Carg05532 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg05532
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF3511)
LocationCarg_Chr17: 2035271 .. 2035522 (+)
RNA-Seq ExpressionCarg05532
SyntenyCarg05532
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA

mRNA sequence

ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA

Coding sequence (CDS)

ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA

Protein sequence

MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR
Homology
BLAST of Carg05532 vs. NCBI nr
Match: KAG6575094.1 (hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013667.1 hypothetical protein SDJN02_23834, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVES 60
          MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVES
Sbjct: 1  MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVES 60

Query: 61 KFKASLRNGIRWVKIKCSELLNR 84
          KFKASLRNGIRWVKIKCSELLNR
Sbjct: 61 KFKASLRNGIRWVKIKCSELLNR 83

BLAST of Carg05532 vs. NCBI nr
Match: KAG7026338.1 (hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19
Identity = 59/100 (59.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query: 1   MAANGNRGRGRELKKPCRSDTYVSSEN-HQLPAASTAACH----------------DEPE 60
           MAA G+  RG +LK PCRSDTY+ +EN  Q PAA TAA +                DE E
Sbjct: 1   MAARGHTERGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSKGGSDESE 60

Query: 61  AKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 84
            KRQ+R+AKYKAYAVESKFKAS+R+GIRWVKIKC +LL R
Sbjct: 61  VKRQKRIAKYKAYAVESKFKASIRSGIRWVKIKCGDLLRR 100

BLAST of Carg05532 vs. NCBI nr
Match: KGN47400.1 (hypothetical protein Csa_023055 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 8.4e-19
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYV------SSENHQLPAASTAA-CHDEPEAKRQRRVAKY 60
          MAA GNR RG  LK PCRSDTY       ++ +H    +S+ +  HDEPE KRQRR+AKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKFKASLRNGIRWVKIKCSELLNR 84
          KAYAVESK K+SLR+GIRWVKIKC+ELL R
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

BLAST of Carg05532 vs. NCBI nr
Match: TYK02938.1 (hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 5.1e-16
Identity = 57/92 (61.96%), Postives = 63/92 (68.48%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSSENH--QLPAASTA-------ACHDEPEAKRQRRVA 60
          MA  GNR  G  LK  CRSD Y SS ++  +  AA TA         HDE E KRQRR+A
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNTSSVSNGHDEQEVKRQRRIA 60

Query: 61 KYKAYAVESKFKASLRNGIRWVKIKCSELLNR 84
          KYKAYAVESK K+SLRNGIRWVKIK SELL+R
Sbjct: 61 KYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

BLAST of Carg05532 vs. NCBI nr
Match: XP_022138799.1 (uncharacterized protein LOC111009876 [Momordica charantia])

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-14
Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0

Query: 1   MAANGNRGRGRELKKP--CRSDTY------VSSENHQLPAA------------STAACHD 60
           MA  GNR RG E K    C SD Y       S  N + PAA            S +  +D
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGGSSFSGGYD 60

Query: 61  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 84
           EPEAKRQRR+AKYKAYAVESK K+S RNGIRWVKIKC+++ +R
Sbjct: 61  EPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A0A0KCE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.1e-19
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYV------SSENHQLPAASTAA-CHDEPEAKRQRRVAKY 60
          MAA GNR RG  LK PCRSDTY       ++ +H    +S+ +  HDEPE KRQRR+AKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKFKASLRNGIRWVKIKCSELLNR 84
          KAYAVESK K+SLR+GIRWVKIKC+ELL R
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A5D3BVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00180 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16
Identity = 57/92 (61.96%), Postives = 63/92 (68.48%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSSENH--QLPAASTA-------ACHDEPEAKRQRRVA 60
          MA  GNR  G  LK  CRSD Y SS ++  +  AA TA         HDE E KRQRR+A
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNTSSVSNGHDEQEVKRQRRIA 60

Query: 61 KYKAYAVESKFKASLRNGIRWVKIKCSELLNR 84
          KYKAYAVESK K+SLRNGIRWVKIK SELL+R
Sbjct: 61 KYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A6J1CB45 (uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009876 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14
Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0

Query: 1   MAANGNRGRGRELKKP--CRSDTY------VSSENHQLPAA------------STAACHD 60
           MA  GNR RG E K    C SD Y       S  N + PAA            S +  +D
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGGSSFSGGYD 60

Query: 61  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 84
           EPEAKRQRR+AKYKAYAVESK K+S RNGIRWVKIKC+++ +R
Sbjct: 61  EPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

BLAST of Carg05532 vs. ExPASy TrEMBL
Match: M0RPK9 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103970456 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 32  AASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 83
           A S+A C  +PEAKR+RRVA YKAYAVE K KAS R G RW+K+KCSEL++
Sbjct: 94  AGSSAWCFTDPEAKRRRRVASYKAYAVEGKVKASFRKGFRWIKVKCSELVH 144

BLAST of Carg05532 vs. ExPASy TrEMBL
Match: A0A4S8J1R9 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t04910 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 32  AASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 83
           A S+A C  +PEAKR+RRVA YKAYAVE K KAS R G RW+K+KCSEL++
Sbjct: 95  AGSSAWCFSDPEAKRRRRVAGYKAYAVEGKVKASFRKGFRWIKVKCSELVH 145

BLAST of Carg05532 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08
Identity = 22/43 (51.16%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 41  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 84
           + E KR++R+A+YKAY VE K K++L+NG RW+K KC ++++R
Sbjct: 67  DAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHR 109

BLAST of Carg05532 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08
Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 40  DEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 83
           ++PE KR+RRVAKYK Y+ E K K +LR   +W+KI+CS++++
Sbjct: 80  NDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIH 122

BLAST of Carg05532 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0

Query: 41  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 83
           +P+ +R++RV  Y+AY VE K K S R   +W+K KC++LLN
Sbjct: 75  DPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

BLAST of Carg05532 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 44.3 bits (103), Expect = 5.6e-05
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0

Query: 32 AASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVK 75
          AAS +    +PE++R+RRVA YK Y+VE K K S+R   +W K
Sbjct: 54 AASRSWSFSDPESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFK 96

BLAST of Carg05532 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 44.3 bits (103), Expect = 5.6e-05
Identity = 19/41 (46.34%), Postives = 29/41 (70.73%), Query Frame = 0

Query: 41  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELL 82
           +PE +R++RVA YK Y VE K K S RN  RW+K + ++++
Sbjct: 61  DPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVV 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6575094.11.1e-37100.00hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026338.12.2e-1959.00hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN47400.18.4e-1963.33hypothetical protein Csa_023055 [Cucumis sativus][more]
TYK02938.15.1e-1661.96hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa][more]
XP_022138799.12.8e-1452.43uncharacterized protein LOC111009876 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KCE94.1e-1963.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1[more]
A0A5D3BVC02.5e-1661.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CB451.3e-1452.43uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
M0RPK91.3e-0966.67Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103970... [more]
A0A4S8J1R91.7e-0966.67Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t04910 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT2G47480.14.2e-0851.16Protein of unknown function (DUF3511) [more]
AT3G05725.17.1e-0851.16Protein of unknown function (DUF3511) [more]
AT2G19460.11.3e-0647.62Protein of unknown function (DUF3511) [more]
AT3G13910.15.6e-0548.84Protein of unknown function (DUF3511) [more]
AT5G11970.15.6e-0546.34Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 40..82
e-value: 2.2E-21
score: 75.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 15..81
NoneNo IPR availablePANTHERPTHR33193:SF13DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 15..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05532-RACarg05532-RAmRNA