Carg05532 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR Homology
BLAST of Carg05532 vs. NCBI nr
Match: KAG6575094.1 (hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013667.1 hypothetical protein SDJN02_23834, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg05532 vs. NCBI nr
Match: KAG7026338.1 (hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19 Identity = 59/100 (59.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of Carg05532 vs. NCBI nr
Match: KGN47400.1 (hypothetical protein Csa_023055 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 8.4e-19 Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Carg05532 vs. NCBI nr
Match: TYK02938.1 (hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 5.1e-16 Identity = 57/92 (61.96%), Postives = 63/92 (68.48%), Query Frame = 0
BLAST of Carg05532 vs. NCBI nr
Match: XP_022138799.1 (uncharacterized protein LOC111009876 [Momordica charantia]) HSP 1 Score: 88.6 bits (218), Expect = 2.8e-14 Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A0A0KCE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.1e-19 Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A5D3BVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00180 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16 Identity = 57/92 (61.96%), Postives = 63/92 (68.48%), Query Frame = 0
BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A6J1CB45 (uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009876 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14 Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of Carg05532 vs. ExPASy TrEMBL
Match: M0RPK9 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103970456 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A4S8J1R9 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t04910 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Carg05532 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08 Identity = 22/43 (51.16%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of Carg05532 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08 Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of Carg05532 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06 Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0
BLAST of Carg05532 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 44.3 bits (103), Expect = 5.6e-05 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Carg05532 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 44.3 bits (103), Expect = 5.6e-05 Identity = 19/41 (46.34%), Postives = 29/41 (70.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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