Carg05706 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05706
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WD-40 repeat-containing protein MSI2-like
Location	Carg_Chr16: 3970677 .. 3973973 (-)
RNA-Seq Expression	Carg05706
Synteny	Carg05706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGCGGGAAAAAGTTTCACGAAGCTCCGTCAGAGTCGCAGCAATGGCGGGAGAACAGAACGGCGGTGTCGATGAGGTGATGGAGGAATTCGCCATCTGGAAGAAGAATTCTCCCTATTTGTACGATCTTCTCATTTCTCACTCTCTTGAGTGGCCGTCTCTCACTGTTGATTGGGTGCCATTGGCACCATTTCCTCACCCAGCCAATTCTTCTCTCGCTGTCCACAAGCTCGTTCTTGGAACTCACACTTCGGAGGAAGTCCCCAACTTTCTCATGGTGGCCGATGTAATTTTACCTGTCAAAGCATCCGAAACTAGAATCGACATTACTGGGGAAAACCCCATCATGCCGGAGGTTAGTGATGAATTGTTACTTTGTGCGTGCTAGGTGTTTGATGAAATGCCTTGCTGAAATTCTGTGATGTTTTGTATTGGGTTTTGGTAGGTAGAGATAACCCAGAAGATACGTGTTGATGGAGAGGTGAACAGAGCGCGATGCATGCCGCAGAACCCAGAAATTATTGGGGCAAAAACGAGTGGCTGTGAGGTGTATGTTTTTAATTGTGCTAAACAGGGGGCGAAGGCTCAGGGAGGTGAGTGCGATCCTGATTTGAGATTGAGGGGTCATGATAAAGAGGGTTATGGGTTGTCTTGGAGCCCTTTTAAGGAGGGTTACCTCTTAAGTGGCTCAAATGATCAGAAAATCTGTTTGTGGGACGTGTCTTCCATGGCTGACAAGAACGTTCTTGATGCAATGAACGTCTATGAGGTAAAGGAACTAATCTTCCTGTTTTTTTGTTGAGGGCTATTGTTTTTAACTTTACTTTAAAATGGTGTTGCTGTTTTTATTTTCAGGCTCATGAAAGTGTGGTCGGTGATGTGTCATGGCATTTGAAGAATGAGAACTTGTTTGGGTCTGTAGGCGATGATTGCTTGTTGGTGATATGGGATTTGCGCACAAATAAATCTGTGGATTCTGTTCGAGCTCACGAGGAGGAGGTAGTTCTATTCTGAACCTCTTTGTAGCATTAGGCAATTGACTCTCTTACTTGCTTAGCTTGTTAATGTCTTGGTTGGTTAGGAATCACGACTCTTCACAATGGTATGATATTGTCACTTTGAGCATAAGCTCTTATGGCTTCCTTTTGGGTTTCTCCAAAATAACTCATTCTAATGGAGATGTATTCCATACTTATAAACTCATGATCAATGCCTAAATTAGCAAATGTGAGACTCCCTCCCAACAATTTTCAACACCTTTCTGAAGTCGGGATTAGGGTTGATTGGAATAGAGGTTGTACTTGCGCCAACACTGGCTTTTGGCGGATATATGATGCTATATTCAAACAGCTAACTGAAGAATGGCGGTTTGGGTAGCTTAGGCCACATGATCATCGATCAGGGTTAAGATTTTTTTTAGTATCTGCAAGTGTCTGAACCAGCATATACCCACACCTTGACTATTCTCGATCATGATCAAGTTTCAGTCTTGAGTTAGAATTATATCTCTTATGAACACCATTTACATATACTCTATGTTCTATTGACACAAACTTTCTGTTCCATGGATTGATTACAGGTGAACTATGTTTCTTTCAATCCATATAACGAATGGATTTTAGCAACAGCATCATCAGATACCACTGTGGGTCTATTCGATCTACGAAAGCTTGCCGAACCACTCCACGTTCTTAGCAGCCACACGTATGTCTCTCTCTACATATCACTATCAAATCATCTGTCTTTATTTACATTTAAGCAAAAAACAATGATGTGATATTTCTTTGTGATCGTTTCTTGTGTCTAACTTCAGTGTGTTTGTTTACAATTCTTGACGAGTTTGTTTTTAGTTTTCTGTCGTAGAAAATTGTGTCTAACTTATACGCAGAAATAGTGTTATAAGCTTGATTTTTAAAGAACAAATGATGATCAAACGGGATCTAAGCTAAGGAAAGAGTATTATACTGATTGGTGACACAGGGAGGGAGTGTATGAGGTGGAGTGGGATCCAAATCATGAAACTGTATTAGCATCTTCTGGTGATGATAGAAGGTTGATGGTATGGGATCTCAACAACATGGGAAACGAGCAAGATGGGGATGCTGAAGATGGGCCTCCAGAGCTGCTGTTTTCACACGGAGGCCACAAGGCTAAAATCTCTGACTTCACCTGGAACGCCCACCAGCCTTGGGTTATAGCAAGCGTCGCTGAAGACAACTCTGTTCAGGTCTGGCAAATGGCCAAAGGTATTTATCGATGATGATTTCTACTTTACTCCATTCTTCAAATTTAGCCACTTTAAGGTTTTCTTATGTATTAGGAGTCATAATGTTATGTTTCTGCTGCTGTTTTGACAAAGATGGGCTCATTTTCTGTTCAACATACTAAACTCGTTAGCCTATTCTCTTTAGTGTAGCTTAGCCTGGCAAGATACTTTAGTCAAGGTATAGATCGATCGAAAGTAATTACTGATAGGGCTTATATCTTTAAAGGTTCAAGCCTGGGGCGAAGGAAGGCTTATGTAATCAAATACACAAAAGCTGCCTCTAAAGAAAATAATTCTCAGAATGCATATTAGAAACTGAAATCAAATAGAGAACAAAACCAATACAGTTGGGTGCTCTGCCTTTTGTTAGTTTTCATAGAGAAAGAAAAGGCTGAGTCGAAATGGTGTTCGAGTCCCCATTTGGGGCCATTCAAATTTGCTCTACTTTCACTAACAAAACTTGGCTAAGCTATTCCATCTCGCTTCTCCATATCCAAAGACGCGTATAGGAACTGGAGTGTTCCATATGAAGAAGCTTCGCCATTTCAGATGGGTCGAGAGGCGATCGATAACGAGATGATAATCAAATGTTGCAGTTGCGCAACAATACACTTATTGATCGAGGTATGCACCACCCCGCAGGCATTGACTGGATGAAGACGTTGATGGCTGACTAGACTAATCAGTTCATCAGGTCCATGTCTCTTTACGTCGTCCTAATAAGCGAATGACAGAACAAAAGAACAAAAGAGTTACAACTTATATCAAAAGAAACCTGTTATTTTCATAGGTCCCAACAAAAGTAGAATAAAATGGAAAACAATATGATTATATAACTATTCAACCATGGCCAGTTCATAAAGCAAACATCTCCTTTTTCATGATCCAGGAAAAACTAGGATAGGTCTCTTATCCACTAGATTCAAGATAAGGAACTTTATTTTGCTATCAAAAAAGTGAAAAAGATTGGATCGAATGGGGTAAACAGTTGGGCACTGTTTCTTCAAAAGAGTGGCCAATAAACACATTG

mRNA sequence

TTTAGCGGGAAAAAGTTTCACGAAGCTCCGTCAGAGTCGCAGCAATGGCGGGAGAACAGAACGGCGGTGTCGATGAGGTGATGGAGGAATTCGCCATCTGGAAGAAGAATTCTCCCTATTTGTACGATCTTCTCATTTCTCACTCTCTTGAGTGGCCGTCTCTCACTGTTGATTGGGTGCCATTGGCACCATTTCCTCACCCAGCCAATTCTTCTCTCGCTGTCCACAAGCTCGTTCTTGGAACTCACACTTCGGAGGAAGTCCCCAACTTTCTCATGGTGGCCGATGTAATTTTACCTGTCAAAGCATCCGAAACTAGAATCGACATTACTGGGGAAAACCCCATCATGCCGGAGGTAGAGATAACCCAGAAGATACGTGTTGATGGAGAGGTGAACAGAGCGCGATGCATGCCGCAGAACCCAGAAATTATTGGGGCAAAAACGAGTGGCTGTGAGGTGTATGTTTTTAATTGTGCTAAACAGGGGGCGAAGGCTCAGGGAGGTGAGTGCGATCCTGATTTGAGATTGAGGGGTCATGATAAAGAGGGTTATGGGTTGTCTTGGAGCCCTTTTAAGGAGGGTTACCTCTTAAGTGGCTCAAATGATCAGAAAATCTGTTTGTGGGACGTGTCTTCCATGGCTGACAAGAACGTTCTTGATGCAATGAACGTCTATGAGGCTCATGAAAGTGTGGTCGGTGATGTGTCATGGCATTTGAAGAATGAGAACTTGTTTGGGTCTGTAGGCGATGATTGCTTGTTGGTGAACTATGTTTCTTTCAATCCATATAACGAATGGATTTTAGCAACAGCATCATCAGATACCACTGTGGGTCTATTCGATCTACGAAAGCTTGCCGAACCACTCCACGTTCTTAGCAGCCACACGGAGGGAGTGTATGAGGTGGAGTGGGATCCAAATCATGAAACTGTATTAGCATCTTCTGGTGATGATAGAAGGTTGATGGTATGGGATCTCAACAACATGGGAAACGAGCAAGATGGGGATGCTGAAGATGGGCCTCCAGAGCTGCTGTTTTCACACGGAGGCCACAAGGCTAAAATCTCTGACTTCACCTGGAACGCCCACCAGCCTTGGGTTATAGCAAGCGTCGCTGAAGACAACTCTGTTCAGGTCTGGCAAATGGCCAAAGGTATTTATCGATGATGATTTCTACTTTACTCCATTCTTCAAATTTAGCCACTTTAAGGTTTTCTTATGTATTAGGAGTCATAATGTTATGTTTCTGCTGCTGTTTTGACAAAGATGGGCTCATTTTCTGTTCAACATACTAAACTCGTTAGCCTATTCTCTTTAGTGTAGCTTAGCCTGGCAAGATACTTTAGTCAAGGTATAGATCGATCGAAAGTAATTACTGATAGGGCTTATATCTTTAAAGGTTCAAGCCTGGGGCGAAGGAAGGCTTATGTAATCAAATACACAAAAGCTGCCTCTAAAGAAAATAATTCTCAGAATGCATATTAGAAACTGAAATCAAATAGAGAACAAAACCAATACAGTTGGGTGCTCTGCCTTTTGTTAGTTTTCATAGAGAAAGAAAAGGCTGAGTCGAAATGGTGTTCGAGTCCCCATTTGGGGCCATTCAAATTTGCTCTACTTTCACTAACAAAACTTGGCTAAGCTATTCCATCTCGCTTCTCCATATCCAAAGACGCGTATAGGAACTGGAGTGTTCCATATGAAGAAGCTTCGCCATTTCAGATGGGTCGAGAGGCGATCGATAACGAGATGATAATCAAATGTTGCAGTTGCGCAACAATACACTTATTGATCGAGGTATGCACCACCCCGCAGGCATTGACTGGATGAAGACGTTGATGGCTGACTAGACTAATCAGTTCATCAGGTCCATGTCTCTTTACGTCGTCCTAATAAGCGAATGACAGAACAAAAGAACAAAAGAGTTACAACTTATATCAAAAGAAACCTGTTATTTTCATAGGTCCCAACAAAAGTAGAATAAAATGGAAAACAATATGATTATATAACTATTCAACCATGGCCAGTTCATAAAGCAAACATCTCCTTTTTCATGATCCAGGAAAAACTAGGATAGGTCTCTTATCCACTAGATTCAAGATAAGGAACTTTATTTTGCTATCAAAAAAGTGAAAAAGATTGGATCGAATGGGGTAAACAGTTGGGCACTGTTTCTTCAAAAGAGTGGCCAATAAACACATTG

Coding sequence (CDS)

ATGGCGGGAGAACAGAACGGCGGTGTCGATGAGGTGATGGAGGAATTCGCCATCTGGAAGAAGAATTCTCCCTATTTGTACGATCTTCTCATTTCTCACTCTCTTGAGTGGCCGTCTCTCACTGTTGATTGGGTGCCATTGGCACCATTTCCTCACCCAGCCAATTCTTCTCTCGCTGTCCACAAGCTCGTTCTTGGAACTCACACTTCGGAGGAAGTCCCCAACTTTCTCATGGTGGCCGATGTAATTTTACCTGTCAAAGCATCCGAAACTAGAATCGACATTACTGGGGAAAACCCCATCATGCCGGAGGTAGAGATAACCCAGAAGATACGTGTTGATGGAGAGGTGAACAGAGCGCGATGCATGCCGCAGAACCCAGAAATTATTGGGGCAAAAACGAGTGGCTGTGAGGTGTATGTTTTTAATTGTGCTAAACAGGGGGCGAAGGCTCAGGGAGGTGAGTGCGATCCTGATTTGAGATTGAGGGGTCATGATAAAGAGGGTTATGGGTTGTCTTGGAGCCCTTTTAAGGAGGGTTACCTCTTAAGTGGCTCAAATGATCAGAAAATCTGTTTGTGGGACGTGTCTTCCATGGCTGACAAGAACGTTCTTGATGCAATGAACGTCTATGAGGCTCATGAAAGTGTGGTCGGTGATGTGTCATGGCATTTGAAGAATGAGAACTTGTTTGGGTCTGTAGGCGATGATTGCTTGTTGGTGAACTATGTTTCTTTCAATCCATATAACGAATGGATTTTAGCAACAGCATCATCAGATACCACTGTGGGTCTATTCGATCTACGAAAGCTTGCCGAACCACTCCACGTTCTTAGCAGCCACACGGAGGGAGTGTATGAGGTGGAGTGGGATCCAAATCATGAAACTGTATTAGCATCTTCTGGTGATGATAGAAGGTTGATGGTATGGGATCTCAACAACATGGGAAACGAGCAAGATGGGGATGCTGAAGATGGGCCTCCAGAGCTGCTGTTTTCACACGGAGGCCACAAGGCTAAAATCTCTGACTTCACCTGGAACGCCCACCAGCCTTGGGTTATAGCAAGCGTCGCTGAAGACAACTCTGTTCAGGTCTGGCAAATGGCCAAAGGTATTTATCGATGA

Protein sequence

MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVHKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRARCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEGYLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLLVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAKISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR

Homology

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BLAST of Carg05706 vs. NCBI nr
Match: KAG7015274.1 (WD-40 repeat-containing protein MSI2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 786.9 bits (2031), Expect = 7.4e-224
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
Sbjct: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHTEGVYEVEWDPNHETVLAS 300
           VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHTEGVYEVEWDPNHETVLAS
Sbjct: 241 VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHTEGVYEVEWDPNHETVLAS 300

Query: 301 SGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAKISDFTWNAHQPWVIASVAED 360
           SGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAKISDFTWNAHQPWVIASVAED
Sbjct: 301 SGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAKISDFTWNAHQPWVIASVAED 360

Query: 361 NSVQVWQMAKGIYR 375
           NSVQVWQMAKGIYR
Sbjct: 361 NSVQVWQMAKGIYR 374

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BLAST of Carg05706 vs. NCBI nr
Match: XP_023529712.1 (WD-40 repeat-containing protein MSI2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 772.7 bits (1994), Expect = 1.4e-219
Identity = 373/394 (94.67%), Postives = 374/394 (94.92%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
Sbjct: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDFTWNA+QPWVIASVAEDNSVQVWQMAKGIYR
Sbjct: 361 ISDFTWNAYQPWVIASVAEDNSVQVWQMAKGIYR 394

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BLAST of Carg05706 vs. NCBI nr
Match: XP_022928345.1 (WD-40 repeat-containing protein MSI2-like [Cucurbita moschata])

HSP 1 Score: 772.7 bits (1994), Expect = 1.4e-219
Identity = 373/394 (94.67%), Postives = 373/394 (94.67%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
Sbjct: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPD RLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDSRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR
Sbjct: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 394

[Close]

BLAST of Carg05706 vs. NCBI nr
Match: XP_022989054.1 (WD-40 repeat-containing protein MSI2-like [Cucurbita maxima])

HSP 1 Score: 771.9 bits (1992), Expect = 2.5e-219
Identity = 371/394 (94.16%), Postives = 374/394 (94.92%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
Sbjct: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSE+VPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEDVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEI+GAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPEIVGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDF+WNAHQPWVIASVAEDNSVQVWQMAKGIYR
Sbjct: 361 ISDFSWNAHQPWVIASVAEDNSVQVWQMAKGIYR 394

[Close]

BLAST of Carg05706 vs. NCBI nr
Match: KAG6589011.1 (WD-40 repeat-containing protein MSI2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 766.1 bits (1977), Expect = 1.4e-217
Identity = 370/392 (94.39%), Postives = 370/392 (94.39%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
Sbjct: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEIIGAKTSGCEVYVFNC KQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPEIIGAKTSGCEVYVFNCGKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGI 373
           ISDFTWNAHQPWVIASVAEDNSVQVWQMAK I
Sbjct: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKAI 392

[Close]

BLAST of Carg05706 vs. ExPASy Swiss-Prot
Match: O22468 (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana OX=3702 GN=MSI2 PE=2 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 7.3e-158
Identity = 265/395 (67.09%), Postives = 310/395 (78.48%), Query Frame = 0


Query: 3   GEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVHK 62
           G++  G+ +V E+F++WKKN+P+LYDLLISH LEWPSLTV WVP  P P+ A+S   VHK
Sbjct: 5   GKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHK 64

Query: 63  LVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRARC 122
           L+LGTHTS    +FLMVADV+ P   +E  I    ++P +P+VEI Q+IRVDGEVNRARC
Sbjct: 65  LILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARC 124

Query: 123 MPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEGYL 182
           MPQ P ++GAKTSGCEV++F+ AK  AK+Q  ECDPDLRL GHDKEGYGLSWSPFKEGYL
Sbjct: 125 MPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYL 184

Query: 183 LSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL-- 242
           LSGS DQKICLWDVS+     VL+AM VYE HES + DVSWH+KNENLFGS G+D  L  
Sbjct: 185 LSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVI 244

Query: 243 ------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHT 302
                             VNY+SFNP+NEW+LATASSD+TV LFDLRKL  PLHV+SSH 
Sbjct: 245 WDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHE 304

Query: 303 EGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQ---DGDAEDGPPELLFSHGGHKA 362
             V++VEWDPNHETVLASSG+DRRLMVWDLN +G EQ   + DAEDGPPELLFSHGGHKA
Sbjct: 305 GEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKA 364

Query: 363 KISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           KISDF WN ++PWVIASVAEDNS+QVWQMA+ IYR
Sbjct: 365 KISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYR 399

[Close]

BLAST of Carg05706 vs. ExPASy Swiss-Prot
Match: O22469 (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana OX=3702 GN=MSI3 PE=1 SV=2)

HSP 1 Score: 546.2 bits (1406), Expect = 2.9e-154
Identity = 254/395 (64.30%), Postives = 308/395 (77.97%), Query Frame = 0


Query: 3   GEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVHK 62
           G+   G+D+V EEF+IWK+N+P+LYDL+ISH LEWPSLT+ WVP  P P+  +   AVHK
Sbjct: 6   GKDEAGLDQVEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHK 65

Query: 63  LVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRARC 122
           L+LGTHTS    +FLMVADV++P   +E  +    + PI+P+VEI QKIRVDGEVNRARC
Sbjct: 66  LILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARC 125

Query: 123 MPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEGYL 182
           MPQ P ++GAKTSG EV++F+ A+   K Q  ECDPDLRL GH++EGYGL+WS FKEGYL
Sbjct: 126 MPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYL 185

Query: 183 LSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLLV- 242
           LSGS DQ+ICLWDVS+ A   VL+ M+VYE H+S++ DV+WH+KNEN+FGS GDDC LV 
Sbjct: 186 LSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVI 245

Query: 243 -------------------NYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHT 302
                              NY+SFNP+NEW+LATASSD+TV LFDLRKL  PLHVLS H 
Sbjct: 246 WDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 305

Query: 303 EGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQ---DGDAEDGPPELLFSHGGHKA 362
             V++VEWDPNHETVLASSG+DRRLMVWD+N +G+EQ   + DAEDGPPELLFSHGGHKA
Sbjct: 306 GEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKA 365

Query: 363 KISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           KISDF WN  +PWVI+SVAEDNS+QVWQMA+ IYR
Sbjct: 366 KISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYR 400

[Close]

BLAST of Carg05706 vs. ExPASy Swiss-Prot
Match: O22467 (Histone-binding protein MSI1 OS=Arabidopsis thaliana OX=3702 GN=MSI1 PE=1 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-117
Identity = 213/405 (52.59%), Postives = 276/405 (68.15%), Query Frame = 0


Query: 4   EQNGGVDE--VMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVH 63
           E  G ++E  + EE+ IWKKN+P+LYDL+I+H+LEWPSLTV+W+P      P+    +V 
Sbjct: 7   EMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLP--DREEPSGKDYSVQ 66

Query: 64  KLVLGTHTSEEVPNFLMVADVILPVKASET--------RIDITGENPIMPEVEITQKIRV 123
           K++LGTHTSE  PN+LM+A V LP+  +E+        R +  G      +V+I Q+I  
Sbjct: 67  KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 126

Query: 124 DGEVNRARCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQ-GGECDPDLRLRGHDKEGYGL 183
           DGEVNRAR MPQNP II  KT   EVYVF+ +K  +K    G C+PDL+LRGH  EGYGL
Sbjct: 127 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 186

Query: 184 SWSPFKEGYLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFG 243
           SWS FK+G+LLSGS+D +ICLWD+++      LDA  +++AHE VV DV+WHL++E LFG
Sbjct: 187 SWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFG 246

Query: 244 SVGDDCLL-----------------------VNYVSFNPYNEWILATASSDTTVGLFDLR 303
           SVGDD  L                       VN ++FNP+NEW++AT S+D TV LFDLR
Sbjct: 247 SVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 306

Query: 304 KLAEPLHVLSSHTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQD-GDAEDGPP 363
           KL+  LH   SH E V++V W+P +ET+LAS    RRLMVWDL+ +  EQ   DAEDGPP
Sbjct: 307 KLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPP 366

Query: 364 ELLFSHGGHKAKISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIY 374
           ELLF HGGH +KISDF+WN  + WVI+SVAEDN +Q+WQMA+ IY
Sbjct: 367 ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409

[Close]

BLAST of Carg05706 vs. ExPASy Swiss-Prot
Match: O22466 (WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum OX=4081 GN=MSI1 PE=2 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 2.2e-117
Identity = 212/405 (52.35%), Postives = 275/405 (67.90%), Query Frame = 0


Query: 4   EQNGGVDE--VMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVH 63
           E  G ++E  + EE+ IWKKN+P+LYDL+I+H+LEWPSLTV+W+P      P+    +V 
Sbjct: 7   EMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLP--DREEPSGKDYSVQ 66

Query: 64  KLVLGTHTSEEVPNFLMVADVILPVKASET--------RIDITGENPIMPEVEITQKIRV 123
           K++LGTHTSE  PN+LM+A V LP++ +E         R +  G      +V+I Q+I  
Sbjct: 67  KMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINH 126

Query: 124 DGEVNRARCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQ-GGECDPDLRLRGHDKEGYGL 183
           DGEVNRAR MPQNP II  KT   EVYVF+ +K  +K    G C+PDLRLRGH  EGYGL
Sbjct: 127 DGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGL 186

Query: 184 SWSPFKEGYLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFG 243
           SWS FK+G+LLSGS+D  ICLWD+++      L+AM +++ HE VV DV+WHL++E LFG
Sbjct: 187 SWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIFKVHEGVVEDVAWHLRHEYLFG 246

Query: 244 SVGDDCLL-----------------------VNYVSFNPYNEWILATASSDTTVGLFDLR 303
           SVGDD  L                       VN ++FNP+NEW++AT S+D TV LFDLR
Sbjct: 247 SVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 306

Query: 304 KLAEPLHVLSSHTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQ-DGDAEDGPP 363
           K++  LH L  H E V++V W+P +ET+LAS    RRLMVWDL+ +  EQ   DAEDGPP
Sbjct: 307 KISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPP 366

Query: 364 ELLFSHGGHKAKISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIY 374
           ELLF HGGH +KISDF+WN  + WV+ASVAEDN +Q+WQMA+ IY
Sbjct: 367 ELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIY 409

[Close]

BLAST of Carg05706 vs. ExPASy Swiss-Prot
Match: Q10G81 (Histone-binding protein MSI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=MSI1 PE=2 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.2e-114
Identity = 208/395 (52.66%), Postives = 266/395 (67.34%), Query Frame = 0


Query: 12  VMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVHKLVLGTHTSE 71
           + EE+ IWKKN+P+LYDL+I+H+LEWPSLTV W+P      PA    +V K+VLGTHTS+
Sbjct: 21  INEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLP--DRAEPAGKDHSVQKMVLGTHTSD 80

Query: 72  EVPNFLMVADVILPVKASET--------RIDITGENPIMPEVEITQKIRVDGEVNRARCM 131
             PN+LM+A V LP+  +E           +I G      +V+I Q+I  DGEVNRAR M
Sbjct: 81  NEPNYLMLAQVQLPLDDAEADARHYDDDHAEIGGFGAASGKVQIVQQINHDGEVNRARYM 140

Query: 132 PQNPEIIGAKTSGCEVYVFNCAKQGAKAQ-GGECDPDLRLRGHDKEGYGLSWSPFKEGYL 191
           PQN  II  KT   EVYVF+ +K  +K    G C+PDLRL+GH+ EGYGLSWS FKEG+L
Sbjct: 141 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKGHNSEGYGLSWSIFKEGHL 200

Query: 192 LSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL-- 251
           LSGS+D +ICLWD+ + +    LDA+ +++ H+ VV DV+WHL++E LFGSVGDD  L  
Sbjct: 201 LSGSDDAQICLWDIKANSKNKTLDALQIFKYHDGVVEDVAWHLRHEYLFGSVGDDHNLLI 260

Query: 252 ---------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLS 311
                                VN ++FNP+NEW++AT S+D TV LFDLRK+   LH   
Sbjct: 261 WDLRSPVSTKPVQSVAAHQGEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKIDTSLHTFD 320

Query: 312 SHTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQ-DGDAEDGPPELLFSHGGHK 371
            H E V++V W P +ET+LAS    RRLMVWDL+ +  EQ   DAEDGPPELLF HGGH 
Sbjct: 321 CHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDQEQTPEDAEDGPPELLFIHGGHT 380

Query: 372 AKISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIY 374
           +KISDF+WN  + WVIASVAEDN +Q+WQMA+ IY
Sbjct: 381 SKISDFSWNPCEDWVIASVAEDNILQIWQMAENIY 413

[Close]

BLAST of Carg05706 vs. ExPASy TrEMBL
Match: A0A6J1ERG6 (WD-40 repeat-containing protein MSI2-like OS=Cucurbita moschata OX=3662 GN=LOC111435201 PE=3 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 7.0e-220
Identity = 373/394 (94.67%), Postives = 373/394 (94.67%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
Sbjct: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPD RLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDSRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR
Sbjct: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 394

[Close]

BLAST of Carg05706 vs. ExPASy TrEMBL
Match: A0A6J1JNA2 (WD-40 repeat-containing protein MSI2-like OS=Cucurbita maxima OX=3661 GN=LOC111486240 PE=3 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 1.2e-219
Identity = 371/394 (94.16%), Postives = 374/394 (94.92%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
Sbjct: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSE+VPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEDVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEI+GAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPEIVGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDF+WNAHQPWVIASVAEDNSVQVWQMAKGIYR
Sbjct: 361 ISDFSWNAHQPWVIASVAEDNSVQVWQMAKGIYR 394

[Close]

BLAST of Carg05706 vs. ExPASy TrEMBL
Match: A0A6J1I028 (WD-40 repeat-containing protein MSI2-like OS=Cucurbita maxima OX=3661 GN=LOC111468476 PE=3 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 5.4e-204
Identity = 343/394 (87.06%), Postives = 364/394 (92.39%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MA EQ GGVDEV+EEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVP APFPH AN SLAV
Sbjct: 1   MAEEQAGGVDEVVEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPSAPFPHQANPSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSE+VPN+LMVAD ILPVKASETRIDI+ ENPIMP++EITQKIRV+GEVNRA
Sbjct: 61  HKLVLGTHTSEDVPNYLMVADSILPVKASETRIDISRENPIMPKIEITQKIRVEGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQN +I+GAKTSGCEVYVFNCAKQGAKAQG ECDPDLRLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNVQIVGAKTSGCEVYVFNCAKQGAKAQGAECDPDLRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAM+VYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMHVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWI+ATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWIVATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGV++VEWDPNHETVLASSGDDRRLMVWDLN++G+EQDG+AEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVFQVEWDPNHETVLASSGDDRRLMVWDLNSIGSEQDGEAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDF+WN+H+PWVI+SVAEDNSVQVWQMAK IYR
Sbjct: 361 ISDFSWNSHEPWVISSVAEDNSVQVWQMAKSIYR 394

[Close]

BLAST of Carg05706 vs. ExPASy TrEMBL
Match: A0A6J1GKA6 (WD-40 repeat-containing protein MSI2-like OS=Cucurbita moschata OX=3662 GN=LOC111455143 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 5.9e-203
Identity = 341/394 (86.55%), Postives = 362/394 (91.88%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MA EQ GGVDEV+EEFAIWKKNSPYLYDLLISHSLEWPSLTVDWV  APFPH AN SLAV
Sbjct: 1   MAEEQAGGVDEVVEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVQSAPFPHQANPSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSE+VPN+LMVAD ILPVKASETRIDI+ ENPIMP++EITQKIRV+GEVNRA
Sbjct: 61  HKLVLGTHTSEDVPNYLMVADCILPVKASETRIDISEENPIMPKIEITQKIRVEGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNP+I+GAKTSGCEVYVFNCAKQGAKAQG ECDPDLRLRGHDKEGYGLSWSPFKEG
Sbjct: 121 RCMPQNPQIVGAKTSGCEVYVFNCAKQGAKAQGDECDPDLRLRGHDKEGYGLSWSPFKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGSNDQKICLWDVSSMADKNVLDAM+VYEAHESVVGDVSWHLKNENLFGSVGDDCLL
Sbjct: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMHVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWI+ATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWIVATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           H EGV++VEWDPNHETVLASSGDDRRL+VWDLN++G+EQDG+AEDGPPELLFSHGGHKAK
Sbjct: 301 HAEGVFQVEWDPNHETVLASSGDDRRLIVWDLNSIGSEQDGEAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDF+WN H+PWVI+SVAEDNSVQVWQMAK IYR
Sbjct: 361 ISDFSWNTHEPWVISSVAEDNSVQVWQMAKSIYR 394

[Close]

BLAST of Carg05706 vs. ExPASy TrEMBL
Match: A0A6J1C2X2 (WD-40 repeat-containing protein MSI2-like OS=Momordica charantia OX=3673 GN=LOC111007876 PE=3 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 1.9e-201
Identity = 336/394 (85.28%), Postives = 360/394 (91.37%), Query Frame = 0


Query: 1   MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV 60
           MAGE +GGVDEV+EEFAIWKKNSPYLYDL+ISHSLEWPSLTVDWVP APFPH AN SLAV
Sbjct: 1   MAGEADGGVDEVVEEFAIWKKNSPYLYDLIISHSLEWPSLTVDWVPSAPFPHQANPSLAV 60

Query: 61  HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA 120
           HKLVLGTHTSE+VPNFL+VAD ILP+KASETRID TGENPI+P++EITQ+IRVDGEVNRA
Sbjct: 61  HKLVLGTHTSEDVPNFLVVADAILPIKASETRIDATGENPIIPKIEITQRIRVDGEVNRA 120

Query: 121 RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG 180
           RCMPQNPEI GAKTSGCEVYVFNC+KQGAKAQG EC+PDLRLRGHDKEGYGLSWSP KEG
Sbjct: 121 RCMPQNPEIFGAKTSGCEVYVFNCSKQGAKAQGAECEPDLRLRGHDKEGYGLSWSPXKEG 180

Query: 181 YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL 240
           YLLSGS+DQKICLWDVSSMA+KNVLDA+++YEAHESVVGDVSWHLKNENLFGSVGDDC L
Sbjct: 181 YLLSGSHDQKICLWDVSSMAEKNVLDAIHIYEAHESVVGDVSWHLKNENLFGSVGDDCQL 240

Query: 241 --------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300
                               VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
Sbjct: 241 VIWDLRTNQAVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS 300

Query: 301 HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK 360
           HTEGVY+VEWDPNHETVLASSGDDRRLMVW+L ++GNEQDGDAEDGPPELLFSHGGHKAK
Sbjct: 301 HTEGVYQVEWDPNHETVLASSGDDRRLMVWELKSIGNEQDGDAEDGPPELLFSHGGHKAK 360

Query: 361 ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           ISDF+WN  +PWVI+SVAEDNSVQVWQMAK IYR
Sbjct: 361 ISDFSWNREEPWVISSVAEDNSVQVWQMAKSIYR 394

[Close]

BLAST of Carg05706 vs. TAIR 10
Match: AT2G16780.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 558.1 bits (1437), Expect = 5.2e-159
Identity = 265/395 (67.09%), Postives = 310/395 (78.48%), Query Frame = 0


Query: 3   GEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVHK 62
           G++  G+ +V E+F++WKKN+P+LYDLLISH LEWPSLTV WVP  P P+ A+S   VHK
Sbjct: 5   GKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHK 64

Query: 63  LVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRARC 122
           L+LGTHTS    +FLMVADV+ P   +E  I    ++P +P+VEI Q+IRVDGEVNRARC
Sbjct: 65  LILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARC 124

Query: 123 MPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEGYL 182
           MPQ P ++GAKTSGCEV++F+ AK  AK+Q  ECDPDLRL GHDKEGYGLSWSPFKEGYL
Sbjct: 125 MPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYL 184

Query: 183 LSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL-- 242
           LSGS DQKICLWDVS+     VL+AM VYE HES + DVSWH+KNENLFGS G+D  L  
Sbjct: 185 LSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVI 244

Query: 243 ------------------VNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHT 302
                             VNY+SFNP+NEW+LATASSD+TV LFDLRKL  PLHV+SSH 
Sbjct: 245 WDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHE 304

Query: 303 EGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQ---DGDAEDGPPELLFSHGGHKA 362
             V++VEWDPNHETVLASSG+DRRLMVWDLN +G EQ   + DAEDGPPELLFSHGGHKA
Sbjct: 305 GEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKA 364

Query: 363 KISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           KISDF WN ++PWVIASVAEDNS+QVWQMA+ IYR
Sbjct: 365 KISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYR 399

[Close]

BLAST of Carg05706 vs. TAIR 10
Match: AT4G35050.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 546.2 bits (1406), Expect = 2.0e-155
Identity = 254/395 (64.30%), Postives = 308/395 (77.97%), Query Frame = 0


Query: 3   GEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVHK 62
           G+   G+D+V EEF+IWK+N+P+LYDL+ISH LEWPSLT+ WVP  P P+  +   AVHK
Sbjct: 6   GKDEAGLDQVEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHK 65

Query: 63  LVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRARC 122
           L+LGTHTS    +FLMVADV++P   +E  +    + PI+P+VEI QKIRVDGEVNRARC
Sbjct: 66  LILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARC 125

Query: 123 MPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEGYL 182
           MPQ P ++GAKTSG EV++F+ A+   K Q  ECDPDLRL GH++EGYGL+WS FKEGYL
Sbjct: 126 MPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYL 185

Query: 183 LSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLLV- 242
           LSGS DQ+ICLWDVS+ A   VL+ M+VYE H+S++ DV+WH+KNEN+FGS GDDC LV 
Sbjct: 186 LSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVI 245

Query: 243 -------------------NYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSSHT 302
                              NY+SFNP+NEW+LATASSD+TV LFDLRKL  PLHVLS H 
Sbjct: 246 WDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 305

Query: 303 EGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQ---DGDAEDGPPELLFSHGGHKA 362
             V++VEWDPNHETVLASSG+DRRLMVWD+N +G+EQ   + DAEDGPPELLFSHGGHKA
Sbjct: 306 GEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKA 365

Query: 363 KISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR 375
           KISDF WN  +PWVI+SVAEDNS+QVWQMA+ IYR
Sbjct: 366 KISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYR 400

[Close]

BLAST of Carg05706 vs. TAIR 10
Match: AT5G58230.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-118
Identity = 213/405 (52.59%), Postives = 276/405 (68.15%), Query Frame = 0


Query: 4   EQNGGVDE--VMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVH 63
           E  G ++E  + EE+ IWKKN+P+LYDL+I+H+LEWPSLTV+W+P      P+    +V 
Sbjct: 7   EMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLP--DREEPSGKDYSVQ 66

Query: 64  KLVLGTHTSEEVPNFLMVADVILPVKASET--------RIDITGENPIMPEVEITQKIRV 123
           K++LGTHTSE  PN+LM+A V LP+  +E+        R +  G      +V+I Q+I  
Sbjct: 67  KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 126

Query: 124 DGEVNRARCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQ-GGECDPDLRLRGHDKEGYGL 183
           DGEVNRAR MPQNP II  KT   EVYVF+ +K  +K    G C+PDL+LRGH  EGYGL
Sbjct: 127 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 186

Query: 184 SWSPFKEGYLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFG 243
           SWS FK+G+LLSGS+D +ICLWD+++      LDA  +++AHE VV DV+WHL++E LFG
Sbjct: 187 SWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFG 246

Query: 244 SVGDDCLL-----------------------VNYVSFNPYNEWILATASSDTTVGLFDLR 303
           SVGDD  L                       VN ++FNP+NEW++AT S+D TV LFDLR
Sbjct: 247 SVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 306

Query: 304 KLAEPLHVLSSHTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQD-GDAEDGPP 363
           KL+  LH   SH E V++V W+P +ET+LAS    RRLMVWDL+ +  EQ   DAEDGPP
Sbjct: 307 KLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPP 366

Query: 364 ELLFSHGGHKAKISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIY 374
           ELLF HGGH +KISDF+WN  + WVI+SVAEDN +Q+WQMA+ IY
Sbjct: 367 ELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409

[Close]

BLAST of Carg05706 vs. TAIR 10
Match: AT2G19520.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 196.4 bits (498), Expect = 4.0e-50
Identity = 136/437 (31.12%), Postives = 201/437 (46.00%), Query Frame = 0


Query: 2   AGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVH 61
           +G++      V E+++ WK   P LYD L +H+L WPSL+  W P        N      
Sbjct: 54  SGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNR----Q 113

Query: 62  KLVLGTHTSEEVPNFLMVA--DVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNR 121
           +L L   T   VPN L++A  +V+ P  A+   I    E    P V+  + I   GEVNR
Sbjct: 114 RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNR 173

Query: 122 ARCMPQNPEIIGAKTSGCEVYVFNCAKQ---GAKAQGGECDPDLRLRGH-DKEGYGLSWS 181
            R +PQN +I+   T   +V +++   Q    A        PDL L GH D   + L+  
Sbjct: 174 IRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMC 233

Query: 182 PFKEGYLLSGSNDQKICLWDVSSM---------------------ADKN---VLDAMNVY 241
           P  E ++LSG  D+ + LW +                         DKN    +    VY
Sbjct: 234 P-TEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVY 293

Query: 242 EAHESVVGDVSWHLKNENLFGSVGDD-CLL---------------------VNYVSFNPY 301
             HE  V DV++   +   F SVGDD CL+                     ++ V +NP+
Sbjct: 294 HGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPH 353

Query: 302 NEWILATASSDTTVGLFDLRKL-----AEPLHVLSSHTEGVYEVEWDPNHETVLASSGDD 361
           ++ ++ T S+D TV LFD RKL       P++    H   V  V+W P+  +V  SS +D
Sbjct: 354 DDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAED 413

Query: 362 RRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAKISDFTWNAHQPWVIASVAED---- 375
             L +WD + +  + D  A+  P  L F H GH+ K+ DF WNA  PW I SV++D    
Sbjct: 414 GLLNIWDYDRVSKKSDRAAK-SPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETT 473

[Close]

BLAST of Carg05706 vs. TAIR 10
Match: AT4G29730.1 (nucleosome/chromatin assembly factor group C5 )

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-43
Identity = 122/425 (28.71%), Postives = 192/425 (45.18%), Query Frame = 0


Query: 12  VMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAVHKLVLGTHTSE 71
           V + ++ WK   P LYD  ++H+L WPSL+  W      P    +     +L L   T+ 
Sbjct: 54  VDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRW-----GPQLEQAGSKTQRLYLSEQTNG 113

Query: 72  EVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRARCMPQNPEIIG 131
            VPN L++A+        ET      E    P V+  + I   GEVNR R +PQN +I+ 
Sbjct: 114 SVPNTLVIAN-------CETVNRQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVA 173

Query: 132 AKTSGCEVYVFNCAKQG---AKAQGGECDPDLRLRGH-DKEGYGLSWSPFKEGYLLSGSN 191
             T   ++ ++N   Q    A     +  PDL L GH D   + L+  P  E ++LSG  
Sbjct: 174 THTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCP-TEPFVLSGGK 233

Query: 192 DQKICLWDVSSM---------------------ADKN---VLDAMNVYEAHESVVGDVSW 251
           D+ + LW++                        +DK     +    +Y  H+  V DV++
Sbjct: 234 DKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDTVEDVAF 293

Query: 252 HLKNENLFGSVGDD-CLL---------------------VNYVSFNPYNEWILATASSDT 311
              +   F SVGDD CL+                     ++ V +NP++  ++ T S+D 
Sbjct: 294 CPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADN 353

Query: 312 TVGLFDLRKL-----AEPLHVLSSHTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMG 371
           TV +FD R L       P++    H   V  V+W P+  +V  SS +D  L +WD + +G
Sbjct: 354 TVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVG 413

Query: 372 NEQDGDAEDGPPELLFSHGGHKAKISDFTWNAHQPWVIASVAED-------NSVQVWQMA 375
            + +  A   P  L F H GH+ K+ DF W+   PW I SV+++        ++Q+W+M+
Sbjct: 414 KKSE-RATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCESIGGGGTLQIWRMS 464

The following BLAST results are available for this feature:

BLAST of Carg05706 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015274.1	7.4e-224	100.00	WD-40 repeat-containing protein MSI2 [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023529712.1	1.4e-219	94.67	WD-40 repeat-containing protein MSI2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928345.1	1.4e-219	94.67	WD-40 repeat-containing protein MSI2-like [Cucurbita moschata]	[more]
XP_022989054.1	2.5e-219	94.16	WD-40 repeat-containing protein MSI2-like [Cucurbita maxima]	[more]
KAG6589011.1	1.4e-217	94.39	WD-40 repeat-containing protein MSI2, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Carg05706 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22468	7.3e-158	67.09	WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana OX=3702 GN=MSI2 PE=...	[more]
O22469	2.9e-154	64.30	WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana OX=3702 GN=MSI3 PE=...	[more]
O22467	1.7e-117	52.59	Histone-binding protein MSI1 OS=Arabidopsis thaliana OX=3702 GN=MSI1 PE=1 SV=1	[more]
O22466	2.2e-117	52.35	WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum OX=4081 GN=MSI1 PE=...	[more]
Q10G81	2.2e-114	52.66	Histone-binding protein MSI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Carg05706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERG6	7.0e-220	94.67	WD-40 repeat-containing protein MSI2-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JNA2	1.2e-219	94.16	WD-40 repeat-containing protein MSI2-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1I028	5.4e-204	87.06	WD-40 repeat-containing protein MSI2-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GKA6	5.9e-203	86.55	WD-40 repeat-containing protein MSI2-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1C2X2	1.9e-201	85.28	WD-40 repeat-containing protein MSI2-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Carg05706 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16780.1	5.2e-159	67.09	Transducin family protein / WD-40 repeat family protein	[more]
AT4G35050.1	2.0e-155	64.30	Transducin family protein / WD-40 repeat family protein	[more]
AT5G58230.1	1.2e-118	52.59	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G19520.1	4.0e-50	31.12	Transducin family protein / WD-40 repeat family protein	[more]
AT4G29730.1	2.1e-43	28.71	nucleosome/chromatin assembly factor group C5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 298..312 score: 37.06 coord: 182..196 score: 41.24 coord: 254..268 score: 37.5
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 155..195 e-value: 3.1E-5 score: 33.4 coord: 227..267 e-value: 2.1 score: 14.9 coord: 327..367 e-value: 0.0015 score: 27.8 coord: 271..311 e-value: 5.6E-7 score: 39.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 273..311 e-value: 9.2E-6 score: 26.3 coord: 331..366 e-value: 0.0079 score: 17.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 278..314 score: 13.449252
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 162..204 score: 11.544415
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 334..374 score: 9.171722
IPR022052	Histone-binding protein RBBP4, N-terminal	PFAM	PF12265	CAF1C_H4-bd	coord: 14..85 e-value: 5.3E-24 score: 84.3
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 241..374 e-value: 5.0E-48 score: 166.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 4..240 e-value: 4.1E-62 score: 212.5
None	No IPR available	PANTHER	PTHR22850	WD40 REPEAT FAMILY	coord: 4..241
None	No IPR available	PANTHER	PTHR22850:SF196	WD-40 REPEAT-CONTAINING PROTEIN MSI2-RELATED	coord: 241..374
None	No IPR available	PANTHER	PTHR22850:SF196	WD-40 REPEAT-CONTAINING PROTEIN MSI2-RELATED	coord: 4..241
None	No IPR available	PANTHER	PTHR22850	WD40 REPEAT FAMILY	coord: 241..374
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 334..374 score: 9.09833
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 162..198 score: 9.54651
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 278..314 score: 11.154684
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 298..312
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 182..196
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 109..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05706-RA	Carg05706-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding
molecular_function	GO:0005515	protein binding