Carg05359 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05359
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	auxin-responsive protein SAUR50-like
Location	Carg_Chr07: 4429470 .. 4429874 (-)
RNA-Seq Expression	Carg05359
Synteny	Carg05359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCGATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGACGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG

mRNA sequence

ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCGATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGACGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG

Coding sequence (CDS)

ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCGATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGACGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG

Protein sequence

MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

Homology

[Close]

BLAST of Carg05359 vs. NCBI nr
Match: KAG7027194.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.5 bits (685), Expect = 3.2e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 134

[Close]

BLAST of Carg05359 vs. NCBI nr
Match: XP_023517185.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLL DRLESSKDHDSHSPSPTSTPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLSDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 134

[Close]

BLAST of Carg05359 vs. NCBI nr
Match: XP_022962864.1 (auxin-induced protein 6B-like [Cucurbita moschata])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH--SPSPTSTPTGS 60
           MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH  SPSPTSTPTGS
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPSPTSTPTGS 60

Query: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120
           FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
Sbjct: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120

Query: 121 CCNGRFDFGEIVEEFL 135
           CCNGRFDFGEIVEEFL
Sbjct: 121 CCNGRFDFGEIVEEFL 136

[Close]

BLAST of Carg05359 vs. NCBI nr
Match: KAG6595178.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262.7 bits (670), Expect = 1.7e-66
Identity = 134/138 (97.10%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH----SPSPTSTPT 60
           MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH    SPSPTSTPT
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPSPSPTSTPT 60

Query: 61  GSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSA 120
           GSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSA
Sbjct: 61  GSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSA 120

Query: 121 VECCNGRFDFGEIVEEFL 135
           VECCNGRFDFGEIVEEFL
Sbjct: 121 VECCNGRFDFGEIVEEFL 138

[Close]

BLAST of Carg05359 vs. NCBI nr
Match: XP_022972619.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 4.3e-65
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGE SSHNE LLRDRLESSKDHDSHSPSPTSTPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGE-SSHNEYLLRDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 133

[Close]

BLAST of Carg05359 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-12
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 51  PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAF 110
           P   P G F VYVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    F
Sbjct: 40  PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVF 99

Query: 111 QEIVSAV 118
           Q + S +
Sbjct: 100 QTLTSMI 106

[Close]

BLAST of Carg05359 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.3e-11
Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 52  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQ 111
           +S P G   VYVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 112 EIVSAV 118
            I+ ++
Sbjct: 108 RIMESL 113

[Close]

BLAST of Carg05359 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 30/84 (35.71%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 38  LESSKDHDSHSPSPTSTPTGSFAVYV---GDERQRFVVPTSFLSHPLFRMLLDKAYREFG 97
           L+S + H   S      P G  A+ V   G+E+QRF+VP  + +HPLF  LL +A  E+G
Sbjct: 8   LKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYG 67

Query: 98  FEQRNALVVPCSVSAFQEIVSAVE 119
           F+Q+  + +PC V  F+ + + ++
Sbjct: 68  FDQKGTITIPCHVEEFRYVQALID 91

[Close]

BLAST of Carg05359 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 25/66 (37.88%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 52  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQ 111
           +S P+G   V VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 112 EIVSAV 118
           ++V ++
Sbjct: 106 QVVESL 111

[Close]

BLAST of Carg05359 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 44  HDSHSPSP----------TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF 103
           H  H+P P           + P G   VYVG+E +RFVV    ++HP+F  LL+++ +E+
Sbjct: 34  HRLHAPPPPWSICPARRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEY 93

Query: 104 GFEQRNALVVPCSVSAFQEIVSAV 118
           G+ Q+  L +PC V  F+ +V  +
Sbjct: 94  GYAQKGVLHIPCHVIVFERVVETL 117

[Close]

BLAST of Carg05359 vs. ExPASy TrEMBL
Match: A0A6J1HIA1 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111463231 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.9e-67
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH--SPSPTSTPTGS 60
           MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSH  SPSPTSTPTGS
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPSPTSTPTGS 60

Query: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120
           FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
Sbjct: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120

Query: 121 CCNGRFDFGEIVEEFL 135
           CCNGRFDFGEIVEEFL
Sbjct: 121 CCNGRFDFGEIVEEFL 136

[Close]

BLAST of Carg05359 vs. ExPASy TrEMBL
Match: A0A6J1IC38 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111471159 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.1e-65
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGE SSHNE LLRDRLESSKDHDSHSPSPTSTPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGE-SSHNEYLLRDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 133

[Close]

BLAST of Carg05359 vs. ExPASy TrEMBL
Match: A0A6J1EDQ2 (auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111433233 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.0e-59
Identity = 121/134 (90.30%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGE +S+NECLLRD+LE  +DHDS SPS  STPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGE-ASYNECLLRDQLEPPEDHDSQSPS--STPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           +YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL+VPCSVSAFQEIVSAVECC
Sbjct: 61  IYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGE+VEEFL
Sbjct: 121 NGRFDFGELVEEFL 131

[Close]

BLAST of Carg05359 vs. ExPASy TrEMBL
Match: A0A6J1ILC7 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111478079 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57
Identity = 119/134 (88.81%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGE +S+NECLLRD+LE  +DHDS SPS  +TPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGE-ASYNECLLRDQLEPPEDHDSQSPS--TTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           +YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL+VPCSVSAFQEIVSAVEC 
Sbjct: 61  IYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECS 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGE+VEEFL
Sbjct: 121 NGRFDFGELVEEFL 131

[Close]

BLAST of Carg05359 vs. ExPASy TrEMBL
Match: A0A1S3CHA6 (auxin-induced protein X15 OS=Cucumis melo OX=3656 GN=LOC103500907 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.6e-57
Identity = 120/136 (88.24%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVK-VRVGTEGESSSHNECLLRDRLESSKDHDSHSP-SPTSTPTGS 60
           ML KKMVSFKKLAKKVK VRVGT+ E  SHNECLL DRLE ++DHDS+SP SPTSTPTG 
Sbjct: 1   MLAKKMVSFKKLAKKVKAVRVGTDSE-HSHNECLLTDRLELTEDHDSNSPSSPTSTPTGY 60

Query: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120
           FA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRNALVVPCSVSAF+EIVSAVE
Sbjct: 61  FAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFEQRNALVVPCSVSAFEEIVSAVE 120

Query: 121 CCNGRFDFGEIVEEFL 135
           CCNGRFDFGEIVEEFL
Sbjct: 121 CCNGRFDFGEIVEEFL 135

[Close]

BLAST of Carg05359 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.1 bits (362), Expect = 8.4e-35
Identity = 82/141 (58.16%), Postives = 103/141 (73.05%), Query Frame = 0


Query: 1   MLGKKMVSFKKLAKKVK-----VRVGTEGES-SSHNECLLRDRLESSKDHDSHSPSPTST 60
           MLGK++ SFK LAKK+K      R G EG S S++NE LL +      + D  +   + T
Sbjct: 1   MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMN------EADEAAMMASKT 60

Query: 61  PTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF-GFEQRNALVVPCSVSAFQEI 120
           PTG+FAVYVG+ER + VVPTS+L+HPLFRMLLDK++ EF  FEQ+  LVVPCS+S FQ++
Sbjct: 61  PTGTFAVYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDV 120

Query: 121 VSAVECCNGRFDFGEIVEEFL 135
           V+AVE CNG FDFGE VEEFL
Sbjct: 121 VNAVESCNGNFDFGEFVEEFL 135

[Close]

BLAST of Carg05359 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.3 bits (207), Expect = 7.9e-17
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 26  SSSHNECLLRDRLESSKDHDSHSPSPT-STPTGSFAVYVGDERQRFVVPTSFLSHPLFRM 85
           S + N+ LL  +   S +    SP P    P G+ AVYVG E +RF++PTS+LSH LF++
Sbjct: 50  SPAINKRLLDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKV 109

Query: 86  LLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 119
           LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Sbjct: 110 LLEKAEEEFGFDQSGALTIPCEVETFKYLLKCME 143

[Close]

BLAST of Carg05359 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.3 bits (207), Expect = 7.9e-17
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 26  SSSHNECLLRDRLESSKDHDSHSPSPT-STPTGSFAVYVGDERQRFVVPTSFLSHPLFRM 85
           S + N+ LL  +   S +    SP P    P G+ AVYVG E +RF++PTS+LSH LF++
Sbjct: 50  SPAINKRLLDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKV 109

Query: 86  LLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 119
           LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Sbjct: 110 LLEKAEEEFGFDQSGALTIPCEVETFKYLLKCME 143

[Close]

BLAST of Carg05359 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-15
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 39  ESSKDHDSHSPS-PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQ 98
           +S ++    SP  P   P G  AVYVG E +RF++PT+FLSH LF++LL+KA  E+GF+ 
Sbjct: 63  DSDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDH 122

Query: 99  RNALVVPCSVSAFQEIVSAVE 119
             AL +PC V  F+ ++  +E
Sbjct: 123 SGALTIPCEVETFKYLLKCIE 143

[Close]

BLAST of Carg05359 vs. TAIR 10
Match: AT3G20210.2 (delta vacuolar processing enzyme )

HSP 1 Score: 74.7 bits (182), Expect = 6.3e-14
Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 7   VSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPS--PTSTPTGSFAVYVG 66
           V  K+    ++     E   +   E  ++DRL S +  D   P+      P G  AVYVG
Sbjct: 451 VDVKQTVSAIEQASNQENRRNRRYETNIKDRLVSGELSDGSRPARDQNGVPRGHLAVYVG 510

Query: 67  -DERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECCN 122
            +ERQRFV+PT +L +P FR L+D+   EFG++    + +PC  S F+EI+     C+
Sbjct: 511 REERQRFVIPTKYLQYPEFRSLMDEVADEFGYDHEGGIHIPCEESVFEEILIRYMSCD 568

The following BLAST results are available for this feature:

BLAST of Carg05359 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027194.1	3.2e-68	100.00	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023517185.1	1.6e-67	99.25	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962864.1	1.0e-66	98.53	auxin-induced protein 6B-like [Cucurbita moschata]	[more]
KAG6595178.1	1.7e-66	97.10	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022972619.1	4.3e-65	98.51	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]

BLAST of Carg05359 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	3.3e-12	46.27	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9LTV3	6.3e-11	43.94	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]
Q9ZUZ3	1.2e-09	35.71	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
O64538	1.6e-09	37.88	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
Q9SA49	1.6e-09	34.52	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]

BLAST of Carg05359 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIA1	4.9e-67	98.53	auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111463231 PE=3...	[more]
A0A6J1IC38	2.1e-65	98.51	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111471159...	[more]
A0A6J1EDQ2	5.0e-59	90.30	auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111433233 PE=3 SV=...	[more]
A0A6J1ILC7	1.6e-57	88.81	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111478079 PE=3 ...	[more]
A0A1S3CHA6	4.6e-57	88.24	auxin-induced protein X15 OS=Cucumis melo OX=3656 GN=LOC103500907 PE=3 SV=1	[more]

BLAST of Carg05359 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36210.1	8.4e-35	58.16	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	7.9e-17	44.68	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	7.9e-17	44.68	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.9e-15	44.44	SAUR-like auxin-responsive protein family	[more]
AT3G20210.2	6.3e-14	34.75	delta vacuolar processing enzyme	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 28..116 e-value: 7.0E-26 score: 90.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..58
None	No IPR available	PANTHER	PTHR31374:SF28	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 1..134
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 1..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05359-RA	Carg05359-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin