sbjct: 277 GLLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKI 336

Query: 351 DQMNEVVIVSRCTERVFGQYQWETLRTKLATWRGNIANV 388
           DQ    V+VS  T R FG+ QW+ L   L  W+ N+  V
Sbjct: 337 DQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKV 364

[Close]

BLAST of Carg05888 vs. ExPASy Swiss-Prot
Match: Q7L2H7 (Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=EIF3M PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-32
Identity = 96/339 (28.32%), Postives = 183/339 (53.98%), Query Frame = 0


Query: 51  GRWLDLASLMLTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQ 110
           G  +DLA ++   A  +  K  +KD+E V   + +L+      K+   +  L    +  +
Sbjct: 37  GLHVDLAQII--EACDVCLKEDDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFR 96

Query: 111 PNDKPALRLKILFNLYNLLE-DPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREW 170
             ++P+LRL++L NL++ ++ +   R+ VY   + +A      ++I   L ++  ++ +W
Sbjct: 97  EGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDW 156

Query: 171 NIGIVEQRQLFLAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVE 230
           N+   ++  L   +   L + K  ++   K + + L +++ ++A   S+A+ +A   IV 
Sbjct: 157 NLTTEKKHTLLRLLYEALVDCKK-SDAASKVMVELLGSYTEDNA---SQARVDAHRCIVR 216

Query: 231 FVRAPNMFKCD-LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSY 290
            ++ PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F   N   + S 
Sbjct: 217 ALKDPNAFLFDHLLTLKPVKFLEGE----LIHDLLTIFVSAKLASYVKFYQNNKDFIDSL 276

Query: 291 GLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKM 350
           GL+HE  +AKMRLL+ + + + E+  I +  ++  L+I  D+VE +V+ A+ +K++ CK+
Sbjct: 277 GLLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKI 336

Query: 351 DQMNEVVIVSRCTERVFGQYQWETLRTKLATWRGNIANV 388
           DQ    V+VS  T R FG+ QW+ L   L  W+ N+  V
Sbjct: 337 DQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKV 364

[Close]

BLAST of Carg05888 vs. ExPASy TrEMBL
Match: A0A6J1GT02 (Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita moschata OX=3662 GN=LOC111456700 PE=3 SV=1)

HSP 1 Score: 789.6 bits (2038), Expect = 6.1e-225
Identity = 407/410 (99.27%), Postives = 409/410 (99.76%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIANVLKESKSAANDYFKFLTKYL TFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAIANVLKESKSAANDYFKFLTKYLVTFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGSNESARIPY+LIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYSLIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR
Sbjct: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 410

[Close]

BLAST of Carg05888 vs. ExPASy TrEMBL
Match: A0A6J1JSL9 (Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita maxima OX=3661 GN=LOC111487473 PE=3 SV=1)

HSP 1 Score: 785.0 bits (2026), Expect = 1.5e-223
Identity = 403/410 (98.29%), Postives = 408/410 (99.51%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKD+ECVFTVICNLVTKSGSQKEL EMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDMECVFTVICNLVTKSGSQKELFEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPE+ILPSLKKMESFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEYILPSLKKMESFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LA+ANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAVANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGS ESARIPYALI+DTLRINDDEVELWVVKAIASKLIDCKMDQMNEVV+VSRC
Sbjct: 301 LLSLVDLGSKESARIPYALIRDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVVVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR
Sbjct: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 410

[Close]

BLAST of Carg05888 vs. ExPASy TrEMBL
Match: A0A6J1JNJ2 (Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita maxima OX=3661 GN=LOC111487473 PE=3 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.1e-218
Identity = 403/441 (91.38%), Postives = 408/441 (92.52%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM
Sbjct: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKD+ECVFTVICNLVTKSGSQKEL EMAELISSKIGQQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDMECVFTVICNLVTKSGSQKELFEMAELISSKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPE+ILPSLKKMESFLREWNIGIVEQRQLF
Sbjct: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEYILPSLKKMESFLREWNIGIVEQRQLF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LA+ANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD
Sbjct: 181 LAVANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIV--- 360
           LLSLVDLGS ESARIPYALI+DTLRINDDEVELWVVKAIASKLIDCKMDQMNEVV+V   
Sbjct: 301 LLSLVDLGSKESARIPYALIRDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVVVRCA 360

Query: 361 ----------------------------SRCTERVFGQYQWETLRTKLATWRGNIANVIG 411
                                       SRCTERVFGQYQWETLRTKLATWRGNIANVIG
Sbjct: 361 RLYPHGCNSLFLVSLSLFRTNSFWMLVCSRCTERVFGQYQWETLRTKLATWRGNIANVIG 420

[Close]

BLAST of Carg05888 vs. ExPASy TrEMBL
Match: A0A5D3BNN4 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002400 PE=3 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 3.9e-208
Identity = 373/410 (90.98%), Postives = 394/410 (96.10%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MAT+VQTSEEDAALTVVRFASELAWADAG E AE QVNRLCVEAQEC+VMGRWLDLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTK+GS  E LEMA+LIS+KI QQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLE+PY RFHVYMKALDLA KGK PEHI+P+LKK+ESFLREWNIGIVEQR+LF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAI+NVLKESKS+ANDYFKFLTKYLATFSGEDA TLSEAKEEA HAIVEFV+APNMFKCD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLE DAKYSLVYQLLKIFL QRLDAY+EFQAANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTL+INDDEVELWVVKAI SKLIDCKMDQMNEVVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           T+RVFGQ+QWETLRTKL TWRGNIANVIGTIRANKIV+DGSQA+QGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of Carg05888 vs. ExPASy TrEMBL
Match: A0A1S3CA60 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo OX=3656 GN=LOC103498537 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.5e-207
Identity = 372/410 (90.73%), Postives = 393/410 (95.85%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           MAT+VQTSEEDAALTVVRFASELAWADAG E AE QVNRLCVEAQEC+VMGRWLDLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTK+GS  E LEMA+LIS+KI QQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNLLE+PY RFHVYMKALDLA KGK PEHI+P+LKK+ESFLREWNIGIVEQR+LF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAI+NVLKESKS+ANDYFKFLTKYLATFSGEDA TLSEAKEEA HAIVEFV+APNMFKCD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLE DAKYSLVYQLLKIFL QRLDAY+EFQAANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTL+ NDDEVELWVVKAI SKLIDCKMDQMNEVVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQTNDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQAVQGLAIR 411
           T+RVFGQ+QWETLRTKL TWRGNIANVIGTIRANKIV+DGSQA+QGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of Carg05888 vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 545.4 bits (1404), Expect = 3.8e-155
Identity = 271/413 (65.62%), Postives = 338/413 (81.84%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           M TIV TSEED  L +VRF S+LAWADAG E AE +V+RLC EA+E I+ G+WLDLA+LM
Sbjct: 1   MTTIVPTSEEDPYLAIVRFTSQLAWADAGPEVAEPEVSRLCKEAEESIINGKWLDLATLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           +TSADL+ +K+SEKDLEC +T+ICNLV  + S +E+LEM + I++K+ QQPNDK +LRLK
Sbjct: 61  VTSADLVSAKISEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKASLRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNL++ P  RF VYMKAL+LA+ GKV E+I+PS KK++SFL+EWNI I +QR+LF
Sbjct: 121 ILFNLYNLVDHPNARFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNIDIKDQRELF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIA VL+E+KS A +  +F+T YLATFS ED   LSEAKEEA  A++EFV+AP++F+CD
Sbjct: 181 LAIAKVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD PAV QLE D   + VYQLLKIFL QRLDAY+EFQ ANS  L++YGLV EDC+AKMR
Sbjct: 241 LLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDL S++S +IPYA IK+TL++ND+EVELWVVKAI +KL+ CKMDQMN+VVIVSRC
Sbjct: 301 LLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVSRC 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQ---AVQGLAIR 411
            ER FGQ QW++LRTKLA WR N+ NVI TI +NK  ++G+Q   A QGL +R
Sbjct: 361 AEREFGQKQWQSLRTKLAAWRDNVRNVISTIESNKATEEGTQTSSAAQGLTVR 413

[Close]

BLAST of Carg05888 vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 536.6 bits (1381), Expect = 1.8e-152
Identity = 266/417 (63.79%), Postives = 342/417 (82.01%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           M TIV TSEE+  L VVRF S+LAWADAG EAAE ++ RLC EA+E +V  +WL+L+SLM
Sbjct: 1   MTTIVPTSEENPFLAVVRFTSQLAWADAGPEAAEPEITRLCREAEESMVAEKWLELSSLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           +TSA+L+ SK+SEKDLEC +T+IC++V  + S +++LEM + I+SK+ QQP+DK +LRLK
Sbjct: 61  VTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNL++ PY RF VYMKAL LA+ GKV E+I+ S KK+++FL+EWNI I +QR+LF
Sbjct: 121 ILFNLYNLVDHPYARFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEWNIDIKDQRELF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIANVLKE+KS  N+  KFLTKYLATFS EDA  L EAKEEA  A++EFV+A ++F+CD
Sbjct: 181 LAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD+PAV QLE DAKY+ VYQLLKIFL QRL+AY EFQ ANS  L+SYGL +EDC+ KMR
Sbjct: 241 LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIVSRC 360
           LLSLVDL S+ES +IPY  IKDTL++N+ +VELW+VKAI +KLI+CKMDQMN+V+IVSR 
Sbjct: 301 LLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIVSRS 360

Query: 361 TERVFGQYQWETLRTKLATWRGNIANVIGTIRANKIVDDGSQ-------AVQGLAIR 411
           +ER FG  QW++LRTKLATW+ NI+++I TI +NK+ ++GSQ       A+QGL++R
Sbjct: 361 SEREFGTKQWQSLRTKLATWKDNISSIITTIESNKVTEEGSQASSSSAAAIQGLSVR 417

[Close]

BLAST of Carg05888 vs. TAIR 10
Match: AT5G15610.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 530.0 bits (1364), Expect = 1.7e-150
Identity = 271/442 (61.31%), Postives = 338/442 (76.47%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           M TIV TSEED  L +VRF S+LAWADAG E AE +V+RLC EA+E I+ G+WLDLA+LM
Sbjct: 1   MTTIVPTSEEDPYLAIVRFTSQLAWADAGPEVAEPEVSRLCKEAEESIINGKWLDLATLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           +TSADL+ +K+SEKDLEC +T+ICNLV  + S +E+LEM + I++K+ QQPNDK +LRLK
Sbjct: 61  VTSADLVSAKISEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKASLRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNL++ P  RF VYMKAL+LA+ GKV E+I+PS KK++SFL+EWNI I +QR+LF
Sbjct: 121 ILFNLYNLVDHPNARFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNIDIKDQRELF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIA VL+E+KS A +  +F+T YLATFS ED   LSEAKEEA  A++EFV+AP++F+CD
Sbjct: 181 LAIAKVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD PAV QLE D   + VYQLLKIFL QRLDAY+EFQ ANS  L++YGLV EDC+AKMR
Sbjct: 241 LLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIV--- 360
           LLSLVDL S++S +IPYA IK+TL++ND+EVELWVVKAI +KL+ CKMDQMN+VVIV   
Sbjct: 301 LLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVRQV 360

Query: 361 --------------------------SRCTERVFGQYQWETLRTKLATWRGNIANVIGTI 411
                                     SRC ER FGQ QW++LRTKLA WR N+ NVI TI
Sbjct: 361 SNLLLFRFICVNPKSHILVLHICSCISRCAEREFGQKQWQSLRTKLAAWRDNVRNVISTI 420

[Close]

BLAST of Carg05888 vs. TAIR 10
Match: AT3G02200.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 473.8 bits (1218), Expect = 1.4e-133
Identity = 235/357 (65.83%), Postives = 297/357 (83.19%), Query Frame = 0


Query: 1   MATIVQTSEEDAALTVVRFASELAWADAGSEAAEAQVNRLCVEAQECIVMGRWLDLASLM 60
           M TIV TSEE+  L VVRF S+LAWADAG EAAE ++ RLC EA+E +V  +WL+L+SLM
Sbjct: 1   MTTIVPTSEENPFLAVVRFTSQLAWADAGPEAAEPEITRLCREAEESMVAEKWLELSSLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKSGSQKELLEMAELISSKIGQQPNDKPALRLK 120
           +TSA+L+ SK+SEKDLEC +T+IC++V  + S +++LEM + I+SK+ QQP+DK +LRLK
Sbjct: 61  VTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK 120

Query: 121 ILFNLYNLLEDPYCRFHVYMKALDLALKGKVPEHILPSLKKMESFLREWNIGIVEQRQLF 180
           ILFNLYNL++ PY RF VYMKAL LA+ GKV E+I+ S KK+++FL+EWNI I +QR+LF
Sbjct: 121 ILFNLYNLVDHPYARFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEWNIDIKDQRELF 180

Query: 181 LAIANVLKESKSAANDYFKFLTKYLATFSGEDAHTLSEAKEEAAHAIVEFVRAPNMFKCD 240
           LAIANVLKE+KS  N+  KFLTKYLATFS EDA  L EAKEEA  A++EFV+A ++F+CD
Sbjct: 181 LAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD 240

Query: 241 LLDMPAVGQLENDAKYSLVYQLLKIFLAQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD+PAV QLE DAKY+ VYQLLKIFL QRL+AY EFQ ANS  L+SYGL +EDC+ KMR
Sbjct: 241 LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAIASKLIDCKMDQMNEVVIV 358
           LLSLVDL S+ES +IPY  IKDTL++N+ +VELW+VKAI +KLI+CKMDQMN+V+IV
Sbjct: 301 LLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 357

The following BLAST results are available for this feature:

BLAST of Carg05888 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033211.1	6.6e-226	100.00	Eukaryotic translation initiation factor 3 subunit M [Cucurbita argyrosperma sub...	[more]
XP_023538105.1	1.9e-225	99.51	eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucurbita ...	[more]
XP_022954439.1	1.3e-224	99.27	eukaryotic translation initiation factor 3 subunit M-like [Cucurbita moschata] >...	[more]
KAG6602535.1	1.1e-223	99.75	Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyros...	[more]
XP_022990653.1	3.1e-223	98.29	eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucurbita ...	[more]

BLAST of Carg05888 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KZ8	1.1e-53	33.53	Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum...	[more]
Q5ZJ64	1.2e-33	29.38	Eukaryotic translation initiation factor 3 subunit M OS=Gallus gallus OX=9031 GN...	[more]
A7SPX9	2.1e-33	29.23	Eukaryotic translation initiation factor 3 subunit M OS=Nematostella vectensis O...	[more]
Q5R8C4	1.4e-32	28.32	Eukaryotic translation initiation factor 3 subunit M OS=Pongo abelii OX=9601 GN=...	[more]
Q7L2H7	1.8e-32	28.32	Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=...	[more]

BLAST of Carg05888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GT02	6.1e-225	99.27	Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita moschata OX=36...	[more]
A0A6J1JSL9	1.5e-223	98.29	Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita maxima OX=3661...	[more]
A0A6J1JNJ2	1.1e-218	91.38	Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita maxima OX=3661...	[more]
A0A5D3BNN4	3.9e-208	90.98	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]
A0A1S3CA60	1.5e-207	90.73	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Carg05888 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15610.2	3.8e-155	65.62	Proteasome component (PCI) domain protein	[more]
AT3G02200.2	1.8e-152	63.79	Proteasome component (PCI) domain protein	[more]
AT5G15610.1	1.7e-150	61.31	Proteasome component (PCI) domain protein	[more]
AT3G02200.1	1.4e-133	65.83	Proteasome component (PCI) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00753	PINT	coord: 290..380 e-value: 2.3E-12 score: 57.0
None	No IPR available	PANTHER	PTHR15350	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	coord: 1..405
None	No IPR available	PANTHER	PTHR15350:SF14	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT M	coord: 1..405
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 290..380 e-value: 2.3E-12 score: 57.0
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 260..359 e-value: 9.5E-13 score: 48.6
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 196..362 score: 16.442068
IPR040750	eIF3 subunit M, C-terminal helix domain	PFAM	PF18005	eIF3m_C_helix	coord: 363..391 e-value: 4.3E-12 score: 45.5
IPR027528	Eukaryotic translation initiation factor 3 subunit M	HAMAP	MF_03012	eIF3m	coord: 15..397 score: 22.112556
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 314..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05888-RA	Carg05888-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0003743	translation initiation factor activity