Carg05813 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05813
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tubulin-folding cofactor C
Location	Carg_Chr16: 4620399 .. 4623423 (+)
RNA-Seq Expression	Carg05813
Synteny	Carg05813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGACGATGGAGCTTCATCGATCCCTAATTCCATCCCTCCACATCCTTCAGACTCGAGCCTCCAGAAGAAGCACGCTTCAGTTATTGAACGTCTCGCCAATCGCAATCAGACTCGCTTAGAGAACTCCATAACCCGCAGATCGGAGTCGGATTCCTCTTCCTCTTCCACATCCTCGTTTCTCGTCCGCTTTTCTGACTCCAAGCGCGCCATCGAGTCCGACCTCGCCCAATGCCGCCTCACTCCGCCGGAGCCCTCTCAAGTCAGATCTCACCTCGACGGGATTTCCGCCTCAATCTCCGACCTCGAAAAGCTCGTTGCCGAAACCTCTTACTCCTTGCCTTCGTATGAGGTACGAGCTTCACTCAAATCGATTTCGGAGTTGAAGCAAAGCCTCGAGGATTTAAATTCCGAGTTGCTACCTAAAAAGAAATTCTCATTCAAGAACAAAGGCACGAAGAAAGATACTAAGTCGGAATCTAAAGACCTAGGGCTTGGAAATGCCGGTTCTATGTTAACGAACAAGCAGCAGCAACCGAGTTACATCGCTCGAGATTCTCCAGGAATCAGAGACAAGGATGGCGAGGTTCTGGTAAAAAATTTCAAGGGATCGGATGTTGGGGAGTTTACCATCTCGGGTCTTAGTTCATGCGAGGTCAAATTGATTGGTAGCGTTAGGGCGTTATTTATTCATAAACTAAGAAACTGCAAAGTTTATACGGGACCTGTAATGGGTTCAATTCTAATCGATGATGTTGAGGGGTGTACATTTGCAATGGCTTCCCATCAAATTCGGATTCACAATGCGAAGAACAGTGATTTCTATCTTAGAGTCAGGAGTAGACCGATCATTGAAGATAGCAGCAGCGTTCGATTCGCGCCATACTGTGTGAGTTACGAAGGGATTGAGGAAGATCTCAAAGATGCGAGCCTCGGCGAGGAGACAGGAAACTGGGAGAATGTAGATGATTTTCGTTGGTTGCGAGCGGTGCAGTCGCCGAACTGGTCGATTCTGGCGGAGGGTGAGCGAATTGACACCGTCAAAATCTCATCTACAGAGGGTTGAGCTCTTAAGAGTTAAGTTTCTCATCTCTACTTGTGATAAAAAGTTTATTTGAAAGTTTTGTTCGTTTATCATAGAGAAATTTAATCAGATGACATCGGTTGATTTTGCTGTGCGTGTGTTGTGTTAGTATTATATCCAAAACTGGGAATTCTAGCAGATTCTTTCCTTTACAATTGGTTGATTTTTAAGAAATCTTTCTTGGTCTTGCTGTTTTTCTGCCTTTGAGTGACTTGCCATTGCCACTTGACAACTTGGTTTTTCATATCATTAGAATTTTTAGTTGTATGAATGAAAAATTATCTTGAGGGAATATGATGTGCAGGCTCTCTCTCCCTCGGGGTATGTGCTAGAATCTCGTAGTTAGTTAGTTTGTGTAACACTTTAAGCTCATTGCTAGTAGATATTGTTCTCTTTAGACTTCCCTTTATGGACTTCCCCTCAAGATTTTTAAAATACCTAAGAATAGGTTTTCACACCCTTATAATGGATGCTTCGTTTCCTTCTCCAACCAATGTGGGATCTCACATTCTACCGTCTTGGGGGCTAGCGTCCTCGTTGGCACACTACCTAATGTCTGGCTCTGATACCATTCGTAACAGCCCAAGCCCACAGCTAATAGATACTATCCTCTTTGGGCTTTCCCTTCCGGACTTCTCCTCAAGGTTTCTAAAATGCGTTTGATAGGGAGAGGTTTCCATACCCTTATAAGGAATGTTTCGTTCCCCTCTCCACTCGACGTGGGATCTCACAGTTAGTCCCAAATTTGGATAGATTATGTGTAAAAAGTATTGGAAAGAGTTCAAAGGGTGATCATTTGCACATCTATCGTAAGAGGACACAAGCATTGAGTCGTACTGCAATCTAATGAAAGCTTAAGGTAAAAAATGATTTGGCAATTACATCGAACAAAATAGATGTCATGATTTTTTCTTGAATTCAAACCTAGAATTACATTTTTTTTTTTTTACAGGATTGTCTCGTAGAAGATTGAACCTACCATTGGTTAGAAGAGGCTTTGATGTACCAAAGTGAGCATAGCTCAGGTTAGAGATTCAAATCTCCATACTCCACTTCTTAAACTTAAAAACAAAGAAGAAATATTGATGTTTAGTCATTTGTGTTACTCTTTGGTTAGTAAGTAGATTTGCACGTGGAATAAATTACATTAATAGTAGTACAGTATAAGATAAGAGCTCGGATCGGGAAAGCTGGTTAGAAAACGAGTGAATTAGTGTAGTAATTGACAGCCTTCTAATGTTAAAGTTTGTACTCTGAATGTGCTAGCTCAAGTTTGGTACTAGTTTACATACGGAAGAACACAAACAACATATTTTTAGTGGATTAGAAAAACCATTGTTCTTTCTAGTTGATATCGGATTAGCTTCAAACATTTCGTTTGAAAATTTCTTCAGAAAGTTGGTAAAATTAATTCGATCATTAACAAAATTGTTCTTCCCCTTAGCTTGACCTTATATAGAGAGTATCTATGCAACCCAACATCTTTCTGAACTGAGTTGTTTTGCATTTGAACTGGGAGATGCCTCATCTTTTTGTGTCGTGAAATGAAAGTCGAGCTATGTCCCATGCAGATTTAGTGCGCTCGAGTTTCTGATTGGTGACTTCAGCGAGCGGTCGATTAAATTATACACAATACTCCAAAACTTTGGAATATGCTTCAATCGTATCCTTAAACTTTGAACAAGTTTAATTTTTCCATCTAATTTGAATCACTTCTAAAATATCAACTTTTAAATTGATACGAATAATAGTCTCTTTTTGTGTAAGGATTAGAATATTTATGTGGTATTATCTTGAATCAATGGTCATTACTATTTATTTAATCTAAAAAAACGTTATCAAATTCATGTAAAACTAAAACTTTTGGAAGTTTAGGGCGCTAATATTTGGTTTTTTTTTTTTTTTTTAATTTTCTTGTTCTTTTAACATTTAAATT

mRNA sequence

ATGGCGGACGACGATGGAGCTTCATCGATCCCTAATTCCATCCCTCCACATCCTTCAGACTCGAGCCTCCAGAAGAAGCACGCTTCAGTTATTGAACGTCTCGCCAATCGCAATCAGACTCGCTTAGAGAACTCCATAACCCGCAGATCGGAGTCGGATTCCTCTTCCTCTTCCACATCCTCGTTTCTCGTCCGCTTTTCTGACTCCAAGCGCGCCATCGAGTCCGACCTCGCCCAATGCCGCCTCACTCCGCCGGAGCCCTCTCAAGTCAGATCTCACCTCGACGGGATTTCCGCCTCAATCTCCGACCTCGAAAAGCTCGTTGCCGAAACCTCTTACTCCTTGCCTTCGTATGAGGTACGAGCTTCACTCAAATCGATTTCGGAGTTGAAGCAAAGCCTCGAGGATTTAAATTCCGAGTTGCTACCTAAAAAGAAATTCTCATTCAAGAACAAAGGCACGAAGAAAGATACTAAGTCGGAATCTAAAGACCTAGGGCTTGGAAATGCCGGTTCTATGTTAACGAACAAGCAGCAGCAACCGAGTTACATCGCTCGAGATTCTCCAGGAATCAGAGACAAGGATGGCGAGGTTCTGGTAAAAAATTTCAAGGGATCGGATGTTGGGGAGTTTACCATCTCGGGTCTTAGTTCATGCGAGGTCAAATTGATTGGTAGCGTTAGGGCGTTATTTATTCATAAACTAAGAAACTGCAAAGTTTATACGGGACCTGTAATGGGTTCAATTCTAATCGATGATGTTGAGGGGTGTACATTTGCAATGGCTTCCCATCAAATTCGGATTCACAATGCGAAGAACAGTGATTTCTATCTTAGAGTCAGGAGTAGACCGATCATTGAAGATAGCAGCAGCGTTCGATTCGCGCCATACTGTGTGAGTTACGAAGGGATTGAGGAAGATCTCAAAGATGCGAGCCTCGGCGAGGAGACAGGAAACTGGGAGAATGTAGATGATTTTCGTTGGTTGCGAGCGGTGCAGTCGCCGAACTGGTCGATTCTGGCGGAGGGTGAGCGAATTGACACCGTCAAAATCTCATCTACAGAGGGATTGTCTCGTAGAAGATTGAACCTACCATTGGTTAGAAGAGGCTTTGATGTACCAAAGTGAGCATAGCTCAGGTTAGAGATTCAAATCTCCATACTCCACTTCTTAAACTTAAAAACAAAGAAGAAATATTGATGTTTAGTCATTTGTGTTACTCTTTGGTTAGTAAGTAGATTTGCACGTGGAATAAATTACATTAATAGTAGTACAGTATAAGATAAGAGCTCGGATCGGGAAAGCTGGTTAGAAAACGAGTGAATTAGTGTAGTAATTGACAGCCTTCTAATGTTAAAGTTTGTACTCTGAATGTGCTAGCTCAAGTTTGGTACTAGTTTACATACGGAAGAACACAAACAACATATTTTTAGTGGATTAGAAAAACCATTGTTCTTTCTAGTTGATATCGGATTAGCTTCAAACATTTCGTTTGAAAATTTCTTCAGAAAGTTGGTAAAATTAATTCGATCATTAACAAAATTGTTCTTCCCCTTAGCTTGACCTTATATAGAGAGTATCTATGCAACCCAACATCTTTCTGAACTGAGTTGTTTTGCATTTGAACTGGGAGATGCCTCATCTTTTTGTGTCGTGAAATGAAAGTCGAGCTATGTCCCATGCAGATTTAGTGCGCTCGAGTTTCTGATTGGTGACTTCAGCGAGCGGTCGATTAAATTATACACAATACTCCAAAACTTTGGAATATGCTTCAATCGTATCCTTAAACTTTGAACAAGTTTAATTTTTCCATCTAATTTGAATCACTTCTAAAATATCAACTTTTAAATTGATACGAATAATAGTCTCTTTTTGTGTAAGGATTAGAATATTTATGTGGTATTATCTTGAATCAATGGTCATTACTATTTATTTAATCTAAAAAAACGTTATCAAATTCATGTAAAACTAAAACTTTTGGAAGTTTAGGGCGCTAATATTTGGTTTTTTTTTTTTTTTTTAATTTTCTTGTTCTTTTAACATTTAAATT

Coding sequence (CDS)

ATGGCGGACGACGATGGAGCTTCATCGATCCCTAATTCCATCCCTCCACATCCTTCAGACTCGAGCCTCCAGAAGAAGCACGCTTCAGTTATTGAACGTCTCGCCAATCGCAATCAGACTCGCTTAGAGAACTCCATAACCCGCAGATCGGAGTCGGATTCCTCTTCCTCTTCCACATCCTCGTTTCTCGTCCGCTTTTCTGACTCCAAGCGCGCCATCGAGTCCGACCTCGCCCAATGCCGCCTCACTCCGCCGGAGCCCTCTCAAGTCAGATCTCACCTCGACGGGATTTCCGCCTCAATCTCCGACCTCGAAAAGCTCGTTGCCGAAACCTCTTACTCCTTGCCTTCGTATGAGGTACGAGCTTCACTCAAATCGATTTCGGAGTTGAAGCAAAGCCTCGAGGATTTAAATTCCGAGTTGCTACCTAAAAAGAAATTCTCATTCAAGAACAAAGGCACGAAGAAAGATACTAAGTCGGAATCTAAAGACCTAGGGCTTGGAAATGCCGGTTCTATGTTAACGAACAAGCAGCAGCAACCGAGTTACATCGCTCGAGATTCTCCAGGAATCAGAGACAAGGATGGCGAGGTTCTGGTAAAAAATTTCAAGGGATCGGATGTTGGGGAGTTTACCATCTCGGGTCTTAGTTCATGCGAGGTCAAATTGATTGGTAGCGTTAGGGCGTTATTTATTCATAAACTAAGAAACTGCAAAGTTTATACGGGACCTGTAATGGGTTCAATTCTAATCGATGATGTTGAGGGGTGTACATTTGCAATGGCTTCCCATCAAATTCGGATTCACAATGCGAAGAACAGTGATTTCTATCTTAGAGTCAGGAGTAGACCGATCATTGAAGATAGCAGCAGCGTTCGATTCGCGCCATACTGTGTGAGTTACGAAGGGATTGAGGAAGATCTCAAAGATGCGAGCCTCGGCGAGGAGACAGGAAACTGGGAGAATGTAGATGATTTTCGTTGGTTGCGAGCGGTGCAGTCGCCGAACTGGTCGATTCTGGCGGAGGGTGAGCGAATTGACACCGTCAAAATCTCATCTACAGAGGGATTGTCTCGTAGAAGATTGAACCTACCATTGGTTAGAAGAGGCTTTGATGTACCAAAGTGA

Protein sequence

MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTSSFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEVRASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQPSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVSYEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEGLSRRRLNLPLVRRGFDVPK

Homology

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BLAST of Carg05813 vs. NCBI nr
Match: KAG7015380.1 (Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 721.1 bits (1860), Expect = 5.0e-204
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEGLSRR 360
           YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEGLSRR
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEGLSRR 360

Query: 361 RLNLPLVRRGFDVPK 376
           RLNLPLVRRGFDVPK
Sbjct: 361 RLNLPLVRRGFDVPK 375

[Close]

BLAST of Carg05813 vs. NCBI nr
Match: KAG6577293.1 (Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 683.7 bits (1763), Expect = 8.8e-193
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 356

[Close]

BLAST of Carg05813 vs. NCBI nr
Match: XP_022929266.1 (tubulin-folding cofactor C [Cucurbita moschata])

HSP 1 Score: 678.7 bits (1750), Expect = 2.8e-191
Identity = 354/356 (99.44%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDDGASSIPNSIPPHPSDSSL KKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLHKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 356

[Close]

BLAST of Carg05813 vs. NCBI nr
Match: XP_023553493.1 (tubulin-folding cofactor C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 673.7 bits (1737), Expect = 9.2e-190
Identity = 352/356 (98.88%), Postives = 352/356 (98.88%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDLKDASLGEETGNWENVDDFRWLRAV SPNWSILA  ERIDTVKISSTEG
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVHSPNWSILAADERIDTVKISSTEG 356

[Close]

BLAST of Carg05813 vs. NCBI nr
Match: XP_022984301.1 (tubulin-folding cofactor C [Cucurbita maxima])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 347/356 (97.47%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSES SSSSST+
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESGSSSSSTT 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYFLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SYIARDSPGIRDKDGEVLVKNFKGSDVGEF++SGLSSCEVKLIGS+RALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFSLSGLSSCEVKLIGSIRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAE ERIDTVKISST G
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKISSTAG 356

[Close]

BLAST of Carg05813 vs. ExPASy Swiss-Prot
Match: Q9SMR2 (Tubulin-folding cofactor C OS=Arabidopsis thaliana OX=3702 GN=TFCC PE=1 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.3e-103
Identity = 208/352 (59.09%), Postives = 261/352 (74.15%), Query Frame = 0


Query: 3   DDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTSSF 62
           +DDG SS+  ++ P     +LQKKH  ++ERL+ R+Q R  +S    S S S+  STSSF
Sbjct: 2   EDDGQSSVAETLDP-----ALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSF 61

Query: 63  LVRFSDSKRAIESDLAQCRL--TPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 122
           L +FSDSKR+IES +A+ RL  +  + S+++S L  IS +I +LEKL+AE SY LPSYEV
Sbjct: 62  LAKFSDSKRSIESRIAESRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEV 121

Query: 123 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 182
           R+SLK +S+LKQSL+ L+ EL+PKKKFSFK+K T K  K ESK   +     +L  K   
Sbjct: 122 RSSLKIVSDLKQSLDILSGELVPKKKFSFKSKSTTK--KPESKLPEIQKPDVVLPPKLVP 181

Query: 183 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 242
                RDSPG+R+K GE LVK+F+GS +GEFT+S L SC+VKL G+V ALF+H+L+ C V
Sbjct: 182 ----VRDSPGLRNKHGETLVKSFEGSSIGEFTLSDLDSCQVKLTGTVNALFLHRLKKCSV 241

Query: 243 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 302
           YTGPV+GSILIDDVE C   +ASHQIRIH A+ SDFYLRVRSRPIIEDS+ VRFAPYC+ 
Sbjct: 242 YTGPVIGSILIDDVEDCVLVLASHQIRIHCARKSDFYLRVRSRPIIEDSNGVRFAPYCLD 301

Query: 303 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKIS 353
           Y+GI+EDLK A L EET NW NVDDFRWLRAVQSPNWS+L E ER+  + IS
Sbjct: 302 YKGIDEDLKTAGLEEETNNWANVDDFRWLRAVQSPNWSLLPEEERVSLLTIS 342

[Close]

BLAST of Carg05813 vs. ExPASy Swiss-Prot
Match: Q8VCN9 (Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.4e-37
Identity = 114/348 (32.76%), Postives = 180/348 (51.72%), Query Frame = 0


Query: 5   DGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTR---LENSITRRSESDSSSSSTSS 64
           D + ++ ++    P D SL      V ERL  R Q R   +E    +R + +     +  
Sbjct: 5   DCSMALADAAAGSPRDLSL------VPERLQRREQERQIEVERRKQKRQDQEVEEEKSGF 64

Query: 65  FLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEVR 124
           F   F+  + A+E       L   E S  R  L+  +  +  L KL+ ++   L +Y++R
Sbjct: 65  FAAAFARERAAVE------ELLRGEASAER--LEEAANRLQGLRKLLNDSVLFLAAYDLR 124

Query: 125 ASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESK-DLG--LGNAGSMLTNKQ 184
               ++++L+  L +   EL PKK+F+FK +  KKD    ++ D       A S    K+
Sbjct: 125 QGQAALAQLQAVLTERRQELQPKKRFAFKAR--KKDAAGTAQVDAAPVTSAAPSPPVTKE 184

Query: 185 QQPSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNC 244
           ++ +  A  + G  + + + L K  +     +  +S L++C VKL G+   L + K R C
Sbjct: 185 EEGAPGASWACGFSNLESQDLEKRAEELHQRDVLLSDLTNCTVKLCGNPNTLRLAKARGC 244

Query: 245 KVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYC 304
           KV  GPV  S+ ++D   C  A+A  Q+R+H  K++  +L+V SR I+ED S ++FAPY 
Sbjct: 245 KVLCGPVTTSVFLEDCRDCVLAVACQQLRVHTTKDTRVFLQVTSRAIVEDCSGIQFAPYT 304

Query: 305 VSYEGIEEDLKDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEGER 346
            SY GI++D +D+ L     NW+ VDDF WL R V SPNWSIL E ER
Sbjct: 305 WSYPGIDKDFQDSGLDRSKNNWDQVDDFNWLARNVASPNWSILPEEER 336

[Close]

BLAST of Carg05813 vs. ExPASy Swiss-Prot
Match: Q5R5J7 (Tubulin-specific chaperone C OS=Pongo abelii OX=9601 GN=TBCC PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-36
Identity = 104/345 (30.14%), Postives = 175/345 (50.72%), Query Frame = 0


Query: 12  NSIPPHPSDSSLQKKHASVIERLANRNQTR---LENSITRRSESDSSSSSTSSFLVRFSD 71
           ++ P    D   Q+  + V ERL  R Q R   +E    +R   +    ++  F   F+ 
Sbjct: 7   SAAPVRSGDMESQRDMSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFAATFAR 66

Query: 72  SKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEVRASLKSIS 131
            + A+E  L        E ++    L+  ++ +  L+KL+ ++ + L +Y++R   ++++
Sbjct: 67  ERAAVEELL--------ERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALA 126

Query: 132 ELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQPSYIARDS 191
            L+ +L +   EL PKK+F+FK +G  KD  S +K          + + Q  P     + 
Sbjct: 127 RLQAALAERRRELQPKKRFAFKTRG--KDAASCTKVDAAPGIPPAVESIQDSPLPKKAEG 186

Query: 192 P-------GIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVY 251
                   G  + + +VL K        +  ++ LS+C V+L G+   L + K  +CK+ 
Sbjct: 187 DLGSSWLCGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLL 246

Query: 252 TGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVSY 311
            GPV  S+ ++D   C  A+A  Q+RIH+ K++  +L+V SR I+ED S ++FAPY  SY
Sbjct: 247 CGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSY 306

Query: 312 EGIEEDLKDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEGER 346
             I++D + + L     NW +VDDF WL R + SPNW IL E ER
Sbjct: 307 PEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWCILPEEER 341

[Close]

BLAST of Carg05813 vs. ExPASy Swiss-Prot
Match: Q15814 (Tubulin-specific chaperone C OS=Homo sapiens OX=9606 GN=TBCC PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-36
Identity = 108/341 (31.67%), Postives = 177/341 (51.91%), Query Frame = 0


Query: 20  DSSLQKKHASVIERLANRNQTR---LENSITRRSESDSSSSSTSSFLVRFSDSKRAIESD 79
           D   Q+  + V ERL  R Q R   +E    +R   +    ++  F+  F   + A+E  
Sbjct: 15  DMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATFVRERAAVEEL 74

Query: 80  LAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEVRASLKSISELKQSLED 139
           L        E ++    L+  ++ +  L+KL+ ++ + L +Y++R   ++++ L+ +L +
Sbjct: 75  L--------ERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALARLQAALAE 134

Query: 140 LNSELLPKKKFSFKNKGTKKDTKSESK-DLGLG-------NAGSMLTNKQQ---QPSYIA 199
               L PKK+F+FK +G  KD  S +K D   G          S L  K +    PS++ 
Sbjct: 135 RRRGLQPKKRFAFKTRG--KDAASSTKVDAAPGIPPAVESIQDSPLPKKAEGDLGPSWVC 194

Query: 200 RDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPV 259
               G  + + +VL K        +  ++ LS+C V+L G+   L + K  +CK+  GPV
Sbjct: 195 ----GFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPV 254

Query: 260 MGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVSYEGIE 319
             S+ ++D   C  A+A  Q+RIH+ K++  +L+V SR I+ED S ++FAPY  SY  I+
Sbjct: 255 STSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEID 314

Query: 320 EDLKDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEGER 346
           +D + + L     NW +VDDF WL R + SPNWSIL E ER
Sbjct: 315 KDFESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEER 341

[Close]

BLAST of Carg05813 vs. ExPASy Swiss-Prot
Match: Q3SZE9 (Tubulin-specific chaperone C OS=Bos taurus OX=9913 GN=TBCC PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.5e-35
Identity = 100/336 (29.76%), Postives = 174/336 (51.79%), Query Frame = 0


Query: 20  DSSLQKKHASVIERLANR---NQTRLENSITRRSESDSSSSSTSSFLVRFSDSKRAIESD 79
           D   Q++   V ERL  R    Q  +E    +R + +     +  F   F+  + A+E  
Sbjct: 15  DLGSQRERTLVPERLQKREHERQLEVERRKQKRQDQEVEEEKSDFFAAAFARERSAVEEL 74

Query: 80  LAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEVRASLKSISELKQSLED 139
           L        E  +    L+  +A +  L+KL+ ++   L +Y++R + + ++ L+ +L  
Sbjct: 75  L--------ESGESVERLEEAAARLQGLQKLINDSVLFLAAYDLRQAQEVLARLQAALAK 134

Query: 140 LNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNA----GSMLTNK--QQQPSYIARDSPG 199
              EL PKK+F+FK +  KKD  S ++     +A    GS+ +    +++  + +    G
Sbjct: 135 RRQELQPKKRFAFKTR--KKDAASATQVASAPDAPAAEGSLTSPPPLKEEGDFDSSWICG 194

Query: 200 IRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSIL 259
             +   +VL K  +     +  ++ L +C +KL G+   L + K + C +  GPV  S+ 
Sbjct: 195 FSNLQSQVLEKRAEELHQQDVLLTQLRNCTIKLYGNPNTLRLTKAQGCTLLCGPVSTSVF 254

Query: 260 IDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVSYEGIEEDLKD 319
           ++D   C  A+A  Q+R+H  K++  +L+V SR I+ED + ++FAPY  SY GI++D + 
Sbjct: 255 LEDCSDCVLAVACQQLRVHTTKDTRIFLQVTSRAIMEDCTGIQFAPYTWSYPGIDKDFEG 314

Query: 320 ASLGEETGNWENVDDFRWL-RAVQSPNWSILAEGER 346
           + L +   NW +VDDF WL R V SPNW++L E ER
Sbjct: 315 SGLDKNKNNWNDVDDFNWLARDVASPNWNVLPEEER 340

[Close]

BLAST of Carg05813 vs. ExPASy TrEMBL
Match: A0A6J1EMN1 (Tubulin-folding cofactor C OS=Cucurbita moschata OX=3662 GN=LOC111435895 PE=3 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.4e-191
Identity = 354/356 (99.44%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDDGASSIPNSIPPHPSDSSL KKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLHKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 356

[Close]

BLAST of Carg05813 vs. ExPASy TrEMBL
Match: A0A6J1J4V8 (Tubulin-folding cofactor C OS=Cucurbita maxima OX=3661 GN=LOC111482642 PE=3 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 5.4e-188
Identity = 347/356 (97.47%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSES SSSSST+
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESGSSSSSTT 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYFLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SYIARDSPGIRDKDGEVLVKNFKGSDVGEF++SGLSSCEVKLIGS+RALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFSLSGLSSCEVKLIGSIRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAE ERIDTVKISST G
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKISSTAG 356

[Close]

BLAST of Carg05813 vs. ExPASy TrEMBL
Match: A0A5D3D2T6 (Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00100 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.6e-171
Identity = 321/356 (90.17%), Postives = 335/356 (94.10%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MAD DGASSIPNSIP  PSD++LQKKHASVIERLA RNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIES LAQCRLTPP+P+Q+RSHLDGIS SISDLEKLVAE+SYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQ+L++LNSELLPKKKFSFKNK TKKD KSESKD GLGNA SMLTNKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SY ARDSPGIRDKDGE+LVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVE CTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDL DASLG ETGNWENVDDF WLRAV SPNWSIL E ERIDT+KIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of Carg05813 vs. ExPASy TrEMBL
Match: A0A1S3BX62 (Tubulin-folding cofactor C OS=Cucumis melo OX=3656 GN=LOC103494429 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.6e-171
Identity = 321/356 (90.17%), Postives = 335/356 (94.10%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MAD DGASSIPNSIP  PSD++LQKKHASVIERLA RNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIES LAQCRLTPP+P+Q+RSHLDGIS SISDLEKLVAE+SYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQ+L++LNSELLPKKKFSFKNK TKKD KSESKD GLGNA SMLTNKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SY ARDSPGIRDKDGE+LVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDVE CTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDL DASLG ETGNWENVDDF WLRAV SPNWSIL E ERIDT+KIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of Carg05813 vs. ExPASy TrEMBL
Match: A0A5A7TP94 (Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004650 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.0e-170
Identity = 320/356 (89.89%), Postives = 335/356 (94.10%), Query Frame = 0


Query: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MAD DGASSIPNSIP  PSD++LQKKHASVIERLA RNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120
           SFLVRFSDSKRAIES LAQCRLTPP+P+Q+RSHLDGIS SISDLEKLVAE+SYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180
           RASLKSISELKQ+L++LNSELLPKKKFSFKNK TKKD KSESKD GLGNA SMLTNKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SY ARDSPGIRDKDGE+LVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300
           YTGPVMGSILIDDV+ CTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVQECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 357
           YEGIEEDL DASLG ETGNWENVDDF WLRAV SPNWSIL E ERIDT+KIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of Carg05813 vs. TAIR 10
Match: AT4G39920.1 (C-CAP/cofactor C-like domain-containing protein )

HSP 1 Score: 377.1 bits (967), Expect = 1.7e-104
Identity = 208/352 (59.09%), Postives = 261/352 (74.15%), Query Frame = 0


Query: 3   DDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTSSF 62
           +DDG SS+  ++ P     +LQKKH  ++ERL+ R+Q R  +S    S S S+  STSSF
Sbjct: 2   EDDGQSSVAETLDP-----ALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSF 61

Query: 63  LVRFSDSKRAIESDLAQCRL--TPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 122
           L +FSDSKR+IES +A+ RL  +  + S+++S L  IS +I +LEKL+AE SY LPSYEV
Sbjct: 62  LAKFSDSKRSIESRIAESRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEV 121

Query: 123 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 182
           R+SLK +S+LKQSL+ L+ EL+PKKKFSFK+K T K  K ESK   +     +L  K   
Sbjct: 122 RSSLKIVSDLKQSLDILSGELVPKKKFSFKSKSTTK--KPESKLPEIQKPDVVLPPKLVP 181

Query: 183 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 242
                RDSPG+R+K GE LVK+F+GS +GEFT+S L SC+VKL G+V ALF+H+L+ C V
Sbjct: 182 ----VRDSPGLRNKHGETLVKSFEGSSIGEFTLSDLDSCQVKLTGTVNALFLHRLKKCSV 241

Query: 243 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 302
           YTGPV+GSILIDDVE C   +ASHQIRIH A+ SDFYLRVRSRPIIEDS+ VRFAPYC+ 
Sbjct: 242 YTGPVIGSILIDDVEDCVLVLASHQIRIHCARKSDFYLRVRSRPIIEDSNGVRFAPYCLD 301

Query: 303 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKIS 353
           Y+GI+EDLK A L EET NW NVDDFRWLRAVQSPNWS+L E ER+  + IS
Sbjct: 302 YKGIDEDLKTAGLEEETNNWANVDDFRWLRAVQSPNWSLLPEEERVSLLTIS 342

The following BLAST results are available for this feature:

BLAST of Carg05813 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015380.1	5.0e-204	100.00	Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6577293.1	8.8e-193	100.00	Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022929266.1	2.8e-191	99.44	tubulin-folding cofactor C [Cucurbita moschata]	[more]
XP_023553493.1	9.2e-190	98.88	tubulin-folding cofactor C [Cucurbita pepo subsp. pepo]	[more]
XP_022984301.1	1.1e-187	97.47	tubulin-folding cofactor C [Cucurbita maxima]	[more]

BLAST of Carg05813 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMR2	2.3e-103	59.09	Tubulin-folding cofactor C OS=Arabidopsis thaliana OX=3702 GN=TFCC PE=1 SV=1	[more]
Q8VCN9	6.4e-37	32.76	Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1	[more]
Q5R5J7	1.9e-36	30.14	Tubulin-specific chaperone C OS=Pongo abelii OX=9601 GN=TBCC PE=2 SV=1	[more]
Q15814	2.4e-36	31.67	Tubulin-specific chaperone C OS=Homo sapiens OX=9606 GN=TBCC PE=1 SV=2	[more]
Q3SZE9	3.5e-35	29.76	Tubulin-specific chaperone C OS=Bos taurus OX=9913 GN=TBCC PE=2 SV=1	[more]

BLAST of Carg05813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMN1	1.4e-191	99.44	Tubulin-folding cofactor C OS=Cucurbita moschata OX=3662 GN=LOC111435895 PE=3 SV...	[more]
A0A6J1J4V8	5.4e-188	97.47	Tubulin-folding cofactor C OS=Cucurbita maxima OX=3661 GN=LOC111482642 PE=3 SV=1	[more]
A0A5D3D2T6	4.6e-171	90.17	Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BX62	4.6e-171	90.17	Tubulin-folding cofactor C OS=Cucumis melo OX=3656 GN=LOC103494429 PE=3 SV=1	[more]
A0A5A7TP94	1.0e-170	89.89	Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Carg05813 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39920.1	1.7e-104	59.09	C-CAP/cofactor C-like domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
IPR006599	CARP motif	SMART	SM00673	carp	coord: 254..288 e-value: 3.1E-4 score: 30.1 coord: 216..253 e-value: 3.8E-6 score: 36.4
IPR016098	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	GENE3D	2.160.20.70		coord: 190..366 e-value: 2.9E-56 score: 191.7
IPR031925	Tubulin-specific chaperone C, N-terminal	PFAM	PF16752	TBCC_N	coord: 32..145 e-value: 1.2E-28 score: 99.8
IPR012945	Tubulin binding cofactor C-like domain	PFAM	PF07986	TBCC	coord: 210..326 e-value: 1.2E-39 score: 134.8
IPR038397	TBCC, N-terminal domain superfamily	GENE3D	1.20.58.1250		coord: 24..145 e-value: 4.0E-23 score: 83.7
IPR027684	Tubulin-specific chaperone C	PANTHER	PTHR15139	TUBULIN FOLDING COFACTOR C	coord: 22..353
IPR017901	C-CAP/cofactor C-like domain	PROSITE	PS51329	C_CAP_COFACTOR_C	coord: 177..328 score: 36.046749

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05813-RA	Carg05813-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0007023	post-chaperonin tubulin folding pathway
biological_process	GO:0007021	tubulin complex assembly
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0015631	tubulin binding