Carg05717 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05717
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein translocase complex, SecE/Sec61-gamma subunit
Location	Carg_Chr16: 4026856 .. 4028658 (+)
RNA-Seq Expression	Carg05717
Synteny	Carg05717

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAACTATACTGCGTGCATTTTCATTGTTCATTCTAAAGGCGCGCTCATCGTAGCTGCAGTCTACGAGAAGCCTGAAATTTTCGAGGTACGCATTTCTTCATAAATCTTCATCCTTATTCGAATTCAGAGTTCATATTACATTACATGTATGATTCATTGCTTATTTAAATCCCCTTTAGTCGAGGTTCTGTTGCTTTGCCGCCAATGGTTGCTGACCTTGTTGAAGCTCCTATAGTTTCGTCTTTCAAAATTTCAATTGTTGTGTTTTTTCGTGCAATATGCAAGAAATGTGCGATCATGAGAGGATATTAAGATTGAAAATGCCGGGGCAGAGAATTAGTTTGGATTGTTATTGAAGTTTCTTCCGATACCCCACAATGCACTGGTTGTGTTTGTTAAAATGTCTAGCTGAACTAGTACTCGTTAATCTTCCATTCTTTCTTTTGGGTTGTGTCTGCTATAGCGTTTTTGTTACGCCCTCTTTGATTTTTCTGTTATTTGGTTGCCGTTCTTGATGCCTTTGGAGCTTAGCTTATTCAATGAAACAATTAAGCTGTTTTATTGTGTTTTGAGCAACTGGGAAGTCTTGTAATTACTCGTATGTATGTATGTATGTTTGTTTGTTTGTTTGTTTGTTTCACATTGAGTTTGTTAATGGATCAGTAGTAAGCATTTTTCTCTTGTTGCAGTGGGCGTTATTAAACTCTTGCACTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTTAATCCTTTTCTCTCTCGGAATATATGTTTATTACTGTGAAAACATTGAGTTTGCTTAATCTTTCTCTCATTTTCTTTTTCTTAAATCTATAGGAATGGCTTCTCTTCCTCATTCGAATCGAACATTTCATGTTCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGGTACTTTCTATCATTTGAGACTTTTGAATTTGATTGCTCTTACAATCTGCTCATTTCAATTCTGGGTTTGTTACTTTAGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGTAATCTTTCACAACTCTTTCTCCCGTCTATGTGAATTTTGGATCATTATGTCCAGGATTGTTTTGTTTTGAACCACAGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGGTATGGAGGCGAGATTAGTATGTTAATAATGCATATGCATTTGAATTCTTGTAGGAGATTCATGTATGATGAAATACTTAATTTATGATGGGAATTCACTGAATATTCTTTCTGAACTTTGGTGTTTATTCTAAATTCATCCAATTTAGTGCGTAAAATTTTCACTTTTTCTCTCCTGTTGGTGCAGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAATGAATTCTGGTACTTCTCACTTCTTGTTACAAAATATTTTCAGAACTTCAACTTTTCTTTGCTGTTTTTAAATCGATGGTTGAGAGTGAGCGTTCTTGGTGTATATTAATGTTGTTGGAGATGTTTACACTAGCGTGTCTATGAAATCATGCCGTAAGGGAAGTATAGAGA

mRNA sequence

CCCAACTATACTGCGTGCATTTTCATTGTTCATTCTAAAGGCGCGCTCATCGTAGCTGCAGTCTACGAGAAGCCTGAAATTTTCGAGTGGGCGTTATTAAACTCTTGCACTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGAACATTTCATGTTCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAATGAATTCTGGTACTTCTCACTTCTTGTTACAAAATATTTTCAGAACTTCAACTTTTCTTTGCTGTTTTTAAATCGATGGTTGAGAGTGAGCGTTCTTGGTGTATATTAATGTTGTTGGAGATGTTTACACTAGCGTGTCTATGAAATCATGCCGTAAGGGAAGTATAGAGA

Coding sequence (CDS)

CCCAACTATACTGCGTGCATTTTCATTGTTCATTCTAAAGGCGCGCTCATCGTAGCTGCAGTCTACGAGAAGCCTGAAATTTTCGAGTGGGCGTTATTAAACTCTTGCACTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGAACATTTCATGTTCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAA

Protein sequence

PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

Homology

[Close]

BLAST of Carg05717 vs. NCBI nr
Match: KAG7015285.1 (hypothetical protein SDJN02_22920, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385.2 bits (988), Expect = 3.4e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNR 60
           PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNR
Sbjct: 1   PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNR 60

Query: 61  TFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP 120
           TFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP
Sbjct: 61  TFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP 120

Query: 121 FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD 180
           FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD
Sbjct: 121 FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD 180

Query: 181 SVLSYILTFILRRTS 196
           SVLSYILTFILRRTS
Sbjct: 181 SVLSYILTFILRRTS 195

[Close]

BLAST of Carg05717 vs. NCBI nr
Match: XP_022928229.1 (uncharacterized protein LOC111435124 [Cucurbita moschata])

HSP 1 Score: 381.3 bits (978), Expect = 4.9e-102
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNR 60
           PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSC+RMVIASALGANHIGMASLPHSNR
Sbjct: 35  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCSRMVIASALGANHIGMASLPHSNR 94

Query: 61  TFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP 120
            FHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP
Sbjct: 95  PFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP 154

Query: 121 FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD 180
           FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD
Sbjct: 155 FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD 214

Query: 181 SVLSYILTFILRRTS 196
           SVLSYILTFILRRTS
Sbjct: 215 SVLSYILTFILRRTS 229

[Close]

BLAST of Carg05717 vs. NCBI nr
Match: KAG6589021.1 (hypothetical protein SDJN03_17586, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.9 bits (912), Expect = 2.2e-94
Identity = 181/186 (97.31%), Postives = 183/186 (98.39%), Query Frame = 0


Query: 10  VHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNRTFHVRYNTA 69
           +   GALIVAAVYEKPEIFEWALLNSC+RMVIASALGANHIGMASLPHSNRTFHVRYNTA
Sbjct: 38  IEQGGALIVAAVYEKPEIFEWALLNSCSRMVIASALGANHIGMASLPHSNRTFHVRYNTA 97

Query: 70  RLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET 129
           RLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
Sbjct: 98  RLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET 157

Query: 130 VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTF 189
           VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTF
Sbjct: 158 VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTF 217

Query: 190 ILRRTS 196
           ILRRTS
Sbjct: 218 ILRRTS 223

[Close]

BLAST of Carg05717 vs. NCBI nr
Match: XP_023529805.1 (uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 154/157 (98.09%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 39  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGF 98
           MVIASALGANHIGMASLPHSNR FHVRYNTAR NKANIFQGLPTRISRR GHLYADRMGF
Sbjct: 1   MVIASALGANHIGMASLPHSNRPFHVRYNTARFNKANIFQGLPTRISRRSGHLYADRMGF 60

Query: 99  NHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST 158
           NHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST
Sbjct: 61  NHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST 120

Query: 159 LKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 196
           LKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Sbjct: 121 LKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 157

[Close]

BLAST of Carg05717 vs. NCBI nr
Match: XP_022989177.1 (uncharacterized protein LOC111486331 [Cucurbita maxima])

HSP 1 Score: 288.5 bits (737), Expect = 4.3e-74
Identity = 148/157 (94.27%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 39  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGF 98
           MVIASALGANHIGM SLPHSNR F V YNTAR NKAN+FQGLPTRIS RGGHLYADRMGF
Sbjct: 1   MVIASALGANHIGMTSLPHSNRPFRVHYNTARFNKANLFQGLPTRISGRGGHLYADRMGF 60

Query: 99  NHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST 158
           NHAASGRDN QLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST
Sbjct: 61  NHAASGRDNPQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST 120

Query: 159 LKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 196
           LKTATFALVLVALLIVALSSVDSVLS+ILTFILRRTS
Sbjct: 121 LKTATFALVLVALLIVALSSVDSVLSFILTFILRRTS 157

[Close]

BLAST of Carg05717 vs. ExPASy TrEMBL
Match: A0A6J1EK97 (uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC111435124 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.4e-102
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCTRMVIASALGANHIGMASLPHSNR 60
           PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSC+RMVIASALGANHIGMASLPHSNR
Sbjct: 35  PNYTACIFIVHSKGALIVAAVYEKPEIFEWALLNSCSRMVIASALGANHIGMASLPHSNR 94

Query: 61  TFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP 120
            FHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP
Sbjct: 95  PFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEP 154

Query: 121 FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD 180
           FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD
Sbjct: 155 FFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVD 214

Query: 181 SVLSYILTFILRRTS 196
           SVLSYILTFILRRTS
Sbjct: 215 SVLSYILTFILRRTS 229

[Close]

BLAST of Carg05717 vs. ExPASy TrEMBL
Match: A0A6J1JF36 (uncharacterized protein LOC111486331 OS=Cucurbita maxima OX=3661 GN=LOC111486331 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.1e-74
Identity = 148/157 (94.27%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 39  MVIASALGANHIGMASLPHSNRTFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGF 98
           MVIASALGANHIGM SLPHSNR F V YNTAR NKAN+FQGLPTRIS RGGHLYADRMGF
Sbjct: 1   MVIASALGANHIGMTSLPHSNRPFRVHYNTARFNKANLFQGLPTRISGRGGHLYADRMGF 60

Query: 99  NHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST 158
           NHAASGRDN QLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST
Sbjct: 61  NHAASGRDNPQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQST 120

Query: 159 LKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 196
           LKTATFALVLVALLIVALSSVDSVLS+ILTFILRRTS
Sbjct: 121 LKTATFALVLVALLIVALSSVDSVLSFILTFILRRTS 157

[Close]

BLAST of Carg05717 vs. ExPASy TrEMBL
Match: A0A6J1C3M0 (uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008049 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.4e-54
Identity = 115/158 (72.78%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 39  MVIASALGANHIGMASLPHSNRTFHVRY-NTARLNKANIFQGLPTRISRRGGHLYADRMG 98
           M IASALGANHIGM   PH  +  H+ + NT R NK+N FQ LP  ISRR GHLYA RM 
Sbjct: 1   MAIASALGANHIGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMS 60

Query: 99  FNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQS 158
           FNHAASGR+N QL FN+E PPEPF L +I+E +WGLRSL IFL EQPSQLKYIEWPSFQS
Sbjct: 61  FNHAASGRENHQLNFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLKYIEWPSFQS 120

Query: 159 TLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 196
           TLKTAT  LVLVALLIVALSSVDS LSYILT +LRR++
Sbjct: 121 TLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST 158

[Close]

BLAST of Carg05717 vs. ExPASy TrEMBL
Match: A0A0A0K1C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-53
Identity = 118/158 (74.68%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 39  MVIASALGANHIGMASLPHSNRTFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 98
           MVI S LG  HIG+  LP S   +HV +YNT RLNK+++FQ L TRIS+R G HLYA RM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 99  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 158
           GFNHAA  ++ QQ  FNDELPPEPFFL +IKET WGLRSL IFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 159 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT 195
           STLKTAT ALVLVALLIVALSSVDS LSY+LT ILRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]

BLAST of Carg05717 vs. ExPASy TrEMBL
Match: A0A1S3BJG9 (uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.8e-52
Identity = 117/159 (73.58%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 39  MVIASALGANHIGMASLPHSNRTFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 98
           MVI S LG +HIG+  LP     +HV RYN  RLNK+++FQ L TRIS+R G HLYA RM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 99  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 158
           GFNHAASG++ QQ  FNDE P EPFFL +IKET WGLRSL IFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 159 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 196
           STLKTAT ALVLVALLIVALSSVDS LSY+LT +LRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]

BLAST of Carg05717 vs. TAIR 10
Match: AT4G38490.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-20
Identity = 49/75 (65.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 119 EPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSS 178
           EP +L ++++ VW  RSL  F+AEQPSQLKYIEWP+F STLKTAT +L LVA+ IVALSS
Sbjct: 77  EPLWLSLLRDMVWSTRSLLSFMAEQPSQLKYIEWPTFASTLKTATLSLCLVAVFIVALSS 136

Query: 179 VDSVLSYILTFILRR 194
           VD+ L YIL  ILR+
Sbjct: 137 VDAALCYILALILRK 151

The following BLAST results are available for this feature:

BLAST of Carg05717 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015285.1	3.4e-103	100.00	hypothetical protein SDJN02_22920, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022928229.1	4.9e-102	98.97	uncharacterized protein LOC111435124 [Cucurbita moschata]	[more]
KAG6589021.1	2.2e-94	97.31	hypothetical protein SDJN03_17586, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023529805.1	1.4e-77	98.09	uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]	[more]
XP_022989177.1	4.3e-74	94.27	uncharacterized protein LOC111486331 [Cucurbita maxima]	[more]

BLAST of Carg05717 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05717 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK97	2.4e-102	98.97	uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC1114351...	[more]
A0A6J1JF36	2.1e-74	94.27	uncharacterized protein LOC111486331 OS=Cucurbita maxima OX=3661 GN=LOC111486331...	[more]
A0A6J1C3M0	1.4e-54	72.78	uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A0A0K1C8	1.2e-53	74.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1	[more]
A0A1S3BJG9	3.8e-52	73.58	uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=...	[more]

BLAST of Carg05717 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38490.1	2.9e-20	65.33	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 139..191 e-value: 5.1E-8 score: 32.7
IPR038379	SecE superfamily	GENE3D	1.20.5.1030	Preprotein translocase secy subunit	coord: 133..190 e-value: 6.8E-6 score: 27.8
None	No IPR available	PANTHER	PTHR37247	TRANSMEMBRANE PROTEIN	coord: 60..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05717-RA	Carg05717-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006605	protein targeting
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0090351	seedling development
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009528	plastid inner membrane
cellular_component	GO:0016020	membrane