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Carg05815 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGTTTCTTTAGAAGCTTTGGCAATGGCTGGGATTGATTCTAATGAGTGGGCTATGGATGCTAAAGAATGGGAACGAGACGAAATGGTGAACGACGTTCCTCCACATTTATTAGTTGAAGAAGACAACGACAACGACGACGAAACCGCTATAAGTTTCTGGTCACTGAGTTGTAGCTTCTGCCATTCCAAAAAAAAAATCATAGAGATCAAAACTTTAAATTGCTTGAGCTTGAGGATCGAATGACTTTCCAATTTCAAGAGAGCCCTATGACAGTGGAATCAGTCGATAAAGGAAACCTTCGCATAAACAGAAAGAATTAGATCTCGAAAGAAGTTCGATACGTAACTTTTTAGTTCTTCAATTATAGCAACATTGAGTAAGATACAACAGTTCCAGTCCCACCGGTTTTCACTAGAGTGCCTTAAGTAG ATGTCGGTTTCTTTAGAAGCTTTGGCAATGGCTGGGATTGATTCTAATGAGTGGGCTATGGATGCTAAAGAATGGGAACGAGACGAAATGGTGAACGACGTTCCTCCACATTTATTAGTTGAAGAAGACAACGACAACGACGACGAAACCGCTATAACAACATTGAGTAAGATACAACAGTTCCAGTCCCACCGGTTTTCACTAGAGTGCCTTAAGTAG ATGTCGGTTTCTTTAGAAGCTTTGGCAATGGCTGGGATTGATTCTAATGAGTGGGCTATGGATGCTAAAGAATGGGAACGAGACGAAATGGTGAACGACGTTCCTCCACATTTATTAGTTGAAGAAGACAACGACAACGACGACGAAACCGCTATAACAACATTGAGTAAGATACAACAGTTCCAGTCCCACCGGTTTTCACTAGAGTGCCTTAAGTAG MSVSLEALAMAGIDSNEWAMDAKEWERDEMVNDVPPHLLVEEDNDNDDETAITTLSKIQQFQSHRFSLECLK Homology
BLAST of Carg05815 vs. NCBI nr
Match: KAG7015382.1 (hypothetical protein SDJN02_23017, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145.2 bits (365), Expect = 2.2e-31 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Carg05815 vs. NCBI nr
Match: KAG7015383.1 (hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12 Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 0
BLAST of Carg05815 vs. NCBI nr
Match: KAG6577295.1 (hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12 Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 0
BLAST of Carg05815 vs. NCBI nr
Match: XP_022943015.1 (uncharacterized protein LOC111447880 [Cucurbita moschata]) HSP 1 Score: 80.5 bits (197), Expect = 6.6e-12 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of Carg05815 vs. NCBI nr
Match: TYK16880.1 (Tetratricopeptide-like helical [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 1.6e-10 Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Carg05815 vs. ExPASy TrEMBL
Match: A0A6J1FX98 (uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC111447880 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.2e-12 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of Carg05815 vs. ExPASy TrEMBL
Match: A0A0A0KWE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.6e-11 Identity = 38/54 (70.37%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of Carg05815 vs. ExPASy TrEMBL
Match: A0A5D3CZU0 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00110 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.8e-11 Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Carg05815 vs. ExPASy TrEMBL
Match: A0A5A7TS68 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004640 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.8e-11 Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Carg05815 vs. ExPASy TrEMBL
Match: A0A0A0KU90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026820 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07 Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of Carg05815 vs. TAIR 10
Match: AT2G22320.1 (unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 4.9e-05 Identity = 25/55 (45.45%), Postives = 32/55 (58.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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