Carg05865 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAGAGAAGGGAACGTTGGCCTTGAGAGAGAAAGAGTGGGGGCAAATCATTTTGTACGAAAAAGGTGGGAAAAGGCATTTTTATGGAGAATCTTCCATGGAACTACGCACAGCATTGATCGGTAATCCATTCTCGCTTGCAATCCAACAATGGATATTCAATTTTATATACATCCTCTTTCAATTCCCCTTTTCTTTCTAGACCGGAAGACATTCTTGTAAGCTAAGCAATCGCAGCCCAATTGCCACCGTGTTCCGTCTCCTTACCGTTGCTTTCTTTTCCCGGCGGTGCTGGTGGGTCGGGGGTATTTTCGAGGGAGGTCCGACCAAGCCTCTGCCTGATCGCTTCACCGTCATCTCAATCCTCCCTTCGATTCTTTTAACTCTTCCAAAGCTGGTGGGTATATGTAATTTGTTGCTTATCATCTTTTAATTTCTTCGTTTTCGAGGCTTTTGTTATGTATTTCTCGATCATATCCGGAAACCCTAGTTTTTCGTCTTTTGCTTGCGATTCCCTTTTGCCCCCTTCTGTGTCTTGATTTTCGTCCTTCTTTTGATTTCTTTTGTTTTCTGATCGATGATGCTTGTCTCAATTTTAGATGTTTTTCGCTTGTATAATCATCCCTATTTCGCCTTTGTTCGACTCGAAAAATTATGATTACTCTGCCGCGTCATTTGTTGTGGACCCTTTGGGTTGCTCCATGGCTATGTTCGTCTATTACATTTTTGCAGCTCTATCGAGGGACGTTGATTTGGTAACATACATGCTTGGGAACTTGATTCTTCCTGTTCAGTTTAAACATTTCAGTGACCACTTTTCATTCTTCCTGGATTACCTTTGTTTGAAGCAAAATGAAATTTGCATTACGAAATAATCAAATTCTATCATGTTTGTTTGCCATATTATGGACAATATTTTTTGTGAATCAGAATAGAAACGCTGCTATTTGTACGTAAGATTATAGGCTAGGATGAAATGTTAGAGAAAAAATTTGGATGGAAGTCATCACTTCAGAGATGGGTTAACTGACATGTTGAATCTCGTGAGATGCTTATATACCCTGAATTATGATTTTGTTAATTGCTGCTTATGCTCTGTCTTTACAAATAATAGACTCGAGGTTGTCGATCAACATGCACAAATCAATTGAAGAACTAGGTAAAAATGAAATTAGCAGGAATGAAGCATGTGAGAACAATGAATATGCAAGGCTAGTCATAGCTAATGAAGCAGGTCCTTTGGAATCAGAGATTCTACAGCCTCAAGATAAACTGAAAAGCAAATCACCCTTGAAGCGGTGGATCAAAATTTCACTATGGTGCATTGTTAGTATTGTATTTCTTCTTGTTTTCTTCAAGTGGGGAGTGCCATTTCTTTTTGAGAAGGTAATTCCCATTAATTACATCACCATTTTTTCTGTTTATAAGCTATCTTTCAGCTGAACTGTAGAAAATTTAACCTGTCCCTGTTATTTATTTTGAGAACTTTTTATTTTCTTTTTCATTTCTGCTGCTCATAGTACAGATATGCTTGCAAACCTATGCAACTAACTTCGTTTTAACAATGAGTTTGAATGTGGAATAATCATATCTGCAACTTTTTTTCTTCTGTTAAATTTCTTTATAATATTCGTATCTGCAAATCTTAATGTTGGTTCGTGATAAGGGCATTCTTACTGGAAAAAGAAAGTAATTAGTAAATGTTTGCATCAGCTGTAAAGCATCAAAGCATCTTAGAGAATGCGAGTTTGGGGAGTGGGAGGATGAGGTTTTCCTCCTCCCTTCCATGTTTCTTTGTTCTACAAAATCTTTCCTTTCTATAAAGGAATCTGATACTACATAAATGTTGATACGAATCATTTTAATTTTAATAAAAAAGTAACCAAGAGTGTAGTAAAATCTGCATATAGTGCATTGCTAAAGAGGATTTTGTGGTTTGTGTTCTTTTAGTATTGTTTGTAGGCACAAAATTAATATGCTTTGAAATGGGACATCATCTTGATTATTGTCTGTATTATTGGGAGAACTTCAGTACTTGTTCTACAGTGGTCTCTAGAGCTTTAACTATGCTGATTGCAAATGCATGACCAAAATTATGTGATAAGGCAAAAAATTTGATGCAGAGAAGCAGTGATGAGCCGAGTGGTATCTTATTGTGAATTACGAATAAACCTACCGAATAATATTGTTCATTTGTCAATTAGAATACACATGACCTTTTTATGGTATTTTTAGTGTGTTTTGCTTTAAAAGTGTTCTATCGAATCTCTCACTCTCCGACGTCTGTACTTCCTATGATTTATTTGACCTCTATTTTTGCTCCCTGAGTTCATTTCAGGTCATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTCGTCGACCTATGCTTGCACTAATGCTTATTGCTTCTCTGGCATCCTTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCTGGGATGATTTTTGGCTATGGCCTTGGGTTTGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTAATTTTCCGTGACCGCATTCATGTAAGACCTCTATGTTTTTTTTTCTTCAAATTATCGTGGCGGATAACTGGACCTATACTTTACAATCTTTCATTTGGTTCTCTGATCTCTGTATATTCATTATTGTGCAGCTATGGTTAATGAGATGGCCTCGAAAAGCAGAAGTACTCAGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTCAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTGGTAACAAGTATGAGATTTTGGCCCTATTTGTGCGGGTCCGTTGCAGGAATGATACCAGAGGCTTTCATTTACATTTACAGGTTTCTTTCTTAGTCCCTCGAACGGCTTATCGAAAAGAAAAGTTAATATGCTGGTGTGCATGAATATATAGAAAATAGGCCATTTTTTTTAGATTTACATGAATACTTTCAGGAATTGTGTTTCTGTCGCTTCATATGAAACTAGAACATGTCTTAATTTTCTTAGATCATTCATATGAAACAGGAAGAATCTCTATCGAGATAACGATAATGATGGGGTGCATTTTATGGTTAATTCATAGATATTGCTATAACTGGAGTTCTTTAGATGGTAATGTAAGCTATCTCTAGATGGGACGTTCCGATTATTCAAGAAAACGAGAACTGTAAACAATATTAACGTTTATCTAGTATTAATTCCTACTGCCATAATGCTTGTGTGGATGTAACCTTGTTTTGCATAATCTGATATTTCCTTTCCCTAGACTTCTTTGCACTTGTTAACGTCCGCTAAACATATCAGCTTTACTTATATGCAGTGGTAGGCTAATGAGGACACTAGCAGATGTTCAATATGGAAAACATCGGCTGACGACTGTAGAGATTGTGTATAACGTCATCTCCTTCATCATCGCGATCGTCACTATTATTATTTTCACTGTTTATGCAAAAAAGATGCTGAACAACCTTCAAATGGAAGAAGATAATAGAAAGTATTCTGCCTCCCACCATGGTAGTTTCGAGGTAGAGAGTCTTTCGCACGAAAGGTACAAGTAGTTTGGTTTACTATCTAGATTGCCATTAGTGTAGGTTAGTTCCTGTAAAATTAATAATTAACCCAGACCATTCTGAATACACCACTGAATTAAGTTGTTCTTTAATGATTTTCAGGTTTACTTTATAAAAAAAAAAAAAAAATTGTGTTGATTTCTAAAGTAGTTCGAAAAATACGATAGCTGTTGGCTGGTCTGGAAATTGTGTGTTGATGATCATTTCTTCAGGGGGGGGGGGGGGGGGGGGGGGCTTTCATTAGACCTTAGAGGAACTCAAGTTTTCTCTATAATGAACAAGAAACAGAATAGCGTTCTTTGTAAAGAGGTATAGAATCACCATGTGTTCGAACTTACTAATTGTTACTACTGCACGGAGAATCTCATAAGTGAGATAAAAGTAAAACTTACAGGGTTCTAGACCTACTGTTGATATTGAGTTCGGTTGAGAAATTAGCGAAAGGAGTTGCAATATTATCGTAAGTCTGTTCGTAATATGAAGCGTTGGCATCCCTGGGGTATGCAGATCTCCAATCAATGTGATGAAGGAAGATAGAGCTGTAGAAGAAGTCGTAGCTGAGATTACCCACACAATAAAGAGTTGCTGGAATACTTGA ATGTGGAGAGAAGGGAACGTTGGCCTTGAGAGAGAAAGAGTGGGGGCAAATCATTTTACCGGAAGACATTCTTGTAAGCTAAGCAATCGCAGCCCAATTGCCACCGTGTTCCGTCTCCTTACCGTTGCTTTCTTTTCCCGGCGGTGCTGGTGGGTCGGGGGTATTTTCGAGGGAGGTCCGACCAAGCCTCTGCCTGATCGCTTCACCGTCATCTCAATCCTCCCTTCGATTCTTTTAACTCTTCCAAAGCTGATGTTTTTCGCTTGTATAATCATCCCTATTTCGCCTTTGTTCGACTCGAAAAATTATGATTACTCTGCCGCGTCATTTGTTGTGGACCCTTTGGGTTGCTCCATGGCTATGTTCGTCTATTACATTTTTGCAGCTCTATCGAGGGACGTTGATTTGGTAACATACATGCTTGGGAACTTGATTCTTCCTGTTCAGTTTAAACATTTCAACTCGAGGTTGTCGATCAACATGCACAAATCAATTGAAGAACTAGGTAAAAATGAAATTAGCAGGAATGAAGCATGTGAGAACAATGAATATGCAAGGCTAGTCATAGCTAATGAAGCAGGTCCTTTGGAATCAGAGATTCTACAGCCTCAAGATAAACTGAAAAGCAAATCACCCTTGAAGCGGTGGATCAAAATTTCACTATGGTGCATTGTTAGTATTGTATTTCTTCTTGTTTTCTTCAAGTGGGGAGTGCCATTTCTTTTTGAGAAGGTCATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTCGTCGACCTATGCTTGCACTAATGCTTATTGCTTCTCTGGCATCCTTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCTGGGATGATTTTTGGCTATGGCCTTGGGTTTGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTAATTTTCCGTGACCGCATTCATCTATGGTTAATGAGATGGCCTCGAAAAGCAGAAGTACTCAGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTCAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTGGTAACAAGTATGAGATTTTGGCCCTATTTGTGCGGGTCCGTTGCAGGAATGATACCAGAGGCTTTCATTTACATTTACAGTGGTAGGCTAATGAGGACACTAGCAGATGTTCAATATGGAAAACATCGGCTGACGACTGTAGAGATTGTGTATAACGTCATCTCCTTCATCATCGCGATCGTCACTATTATTATTTTCACTGTTTATGCAAAAAAGATGCTGAACAACCTTCAAATGGAAGAAGATAATAGAAAGTATTCTGCCTCCCACCATGGTAGTTTCGAGGTAGAGAGTCTTTCGCACGAAAGATCTCCAATCAATGTGATGAAGGAAGATAGAGCTGTAGAAGAAGTCGTAGCTGAGATTACCCACACAATAAAGAGTTGCTGGAATACTTGA ATGTGGAGAGAAGGGAACGTTGGCCTTGAGAGAGAAAGAGTGGGGGCAAATCATTTTACCGGAAGACATTCTTGTAAGCTAAGCAATCGCAGCCCAATTGCCACCGTGTTCCGTCTCCTTACCGTTGCTTTCTTTTCCCGGCGGTGCTGGTGGGTCGGGGGTATTTTCGAGGGAGGTCCGACCAAGCCTCTGCCTGATCGCTTCACCGTCATCTCAATCCTCCCTTCGATTCTTTTAACTCTTCCAAAGCTGATGTTTTTCGCTTGTATAATCATCCCTATTTCGCCTTTGTTCGACTCGAAAAATTATGATTACTCTGCCGCGTCATTTGTTGTGGACCCTTTGGGTTGCTCCATGGCTATGTTCGTCTATTACATTTTTGCAGCTCTATCGAGGGACGTTGATTTGGTAACATACATGCTTGGGAACTTGATTCTTCCTGTTCAGTTTAAACATTTCAACTCGAGGTTGTCGATCAACATGCACAAATCAATTGAAGAACTAGGTAAAAATGAAATTAGCAGGAATGAAGCATGTGAGAACAATGAATATGCAAGGCTAGTCATAGCTAATGAAGCAGGTCCTTTGGAATCAGAGATTCTACAGCCTCAAGATAAACTGAAAAGCAAATCACCCTTGAAGCGGTGGATCAAAATTTCACTATGGTGCATTGTTAGTATTGTATTTCTTCTTGTTTTCTTCAAGTGGGGAGTGCCATTTCTTTTTGAGAAGGTCATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTCGTCGACCTATGCTTGCACTAATGCTTATTGCTTCTCTGGCATCCTTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCTGGGATGATTTTTGGCTATGGCCTTGGGTTTGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTAATTTTCCGTGACCGCATTCATCTATGGTTAATGAGATGGCCTCGAAAAGCAGAAGTACTCAGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTCAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTGGTAACAAGTATGAGATTTTGGCCCTATTTGTGCGGGTCCGTTGCAGGAATGATACCAGAGGCTTTCATTTACATTTACAGTGGTAGGCTAATGAGGACACTAGCAGATGTTCAATATGGAAAACATCGGCTGACGACTGTAGAGATTGTGTATAACGTCATCTCCTTCATCATCGCGATCGTCACTATTATTATTTTCACTGTTTATGCAAAAAAGATGCTGAACAACCTTCAAATGGAAGAAGATAATAGAAAGTATTCTGCCTCCCACCATGGTAGTTTCGAGGTAGAGAGTCTTTCGCACGAAAGATCTCCAATCAATGTGATGAAGGAAGATAGAGCTGTAGAAGAAGTCGTAGCTGAGATTACCCACACAATAAAGAGTTGCTGGAATACTTGA MWREGNVGLERERVGANHFTGRHSCKLSNRSPIATVFRLLTVAFFSRRCWWVGGIFEGGPTKPLPDRFTVISILPSILLTLPKLMFFACIIIPISPLFDSKNYDYSAASFVVDPLGCSMAMFVYYIFAALSRDVDLVTYMLGNLILPVQFKHFNSRLSINMHKSIEELGKNEISRNEACENNEYARLVIANEAGPLESEILQPQDKLKSKSPLKRWIKISLWCIVSIVFLLVFFKWGVPFLFEKVIIPIMKWEATAFRRPMLALMLIASLASFPVFFIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLIFRDRIHLWLMRWPRKAEVLRLAGEGSWFRQFQVVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMIPEAFIYIYSGRLMRTLADVQYGKHRLTTVEIVYNVISFIIAIVTIIIFTVYAKKMLNNLQMEEDNRKYSASHHGSFEVESLSHERSPINVMKEDRAVEEVVAEITHTIKSCWNT Homology
BLAST of Carg05865 vs. NCBI nr
Match: KAG7015431.1 (hypothetical protein SDJN02_23067, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 986.9 bits (2550), Expect = 6.5e-284 Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
BLAST of Carg05865 vs. NCBI nr
Match: XP_023552045.1 (uncharacterized protein LOC111809841 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 676.8 bits (1745), Expect = 1.4e-190 Identity = 383/507 (75.54%), Postives = 394/507 (77.71%), Query Frame = 0
BLAST of Carg05865 vs. NCBI nr
Match: KAG6577343.1 (hypothetical protein SDJN03_24917, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 664.8 bits (1714), Expect = 5.7e-187 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
BLAST of Carg05865 vs. NCBI nr
Match: XP_022929310.1 (uncharacterized protein LOC111435932 isoform X1 [Cucurbita moschata] >XP_022929311.1 uncharacterized protein LOC111435932 isoform X1 [Cucurbita moschata]) HSP 1 Score: 662.1 bits (1707), Expect = 3.7e-186 Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0
BLAST of Carg05865 vs. NCBI nr
Match: XP_023552048.1 (uncharacterized protein LOC111809841 isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 657.9 bits (1696), Expect = 6.9e-185 Identity = 337/341 (98.83%), Postives = 340/341 (99.71%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy Swiss-Prot
Match: Q55909 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0305 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 4.0e-10 Identity = 54/185 (29.19%), Postives = 94/185 (50.81%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy Swiss-Prot
Match: Q6YI46 (Transmembrane protein 64 OS=Homo sapiens OX=9606 GN=TMEM64 PE=2 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 1.8e-05 Identity = 40/142 (28.17%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy Swiss-Prot
Match: Q3U145 (Transmembrane protein 64 OS=Mus musculus OX=10090 GN=Tmem64 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 6.7e-05 Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy TrEMBL
Match: A0A6J1EMS5 (uncharacterized protein LOC111435932 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435932 PE=4 SV=1) HSP 1 Score: 662.1 bits (1707), Expect = 1.8e-186 Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy TrEMBL
Match: A0A6J1JA06 (uncharacterized protein LOC111482628 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482628 PE=4 SV=1) HSP 1 Score: 648.3 bits (1671), Expect = 2.7e-182 Identity = 334/341 (97.95%), Postives = 338/341 (99.12%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy TrEMBL
Match: A0A6J1EMG0 (uncharacterized protein LOC111435932 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435932 PE=4 SV=1) HSP 1 Score: 604.4 bits (1557), Expect = 4.4e-169 Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy TrEMBL
Match: A0A6J1J4T0 (uncharacterized protein LOC111482628 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482628 PE=4 SV=1) HSP 1 Score: 594.0 bits (1530), Expect = 6.0e-166 Identity = 306/312 (98.08%), Postives = 310/312 (99.36%), Query Frame = 0
BLAST of Carg05865 vs. ExPASy TrEMBL
Match: A0A6J1J880 (uncharacterized protein LOC111482628 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482628 PE=4 SV=1) HSP 1 Score: 594.0 bits (1530), Expect = 6.0e-166 Identity = 306/312 (98.08%), Postives = 310/312 (99.36%), Query Frame = 0
BLAST of Carg05865 vs. TAIR 10
Match: AT2G02370.1 (SNARE associated Golgi protein family ) HSP 1 Score: 384.4 bits (986), Expect = 1.4e-106 Identity = 205/321 (63.86%), Postives = 244/321 (76.01%), Query Frame = 0
BLAST of Carg05865 vs. TAIR 10
Match: AT2G02370.2 (SNARE associated Golgi protein family ) HSP 1 Score: 384.4 bits (986), Expect = 1.4e-106 Identity = 205/321 (63.86%), Postives = 244/321 (76.01%), Query Frame = 0
BLAST of Carg05865 vs. TAIR 10
Match: AT1G12450.1 (SNARE associated Golgi protein family ) HSP 1 Score: 223.4 bits (568), Expect = 4.1e-58 Identity = 117/276 (42.39%), Postives = 175/276 (63.41%), Query Frame = 0
BLAST of Carg05865 vs. TAIR 10
Match: AT4G22850.1 (SNARE associated Golgi protein family ) HSP 1 Score: 208.8 bits (530), Expect = 1.0e-53 Identity = 110/273 (40.29%), Postives = 170/273 (62.27%), Query Frame = 0
BLAST of Carg05865 vs. TAIR 10
Match: AT4G12000.1 (SNARE associated Golgi protein family ) HSP 1 Score: 201.4 bits (511), Expect = 1.7e-51 Identity = 99/237 (41.77%), Postives = 153/237 (64.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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