Carg05832 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05832
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein FBW2-like
Location	Carg_Chr16: 4704347 .. 4707085 (-)
RNA-Seq Expression	Carg05832
Synteny	Carg05832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATCTGTTTTAGGAGTAAGAAATTCTGTTTGTTCTGTTTTTCTTTTTCGATCTCGTTTGGTGATAGCTGATTTTAGCTATCTCTTCGGATTTCTCGTCAACCTCTCCCGGATTTTAATACCCTAACCAATTTTATTTTCAAATTTGTCTCTGATTGGCTGTTTACTCTAATTTTGGGCTTCTGAATCTTTATTTTTTATTATTATTATTATTTTTTTTTCGAATTGAACTGAGAATTTTATCCGTAGATCCGGACTTGATGATTTTTGGGACAGAAATGCTTAATTTACAGGGTTTTCCCCCAGCGGTTGGGAATAATTGACATCGGCTATTGGAAACTGACCTCTATTTGCTTCAACTTTTTCATCGATTGCTTTATAATTACATTAAGGAACAGTTAACATGATGCTTAGTTTCGATGTTTTTTCTTCTTGTTGCTTTTGTATGACACAATTTTTGTTTTGTTTTTCATCTTTGTAAAGGAAAGGTAGTAATATTTGATGGAGGATTGTGATAATCGGCACTGGGATGAGCTATTCCCTGATGCACTGGGTCTTATATTTAGGAATTTGTCACTACAAGAGATACTTGTTGTAATCCCAAGGGTTTGCAAATCATGGAGAAAAACAGTGTTGGGGCCTTACTGCTGGCAGGAGATAGACATTTTGGATTGGAGCTTACTTCGAGATCCCGATACCATCAATCGAATGCTTCAAATGTTGATTTCAAGAAGATCGGGTTCCCTTTGCAAGCTCTGCGTTAGCTGCCTTCCTAATGACTCTTGTTTGTCCCTGATTGCAGAACAGTGAGTTCAATAAGAACCCCCTGTTATTGTCTTCTTCTTTAATGCACTGTTGTTTCAGTTGCTCCTGTTTGTTGAAATTTTCCTCCCTCTTTGAAGATCATAATTATATTGTTTGGTCAAATGAGTGCTAAAACTATGATTATCTCTGTTTCCCGAAGGAGTTAGGCGAAGGATTTAGGCATCTTGTAACAGCTCAAGTCCACCGCTAGCCGATATTGTCCTCTATGGGCTTTCCCTTTTGGCTTTCCCTTCTGGCTTTCCCTCAAGGTTTTTAAAATGCAAACGTGTTTGCTAGGGAGAGGTTTTCACACCCTTATAAAGGGTGTTTCATTTTCCTCCCCAATCGATGTAATCCTACCCCATTCGAGGTCGAGCGTCCTCGCTGGCACTCATTCATTTTTCCAATCGATGTGGGACCCCCACCAAATTCACCCCTTTGGGGCCAATGTCTTTGCTGGCACATTGCCTCATGTCCACTCCCTTTGGGGCTCAGCCTCCTCGCTGGCACATCACCCGGTGTCTGGCTTTGATACCATTCGTAACAACCCATTGTCCTCTTTAGGCTTTCCCTTCTTCTCAAGGTTTTTAAAATGTGTCTAGGGAGAGGTTTCACACCCCTATTAAGGGTGTTTCGTTCTCTTTCCCAACCGATGTGGGATCTCACACATCTTGGTCTAAGTGTTGTGGTGTGCTGTGCAATTGAATGGTCAAGTTTGGCAGAAAAGTGTTCTATGGTTAGATGAGGAAAAAAAGAAAAAATAGAAACATTCCTTTTCTAAGTTTGGAGTTTCAACCTGGAGGATCAGAGGATCTTAAATCTCTAAGTTAGAGAATATGTACGAAATTGTGTCCAATACCTCATACGCTTGAATATGCCGATTGTCTATACATTAATATCTAACATTCCTGATTGACAGTGGAACAGCTCTGCATACATTACGGCTACCAAGAAGTGAAATAACGAATTCCATTGTAGAACAGGTTGCTGAGAGGTTTTCTGCTGTAACTTTTTTGGATTTAAGCTTTTGTAAAAACATTGGAGCATCGGCTCTCGAGGCGATTGGGAAACATTGTGCGAACCTCACAGGGTTGCGCAGAGTTATGTGCCCATTTGAAGCCCTTGACAAGTCTTCTCAAGATGATGAGGCCCTTGCAGTTGCATCGACAATGCATAAGCTCAAGCACCTTGAGATTGCCTATTTGCTTATCAACACTGAATCGGTTCTAAGAATCCTCGAGAACTGCCCAGATCTTGAGTATTTAGATGTGCAAGGGTGTTGGAATGTGATACCAGATGAGACGTTCAAAAAGTTTTCGAGGGTGAAATTGGTCGGTCCATTGGAAGAAATCTCAGAGTCGAACAGATGGGATGATTTTGATTGCTCAAATTACTCAAGTTCTTCTGGCTACTTGGCGTGGGATTTTGTGGCTGATGAATTAGATGATGAATTTGAAATGCTGGAGTTTTTTGGAGAAGATTATAGAAGTGTGGATGATATGGACCATGCTTATTCTGATTCATCTGCGGGGTCTCCTTGAATGTTGCTCCTACGCCTGGCTTTGAAATGGTGAACCTTTTGTTTCACTTAACCAAACAATAGAGCCCTTGAAATTGGGTTAGCTTTATGGTTGGTTAAACTATGATCGTATGAATACTTTTAGCCTTGTTAGTAACTCTGTAGATTAGACATGGCGTCCATTGAAGTCAGTAAGAGATATCCAAATGCAGGTACAAAAAGCAGCACCATTGAAGTTGACCCGAGTTGCCTGACCATCGACTTGGTTCGGGCTGATCGAAATTGATGGCTTCCATTGCAGCTGGTAATGTTGTCCGGTTGGTTTGTGGGAATATGTCTCTAGGTTTGTGAATGTATGGCAATGATGTTTTCTAACCTTGTTGAGGGTGAAATTATCTTCTTACCAATAGGTTAGAA

mRNA sequence

CAATCTGTTTTAGGAGTAAGAAATTCTGTTTGTTCTGTTTTTCTTTTTCGATCTCGTTTGGTGATAGCTGATTTTAGCTATCTCTTCGGATTTCTCGTCAACCTCTCCCGGATTTTAATACCCTAACCAATTTTATTTTCAAATTTGTCTCTGATTGGCTGTTTACTCTAATTTTGGGCTTCTGAATCTTTATTTTTTATTATTATTATTATTTTTTTTTCGAATTGAACTGAGAATTTTATCCGTAGATCCGGACTTGATGATTTTTGGGACAGAAATGCTTAATTTACAGGGTTTTCCCCCAGCGGTTGGGAATAATTGACATCGGCTATTGGAAACTGACCTCTATTTGCTTCAACTTTTTCATCGATTGCTTTATAATTACATTAAGGAACAGTTAACATGATGCTTAGTTTCGATGTTTTTTCTTCTTGTTGCTTTTGTATGACACAATTTTTGTTTTGTTTTTCATCTTTGTAAAGGAAAGGTAGTAATATTTGATGGAGGATTGTGATAATCGGCACTGGGATGAGCTATTCCCTGATGCACTGGGTCTTATATTTAGGAATTTGTCACTACAAGAGATACTTGTTGTAATCCCAAGGGTTTGCAAATCATGGAGAAAAACAGTGTTGGGGCCTTACTGCTGGCAGGAGATAGACATTTTGGATTGGAGCTTACTTCGAGATCCCGATACCATCAATCGAATGCTTCAAATGTTGATTTCAAGAAGATCGGGTTCCCTTTGCAAGCTCTGCGTTAGCTGCCTTCCTAATGACTCTTGTTTGTCCCTGATTGCAGAACATGGAACAGCTCTGCATACATTACGGCTACCAAGAAGTGAAATAACGAATTCCATTGTAGAACAGGTTGCTGAGAGGTTTTCTGCTGTAACTTTTTTGGATTTAAGCTTTTGTAAAAACATTGGAGCATCGGCTCTCGAGGCGATTGGGAAACATTGTGCGAACCTCACAGGGTTGCGCAGAGTTATGTGCCCATTTGAAGCCCTTGACAAGTCTTCTCAAGATGATGAGGCCCTTGCAGTTGCATCGACAATGCATAAGCTCAAGCACCTTGAGATTGCCTATTTGCTTATCAACACTGAATCGGTTCTAAGAATCCTCGAGAACTGCCCAGATCTTGAGTATTTAGATGTGCAAGGGTGTTGGAATGTGATACCAGATGAGACGTTCAAAAAGTTTTCGAGGGTGAAATTGGTCGGTCCATTGGAAGAAATCTCAGAGTCGAACAGATGGGATGATTTTGATTGCTCAAATTACTCAAGTTCTTCTGGCTACTTGGCGTGGGATTTTGTGGCTGATGAATTAGATGATGAATTTGAAATGCTGGAGTTTTTTGGAGAAGATTATAGAAGTGTGGATGATATGGACCATGCTTATTCTGATTCATCTGCGGGGTCTCCTTGAATGTTGCTCCTACGCCTGGCTTTGAAATGGTGAACCTTTTGTTTCACTTAACCAAACAATAGAGCCCTTGAAATTGGGTTAGCTTTATGGTTGGTTAAACTATGATCGTATGAATACTTTTAGCCTTGTTAGTAACTCTGTAGATTAGACATGGCGTCCATTGAAGTCAGTAAGAGATATCCAAATGCAGGTACAAAAAGCAGCACCATTGAAGTTGACCCGAGTTGCCTGACCATCGACTTGGTTCGGGCTGATCGAAATTGATGGCTTCCATTGCAGCTGGTAATGTTGTCCGGTTGGTTTGTGGGAATATGTCTCTAGGTTTGTGAATGTATGGCAATGATGTTTTCTAACCTTGTTGAGGGTGAAATTATCTTCTTACCAATAGGTTAGAA

Coding sequence (CDS)

ATGGAGGATTGTGATAATCGGCACTGGGATGAGCTATTCCCTGATGCACTGGGTCTTATATTTAGGAATTTGTCACTACAAGAGATACTTGTTGTAATCCCAAGGGTTTGCAAATCATGGAGAAAAACAGTGTTGGGGCCTTACTGCTGGCAGGAGATAGACATTTTGGATTGGAGCTTACTTCGAGATCCCGATACCATCAATCGAATGCTTCAAATGTTGATTTCAAGAAGATCGGGTTCCCTTTGCAAGCTCTGCGTTAGCTGCCTTCCTAATGACTCTTGTTTGTCCCTGATTGCAGAACATGGAACAGCTCTGCATACATTACGGCTACCAAGAAGTGAAATAACGAATTCCATTGTAGAACAGGTTGCTGAGAGGTTTTCTGCTGTAACTTTTTTGGATTTAAGCTTTTGTAAAAACATTGGAGCATCGGCTCTCGAGGCGATTGGGAAACATTGTGCGAACCTCACAGGGTTGCGCAGAGTTATGTGCCCATTTGAAGCCCTTGACAAGTCTTCTCAAGATGATGAGGCCCTTGCAGTTGCATCGACAATGCATAAGCTCAAGCACCTTGAGATTGCCTATTTGCTTATCAACACTGAATCGGTTCTAAGAATCCTCGAGAACTGCCCAGATCTTGAGTATTTAGATGTGCAAGGGTGTTGGAATGTGATACCAGATGAGACGTTCAAAAAGTTTTCGAGGGTGAAATTGGTCGGTCCATTGGAAGAAATCTCAGAGTCGAACAGATGGGATGATTTTGATTGCTCAAATTACTCAAGTTCTTCTGGCTACTTGGCGTGGGATTTTGTGGCTGATGAATTAGATGATGAATTTGAAATGCTGGAGTTTTTTGGAGAAGATTATAGAAGTGTGGATGATATGGACCATGCTTATTCTGATTCATCTGCGGGGTCTCCTTGA

Protein sequence

MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSLLRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSIVEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEALAVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLVGPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAYSDSSAGSP

Homology

[Close]

BLAST of Carg05832 vs. NCBI nr
Match: XP_022929357.1 (F-box protein FBW2-like [Cucurbita moschata] >XP_022929358.1 F-box protein FBW2-like [Cucurbita moschata] >XP_022929359.1 F-box protein FBW2-like [Cucurbita moschata] >KAG6577308.1 F-box protein FBW2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015398.1 F-box protein FBW2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 632.9 bits (1631), Expect = 1.5e-177
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300
           GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY
Sbjct: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300

Query: 301 SDSSAGSP 309
           SDSSAGSP
Sbjct: 301 SDSSAGSP 308

[Close]

BLAST of Carg05832 vs. NCBI nr
Match: XP_023553120.1 (F-box protein FBW2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 630.6 bits (1625), Expect = 7.3e-177
Identity = 306/308 (99.35%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLKHLEIAYLLINTESVL+ILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLKILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300
           GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFG+DYRSVDDMDHAY
Sbjct: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGDDYRSVDDMDHAY 300

Query: 301 SDSSAGSP 309
           SDSSAGSP
Sbjct: 301 SDSSAGSP 308

[Close]

BLAST of Carg05832 vs. NCBI nr
Match: XP_022984943.1 (F-box protein FBW2-like [Cucurbita maxima] >XP_022984944.1 F-box protein FBW2-like [Cucurbita maxima] >XP_022984945.1 F-box protein FBW2-like [Cucurbita maxima])

HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 306/308 (99.35%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDCDNRHWDEL PDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL
Sbjct: 1   MEDCDNRHWDELSPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLKHLEIAYLLINTESVLRILENCPDLE LDVQGCWNVIPDETFKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLELLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300
           GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY
Sbjct: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300

Query: 301 SDSSAGSP 309
           SDSSAGSP
Sbjct: 301 SDSSAGSP 308

[Close]

BLAST of Carg05832 vs. NCBI nr
Match: XP_038906234.1 (F-box protein FBW2-like [Benincasa hispida] >XP_038906235.1 F-box protein FBW2-like [Benincasa hispida])

HSP 1 Score: 524.6 bits (1350), Expect = 5.6e-145
Identity = 258/313 (82.43%), Postives = 280/313 (89.46%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDCD+R WDELFPDALGLIF+NLSLQEIL+VIPRVCKSWRKTVLGPYCWQEIDI+DWSL
Sbjct: 1   MEDCDSRRWDELFPDALGLIFKNLSLQEILLVIPRVCKSWRKTVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPD++N+MLQ+LISR SG L KLC+SCLPNDS LSLIAEHG ALHTLR+PRSEITNSI
Sbjct: 61  LRDPDSVNKMLQLLISRSSGYLSKLCISCLPNDSSLSLIAEHGKALHTLRVPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVAER SAVTFLDLSFCKNIGA ALEAIGKHCANLTGLRRVMCPFEA+D+SSQDDEAL
Sbjct: 121 VEQVAERLSAVTFLDLSFCKNIGAPALEAIGKHCANLTGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLK LEIAYLLINTESVL+ILENCP+LEYLDVQGCWNVI DE FKKFS+VKLV
Sbjct: 181 AVASTMHKLKQLEIAYLLINTESVLKILENCPELEYLDVQGCWNVILDEKFKKFSKVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHA- 300
           GPLEE SE+ RWD       S SSGYL WDFV DE+DD+F+MLEF+GEDYRSVDD +H+ 
Sbjct: 241 GPLEEFSETIRWD-----GCSDSSGYLTWDFVVDEIDDQFQMLEFWGEDYRSVDDEEHSF 300

Query: 301 ----YSDSSAGSP 309
               Y D   GSP
Sbjct: 301 EEHVYPDWLDGSP 308

[Close]

BLAST of Carg05832 vs. NCBI nr
Match: XP_022136779.1 (F-box protein FBW2-like [Momordica charantia] >XP_022136781.1 F-box protein FBW2-like [Momordica charantia] >XP_022136782.1 F-box protein FBW2-like [Momordica charantia] >XP_022136783.1 F-box protein FBW2-like [Momordica charantia] >XP_022136784.1 F-box protein FBW2-like [Momordica charantia] >XP_022136785.1 F-box protein FBW2-like [Momordica charantia] >XP_022136786.1 F-box protein FBW2-like [Momordica charantia])

HSP 1 Score: 509.2 bits (1310), Expect = 2.5e-140
Identity = 257/320 (80.31%), Postives = 275/320 (85.94%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           ME+ + R WDEL PDALGLIFRNLSLQEILV IPRVCKSWRKTVLGPYCWQEIDI+DWSL
Sbjct: 1   MENSEIRRWDELLPDALGLIFRNLSLQEILVDIPRVCKSWRKTVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPDT+NRMLQMLI+R SGSL KLCVS LPNDS LSLIAEHG  LH LRLPRSEITNSI
Sbjct: 61  LRDPDTVNRMLQMLITRNSGSLHKLCVSGLPNDSSLSLIAEHGKDLHNLRLPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVA+RFSAVTFLDLSFCK IGA ALEA GKHC NLTGL+RVMCPFEA+DKSSQDDEAL
Sbjct: 121 VEQVADRFSAVTFLDLSFCKTIGAPALEAFGKHCPNLTGLKRVMCPFEAIDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLKHLEIAYLLINTESVL+ILENCP+LEYLDV GCWNV+ DE FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLKILENCPELEYLDVLGCWNVVLDEKFKKFSRVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVD------ 300
           GPLEE SE+N WD   CSNYSSSSGY+ WDFVA +LDD+FEMLEFFG+DYRS D      
Sbjct: 241 GPLEEYSETNGWD--ACSNYSSSSGYI-WDFVAGDLDDQFEMLEFFGDDYRSADADDVGF 300

Query: 301 ------DMDHAYSDSSAGSP 309
                  ++H Y D   GSP
Sbjct: 301 YYDYDYGVEHGYPDWLGGSP 317

[Close]

BLAST of Carg05832 vs. ExPASy Swiss-Prot
Match: Q9ZPE4 (F-box protein FBW2 OS=Arabidopsis thaliana OX=3702 GN=FBW2 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.6e-76
Identity = 151/289 (52.25%), Postives = 194/289 (67.13%), Query Frame = 0


Query: 2   EDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWS-L 61
           EDC+ RHWDEL PDALGLIF +L LQE+L V+PRVCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 121
               D ++RML+MLI R +GSL KL V+ L NDS  S IA+H  +L TL++PRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 181
           V  VAE+ S++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETF--KKFSRVK 241
           A+A+TM KLK LEIAY  ++TE VL+IL  C  LE+L+++GCW+V  D  F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEF 286
           ++GP  +      N W+D     +S  S YLAW+F  D +  EF   EF
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF 291

[Close]

BLAST of Carg05832 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-24
Identity = 96/310 (30.97%), Postives = 152/310 (49.03%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           ME  ++ +W EL P+    I   L   EIL    +VC+SWR+    P  W++ID+ +   
Sbjct: 11  MEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD 70

Query: 61  LRDPD-TINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPR-SEIT- 120
           L D D  +  M +  + R  G L  + +        L+ IA   + L +LRL R S+IT 
Sbjct: 71  LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITD 130

Query: 121 NSIVEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDD 180
           +  VE V +    +  L+LS+C +    +L  +G+ C N+  L+    P     +   DD
Sbjct: 131 DGFVEAVVK--LPLEELELSYC-SFSVESLRVVGQCCLNMKTLKLNKHP-----QKENDD 190

Query: 181 EALAVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNV--IPDETFKKFS 240
           +ALA+A TM KL+HL++    ++   +  IL+NC +LE+LD++ C+NV  + D   + F 
Sbjct: 191 DALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFE 250

Query: 241 RVKLV-GPLE-----EISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFE-MLEFFG- 298
            VK+V  P +     +I  S   D +D S+    SG           DD+FE   +F G 
Sbjct: 251 SVKVVRHPNDSIHDIDIGSSEDEDPYDFSDIDLMSG-----------DDDFEGYYDFSGA 301

[Close]

BLAST of Carg05832 vs. ExPASy Swiss-Prot
Match: Q9FDX1 (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 78/257 (30.35%), Postives = 120/257 (46.69%), Query Frame = 0


Query: 5   DNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDW------ 64
           D   W  L P+ L  I   L++QE+      V KSW      PY W   D+  W      
Sbjct: 4   DGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPE 63

Query: 65  -SLLRDPD---TINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRS 124
            + L  P+    ++ ML+ ++    G L K+ V    +D  LS  A+    L  L +  S
Sbjct: 64  STHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSS 123

Query: 125 -EITNSIVEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVM--------- 184
             +T++ + ++A R  ++  LD+S+C  I    L  IG++C NL  L+R +         
Sbjct: 124 PNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIG 183

Query: 185 -CPFEALDKSSQ--DDEALAVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQG 239
             P E LD   Q  D EA A+   M  L+HLEI +  ++ + +  I E CP LEYLD+ G
Sbjct: 184 SVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFG 243

[Close]

BLAST of Carg05832 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 70/242 (28.93%), Postives = 117/242 (48.35%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWS- 60
           M+D   R+W EL       I   L   EIL    +VCK W +    P  W++IDI + + 
Sbjct: 173 MKDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRND 232

Query: 61  LLRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRS-EITN 120
                  +  M +  + R  G L ++ +     +  +  IA+  + L +L L R   IT+
Sbjct: 233 RAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITD 292

Query: 121 SIVEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDE 180
             V +   +   + +L++S+C   G S L  IG+ C NL  L+    P      S  DD 
Sbjct: 293 EGVAKAVSKVPLLEYLEVSYCLFSGES-LRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDN 352

Query: 181 ALAVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNV--IPDETFKKFSR 239
           A A+A +M +L+HL++    +  + +  IL+ CP LE+LD++ C+N+  + D   + F R
Sbjct: 353 AKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFER 412

[Close]

BLAST of Carg05832 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.2e-18
Identity = 75/254 (29.53%), Postives = 119/254 (46.85%), Query Frame = 0


Query: 8   HWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSLLRDPDTI 67
           +W EL PD L  I   LS  EIL    +VC+SWR+    P  W+ ID+ +   L     +
Sbjct: 26  NWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCIYAM 85

Query: 68  NRMLQMLISRRSGSLCKLCVS--CLPNDSCLSLIAEHGTALHTLRLPRSEITNSIVEQVA 127
               + ++    G L +  +        S L+ +AE  + L  LR+   +IT+  + +  
Sbjct: 86  EACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGGQITSVGIFEAI 145

Query: 128 ERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEALAVAST 187
            +   +  L+L +C +I     + IG+ C NL  L+ V   +  L++S  D++ALA+A T
Sbjct: 146 VKLPLLEELELLYC-SIEEEHFKTIGQACPNLKTLKLVGF-WSHLNES--DNDALAIADT 205

Query: 188 MHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLVGPLEE 247
           M  L HL++    +    +  IL+ CP LE LD++ C+N            + L G LE 
Sbjct: 206 MPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFN------------INLFGDLER 262

Query: 248 ISESNRWDDFDCSN 260
                R  DF C N
Sbjct: 266 -QCLERIKDFRCPN 262

[Close]

BLAST of Carg05832 vs. ExPASy TrEMBL
Match: A0A6J1EMK2 (F-box protein FBW2-like OS=Cucurbita moschata OX=3662 GN=LOC111435957 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 7.1e-178
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300
           GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY
Sbjct: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300

Query: 301 SDSSAGSP 309
           SDSSAGSP
Sbjct: 301 SDSSAGSP 308

[Close]

BLAST of Carg05832 vs. ExPASy TrEMBL
Match: A0A6J1JC23 (F-box protein FBW2-like OS=Cucurbita maxima OX=3661 GN=LOC111483063 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.1e-176
Identity = 306/308 (99.35%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDCDNRHWDEL PDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL
Sbjct: 1   MEDCDNRHWDELSPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLKHLEIAYLLINTESVLRILENCPDLE LDVQGCWNVIPDETFKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLELLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300
           GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY
Sbjct: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300

Query: 301 SDSSAGSP 309
           SDSSAGSP
Sbjct: 301 SDSSAGSP 308

[Close]

BLAST of Carg05832 vs. ExPASy TrEMBL
Match: A0A6J1C8I0 (F-box protein FBW2-like OS=Momordica charantia OX=3673 GN=LOC111008399 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140
Identity = 257/320 (80.31%), Postives = 275/320 (85.94%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           ME+ + R WDEL PDALGLIFRNLSLQEILV IPRVCKSWRKTVLGPYCWQEIDI+DWSL
Sbjct: 1   MENSEIRRWDELLPDALGLIFRNLSLQEILVDIPRVCKSWRKTVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDPDT+NRMLQMLI+R SGSL KLCVS LPNDS LSLIAEHG  LH LRLPRSEITNSI
Sbjct: 61  LRDPDTVNRMLQMLITRNSGSLHKLCVSGLPNDSSLSLIAEHGKDLHNLRLPRSEITNSI 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVA+RFSAVTFLDLSFCK IGA ALEA GKHC NLTGL+RVMCPFEA+DKSSQDDEAL
Sbjct: 121 VEQVADRFSAVTFLDLSFCKTIGAPALEAFGKHCPNLTGLKRVMCPFEAIDKSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           AVASTMHKLKHLEIAYLLINTESVL+ILENCP+LEYLDV GCWNV+ DE FKKFSRVKLV
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLKILENCPELEYLDVLGCWNVVLDEKFKKFSRVKLV 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVD------ 300
           GPLEE SE+N WD   CSNYSSSSGY+ WDFVA +LDD+FEMLEFFG+DYRS D      
Sbjct: 241 GPLEEYSETNGWD--ACSNYSSSSGYI-WDFVAGDLDDQFEMLEFFGDDYRSADADDVGF 300

Query: 301 ------DMDHAYSDSSAGSP 309
                  ++H Y D   GSP
Sbjct: 301 YYDYDYGVEHGYPDWLGGSP 317

[Close]

BLAST of Carg05832 vs. ExPASy TrEMBL
Match: A0A0A0L0J6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G096100 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136
Identity = 239/302 (79.14%), Postives = 266/302 (88.08%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDC +R WDELFPDALGLIF+NLSLQE+LVVIPRVCKSWR+TVLGPYCWQEIDI+DWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRDP ++  MLQ+LISR SG L KLC+S LPNDS LSLIA+HG ALHTLR+PRSEITNS 
Sbjct: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVA++ SAVTFLDLSFCKNIGA ALEAIGKHC NL GLRRVMCPFEA+D+SSQDDEA+
Sbjct: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           A+ASTMHK+K LEIAYLLINTESVL+ILENCP LEYLDVQGCW+VI DE FKKFS+VKL+
Sbjct: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300
           GPLEE SE+ RWD      YS SS YL W+FVADELDD+F+MLEF GEDY SVDD +H Y
Sbjct: 241 GPLEEFSETIRWD-----GYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVY 297

Query: 301 SD 303
            D
Sbjct: 301 PD 297

[Close]

BLAST of Carg05832 vs. ExPASy TrEMBL
Match: A0A1S4E0L3 (F-box protein FBW2-like OS=Cucumis melo OX=3656 GN=LOC103495755 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.8e-134
Identity = 238/302 (78.81%), Postives = 264/302 (87.42%), Query Frame = 0


Query: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60
           MEDC +R WDELFPDALGLIF+NLSLQEILVVIPRVCKSWR+TVLGPYCWQEIDI+DWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120
           LRD  ++N MLQ+LISR SG L KLC+S LPNDS LSLIA++G  LHTLR+PRSEITNS 
Sbjct: 61  LRDAVSVNTMLQLLISRSSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180
           VEQVA+R SAVTFLDLSFCKNIGA ALEAIGKHC NL GLRRVMCPFEA+D+SSQDDEAL
Sbjct: 121 VEQVADRLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240
           A+ASTM KLK LEIAYLL+NTESVL+ILENCP+LEYLDVQGCWNVI DE FKKFS+VKL+
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300
           GPLEE SE  RWD       S SS YL WDFVADELDD+F+MLEF GEDY SVDD ++A+
Sbjct: 241 GPLEEFSEMIRWD-----GCSDSSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAF 297

Query: 301 SD 303
            +
Sbjct: 301 EE 297

[Close]

BLAST of Carg05832 vs. TAIR 10
Match: AT4G08980.1 (F-BOX WITH WD-40 2 )

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77
Identity = 151/289 (52.25%), Postives = 194/289 (67.13%), Query Frame = 0


Query: 2   EDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWS-L 61
           EDC+ RHWDEL PDALGLIF +L LQE+L V+PRVCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 121
               D ++RML+MLI R +GSL KL V+ L NDS  S IA+H  +L TL++PRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 181
           V  VAE+ S++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETF--KKFSRVK 241
           A+A+TM KLK LEIAY  ++TE VL+IL  C  LE+L+++GCW+V  D  F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEF 286
           ++GP  +      N W+D     +S  S YLAW+F  D +  EF   EF
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF 291

[Close]

BLAST of Carg05832 vs. TAIR 10
Match: AT4G08980.3 (F-BOX WITH WD-40 2 )

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77
Identity = 151/289 (52.25%), Postives = 194/289 (67.13%), Query Frame = 0


Query: 2   EDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWS-L 61
           EDC+ RHWDEL PDALGLIF +L LQE+L V+PRVCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 121
               D ++RML+MLI R +GSL KL V+ L NDS  S IA+H  +L TL++PRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 181
           V  VAE+ S++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETF--KKFSRVK 241
           A+A+TM KLK LEIAY  ++TE VL+IL  C  LE+L+++GCW+V  D  F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEF 286
           ++GP  +      N W+D     +S  S YLAW+F  D +  EF   EF
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF 291

[Close]

BLAST of Carg05832 vs. TAIR 10
Match: AT4G08980.2 (F-BOX WITH WD-40 2 )

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77
Identity = 151/289 (52.25%), Postives = 194/289 (67.13%), Query Frame = 0


Query: 2   EDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWS-L 61
           EDC+ RHWDEL PDALGLIF +L LQE+L V+PRVCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 121
               D ++RML+MLI R +GSL KL V+ L NDS  S IA+H  +L TL++PRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 181
           V  VAE+ S++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETF--KKFSRVK 241
           A+A+TM KLK LEIAY  ++TE VL+IL  C  LE+L+++GCW+V  D  F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEF 286
           ++GP  +      N W+D     +S  S YLAW+F  D +  EF   EF
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF 291

[Close]

BLAST of Carg05832 vs. TAIR 10
Match: AT4G08980.4 (F-BOX WITH WD-40 2 )

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77
Identity = 151/289 (52.25%), Postives = 194/289 (67.13%), Query Frame = 0


Query: 2   EDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWS-L 61
           EDC+ RHWDEL PDALGLIF +L LQE+L V+PRVCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 121
               D ++RML+MLI R +GSL KL V+ L NDS  S IA+H  +L TL++PRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 181
           V  VAE+ S++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETF--KKFSRVK 241
           A+A+TM KLK LEIAY  ++TE VL+IL  C  LE+L+++GCW+V  D  F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEF 286
           ++GP  +      N W+D     +S  S YLAW+F  D +  EF   EF
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF 291

[Close]

BLAST of Carg05832 vs. TAIR 10
Match: AT4G08980.5 (F-BOX WITH WD-40 2 )

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77
Identity = 151/289 (52.25%), Postives = 194/289 (67.13%), Query Frame = 0


Query: 2   EDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWS-L 61
           EDC+ RHWDEL PDALGLIF +L LQE+L V+PRVCK+W + V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 121
               D ++RML+MLI R +GSL KL V+ L NDS  S IA+H  +L TL++PRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 181
           V  VAE+ S++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETF--KKFSRVK 241
           A+A+TM KLK LEIAY  ++TE VL+IL  C  LE+L+++GCW+V  D  F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LVGP--LEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEF 286
           ++GP  +      N W+D     +S  S YLAW+F  D +  EF   EF
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEF 291

The following BLAST results are available for this feature:

BLAST of Carg05832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929357.1	1.5e-177	100.00	F-box protein FBW2-like [Cucurbita moschata] >XP_022929358.1 F-box protein FBW2-...	[more]
XP_023553120.1	7.3e-177	99.35	F-box protein FBW2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984943.1	1.1e-175	99.35	F-box protein FBW2-like [Cucurbita maxima] >XP_022984944.1 F-box protein FBW2-li...	[more]
XP_038906234.1	5.6e-145	82.43	F-box protein FBW2-like [Benincasa hispida] >XP_038906235.1 F-box protein FBW2-l...	[more]
XP_022136779.1	2.5e-140	80.31	F-box protein FBW2-like [Momordica charantia] >XP_022136781.1 F-box protein FBW2...	[more]

BLAST of Carg05832 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPE4	2.6e-76	52.25	F-box protein FBW2 OS=Arabidopsis thaliana OX=3702 GN=FBW2 PE=1 SV=1	[more]
Q9M0U9	2.3e-24	30.97	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]
Q9FDX1	3.1e-21	30.35	F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1	[more]
Q9S9V9	2.0e-20	28.93	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
Q9M0U6	4.2e-18	29.53	Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE...	[more]

BLAST of Carg05832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMK2	7.1e-178	100.00	F-box protein FBW2-like OS=Cucurbita moschata OX=3662 GN=LOC111435957 PE=4 SV=1	[more]
A0A6J1JC23	5.1e-176	99.35	F-box protein FBW2-like OS=Cucurbita maxima OX=3661 GN=LOC111483063 PE=4 SV=1	[more]
A0A6J1C8I0	1.2e-140	80.31	F-box protein FBW2-like OS=Momordica charantia OX=3673 GN=LOC111008399 PE=4 SV=1	[more]
A0A0A0L0J6	2.3e-136	79.14	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G096100 PE=4 ...	[more]
A0A1S4E0L3	2.8e-134	78.81	F-box protein FBW2-like OS=Cucumis melo OX=3656 GN=LOC103495755 PE=4 SV=1	[more]

BLAST of Carg05832 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08980.1	1.8e-77	52.25	F-BOX WITH WD-40 2	[more]
AT4G08980.3	1.8e-77	52.25	F-BOX WITH WD-40 2	[more]
AT4G08980.2	1.8e-77	52.25	F-BOX WITH WD-40 2	[more]
AT4G08980.4	1.8e-77	52.25	F-BOX WITH WD-40 2	[more]
AT4G08980.5	1.8e-77	52.25	F-BOX WITH WD-40 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 2..256 e-value: 4.2E-29 score: 103.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 8..53 e-value: 1.1E-5 score: 25.1
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 5..284
None	No IPR available	PANTHER	PTHR16134:SF111	F-BOX PROTEIN FBW2	coord: 5..284
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 35..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05832-RA	Carg05832-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding