Carg05783 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05783
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondrial transcription termination factor family protein
Location	Carg_Chr16: 4441817 .. 4442992 (+)
RNA-Seq Expression	Carg05783
Synteny	Carg05783

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCGCTGAGATCATCGTTTTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTAAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGTCTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCCAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCAGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA

mRNA sequence

ATGTACGCGCTGAGATCATCGTTTTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTAAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGTCTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCCAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCAGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA

Coding sequence (CDS)

ATGTACGCGCTGAGATCATCGTTTTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTAAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGTCTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCCAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCAGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA

Protein sequence

MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVTELLAAFRGQCMDELQPKELET

Homology

[Close]

BLAST of Carg05783 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 760.4 bits (1962), Expect = 7.8e-216
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Carg05783 vs. NCBI nr
Match: XP_022929526.1 (uncharacterized protein LOC111436067 [Cucurbita moschata])

HSP 1 Score: 745.0 bits (1922), Expect = 3.4e-211
Identity = 382/391 (97.70%), Postives = 387/391 (98.98%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           N GLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ MQRC DKLM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of Carg05783 vs. NCBI nr
Match: XP_023552360.1 (uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552361.1 uncharacterized protein LOC111810052 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 737.6 bits (1903), Expect = 5.4e-209
Identity = 379/391 (96.93%), Postives = 385/391 (98.47%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEIL+SVFPKDECNSDLLQ MQRC DKLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           R PYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTS GKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAM+GRVLPRYRVLQVVKSK LL KHPQL+DILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Carg05783 vs. NCBI nr
Match: XP_022929189.1 (uncharacterized protein LOC111435860 [Cucurbita moschata])

HSP 1 Score: 736.9 bits (1901), Expect = 9.2e-209
Identity = 378/391 (96.68%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRG++STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQVMQRCSD LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATF+KKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Carg05783 vs. NCBI nr
Match: XP_023552362.1 (uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 378/391 (96.68%), Postives = 385/391 (98.47%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEIL+SVFPKDECNSDLLQ MQRC DKLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           R PYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTS GKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAM+GRVLPRYRVLQVVKSK LL KHPQL+DILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Carg05783 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.6e-08
Identity = 44/161 (27.33%), Postives = 80/161 (49.69%), Query Frame = 0


Query: 75  KPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFIS 134
           K + V ++L +LG  K+ I + +   PQI   ++   LKP + F + LG+  +   + IS
Sbjct: 231 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIS 290

Query: 135 KHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLMRSPYTRLLVNINYL 194
           +   +LT S  +KL  +VE L      +E    + +++ RC + +  S   +L   + Y 
Sbjct: 291 RFPAILTYS-RQKLTSTVEFLSQTGLTEE---QIGRILTRCPNIMSYSVEDKLRPTMEYF 350

Query: 195 QSCGIVGSQLSMLLKRQPALFG-KRESQVRDIVSMVVETGF 235
           +S  +    +++LL R P  FG   ES ++ +    +E GF
Sbjct: 351 RSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGF 384

[Close]

BLAST of Carg05783 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 51/292 (17.47%), Postives = 119/292 (40.75%), Query Frame = 0


Query: 79  VYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHST 138
           V KYL  L    + +   +   P++    +E T+   + +   +G+   ++G  ++++  
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277

Query: 139 LLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM-RSPY-------TRLLVN 198
           +L + + + + P VE L           ++L + +  + +L+ + P+         +  N
Sbjct: 278 ILGMRVARIIKPLVEYL-----------EVLGIPRLAAARLIEKRPHILGFELDDTVKPN 337

Query: 199 INYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTK---MFVHGLHA 258
           +  LQ   +  + L  ++ + P + G       D    ++ +    N +     +  +  
Sbjct: 338 VQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQ 397

Query: 259 ISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRS 318
             S++ +   K ++ +   G +  +   M    P ++  ++G +K   E+F  E +    
Sbjct: 398 FVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQ 457

Query: 319 DIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKK--HPQLLDILGMSDEDF 358
           D+V  P    + ++  V PR+        K ++KK     L  +L  SDE F
Sbjct: 458 DLVDFPAFFTYGLESTVKPRH--------KKIIKKGIKCSLAWMLNCSDEKF 490

[Close]

BLAST of Carg05783 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.6e-06
Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 69  GIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSD 128
           G    E+ + + KY   LG  K  ++  + + P +   ++E+T+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLMRSPYTRLL 188
           +G  + K  +LLT SL KK+ P V  L  +        D+ +V+      L  S  T+L 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFL--LTRAGVTQKDIGKVIAMDPALLGCSIGTKLE 500

Query: 189 VNINYLQSCGIVGSQLSMLLKRQPAL 215
            N+ Y  S GI   QL  ++   P L
Sbjct: 501 PNMRYYISLGIRFYQLGEMIADFPML 524

[Close]

BLAST of Carg05783 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.1e-06
Identity = 66/282 (23.40%), Postives = 121/282 (42.91%), Query Frame = 0


Query: 82  YLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLT 141
           YL  +G     I+  +   PQI    +E  LK  I F   LG+  S +G+ ++   +L +
Sbjct: 225 YLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFS 284

Query: 142 VSLEKKLMPSVE-ILKSVFPKDECNSDLLQVMQRCSDKLMRSPYTRLLVNINYLQSCGIV 201
            S+E  L P++  +++ V  K+   +D+ +V+Q     L              +Q   I 
Sbjct: 285 YSVENSLRPTIRYLIEEVGIKE---TDVGKVVQLSPQIL--------------VQRLDIT 344

Query: 202 GSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFQKKV 261
            +   M L ++  L   R+S    +V MV         K     LH   S+ +  F  ++
Sbjct: 345 WNTRYMFLSKE--LGAPRDS----VVKMV---------KKHPQLLH--YSIDDG-FLPRI 404

Query: 262 ELICSFGITEKECMRMFTSAPVLIRTSV-GKLKRGLEFFMNEAEVSRSDIVRKPTCLMHA 321
             + S G+   + +++ TS   ++  S+   LK    + +NE       + + P  L  +
Sbjct: 405 NFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLS 464

Query: 322 MQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKF 362
           +  R+ PR+R L  +K    ++K P  L  L  +DE F  ++
Sbjct: 465 LDQRIRPRHRFLVELKK---VRKGPFPLSSLVPNDESFCQQW 468

[Close]

BLAST of Carg05783 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.6e-04
Identity = 37/145 (25.52%), Postives = 65/145 (44.83%), Query Frame = 0


Query: 74  EKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGL-VGSDLGRF 133
           EK   +  +   LG  +  +   I   P++   +I+  L   + F  +LGL     +G+ 
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 134 ISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLMRSPYTRLLVNIN 193
           + K+  L+  S++K+L P+ E LKS     E    +  V+      L R     L  N +
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSE--DGIKSVVMNFPQLLCRDVNKILKPNYD 231

Query: 194 YLQSCGIVGSQLSMLLKRQPALFGK 218
           YL+ CG   SQ++ ++   P +  K
Sbjct: 232 YLKECGFGDSQIATMVTGYPQILIK 254

[Close]

BLAST of Carg05783 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.6e-211
Identity = 382/391 (97.70%), Postives = 387/391 (98.98%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           N GLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ MQRC DKLM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of Carg05783 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 4.4e-209
Identity = 378/391 (96.68%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRG++STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQVMQRCSD LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATF+KKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Carg05783 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.5e-204
Identity = 369/391 (94.37%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIM SRRGI STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           NLGLVGSDLGRFISKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSDLLQV++RCSD LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRL VNINYLQSCGIVGSQLSMLLKRQPALFG RESQVRD+VSMVVETGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSV+NATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVV SK L KKH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Carg05783 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 4.5e-201
Identity = 365/387 (94.32%), Postives = 374/387 (96.64%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIM SRRGI STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180
           NLGLVGSDLG FISKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSD LQVM+RCSD L 
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFG RESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSV+NATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVV SK L KKH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPK 388
           FVHRFPD VTELLAAFRGQCMDELQPK
Sbjct: 361 FVHRFPDQVTELLAAFRGQCMDELQPK 387

[Close]

BLAST of Carg05783 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 2.1e-158
Identity = 293/390 (75.13%), Postives = 341/390 (87.44%), Query Frame = 0


Query: 1   MYALRSSFSISSRH-NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPAR 60
           MYALRS FS+S+RH +P       PL Y F SSSS  +ASA+  IVVQYL+D F LS AR
Sbjct: 1   MYALRSIFSLSARHCHPID----PPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTAR 60

Query: 61  AVSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFF 120
           A++IM  R+G++STEKP+SV KYLSELGFS AHIQS IR++PQIAFS++E+TLKPKIEFF
Sbjct: 61  ALAIMSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEFF 120

Query: 121 QNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKL 180
           QNLGLVGSDLG+FIS HS+LLTVSL+ KL PSVEILK+VFPKDE NS+LLQVM+RCSD L
Sbjct: 121 QNLGLVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDIL 180

Query: 181 MRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTK 240
           MR P +RLLVNINY +SCGIV SQLSMLLKRQP LFG+RES+VRD+VSM VETGFSTNTK
Sbjct: 181 MRCPESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNTK 240

Query: 241 MFVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFM 300
           MFVHGLHAISSV+NATF+KKVELICSFG TEKECM+MFTSAPVLIRTS+ KLK G+EFFM
Sbjct: 241 MFVHGLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFFM 300

Query: 301 NEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLD 360
           NEA+VSRS IVR+PT LMH+MQGRVLPRYRVLQVVKSK L +K+P+L+D LG+S+EDF D
Sbjct: 301 NEAKVSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFFD 360

Query: 361 KFVHRFPDHVTELLAAFRGQCMDELQPKEL 390
           KFV+RFPD+V +LL A+ GQC+D L+ KEL
Sbjct: 361 KFVYRFPDNVEDLLVAYSGQCVDALRRKEL 386

[Close]

BLAST of Carg05783 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 253.1 bits (645), Expect = 3.7e-67
Identity = 148/368 (40.22%), Postives = 230/368 (62.50%), Query Frame = 0


Query: 21  RIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVY 80
           R D  L     SS+ + AS S    V++L D     P  A++I      +KS E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  KYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLL 140
           + L    FS   IQ +IR+ P++ F N+E+ L+PK+ FF+++G  GS LG+F+S++S+++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TVSLEKKLMPSVEILKS-VFPKDECNSDLLQVMQRCSDKLM-RSPYTRLLVNINYLQSCG 200
            VSL KKL+P+VEILKS V PK E   DL  ++ RC   L+ R P   LL NI+YL++CG
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPKHE---DLPVILSRCGWLLLSRDPNLFLLPNISYLETCG 196

Query: 201 IVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFQK 260
           IVGSQL+ LL+RQP +F   E ++R  VS  ++ GF+ N++M VH + ++SS++  TF +
Sbjct: 197 IVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDR 256

Query: 261 KVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMH 320
           KV+L  + G +E E   +   +P LIR S  KL  G EF++    + R  + ++P  L +
Sbjct: 257 KVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSY 316

Query: 321 AMQGRVLPRYRVLQVVKSKSLL----KKHPQLLDILGMSDEDFLDKFVHRFPDHVT-ELL 380
            ++ RV+PR +VLQ+++ K LL    KK   ++ I+ M++E FL+K+V RF D +  ELL
Sbjct: 317 NLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELL 376

Query: 381 AAFRGQCM 382
            A++  C+
Sbjct: 377 VAYKCVCL 380

[Close]

BLAST of Carg05783 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-37
Identity = 98/334 (29.34%), Postives = 172/334 (51.50%), Query Frame = 0


Query: 46  VQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAF 105
           + YLID+  LSP  A ++   +  + S E+P +V   L + GF+ A I S ++  P +  
Sbjct: 72  LNYLIDSCGLSPDSA-TVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 131

Query: 106 SNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECN 165
           +N E  L PK+ FF ++G+  S L R ++   T+LT SL  +L+PS   LKSV   DE  
Sbjct: 132 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE-- 191

Query: 166 SDLLQVMQRCSDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDI 225
             ++  ++R +   +      L+ NINY+   G+    + +LL   P    ++  + + I
Sbjct: 192 -KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 251

Query: 226 VSMVVETGFSTNTKMFVHGLHAISSVTN-ATFQKKVELICSFGITEKECMRMFTSAPVLI 285
                E GF+     FV  +HA+S   N + + K  E+   +G +E + M  F   P  +
Sbjct: 252 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 311

Query: 286 RTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHP 345
             S  K+ R +E+F+NE  ++   I + P  L  +++ R++PR  V +V+ S  L+K+  
Sbjct: 312 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 371

Query: 346 QLLDILGMSDEDFLDKFVHRFPDHVTELLAAFRG 379
            L  +L   ++ FL+K V ++ + + EL+  + G
Sbjct: 372 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of Carg05783 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 142.9 bits (359), Expect = 5.5e-34
Identity = 95/348 (27.30%), Postives = 170/348 (48.85%), Query Frame = 0


Query: 31  SSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYLSELGFSK 90
           S +   Q        V YL+D+  LS   A S  R  + + S++KP SV     + GF+ 
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVK-LVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKKLMP 150
             I S I+  P++   + E  + PK+ FF ++G   SD  + IS    +L+ SL K+L+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKSVFPKDECNSDLLQVMQRC-SDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLK 210
             + LKS+  ++E     L+   RC S K+       + + ++  +  G+    +  L++
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRCFSLKITHC----VSLRVSICRELGVPDKSIKWLVQ 223

Query: 211 RQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFQKKVELICSFGIT 270
             P  F  RE +  ++++ V   GF      FVH + A    + +  ++K +L   FG +
Sbjct: 224 ASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWS 283

Query: 271 EKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYR 330
           +++ +      P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +
Sbjct: 284 KEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQ 343

Query: 331 VLQVVKSKSLLKKHP-QLLDILGMSDEDFLDKFVHRFPDHVTELLAAF 377
           V+ ++ SK L+KK       IL +   +F+DKFV ++ D + +L+  F
Sbjct: 344 VISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of Carg05783 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 94/393 (23.92%), Postives = 167/393 (42.49%), Query Frame = 0


Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI R +   +    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISR-KVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVS 148
           +  GF+ + I + IR  PQ+  ++ E++L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLMRSPYTRLLVNINYLQSCGIVGSQ 208
             K +    + +K    +    ++ L         L +      + N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFQKKVEL 268
           L S+L+     + GK + +  + +  VVE GF   T  FV  L  I  +   T ++KV L
Sbjct: 213 LFSLLISDSQPVCGKEKFE--ETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFGITEKECMRMFTSAPVLIRTSVGKL------------------------------- 328
             S G    +    F   P+ +R S  K+                               
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 329 ----KRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKH-PQL 378
               K+  EF + +       +V  P    ++++ R++PR  V++ + SK L++   P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

[Close]

BLAST of Carg05783 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 94/393 (23.92%), Postives = 167/393 (42.49%), Query Frame = 0


Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI R +   +    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISR-KVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVS 148
           +  GF+ + I + IR  PQ+  ++ E++L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLMRSPYTRLLVNINYLQSCGIVGSQ 208
             K +    + +K    +    ++ L         L +      + N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFQKKVEL 268
           L S+L+     + GK + +  + +  VVE GF   T  FV  L  I  +   T ++KV L
Sbjct: 213 LFSLLISDSQPVCGKEKFE--ETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFGITEKECMRMFTSAPVLIRTSVGKL------------------------------- 328
             S G    +    F   P+ +R S  K+                               
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 329 ----KRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKH-PQL 378
               K+  EF + +       +V  P    ++++ R++PR  V++ + SK L++   P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

The following BLAST results are available for this feature:

BLAST of Carg05783 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015351.1	7.8e-216	100.00	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022929526.1	3.4e-211	97.70	uncharacterized protein LOC111436067 [Cucurbita moschata]	[more]
XP_023552360.1	5.4e-209	96.93	uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022929189.1	9.2e-209	96.68	uncharacterized protein LOC111435860 [Cucurbita moschata]	[more]
XP_023552362.1	1.2e-208	96.68	uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg05783 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	8.6e-08	27.33	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	1.6e-06	17.47	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	3.6e-06	28.77	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	6.1e-06	23.40	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	2.6e-04	25.52	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of Carg05783 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1END2	1.6e-211	97.70	uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1EN21	4.4e-209	96.68	uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1JB80	1.5e-204	94.37	uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J5Y4	4.5e-201	94.32	uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C8W1	2.1e-158	75.13	uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg05783 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64950.1	3.7e-67	40.22	Mitochondrial transcription termination factor family protein	[more]
AT5G07900.1	2.4e-37	29.34	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.5e-34	27.30	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.3e-22	23.92	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.3e-22	23.92	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 205..235 e-value: 12.0 score: 14.8 coord: 169..200 e-value: 770.0 score: 4.8 coord: 130..162 e-value: 4.7 score: 16.2 coord: 274..305 e-value: 9.4 score: 15.2 coord: 306..337 e-value: 590.0 score: 5.7 coord: 94..125 e-value: 0.65 score: 19.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 81..236 e-value: 1.5E-15 score: 57.0 coord: 251..358 e-value: 2.4E-15 score: 56.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 31..378
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 164..371 e-value: 1.2E-36 score: 128.3
None	No IPR available	PANTHER	PTHR13068:SF173	EMB\|CAB62602.1	coord: 31..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05783-RA	Carg05783-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding