Carg05587 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05587
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LINE-1 retrotransposable element ORF2 protein
Location	Carg_Chr17: 2465421 .. 2478003 (-)
RNA-Seq Expression	Carg05587
Synteny	Carg05587

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTGGTCAGGCTTCACCACTTCGATCCTCTTATGGAAGCAACCTCCATACTGGCTCAAATTTCTAATGAAGCTGACCTGAAATTCTCGTCATCGAAGTTCTCCCTAATTACCTCGTACCCTTCCCGTCGCTTCGTCGCAACATTTCAAATCTCGCACCGTTTCTTCGCCAACTATTTCGTCGATCGGAATCACAGTTCAAGGGTTTCCCTCCAATCCTTCTATAATGCCATGTACGCTGGTATAGTTTTTTCTTCAATGACCATTCATTTTCCAGAAACAACAAGCCGCATGGTCCTTCAATTTGAGTCTTCAAGTTAGTATATAACCAAAATCTTTGCCATTTCTTGATGAATCTTGGCTCCCACTTAATTGTTGATATCACTTTTAGATCATACGAGGATGCAAATGCATCGTGTGTTAAAACTATCACCTTCTCAAGAGGAGGAATTAGGCCAAATTCAACATGATCGATATTTCTCTATCATTTCACAAGATTTTAGAGACATCATAACAGGATTACCCTCGTTCCCAAATAATTCAAGTAATCACCAATTCTTCTTTTGGGTTACATATTTACATGCAAGAACTAAAATCTTGTCTATTTACCTCAGTTTTCGTTAGTCTAACGAGTTCACGAGTCAAGTTTTGTTGGGCTTCAGAAGAAAGAATTCTTACAAAAGAGGTATTGTTTACGGATCTCCACAATCATATGATATTTGTTTACTCTTTGGAATCCTCGAACAGCCTCCCATTAATCGAGGCTTGACTCCTTTCTTTGAAATCCTCGAACAAAATACTTTCTTTATTCGAAATATGAGTCACTTTTGACTACACCTTCGAGGCTAGAATTCTTACCAAAGAGATATTGTTCACAAGATAATATCACAAGATTTTTAGGAATCACTGATCTCCACAATGATATAATTTTATTCACATTGAGTCTGAGGCCTATGAAGCCCTCGATAGCCTCCCCTTAATCGAGAGTCTGAGTTCTATGGAGCCCTCAAACAGCCTCCCCTTAATCGAGAGTCTGAGGCCTATGGAGCCCTCGATAGCCTCCCCTTAATCGAGAGTCTGAGTTCTATGGAGCCCTCAAACAGCCTCCCCTTAATCGAGAGTCTGAGGCCTATGGAGCCCTCGATAGCCTCCCCTTAATCGAGAGTCTGAGGCCTATGAAGCCCTAGAATAGCCTCCCCTCCATCGAGAGTCTGAGGCCTATGGAGCCCTCGAATAGCCTCCCCTTCATCGAGAGTCTGTTGCCTATGGAGCCCTCGAACAGTCTCCTCTTAATCGAGAGTCTGAGGCCTGTGGAGCCCTTGAACAGCCTCCCCTTCATCGAGAGTCTAAGGCCTATGGAGCCCTCGAACAGTCTCCCCTTAATCGAGAGTTTAAGGCCTATGGAGCCCTCGAACAGCCTCCCCTTAATCGAGAGTCTGAGGCTTATGGAGCCCTCGAGCAGTCTCCCCTTAATCGAGAGTCTGAGGCATATGGAGCCCTCGAACAGCCTCCCCTTAATCGAGAGTCTGAGGCCTATGGAGCCCTCGAACAGCCCTCCCCCCCTCCCCCTTCATCGAGAATCTGAGGCCTATGGAGCTCTCGAATAGCCTCCCTCCATTGAAAATCTGAGGCCTATGGAGCCCTTGAACAACCTCCCCCTTAATCGAGACTCGACTCCTTTCTTTGGAGCTCCTGAACAAAGTACACCCTTTGTTCGACACATGAGTCACTTTTGACATGGCTAAATTAAGGGCATGACTAGGATACTAGGTTAGGAATCACGGATCTTCACAATGGTATGATACTGTCCACTTTGAGCATAAGCTCTCATGGCTTTATTCCCTAATTCATGATCGTTCCCTTAATTAGCTAACGTGTCACTCCATCCCAATCATCCTCAACAAATATAATTTAAATGAGTTCTTGATCGATGTTTTTCAGGGTGGACGATGCGTAATTGTAGGTTATGAAGGGCAAGCTGAAATTGTATTTCAAATCAATCTCAATCCCAAGTGGTTTTTCTATAATTTGAGTTATGGAGCATATAGAATATGGTTTTACAAGACAATTGATTCTCGTTGTGTAATCTTTGTCCCAGCCTTTGGATTGAATGCCCAATATGTGATCTACTTTTCCTAAATGCTCATATCAAAGGATGAAGAATGATATTCTCAATTATGAACAAAACTTACAAAAGTTCTTCATAAGTAATGGCTCGTTCGACAATCATTTTGTGGACTCGGTTTTGGCTGTTTTCAATTATTTTTCGAGCTGTTTTAAGAGACTTGGTATTGAAATGTGGTGTAACGACACATTTTTCGAGAAATTCGAACCAAAGATGGCTACTAATTGATGCAACATTTGAACACGACATGACAATTTGAATCAATTGGAAAAGTAGACGTTGGGGAACATGTTTCAAAACATTATATTAAAACATGAACAAGAAAATCATTGAGTTAGAAATCAAGACTTTAAGTTCAATGACATTAAGTTCTCTCTAGCCCTTTTAAGCTCATTGAGTTCTAAACCCTATCCACACCTATTCCATGGGTGTAAGTAAGTCCCTCAGGGTCTTAAAATATCAAGTAGGGGCATTTTTGTCAATTATCATACTACTTAATTTACTTGTCAAACGACAAAATAACGGAAGCTCTCTACTCCTGTTTGGCTCTTTATGGCACCTGCTCCAGATATGCTCTCATCCTTGATTAGCAATTACATGTTGAGATGGCCAATTTGATCTAAGGTGTTAGATTAATGCATTCATCACATTTCCCAAAAGAGTTCAATTGATGACGTTTTTTTTATTTTGAACGAGCACCAACGGGACGTGCAGAAAAAGTTCTCTCTCATTTTGGCCTCTTACTACTATACTCGCTAGAGGCTGTTTTAAGCATTCTATAACATTAAGTTCAAGTAGGGGCATTTTCGTAATTTATCATACTACTTAATTTAATTGTCAACCGACAAAATAACGGAGGCTCTCAACCCTAGTTTGGCTTTTTATGACACGTGCTCCAAATCTGCTCTCACTCTTGATTAGCAATAATATGTTGTATGATCCGAGGCTCTCTATGGCACGTGCTCCAGATCTGCTCTCAACCTTAATTAGCAAATATATGTTGAGATGGCCGAGTTGGTCTAAGGCACCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTACAAATCCCACTCTCAACAATGATGTGTTAGAAAAGTCAAGTAAGACATTTTTGTCATTTATCATAATATACTTAATTGAATTGTGGATCGACAATATATCAGAGGCTCTCTATGGCACGTGCTCCAGCTCTCAGCCTTGATTAGCAAATATATGTTAAGATGGCCGAGTTGGTTTAAGGCTTTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATGATGTTAGAATGGTGAAGTAGGACATTTTTGTCATTTATCATGATTAAGGTTCTAGTTCGAAAGTGCGTGGGTTCAAATCCCAAAATCCCATCCCACTCTCAACAATGATGTTAGAATGGTGAAGTAGGACATTTTTGTCATTTATCATAATATACTTAATTGAATGGTTGAGTCTAATAGACGTCATACTCTCCTAACAAATTTTATGAGATAACGCTCCAACCCAAAATATCGGTCATTCACTGTTGTGGCTATGCAAACTGGCGAAGTCCAAAGAACATAAAAGCTAGTTCCAATTCTACATTTTTTTAGGTGTCTGATGACTACCGATCAAGGTGGAGAACATTCGAGACCTACACGGTCAGAGAGAAATTCGTCTCGGGTGTCAATCTTTTATTGGTTTAAAATTGTGAATAGATTTTTAAAAAAAAATATGATTCTTGATTAGGTTTAAAAGGGGGTGAGTACAAAACTTGATTTGCTTTAAAAGCCATTTGTTTGATTTTTGAAGAATGCTAAAATTGAAAGGCTTTGAACATTCTCACATTACCACCACCATGTTCTTGGTCAAGCTTGAGGATGTTACTCCTCTTTCAGACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTTAACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCGGAATATTCAGTCGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAACTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGGTAATATCTTGATATCATTCTTGTTTCATCTTGATATCATTCTTCATTGATCTTGATATCATTCTTGGTTGATCATGATATCAATCTTGGAATATCAGCTTCTCCCAATGCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACATTATAAGAGAAGTATCTTCATTCCCAAATGATCCAAGTAATCAAACTCTTTGTTTTTGTTCATATTTACTTCAAAGAAAGTGGGTTTATGGTTTAATTGATAAAGTTGTCTGATTCTCACAGTTCGTGTTACTCTAACTCATTTACAAGTCAAATTCTCTGTTGCATCCAAGGAAATTATTCTTACTAAACAGGTAACGAATGTTCAAATTTCGTTTCCGAGTTATTTTTGGGTCAACTTTTTTCATTTCTCGAACGAACCCTTTTGGGATGTTCAGTAGAAAAACACTTTCAAGTGGTTTTGTTCTCGAGCCATTTTTTAGGTCATTTTCTATAGCGACTTTTTTCATTTCTCAAACGAACCTTTTTGAGACGTTCAGTAGAAAAATACATTGGAGTGTTCTCGGGCCATTTTTTGGGTCGTTTTCTATAGCGATTTTTTTCATTTTCGGAATGAGCTCTATTGGAACGTTCAAAAAAGTGGTTTTTTATTTCTTACTATATTCATTAGAAAGGAAACTATTCTTACTAGAGACGTCATGAATGTTCAAATTCCATTTCCCGGTTTATTTTTTGGTCAAGTTTTTTTCATTTCTCAAACGAACCCTATTGAGACATTCAATAGAAAAACACCTTGAAATGGTTTTGTTCTCAGGCCATTTTTTAGGCCATTTCTCGAAGGAGCACTATTGGAACGTTCAAAAAAAAGCCGTTTAACAAGCTAATATGATTTTGTTGATGTTGTGCAGGCTCGAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGGTTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGGTCTATTTTCCTCATGATAGGGAAAATATTATATACACAAATGGAGTATCCTAGTCTATCATCAATCTTTTCTTTAGCTTATTTGCTACTTTTGTCATATATTCAACACTCGTTAATTTGAGATATTGAAGGTCGAGATAATATGGTTGGGGTGCTAGTGTCGAGGCACTACGAACATCTCTAAAACGACCCACGTAAACAATTGACATAACTCAACTAGTTATAACCATTAAAGGTTTTGGGAACGAAGAGGTTTTTTTTTTAATTCTTGAATCAAATTCAACTTTCAATTCAATTATTTACGGTTCTTCTCCACCACCACCGTTGGCTTTGATGCTGCAGGAGCAATCGTCATGGCTGCTGCAGGCGGAGACGATTGATTACTCTTCGGCTCCACCCTATTGACCTCCAAATCACCTTTTGTTATATTCTGTACATACAACCTCACATTCTCCAATATAATCGTTTTCCTCTTGGCCAACATAGACTCTCTCATTTTCTTCCCAATCAACCTTTCATCCTTCATAGAAATCCTAACCTCAGAATCCTCATGAGTGTTCCCATCGAAAATATACAGAATCTCGAGAAACCTATTAATCTTCTGCAGAGATTTACCTTTGGAATCTAGGCGCCGCACTAGCCTCTTCGCCAACCAAGTTGCCGATGCCCTTCTCGCCAAAATTGGCTCCTTCACCTAATGTGGCGACTCTTCCGGCTGCCCTTCTCGCCAAAATTGGCCCCTTCGCCCAATGTGGTGACTCTTCCGGCTTCAACATTGTCTTTGTCCCTTGCTCTAGGTTTTCCCCTTCTACTTCTTAGGTTAAGACATATTCTCGCCGAAGCCAAGGTAGCATCGTCGTTGAGCGATGATCCCTCTACAGCTTTTTATGGCCAAGAAAGTGTTTCTCTATACCTCCTCCGAACCAGGTTGTTGACATTTTCACGAAAATTGTTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTCACGTTCGTTCAAATCCGACGTTCAGCTTGTGGAGGGGTGTTAAGGATATTCAGTACTAAATTATAGTTTACCATATATATCATATTTGATATTTTATTATAAGGCAAATATCTACTTACATAGGTATCTTTCTATATAATGTTCTTTTCATTTATTACTATTTTCATATTCTTGTAATTTATTTTATTATAAATAAATAACTTTCACCCACCATTTAGATATGGTGGTTTCAGCAAATATTTTAATCGATAAATGTTTTAGGAAAAAAAAAATTAATATTTTAGGAATAAAGATACTTATCGAGTTTAAGAATAAATCTAGGTCACAATGTGGGGTCTTTAGTGTAAATATCTCTCCACCCCACTAAGTTATTCCTAAATAATCTCAAGCAAAATAAAGTGTAATAGTTTCTAGACAGTGTCTTATAATCTCTTCTTGATTAGTTTTAATACAAGTGTGAGTTTCCCAAGAGTAGGTTGTCTGATCTTTTGAAATTCTTAATACGCTCTATGGTTGTAGCTTTACCTAATCTTCCACATCAAAAACAAATTCTTGAGATTATACGTGAATGAGTTTTTTCATGTTGTGAGTAGCTCGTGACTCTACAAGTTTTGTGTTGAAAAGCTTGCTTGGTATTACTAAGGTACTACTAACACGATGGATGAACTCGAAATCATCGAAGAAATCAAGAAACTCAACACCAACAACTACATGACGTGGGAAACATGCATAATGTCCTAACTATGCCACCAGAGTTGTTTCCTAATGGCACAAACAAGACAATGTTTGCCTTGAAACTACAGTTGAAGAAGAAGAAGAGATGTTGGAGCACATTTAGGATGACCAAAAGAAGCATGGAACACGTTCGTGAAGAGCATATTTTGCTTTTCTTAAAAAAAGAACGATACGAGGTTACAACTTCTAGAGAACGAGCTATTATCAACCTCACAACATGACATAATGATTGCTTAATACTTCTATAGAGTCCAAGTTGATCTATCGGGAGACTACTGAACTAAATCTTAAGTTCATAATTGGAGAAGCTCAAATGAAGAGGATCATCATCCATATATTGCGACTAGAATATAGAAGGTTCATTTGCTATACAAGAATGACATGTCAAACTGTTAGGTTATGGAGCCTGTTGCTTATTTATAGCTTGGTTAACGGTTATATCCGGTAAAACTATATTTGGTAAAGCTATATCCGGTAAAGCTATATATGGTAAATAGCTATGTATAGTAAATGGTTAAATCGGGTAAAGCTATATATAGTAAATGGCTATATATAATAGATGGTTAAATCTCGTAAAGTTATATATATAGTAAACTGAGCTAAATATATATCCCATTCGGTAGAGCTTTGAAAATGTACTTTCTATTCTCTGTAATTCTCTCTTACTGTACATACGTGAAGTCATCAATAAAAAAAAAATCTTTTTAGCCAGAGTTCTCCTTGCACTTTTCTCTATCATGTTCTTTGTGTTCATCTAAATCGAGCGTGTACGTTGTTGTGCGATCCTAACAACTGGTATCAGAGCTAGGCGAAATTCACCACGATCTATGAAGATGGAAAGTTCAAAGATTGGAATTGAGAAGTTCGATGGATCCGATTTCGGTTTCTAGAAGATGCAAATTGAAGATTATCTGTATCAGAAAGATCTTCACGAACCTCTGTTGGGGGTGAAGCCGGATACCATGACCATGGAACAGTGGAAGCTCAAGGATCGACAAGCCTTAGGGATGATCCGGTTCACGCTATCCAGAAACGTGACGTTTAACATTATAAAGGAGAAGACAACGTCGGATCTGTTGAAGGCGCTGTCAAATATGTATGAAAAACCATTGGCTATGAACAAGGTGTATTTGATGCGGAGATTGTTCAATCAAAAGATGTCTGAAGGTGGATCTGTTGCTGATCATATAAATGAATTCAAAATGATCATAAGTCAACTAAGTTCGGTGGAAATTAATTTCGAAGATGAAATTAAAGCGTTGATTTTGATGTCATCCTTACCCGAGTCATGGGATACTATTGTTGCCGCAATCAGCAGTTCCCGAAGATTTGATAAACTGAAGTTTGGTGAAATTCGAGATGTGGTTCTCAGCGAAAGTATTCGCAAACGGGAAACTGGAGATTCATCAGGCAATGTTCTCAGTGTTGATCGAATGGGAAGAAGTAAACCGAAGGGCCCAAACAAAGGGCGATCAAAATCAAAGAACGGAGAAAAATCTCCAAATAGACCAAACGTAACGTGTTGGAATTGTGGAGAAAAAGGTCACTTTCGGACAGATTGTACAAGACCAAAGAGGAAGTAGAATCACAAATCTGGAGATGATGATGATTCTATAAATTCAACAGAAGACATTGGGGATGCTCTAATCCTCAGAGTGGACAGTTCGATTGAATCCTGGATTTTGAATTCAGGTGCATCTTTTCATTCGTCTCCAAATAAAGAGTTGTTCCGAAATTTCAAGTCTGAAAATTTCGAGAAGGTGTATCTTGCTGACAACAAAGATTTGGAGATTAAACGAAAATGAGATGTCTGCATAAAAACTCCAGCAGGAAATCAGTGGACATTAAAGGATGTGAGATATATTCTTGGTCTAAAAAAGAACCTGATCTCTATTGGTCAATTGGACAGCACAGGTTATGCAACAAAGTTAGGGAAGAGTTTGTGGAAGATTATGAAGGGTGCTACGGTGGTAGCACGTGGCTCAAAATCTGGAACCTTATACACCACTGCAGGGTGTATGAACATAGCTGTTGTTGCTGAGAGTGCTTCAAATTCAAGTCTACGGCACAATAGACTTGAACATATGAGCGCGAAAGGAATGAAGAGGCTGGCTGCGAAAGGAGTTTTAGAAGGTCTGAAATCTGTTGATGTGGGTCGTTGTGAGAACTACGTTATGAGCAAGCAGAAACGAGTTAGCTTCACAAGGACCGCCAGAGAATTGATGAAAGTGTCGTTGGAAATGGAACCATATGTGGAGCAAGGTTCGACGAAGCAAGTAGAAGTTGAGCTTGAGTTGCAGGAAAACTCACTTAGTGATATTGTAGCAGATACTCATGAAACTCCTGAGACTATTGCTGAGGAACCAGATGTGGAGTAAGGTTCGAAGACCACGAAGCAAGTGGGAGTTGAGCTTGAGTTGTAGGGAAACTCACCTAGTGATGTTGTAGCAGATACTCAAGAAACTCCTGAGACTACTGCTGAGGAACCAGATGTGAAGCAAGGTTCCAAGACAACAAAGCAAGTGGGAGTTGAGGTTGAATTGCGAAAAAAATCACCAAGTGATCTTGTAGCAAATACTCAACAAACTCCTGAGGTTGTTGCAGAGGAATCAGTAGTAGCGCAAGTGGTACCTGAACCGGTGTTGAGAAGATCATCCTGTACTATCAGAGTATCAGATATATATGTACCTTCATTACACTATCTGTTGCTGATGAAAGGGAACCACAACCCTTTGATGAGGTCCTACAGTTGGAGGATACAACCAAGTAGGAGCAAGCCATGGATGATGGGACGTCTAGGCTTCAAAAATGCGTCGTACTGAGATTGAGTACGTGGCAATAGTTGAAGCTGGAAAGAAGACGATATGGATGACAGACTATCTGGAAGAATGGGCAAGAAGTAGCATGAAGATATTCTTTACAGAGATAGTCAGAGTGTCATACAGTTGGCGAAGGAACCCGGTCTATCATTTAAAGAGAAAACAAAGAAGATGATACCATTTCACTTGCAGGTTAGTGAAAGATGGTGATGTGTTTGGAGAAGACAGAGGGTGCAAAGAATCCAGCAAACATGTTGACAAAATATGTTGATGTTGGAATATTGAGGTTGTGCAAATCTTCAATTGATATGGTGCCATGAAGACCATGAAAATGCTCATGGTCGTTTGAGAATGAAATTCTTGGTTGACTAGATCAGTCTCCAGGTGGGAGAATTGTTAGGTTATGGAGCCTGCTGCTTATTTATAGCTTGGTCAACGGTTATATCCGGTAAAGCTATATATGGTAAATAGCTATATATAGTAAATGGTTAAATCGAGTAAAGTTATATATAGTAAATAGCTATATATAGTAGATGGTTAAATCTAGTAAAACTATATATAGTAAACTGAACTATATATATATATATATCCGTTAGAGCTTTGAAAATGTACTTTCTATTCTCTGTAATTCTCTCTTACTTTACCTACATGAAGTCATCAATAAAAAATAAAAAAAAAAAATCTTTTTAGCCAGAGTTTTCTTTGCACTTTTCTCTATCCTGTTCTTTGTATTCATCTAGATCGAGCGTGTGCGTTGTTGTGCGATTCTAACACAAACTACCACTTGTAGAGTTTGAAAAATTGTCAGGGTTTAGGTTTCAATAACTTAGGCGGTCAGAAAGAATTAAAAGTCACATCCAAAGTTTATCAACACAGCTATCAGAGAAGACGAAGTTAAAGAGTTGAGATGTTTGAACAAGCAACAGAAAACTCGACTTGCAAGTCAAACCTAGGAATTAGTGCTAAGACTAGGAGATGTCAAACTCATCTTTTGCAGGTGCGTTCCCCAGATGTATCAATCGAGAGATATAAGGCTCAAATTTTAATAAAACGTTTAGTCTAGTGATGAAGAACACTACCGTACTTGTCTCACTACTATGTTTTCTTGCATAGAGAGTTGGACTTAGAGATCTACATGAACCAACCAAAGGGATTTGAGAACCAACTGTACTCAGAGATCAACCATTGGGTACGTGTTCAAGCTCGGTTTGGGATTAATTTCTTGGTGCAACAAAAGATAATTTTTAAATTTTTTTTTTTTTTTTGGGTTAATGACTTAAATTTTACAAAATTGTTTGTATTTAAAGTAGGTTGATTGGATTTGAATATCAAAGGTTGTTATCATTTTCACATTAACAGCACCACAGCACCACAGCACCACAGCACCATGTTCTCGGTGAGGCTTGAGAACTTTTTACGTCTTTCAGACGCAGTGTTTCAGTTGGGTCAAATTGCTGATGAAGCCAACCTGAAATTCTCTCCATTGCAATTCTCGTTAACCGCCTCGAACCATTCCCTTGGCTTCGTCGCATCGCTGCATATTTGGGACGACTTTTTCACAGAATATTCTGTTGATGAGAGTCTGAGTTCAAGAATTTCCCTCCAAAGTTTCCATAATGCTATGTGGGATGGCCAAAACTATTCTTCAATGACCATCCTCATGCAACTAGCCAGAAGCCGCATGGTGCTTGTGTTCCAAAATTCCGGTTAGTTTTTCAAGATTCGTTCTTTTATGCATTCTTGGAATCGGATCATTGGGAGGGGGAGCCCCACGTTCGCTAATTTAGGGAATGATCATGCGTTTATAAATAAGGAATAGTATCTCCATTGGTATAAGGTCTTTTGGGGAAGTCAGAGTGGACAATATTATACCATTTTGGAGAGTTGTGGTTCCTAACATGGTATCAGAGTCATGCAACTTATCATGTTAATAAGATCCTCAAATGTCGAACAAAGGGTGTTCTTTGTTCGAGGACTCCAGAGAAGGAGTCGAGCGTAGATTAAGGGGAGGCTCTAACATGGTATCAGAGTCATGTCAATAAGATCCTATAGTGTACTTTGTCAATAGTATCAGAGTCATGTCAATAAGGAGTCGTCGAGCCTAGATTAAGAGGAGGCTGTTCGAGGGCTTCATAGGTCTCAGGAGAGACTCTATAGTGTACTTTATTCGAGGGGAGGATTGTTGAGGATTGTCGGGATAATCATGGGTTTATAAATAAGGAATACATCTATATTGGTACGAGGTCTTTTGGGGAAGTTCAAAGCAAAGCCATTAGAGCTTATGCTTTGACAATATCATACTATTGTGGAGGGTCGTGATTCCTAACATGGTATTAGAGTCATGCCCTTAACTTAGCCATGTCAAGTCGAGAACTCCAGAGTAGGAGTCAAGATTGATTCTTTTATGAATTCTTGGAATGTTTGTTGTTCAGTAGAGGAGAATGCGCCGGGATGGGAACGTGAATTGACATTAATCCCTGTGGTCGAGGAGGAGTTAGGGCTACTTGAACCTGCAAAATATTTCCAAATTCGTTCAAAAGATTTCAGGCACATAATAAGAGAGGCATCTCCATTCCCTAATGATCCAAGTAATTAA

mRNA sequence

ATGTTCTTGGTCAGGCTTCACCACTTCGATCCTCTTATGGAAGCAACCTCCATACTGGCTCAAATTTCTAATGAAGCTGACCTGAAATTCTCGTCATCGAAGTTCTCCCTAATTACCTCGTACCCTTCCCGTCGCTTCGTCGCAACATTTCAAATCTCGCACCGTTTCTTCGCCAACTATTTCGTCGATCGGAATCACAGTTCAAGGGTTTCCCTCCAATCCTTCTATAATGCCATGTACGCTGGTATAGTTTTTTCTTCAATGACCATTCATTTTCCAGAAACAACAAGCCGCATGGTCCTTCAATTTGAGTCTTCAAATCATACGAGGATGCAAATGCATCGTGTGTTAAAACTATCACCTTCTCAAGAGGAGGAATTAGGCCAAATTCAACATGATCGATATTTCTCTATCATTTCACAAGATTTTAGAGACATCATAACAGGATTACCCTCGTTCCCAAATAATTCAAACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTTAACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCGGAATATTCAGTCGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAACTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGCTTCTCCCAATGCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACATTATAAGAGAAGCTCGAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGGTTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGCACCACAGCACCACAGCACCACAGCACCATGTTCTCGACGCAGTGTTTCAGTTGGGTCAAATTGCTGATGAAGCCAACCTGAAATTCTCTCCATTGCAATTCTCGTTAACCGCCTCGAACCATTCCCTTGGCTTCGTCGCATCGCTGCATATTTGGGACGACTTTTTCACAGAATATTCTGTTGATGAGAGTCTGAGTTCAAGAATTTCCCTCCAAAGTTTCCATAATGCTATGCACATAATAAGAGAGGCATCTCCATTCCCTAATGATCCAAGTAATTAA

Coding sequence (CDS)

ATGTTCTTGGTCAGGCTTCACCACTTCGATCCTCTTATGGAAGCAACCTCCATACTGGCTCAAATTTCTAATGAAGCTGACCTGAAATTCTCGTCATCGAAGTTCTCCCTAATTACCTCGTACCCTTCCCGTCGCTTCGTCGCAACATTTCAAATCTCGCACCGTTTCTTCGCCAACTATTTCGTCGATCGGAATCACAGTTCAAGGGTTTCCCTCCAATCCTTCTATAATGCCATGTACGCTGGTATAGTTTTTTCTTCAATGACCATTCATTTTCCAGAAACAACAAGCCGCATGGTCCTTCAATTTGAGTCTTCAAATCATACGAGGATGCAAATGCATCGTGTGTTAAAACTATCACCTTCTCAAGAGGAGGAATTAGGCCAAATTCAACATGATCGATATTTCTCTATCATTTCACAAGATTTTAGAGACATCATAACAGGATTACCCTCGTTCCCAAATAATTCAAACGCAGTCTTTCTGTTTAATCAATTGTCTCTTGAAGCCGACGTGAAATTCACTCATAACATGTTCTCGTTAACCGTCTCGAACGCTTCGATTCGGTTCATCATAAAGCTCGATATTTGGGACGAGCTTTTCGCGGAATATTCAGTCGATCCGAATCAGTGTTGGAGAATTTCCCTCTCAACTTTCCAAAAATCTTTGTGGGATGGCGGAAGTTACTCTTCCATGACCTTCCTTATGCATGAAACTAGAAGCCGCATGGTGCTTGAGTTTCATAATTCAGCTTCTCCCAATGCCCCAAGTTGGCATCGAGAATTGACATTGTTGCCTTCGGAAGAGGTGGATATTGGCGAAGTTGAAAGTGAAAAAAATTTCATAATTGAGGCAGAAGATTTCAGGCACATTATAAGAGAAGCTCGAAAAATTCAAATTGCAGGGTATGAAGAAGGAGATACAGATCAATTCCGAATCAGTCTACATCCGATGATGTTTTTCCTTAGATTGTCATATCAATCGGAAACAGCATGGTTTTGTAAGACGATGGATGGTTCCCATACTATAATCTCTATACCAGCCTCTCACTTTAATCTTGAATATGTGCACCACAGCACCACAGCACCACAGCACCATGTTCTCGACGCAGTGTTTCAGTTGGGTCAAATTGCTGATGAAGCCAACCTGAAATTCTCTCCATTGCAATTCTCGTTAACCGCCTCGAACCATTCCCTTGGCTTCGTCGCATCGCTGCATATTTGGGACGACTTTTTCACAGAATATTCTGTTGATGAGAGTCTGAGTTCAAGAATTTCCCTCCAAAGTTTCCATAATGCTATGCACATAATAAGAGAGGCATCTCCATTCCCTAATGATCCAAGTAATTAA

Protein sequence

MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANYFVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLSPSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREARKIQIAGYEEGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVHHSTTAPQHHVLDAVFQLGQIADEANLKFSPLQFSLTASNHSLGFVASLHIWDDFFTEYSVDESLSSRISLQSFHNAMHIIREASPFPNDPSN

Homology

[Close]

BLAST of Carg05587 vs. NCBI nr
Match: KAG7013721.1 (hypothetical protein SDJN02_23888, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 894.8 bits (2311), Expect = 3.0e-256
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0


Query: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60
           MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY
Sbjct: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60

Query: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120
           FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS
Sbjct: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120

Query: 121 PSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAVFLFNQLSLEADVKFTHNMFS 180
           PSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAVFLFNQLSLEADVKFTHNMFS
Sbjct: 121 PSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAVFLFNQLSLEADVKFTHNMFS 180

Query: 181 LTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETR 240
           LTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETR
Sbjct: 181 LTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISLSTFQKSLWDGGSYSSMTFLMHETR 240

Query: 241 SRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREARKIQI 300
           SRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREARKIQI
Sbjct: 241 SRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVESEKNFIIEAEDFRHIIREARKIQI 300

Query: 301 AGYEEGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVHHST 360
           AGYEEGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVHHST
Sbjct: 301 AGYEEGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYVHHST 360

Query: 361 TAPQHHVLDAVFQLGQIADEANLKFSPLQFSLTASNHSLGFVASLHIWDDFFTEYSVDES 420
           TAPQHHVLDAVFQLGQIADEANLKFSPLQFSLTASNHSLGFVASLHIWDDFFTEYSVDES
Sbjct: 361 TAPQHHVLDAVFQLGQIADEANLKFSPLQFSLTASNHSLGFVASLHIWDDFFTEYSVDES 420

Query: 421 LSSRISLQSFHNAMHIIREASPFPNDPSN 450
           LSSRISLQSFHNAMHIIREASPFPNDPSN
Sbjct: 421 LSSRISLQSFHNAMHIIREASPFPNDPSN 449

[Close]

BLAST of Carg05587 vs. NCBI nr
Match: KAG6575164.1 (hypothetical protein SDJN03_25803, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-104
Identity = 199/232 (85.78%), Postives = 200/232 (86.21%), Query Frame = 0


Query: 157 SNAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 216
           S+AVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL
Sbjct: 13  SDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 72

Query: 217 STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 276
           STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE
Sbjct: 73  STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 132

Query: 277 SEKNFIIEAEDFRHIIRE--------------------------------ARKIQIAGYE 336
           SEKNFIIEAEDFRHIIRE                                ARKIQIAGYE
Sbjct: 133 SEKNFIIEAEDFRHIIREVSSFPNDPIRITLTHLQVKFSVASKEIILTKQARKIQIAGYE 192

Query: 337 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV 357
           EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV
Sbjct: 193 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV 244

[Close]

BLAST of Carg05587 vs. NCBI nr
Match: XP_023006008.1 (uncharacterized protein LOC111498886 [Cucurbita maxima])

HSP 1 Score: 375.2 bits (962), Expect = 8.1e-100
Identity = 192/232 (82.76%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 157 SNAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 216
           S+AVFLFNQLSLE DVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL
Sbjct: 13  SDAVFLFNQLSLEGDVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 72

Query: 217 STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 276
            TFQK LWDG SYSSMTFLMHETRSRMVLEFHNSA PN PSWHRELTLLPSEEVDIGEVE
Sbjct: 73  PTFQKFLWDGESYSSMTFLMHETRSRMVLEFHNSAYPNVPSWHRELTLLPSEEVDIGEVE 132

Query: 277 SEKNFIIEAEDFRHIIRE--------------------------------ARKIQIAGYE 336
           SEKNFIIEAEDFRHIIRE                                ARKIQIAGYE
Sbjct: 133 SEKNFIIEAEDFRHIIREVSPFPNDTIRVTLTHLQVKFSVAAKEIILTKQARKIQIAGYE 192

Query: 337 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV 357
           EGDTDQFRISLHPM FFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV
Sbjct: 193 EGDTDQFRISLHPMTFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV 244

[Close]

BLAST of Carg05587 vs. NCBI nr
Match: XP_022958858.1 (uncharacterized protein LOC111460013 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 3.0e-94
Identity = 182/216 (84.26%), Postives = 184/216 (85.19%), Query Frame = 0


Query: 157 SNAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 216
           S+AVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL
Sbjct: 28  SDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 87

Query: 217 STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 276
           STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE
Sbjct: 88  STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 147

Query: 277 SEKNFIIEAEDFRHIIRE--------------------------------ARKIQIAGYE 336
           SEKNFIIEAEDFRHIIRE                                ARKIQIAGYE
Sbjct: 148 SEKNFIIEAEDFRHIIREVSSFPNDPIRVTLTHLQVKFSVASKEIILTKQARKIQIAGYE 207

Query: 337 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGS 341
           EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDG+
Sbjct: 208 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGA 243

[Close]

BLAST of Carg05587 vs. NCBI nr
Match: XP_022958857.1 (uncharacterized protein LOC111460011 [Cucurbita moschata])

HSP 1 Score: 302.8 bits (774), Expect = 5.1e-78
Identity = 157/162 (96.91%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60
           MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPS RFVATFQISHRFFANY
Sbjct: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSHRFVATFQISHRFFANY 60

Query: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120
           FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS
Sbjct: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120

Query: 121 PSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAVFL 163
           PSQEEELGQIQHDR+FSIISQDFRDIITGLPSFPNNS  V L
Sbjct: 121 PSQEEELGQIQHDRFFSIISQDFRDIITGLPSFPNNSIFVSL 162

[Close]

BLAST of Carg05587 vs. ExPASy TrEMBL
Match: A0A6J1L3R4 (uncharacterized protein LOC111498886 OS=Cucurbita maxima OX=3661 GN=LOC111498886 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 3.9e-100
Identity = 192/232 (82.76%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 157 SNAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 216
           S+AVFLFNQLSLE DVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL
Sbjct: 13  SDAVFLFNQLSLEGDVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 72

Query: 217 STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 276
            TFQK LWDG SYSSMTFLMHETRSRMVLEFHNSA PN PSWHRELTLLPSEEVDIGEVE
Sbjct: 73  PTFQKFLWDGESYSSMTFLMHETRSRMVLEFHNSAYPNVPSWHRELTLLPSEEVDIGEVE 132

Query: 277 SEKNFIIEAEDFRHIIRE--------------------------------ARKIQIAGYE 336
           SEKNFIIEAEDFRHIIRE                                ARKIQIAGYE
Sbjct: 133 SEKNFIIEAEDFRHIIREVSPFPNDTIRVTLTHLQVKFSVAAKEIILTKQARKIQIAGYE 192

Query: 337 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV 357
           EGDTDQFRISLHPM FFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV
Sbjct: 193 EGDTDQFRISLHPMTFFLRLSYQSETAWFCKTMDGSHTIISIPASHFNLEYV 244

[Close]

BLAST of Carg05587 vs. ExPASy TrEMBL
Match: A0A6J1H490 (uncharacterized protein LOC111460013 OS=Cucurbita moschata OX=3662 GN=LOC111460013 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 182/216 (84.26%), Postives = 184/216 (85.19%), Query Frame = 0


Query: 157 SNAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 216
           S+AVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL
Sbjct: 28  SDAVFLFNQLSLEADVKFTHNMFSLTVSNASIRFIIKLDIWDELFAEYSVDPNQCWRISL 87

Query: 217 STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 276
           STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE
Sbjct: 88  STFQKSLWDGGSYSSMTFLMHETRSRMVLEFHNSASPNAPSWHRELTLLPSEEVDIGEVE 147

Query: 277 SEKNFIIEAEDFRHIIRE--------------------------------ARKIQIAGYE 336
           SEKNFIIEAEDFRHIIRE                                ARKIQIAGYE
Sbjct: 148 SEKNFIIEAEDFRHIIREVSSFPNDPIRVTLTHLQVKFSVASKEIILTKQARKIQIAGYE 207

Query: 337 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGS 341
           EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDG+
Sbjct: 208 EGDTDQFRISLHPMMFFLRLSYQSETAWFCKTMDGA 243

[Close]

BLAST of Carg05587 vs. ExPASy TrEMBL
Match: A0A6J1H2Z8 (uncharacterized protein LOC111460011 OS=Cucurbita moschata OX=3662 GN=LOC111460011 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.5e-78
Identity = 157/162 (96.91%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60
           MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPS RFVATFQISHRFFANY
Sbjct: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSHRFVATFQISHRFFANY 60

Query: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120
           FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS
Sbjct: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120

Query: 121 PSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAVFL 163
           PSQEEELGQIQHDR+FSIISQDFRDIITGLPSFPNNS  V L
Sbjct: 121 PSQEEELGQIQHDRFFSIISQDFRDIITGLPSFPNNSIFVSL 162

[Close]

BLAST of Carg05587 vs. ExPASy TrEMBL
Match: A0A6J1KZ05 (uncharacterized protein LOC111498887 OS=Cucurbita maxima OX=3661 GN=LOC111498887 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.8e-74
Identity = 149/162 (91.98%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60
           MFLVRLHHFDPL EATS+LAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY
Sbjct: 1   MFLVRLHHFDPLREATSLLAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60

Query: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120
            VDRNHSSRVSLQSFY+AMY GI FSSMTIHFPETTSRMVLQFESSNHT+++MHRVLKLS
Sbjct: 61  SVDRNHSSRVSLQSFYDAMYDGIFFSSMTIHFPETTSRMVLQFESSNHTKLKMHRVLKLS 120

Query: 121 PSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAVFL 163
           PSQEEELGQIQHDR+FSIISQDFRDIITGLPSFPNNS  V L
Sbjct: 121 PSQEEELGQIQHDRFFSIISQDFRDIITGLPSFPNNSIFVSL 162

[Close]

BLAST of Carg05587 vs. ExPASy TrEMBL
Match: A0A1S3C8J1 (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-31
Identity = 78/160 (48.75%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 1   MFLVRLHHFDPLMEATSILAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60
           MFLVRL  F+PL++ATS+LAQ++ +AD+KF+     +I S  S +FVAT Q+S R F N+
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60

Query: 61  FVDRNHSSRVSLQSFYNAMYAGIVFSSMTIHFPETTSRMVLQFESSNHTRMQMHRVLKLS 120
            VD N SS+VSLQ F++AM  G  FSSMTIH  +TT++MVL+FE+ +H    +H  L LS
Sbjct: 61  SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALS 120

Query: 121 PSQEEELGQIQHDRYFSIISQDFRDIITGLPSFPNNSNAV 161
           P Q E LGQ+++  +F++ S++ R II  LP F  ++ +V
Sbjct: 121 PPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSV 160

The following BLAST results are available for this feature:

BLAST of Carg05587 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013721.1	3.0e-256	100.00	hypothetical protein SDJN02_23888, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6575164.1	2.4e-104	85.78	hypothetical protein SDJN03_25803, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023006008.1	8.1e-100	82.76	uncharacterized protein LOC111498886 [Cucurbita maxima]	[more]
XP_022958858.1	3.0e-94	84.26	uncharacterized protein LOC111460013 [Cucurbita moschata]	[more]
XP_022958857.1	5.1e-78	96.91	uncharacterized protein LOC111460011 [Cucurbita moschata]	[more]

BLAST of Carg05587 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05587 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L3R4	3.9e-100	82.76	uncharacterized protein LOC111498886 OS=Cucurbita maxima OX=3661 GN=LOC111498886...	[more]
A0A6J1H490	1.4e-94	84.26	uncharacterized protein LOC111460013 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A6J1H2Z8	2.5e-78	96.91	uncharacterized protein LOC111460011 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A6J1KZ05	4.8e-74	91.98	uncharacterized protein LOC111498887 OS=Cucurbita maxima OX=3661 GN=LOC111498887...	[more]
A0A1S3C8J1	2.9e-31	48.75	uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=...	[more]

BLAST of Carg05587 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.70.10.10		coord: 158..363 e-value: 1.3E-12 score: 49.6
None	No IPR available	GENE3D	3.70.10.10		coord: 364..443 e-value: 1.6E-8 score: 36.1
None	No IPR available	GENE3D	3.70.10.10		coord: 1..157 e-value: 4.1E-16 score: 60.9
None	No IPR available	PANTHER	PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 363..436 coord: 163..299
None	No IPR available	PANTHER	PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..153
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 1..108
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 370..438
IPR000730	Proliferating cell nuclear antigen, PCNA	PANTHER	PTHR11352:SF0	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..153
IPR000730	Proliferating cell nuclear antigen, PCNA	PANTHER	PTHR11352:SF0	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 363..436 coord: 163..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05587-RA	Carg05587-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006275	regulation of DNA replication
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030337	DNA polymerase processivity factor activity