Carg05548 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGACACAACGCCCCAAAACAACACTGTATCGATCATCTGTCACGATGCCAATAACCCATCGTTATGCTAGCAATTGTTGAAACCAGTGAGAAACTTAGATGTCGTTGGCGTAACTAATTACACCTTCAACCTTACACATACGAGCACCATCGAATGTCTCCACTACGCACGGCGACTTGAGGGGGAAGAGACAATCAATCCAGAGTTTAAGAATCGATATTCAGATTGTTCGAAACACATAAACTCTTCGTTGCCCGACGTAGAAACTGCTCAATATTGCATGGGTTATCATACATAA ATGCAGACACAACGCCCCAAAACAACACTGTATCGATCATCTGTCACGATGCCAATAACCCATCTGAGAAACTTAGATGTCGTTGGCGTAACTAATTACACCTTCAACCTTACACATACGAGCACCATCGAATGTCTCCACTACGCACGGCGACTTGAGGGGGAAGAGACAATCAATCCAGAGTTTAAGAATCGATATTCAGATTGTTCGAAACACATAAACTCTTCGTTGCCCGACGTAGAAACTGCTCAATATTGCATGGGTTATCATACATAA ATGCAGACACAACGCCCCAAAACAACACTGTATCGATCATCTGTCACGATGCCAATAACCCATCTGAGAAACTTAGATGTCGTTGGCGTAACTAATTACACCTTCAACCTTACACATACGAGCACCATCGAATGTCTCCACTACGCACGGCGACTTGAGGGGGAAGAGACAATCAATCCAGAGTTTAAGAATCGATATTCAGATTGTTCGAAACACATAAACTCTTCGTTGCCCGACGTAGAAACTGCTCAATATTGCATGGGTTATCATACATAA MQTQRPKTTLYRSSVTMPITHLRNLDVVGVTNYTFNLTHTSTIECLHYARRLEGEETINPEFKNRYSDCSKHINSSLPDVETAQYCMGYHT Homology
BLAST of Carg05548 vs. NCBI nr
Match: KAG7013683.1 (hypothetical protein SDJN02_23850, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191.4 bits (485), Expect = 3.3e-45 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Carg05548 vs. NCBI nr
Match: XP_022958860.1 (pectinesterase inhibitor-like [Cucurbita moschata]) HSP 1 Score: 89.0 bits (219), Expect = 2.3e-14 Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Carg05548 vs. NCBI nr
Match: XP_023548317.1 (pectinesterase inhibitor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05 Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of Carg05548 vs. NCBI nr
Match: XP_022958859.1 (pectinesterase inhibitor 1-like [Cucurbita moschata]) HSP 1 Score: 53.9 bits (128), Expect = 8.3e-04 Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Carg05548 vs. ExPASy TrEMBL
Match: A0A6J1H4N5 (pectinesterase inhibitor-like OS=Cucurbita moschata OX=3662 GN=LOC111460015 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Carg05548 vs. ExPASy TrEMBL
Match: A0A6J1H6C1 (pectinesterase inhibitor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460014 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.0e-04 Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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