Carg05795 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCATCGTTCTGTCAGTGGGAAGGCCAATGCGAATGCGTTGGATTTGTGCTCTTTTACAGCTTTAAACTACACTCTCTAAACGTTAATTCATTCCCACACCTTCGTTCCCACCGTCTTTCAGAGCTTCCTCTCATCCCCAACAATGGCGGCCACTTCCACTTCTCTCTTCTCCTTCACCCATACTCAATGCCCGGACAAACCCAGATCCCTTCTTCGTCCCACACCCTTTGTTTCCCTCTTCAGATCTGCTTCCCTCTCTTTTCCCTCCAATTCGCTTCCCACTTTCCGCTGTTCTCTCAATACCGCCGTCCACGACGCACCCATTGAAGAAAAGTTAGATGTTCCCATCGAAAAGAGTAAGCCTCTCCATCCAATTTCAAATCGTGGAGGGTTTTTGTTGTTGTTCTTCTTCTCTTTGTAGCTGATTTGATTTGATTCTGTGCTCAGAGTTTCCATCTTTTCCCACTGTGATGGATATCAATGAAATTCGTAATATCTTGCCCCACAGGTATTTGTTAAATTGTTCCTCTGTTTGGGGTTTTGGAGATTCTTGGATTTTATTCTTATACATATTGTGATTTTTTTTTCTTTTGCTTAAGGTTCCCGTTTCTTTTAGTAGATAGAGTGATCGAATACAATCCTGGGGTTTCCGCTGTTGCTATTAAGAATGTTACCATCAATGATAACTTCTTTCCAGGCCACTTCCCTGATAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGTATCTTCTTAACCTTCAAATTATTCAACTGCTTACTATCTATTCAAAATGAACTCTCGATGAATTCATGAATTTATGAACTCTTCTCATGCTTGATGTAAGTTCTAAACCACTTCAAATGGATTATGTAAAATCTGCAAGTTGTGTAGATGAGCTATGATAGTGCAACTAGTACTGACTTCTAAGCTCTTGATTGATCCCAAAGCGATGGACTGAATCATAAGATGAATGTGAGTTATCACCTTGGTTGAAGAGGAAAACGAAGCATTCCTTATAAGAGTGTGGAAACCTCTTCTTTTTAAACATGTTTTAAAATCTTGAGGGAAACCCGAAAAGAAAAACCCAAAGAGGACAAATGGTATCATAGCCAGACACCAAACGGTGTGCTAGCGAGGATGCTAGGCCTCCATAGGGGATGGATTGTGAGATCCCACGTTAGTTGAAGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTTCCTTGTAAACGCGTTTTAAAATCTTTGAAGGGAAAGCTGAAAGAGGACAATATCTACTAGCGGTGGACTTGAGCTGTACACGATATTAACTGTCCATGACTGCAAAGATAGAATGAGAAAGAACCTTCTTTAGTCTTTTAGAAAGAACTCTAGCCACAGGAAAGAGCTGAGGCTAATGGGTCTGTAGTCATGAACTGTGCGAGACTCCAATTTCTTTGGAATGAGGCATTGATAATCCATGTTCTTAAAATATCTTGGAACGCTCTCATTGTGTCACTTTTAAGAAAGTTCCAATTTTTTTTTAGAGATTTCAGCATGATACCATCAGGACCCGGGGGATTTTTTAGTGCCTAATTCAGAAAACAGCATAGTAAATTTCTTAACTCTGGTTACGTTCAAGCTGTGAAGCTGAATGATCTGAAATATGGTCTCATTGAGTAATATTCGGGAGGGTTTGTAACAGCCCAAGCCCATCGCTAACGGATATCGTCCGCTTTGGCCTGTTAAGTATCGTTGTCAGCCTCACGGTTTTAAAACGCGTCTACTAGAGTGAGGTTTCCACACCCTTATAAACAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCTCCTTGGGGGTCTAGTGTTCTCGCTGGCACATTGCACGGAACCTTCCTCTAATACCATTTGTAATAACCCAAGCCTACAGCTAGTAAATATTGTCCTTTTGGCCCGTTACGTAACACCGTCAGCATCACGGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACATCCTCATAAGGAATGCTCCATGCCTCTCTCCAACCGACGTGGGATCTCACAATCCAACCCCTTTGGGGGTCCAACGTCCTCGCTGGCACACTTCATGGAACCTACCTTTGATACCATTTGTAACAACCCAAGCCTACCGCTAGCAGATATTTTGCCCTTTTGGCCTGTTACGTAATGCTGTTAGCCTCACGGTTTTAAAACGCGCCTACTAGGGAGAGATTTCTACACCCTCATAAGGAATGTTTCGTTTCCCTCTCCAATCGAAGTAAGATCTCACAGGGTCCAACCAGCCGTGGGTGAAAAAGGTGATGAAATCCCTCTCATTTTCAGCATCCAATAGGCTGCTAGTGCCATCGATTATTTGTCGGACACTCCTTTTTATTTCAGCACCGTTTGGTTAGACCTTTCTCATGAATAACACATCCTTTTTATTTCTCAATGAATTTCACAAGATATTGTACTAGTATGAAGCTGTCATGACAGAGGACAGGTATAATCCTTGTGTGATGAAGATCTCCAAACATGATCTCCATGTTTTTATGATACTTAAATATAGTTGTTAATAAAGCTCTATGACATTGTTGGGTTTGTAGGCAATGGCTCAAGTAGGCGGTCTAGTTATGCTGCAACCAGAGGTGGGAGGCTCACGCGACAACTTCTTCTTCGCTGGAATCGACAAAGTGAGGTTCCGAAAACCCGTGATCGCAGGAGACACATTGGTGATGCGAATGACTCTTGTCAAGTTGCAGAAGAAGTTCGGAATTGCCAAAATGGAAGGGAAGGCGTACGTCGGAGGCGAAGTCGTGTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAATGAAAATTTGGTCATTTATATGTGATGGATATGGAAATGAATATTACAGACGTTGGAGTTTAAAGCCTATGATATAAATGTTTGTGTTTCAGGAAAAGCTTTTCTTTGTAGGTTTTGATTTTTGAAAAAATTATTTTAAATT ATCATCGTTCTGTCAGTGGGAAGGCCAATGCGAATGCGTTGGATTTGTGCTCTTTTACAGCTTTAAACTACACTCTCTAAACGTTAATTCATTCCCACACCTTCGTTCCCACCGTCTTTCAGAGCTTCCTCTCATCCCCAACAATGGCGGCCACTTCCACTTCTCTCTTCTCCTTCACCCATACTCAATGCCCGGACAAACCCAGATCCCTTCTTCGTCCCACACCCTTTGTTTCCCTCTTCAGATCTGCTTCCCTCTCTTTTCCCTCCAATTCGCTTCCCACTTTCCGCTGTTCTCTCAATACCGCCGTCCACGACGCACCCATTGAAGAAAAGTTAGATGTTCCCATCGAAAAGAAGTTTCCATCTTTTCCCACTGTGATGGATATCAATGAAATTCGTAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTAGATAGAGTGATCGAATACAATCCTGGGGTTTCCGCTGTTGCTATTAAGAATGTTACCATCAATGATAACTTCTTTCCAGGCCACTTCCCTGATAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGCGGTCTAGTTATGCTGCAACCAGAGGTGGGAGGCTCACGCGACAACTTCTTCTTCGCTGGAATCGACAAAGTGAGGTTCCGAAAACCCGTGATCGCAGGAGACACATTGGTGATGCGAATGACTCTTGTCAAGTTGCAGAAGAAGTTCGGAATTGCCAAAATGGAAGGGAAGGCGTACGTCGGAGGCGAAGTCGTGTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAATGAAAATTTGGTCATTTATATGTGATGGATATGGAAATGAATATTACAGACGTTGGAGTTTAAAGCCTATGATATAAATGTTTGTGTTTCAGGAAAAGCTTTTCTTTGTAGGTTTTGATTTTTGAAAAAATTATTTTAAATT ATGGCGGCCACTTCCACTTCTCTCTTCTCCTTCACCCATACTCAATGCCCGGACAAACCCAGATCCCTTCTTCGTCCCACACCCTTTGTTTCCCTCTTCAGATCTGCTTCCCTCTCTTTTCCCTCCAATTCGCTTCCCACTTTCCGCTGTTCTCTCAATACCGCCGTCCACGACGCACCCATTGAAGAAAAGTTAGATGTTCCCATCGAAAAGAAGTTTCCATCTTTTCCCACTGTGATGGATATCAATGAAATTCGTAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTAGATAGAGTGATCGAATACAATCCTGGGGTTTCCGCTGTTGCTATTAAGAATGTTACCATCAATGATAACTTCTTTCCAGGCCACTTCCCTGATAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGCGGTCTAGTTATGCTGCAACCAGAGGTGGGAGGCTCACGCGACAACTTCTTCTTCGCTGGAATCGACAAAGTGAGGTTCCGAAAACCCGTGATCGCAGGAGACACATTGGTGATGCGAATGACTCTTGTCAAGTTGCAGAAGAAGTTCGGAATTGCCAAAATGGAAGGGAAGGCGTACGTCGGAGGCGAAGTCGTGTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAATGA MAATSTSLFSFTHTQCPDKPRSLLRPTPFVSLFRSASLSFPSNSLPTFRCSLNTAVHDAPIEEKLDVPIEKKFPSFPTVMDINEIRNILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRDNFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKKFGIAKMEGKAYVGGEVVCEGEFLMAMGKEE Homology
BLAST of Carg05795 vs. NCBI nr
Match: KAG7015363.1 (fabZ [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 451.4 bits (1160), Expect = 4.4e-123 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg05795 vs. NCBI nr
Match: KAG6577280.1 (hypothetical protein SDJN03_24854, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121 Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg05795 vs. NCBI nr
Match: XP_022929435.1 (uncharacterized protein LOC111436009 [Cucurbita moschata]) HSP 1 Score: 445.3 bits (1144), Expect = 3.2e-121 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Carg05795 vs. NCBI nr
Match: XP_023551907.1 (uncharacterized protein LOC111809739 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115 Identity = 214/224 (95.54%), Postives = 215/224 (95.98%), Query Frame = 0
BLAST of Carg05795 vs. NCBI nr
Match: XP_022985140.1 (uncharacterized protein LOC111483223 [Cucurbita maxima]) HSP 1 Score: 415.2 bits (1066), Expect = 3.5e-112 Identity = 209/224 (93.30%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy Swiss-Prot
Match: P73848 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=fabZ PE=3 SV=2) HSP 1 Score: 166.0 bits (419), Expect = 4.9e-40 Identity = 85/146 (58.22%), Postives = 110/146 (75.34%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy Swiss-Prot
Match: Q8DI01 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=fabZ PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39 Identity = 80/144 (55.56%), Postives = 112/144 (77.78%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy Swiss-Prot
Match: B0JIT3 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=fabZ PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 4.1e-39 Identity = 79/148 (53.38%), Postives = 108/148 (72.97%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy Swiss-Prot
Match: Q3MH14 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=fabZ PE=3 SV=2) HSP 1 Score: 162.2 bits (409), Expect = 7.0e-39 Identity = 83/149 (55.70%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy Swiss-Prot
Match: Q8YUR4 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=fabZ PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38 Identity = 83/149 (55.70%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy TrEMBL
Match: A0A6J1EUE3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111436009 PE=3 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 1.5e-121 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy TrEMBL
Match: A0A6J1JAJ4 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111483223 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.7e-112 Identity = 209/224 (93.30%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy TrEMBL
Match: A0A6J1J565 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111481409 PE=3 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106 Identity = 200/224 (89.29%), Postives = 206/224 (91.96%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy TrEMBL
Match: A0A6J1FMU4 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111447250 PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105 Identity = 198/224 (88.39%), Postives = 204/224 (91.07%), Query Frame = 0
BLAST of Carg05795 vs. ExPASy TrEMBL
Match: A0A0A0KXT9 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucumis sativus OX=3659 GN=Csa_4G029990 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 5.5e-95 Identity = 184/224 (82.14%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of Carg05795 vs. TAIR 10
Match: AT2G22230.1 (Thioesterase superfamily protein ) HSP 1 Score: 297.0 bits (759), Expect = 1.3e-80 Identity = 153/193 (79.27%), Postives = 168/193 (87.05%), Query Frame = 0
BLAST of Carg05795 vs. TAIR 10
Match: AT5G10160.1 (Thioesterase superfamily protein ) HSP 1 Score: 293.1 bits (749), Expect = 1.9e-79 Identity = 150/195 (76.92%), Postives = 166/195 (85.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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