Carg05242 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05242
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Aldedh domain-containing protein
Location	Carg_Chr07: 3715348 .. 3716465 (-)
RNA-Seq Expression	Carg05242
Synteny	Carg05242

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTTACTTGAAGTCATTAAGCAATCCTCCGCCTTATCCAAACCGCCTGTTTCCCAATCTGACTACCCCATTCTCCTCAATCCAGACGATATTCTAATCAGTTTGGAATCCAAAGTTGATGAACCAGATCGTCTTAGTCTTGTCAATCCCATTGTTGGATGGCAAATATCGGAAACCGATTTTAAGGTGATAGAGCTGGGGAAAAAGTTCCATGAAAATCCCAGGCAGAAGCTCAAAAACAGAAACTTCTCAAAGCCTGAGTTTATAAACATTTTGAATGCGTTTCTTGAAAAAATGAGGGAAAGGATTGAATTGCAGTTGGTGTTAGTTCATCCGACAATTGTTACACTAAGGTTCTGATTGAGAAACTCGGGTTCCTGATGAGTGAAGACGTTGGAGAGGTGGTTTTAGATACATGTATTGCGTTCGAGGACTGGGAATTGGTAGAGACTTTTGTTGTGAATAGGCTTGTTAAACACTCATCTTATTCAAATTTGATTGTGAAGCTGGTGGGGAAGAAGAGGTCGGATTTACTTTGTCTTTGTATCCAACAAGCATTTGATTTTGGTCCTGCTGATTTACATTGCCTTTTGAAGTACTTTCTTTGCCCTTCCAAGAAGGCTGATGCGAGTATAGCGAACGTGAGAAAGGGATGGGAGGGCCAAGCATTGGTAGCCATTGAGAAGGCAAAGGAGACTGCAATTCTGCTCATGATAGCACATGATGGATTCTCAGCTCAAGAACTGTGTTTGCATTATCTGTTGGCATCACCTAATGTTGATGAATCCATTCTTTCTTCTGCTCTCAATAAGCTCAATCATGAAGAGATGATTAGTTTGATTCGGTATCTGGGAAAATGGTTAAAGAAATATGAGAGATTTCCTCACGCAGTTACTGTGTTGGGTTTGAAGGCTTGTGATTGGGTTCCCAAACTTGATGATGTGGTCAGATATGTTGGACTAATGCTGGACCAGAACTTCTCTTCGTTGGTATTGCTTCCAGATTTTCAGGAGGAGCTGAAATCCATGGAGGGTCTGGTTAGTTCTTTAGCCTTGGAATCAAAACTCTGCTGTTATGTTGCTAATATAGCAGAAAATTTAAGAACCGAAGATTAA

mRNA sequence

ATGACTTTACTTGAAGTCATTAAGCAATCCTCCGCCTTATCCAAACCGCCTGTTTCCCAATCTGACTACCCCATTCTCCTCAATCCAGACGATATTCTAATCAGTTTGGAATCCAAAGTTGATGAACCAGATCGTCTTAGTCTTGTCAATCCCATTGTTGGATGGCAAATATCGGAAACCGATTTTAAGGTGATAGAGCTGGGGAAAAAGTTCCATGAAAATCCCAGGCAGAAGCTCAAAAACAGAAACTTCTCAAAGCCTGAGTTTATAAACATTTTGAATGCGTTTCTTGAAAAAATGAGGGAAAGGATTGAATTGCAGTTGGTTTCATCCGACAATTGTTACACTAAGGTTCTGATTGAGAAACTCGGGTTCCTGATGAGTGAAGACGTTGGAGAGGTGGTTTTAGATACATGTATTGCGTTCGAGGACTGGGAATTGGTAGAGACTTTTGTTGTGAATAGGCTTGTTAAACACTCATCTTATTCAAATTTGATTGTGAAGCTGGTGGGGAAGAAGAGGTCGGATTTACTTTGTCTTTGTATCCAACAAGCATTTGATTTTGGTCCTGCTGATTTACATTGCCTTTTGAAGTACTTTCTTTGCCCTTCCAAGAAGGCTGATGCGAGTATAGCGAACGTGAGAAAGGGATGGGAGGGCCAAGCATTGGTAGCCATTGAGAAGGCAAAGGAGACTGCAATTCTGCTCATGATAGCACATGATGGATTCTCAGCTCAAGAACTGTGTTTGCATTATCTGTTGGCATCACCTAATGTTGATGAATCCATTCTTTCTTCTGCTCTCAATAAGCTCAATCATGAAGAGATGATTAGTTTGATTCGGTATCTGGGAAAATGGTTAAAGAAATATGAGAGATTTCCTCACGCAGTTACTGTGTTGGGTTTGAAGGCTTGTGATTGGGTTCCCAAACTTGATGATGTGGTCAGATATGTTGGACTAATGCTGGACCAGAACTTCTCTTCGTTGGTATTGCTTCCAGATTTTCAGGAGGAGCTGAAATCCATGGAGGGTCTGGTTAGTTCTTTAGCCTTGGAATCAAAACTCTGCTGTTATGTTGCTAATATAGCAGAAAATTTAAGAACCGAAGATTAA

Coding sequence (CDS)

ATGACTTTACTTGAAGTCATTAAGCAATCCTCCGCCTTATCCAAACCGCCTGTTTCCCAATCTGACTACCCCATTCTCCTCAATCCAGACGATATTCTAATCAGTTTGGAATCCAAAGTTGATGAACCAGATCGTCTTAGTCTTGTCAATCCCATTGTTGGATGGCAAATATCGGAAACCGATTTTAAGGTGATAGAGCTGGGGAAAAAGTTCCATGAAAATCCCAGGCAGAAGCTCAAAAACAGAAACTTCTCAAAGCCTGAGTTTATAAACATTTTGAATGCGTTTCTTGAAAAAATGAGGGAAAGGATTGAATTGCAGTTGGTTTCATCCGACAATTGTTACACTAAGGTTCTGATTGAGAAACTCGGGTTCCTGATGAGTGAAGACGTTGGAGAGGTGGTTTTAGATACATGTATTGCGTTCGAGGACTGGGAATTGGTAGAGACTTTTGTTGTGAATAGGCTTGTTAAACACTCATCTTATTCAAATTTGATTGTGAAGCTGGTGGGGAAGAAGAGGTCGGATTTACTTTGTCTTTGTATCCAACAAGCATTTGATTTTGGTCCTGCTGATTTACATTGCCTTTTGAAGTACTTTCTTTGCCCTTCCAAGAAGGCTGATGCGAGTATAGCGAACGTGAGAAAGGGATGGGAGGGCCAAGCATTGGTAGCCATTGAGAAGGCAAAGGAGACTGCAATTCTGCTCATGATAGCACATGATGGATTCTCAGCTCAAGAACTGTGTTTGCATTATCTGTTGGCATCACCTAATGTTGATGAATCCATTCTTTCTTCTGCTCTCAATAAGCTCAATCATGAAGAGATGATTAGTTTGATTCGGTATCTGGGAAAATGGTTAAAGAAATATGAGAGATTTCCTCACGCAGTTACTGTGTTGGGTTTGAAGGCTTGTGATTGGGTTCCCAAACTTGATGATGTGGTCAGATATGTTGGACTAATGCTGGACCAGAACTTCTCTTCGTTGGTATTGCTTCCAGATTTTCAGGAGGAGCTGAAATCCATGGAGGGTCTGGTTAGTTCTTTAGCCTTGGAATCAAAACTCTGCTGTTATGTTGCTAATATAGCAGAAAATTTAAGAACCGAAGATTAA

Protein sequence

MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISETDFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRERIELQLVSSDNCYTKVLIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLLCLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEKAKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGKWLKKYERFPHAVTVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEELKSMEGLVSSLALESKLCCYVANIAENLRTED

Homology

[Close]

BLAST of Carg05242 vs. NCBI nr
Match: XP_023518282.1 (uncharacterized protein LOC111781808 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 629.8 bits (1623), Expect = 1.5e-176
Identity = 324/353 (91.78%), Postives = 332/353 (94.05%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIKQSSALSKP VSQSDYPILLNPDDILISL+SKVDEPDRLSLVNPIVGWQISET
Sbjct: 1   MTLLEVIKQSSALSKPLVSQSDYPILLNPDDILISLKSKVDEPDRLSLVNPIVGWQISET 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D  VIELGKKFHEN RQKLKNRNFSKPEFINILNAFLEKMR R  I + + SSDNCYTK+
Sbjct: 61  DSMVIELGKKFHENLRQKLKNRNFSKPEFINILNAFLEKMRGRVGIAVGVSSSDNCYTKI 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMS+DVGE+VLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL
Sbjct: 121 LIEKLGFLMSKDVGEMVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEKAKETAILLMI 240
           CLCIQQA DFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQAL AIEKAKE AILLMI
Sbjct: 181 CLCIQQATDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALAAIEKAKEAAILLMI 240

Query: 241 AHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGKWLKKYERFPHAV- 300
           AHDGFSAQELCLHYLLASPNVDE ILSSAL+KLNHEEMISLIRYLGKWLKKYERFPHAV 
Sbjct: 241 AHDGFSAQELCLHYLLASPNVDEFILSSALSKLNHEEMISLIRYLGKWLKKYERFPHAVS 300

Query: 301 -----TVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEELKSMEGL 346
                T+LGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDF EELKSMEGL
Sbjct: 301 CPNASTLLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFHEELKSMEGL 353

[Close]

BLAST of Carg05242 vs. NCBI nr
Match: KAG7034372.1 (hypothetical protein SDJN02_04099, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 588.2 bits (1515), Expect = 5.0e-164
Identity = 304/390 (77.95%), Postives = 337/390 (86.41%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIKQ+SA S+P  S+SDYPILLNPDDIL SL+SKVDEPD +SLVNPI+GW+ISET
Sbjct: 1   MTLLEVIKQASASSEPLASRSDYPILLNPDDILTSLKSKVDEPDPVSLVNPIIGWKISET 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN + KLKNRNFSKPEFI ILN FLEK+RE   I + + SSDN YTK+
Sbjct: 61  DSKVIDLGKKFHENLKLKLKNRNFSKPEFIKILNVFLEKVRETVGIVVGVSSSDNRYTKI 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMSED+G +VLDTCIA E+WELVETFVVNRLVKH+SYSNLI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLMSEDIGNLVLDTCIALEEWELVETFVVNRLVKHASYSNLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLCPSK+A AS++NVRK WE QAL+AIEK          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCPSKEAYASMSNVRKEWEDQALLAIEKASDKSLKDKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+A+DGFS QELCLHYLLASPN+DE ILSSALNKLNHEEMI LIRYLGK
Sbjct: 241 SNLAKEAAIQLMVAYDGFSTQELCLHYLLASPNLDEVILSSALNKLNHEEMIRLIRYLGK 300

Query: 301 WLKKYERFPHAV------TVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLK+YERFP AV      TVLGLKACDWVPKLDDVVRY+GL+LD+NFSSLVL PDF EEL
Sbjct: 301 WLKRYERFPQAVSCPKAATVLGLKACDWVPKLDDVVRYLGLVLDENFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           KSME LVSSLALESKLCC VAN+A+NLRTE
Sbjct: 361 KSMEELVSSLALESKLCCVVANVADNLRTE 390

[Close]

BLAST of Carg05242 vs. NCBI nr
Match: XP_023544303.1 (uncharacterized protein LOC111803920 [Cucurbita pepo subsp. pepo] >XP_023544304.1 uncharacterized protein LOC111803920 [Cucurbita pepo subsp. pepo] >XP_023544305.1 uncharacterized protein LOC111803920 [Cucurbita pepo subsp. pepo] >XP_023544306.1 uncharacterized protein LOC111803920 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 587.4 bits (1513), Expect = 8.5e-164
Identity = 304/390 (77.95%), Postives = 336/390 (86.15%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIKQSSA S+P  S+SDYPILLNPDDIL SL+SKVDEPD +SLVNPI+GW+ISET
Sbjct: 1   MTLLEVIKQSSASSEPLASRSDYPILLNPDDILTSLKSKVDEPDPVSLVNPIIGWKISET 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN + KLKNRNFSKPEFI ILN FLEK+RE   I + + SSDN YTK+
Sbjct: 61  DSKVIDLGKKFHENLKLKLKNRNFSKPEFIKILNVFLEKVRETVGIVVGVSSSDNRYTKI 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGF+MSED+G +VLDTCIA E+WELVETFVVNRLVKH+SYSNLI+KLV KKRSDLL
Sbjct: 121 LIEKLGFVMSEDIGNLVLDTCIALEEWELVETFVVNRLVKHASYSNLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLCPSK+A AS+ NVRK WE QAL+AIEK          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCPSKEAYASMPNVRKEWEDQALLAIEKASDKSLKDKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+A+DGFS QELCLHYLLASPN+DE ILSSALNKLNHEEMI LIRYLGK
Sbjct: 241 SNLAKEAAIQLMVAYDGFSTQELCLHYLLASPNLDEVILSSALNKLNHEEMIRLIRYLGK 300

Query: 301 WLKKYERFPHAV------TVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLK+YERFP AV      TVLGLKACDWVPKLDDVVRY+GL+LD+NFSSLVL PDF EEL
Sbjct: 301 WLKRYERFPQAVHCPKAATVLGLKACDWVPKLDDVVRYLGLVLDENFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           KSME LVSSLALESKLCC VAN+A+NLRTE
Sbjct: 361 KSMEELVSSLALESKLCCVVANVADNLRTE 390

[Close]

BLAST of Carg05242 vs. NCBI nr
Match: KAG6604211.1 (hypothetical protein SDJN03_04820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 585.5 bits (1508), Expect = 3.2e-163
Identity = 303/390 (77.69%), Postives = 336/390 (86.15%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIKQ+SA S+P  S+SDYPILLNPDDIL SL+SKVDEPD +SLVNPI+GW+IS T
Sbjct: 1   MTLLEVIKQASASSEPLASRSDYPILLNPDDILTSLKSKVDEPDPVSLVNPIIGWKISVT 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN + KLKNRNFSKPEFI ILN FLEK+RE   I + + SSDN YTK+
Sbjct: 61  DSKVIDLGKKFHENLKLKLKNRNFSKPEFIKILNVFLEKVRETVGIVVGVSSSDNRYTKI 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMSED+G +VLDTCIA E+WELVETFVVNRLVKH+SYSNLI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLMSEDIGNLVLDTCIALEEWELVETFVVNRLVKHASYSNLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLCPSK+A AS++NVRK WE QAL+AIEK          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCPSKEAYASMSNVRKEWEDQALLAIEKASDKSLKDKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+A+DGFS QELCLHYLLASPN+DE ILSSALNKLNHEEMI LIRYLGK
Sbjct: 241 SNLAKEAAIQLMVAYDGFSTQELCLHYLLASPNLDEVILSSALNKLNHEEMIRLIRYLGK 300

Query: 301 WLKKYERFPHAV------TVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLK+YERFP AV      TVLGLKACDWVPKLDDVVRY+GL+LD+NFSSLVL PDF EEL
Sbjct: 301 WLKRYERFPQAVSCPKAATVLGLKACDWVPKLDDVVRYLGLVLDENFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           KSME LVSSLALESKLCC VAN+A+NLRTE
Sbjct: 361 KSMEELVSSLALESKLCCVVANVADNLRTE 390

[Close]

BLAST of Carg05242 vs. NCBI nr
Match: XP_038882008.1 (uncharacterized protein LOC120073314 [Benincasa hispida] >XP_038882010.1 uncharacterized protein LOC120073314 [Benincasa hispida] >XP_038882011.1 uncharacterized protein LOC120073314 [Benincasa hispida])

HSP 1 Score: 583.9 bits (1504), Expect = 9.4e-163
Identity = 299/390 (76.67%), Postives = 338/390 (86.67%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIKQ+SA S P  SQSDYPILLNPDD+L SL+SKVDEPD +SLVNPI+GWQISET
Sbjct: 1   MTLLEVIKQASACSDPLDSQSDYPILLNPDDVLASLKSKVDEPDPISLVNPIIGWQISET 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN +QKL+NRNFS+PEFINILN FLEKMRER  I + + S DNCYTKV
Sbjct: 61  DSKVIDLGKKFHENFKQKLRNRNFSRPEFINILNVFLEKMRERVGIAISVSSLDNCYTKV 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMS+ VG++VL+TCIAFEDWELVETFVVN+LVKH+SYSNLI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLMSKVVGDLVLETCIAFEDWELVETFVVNKLVKHASYSNLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLCPSK+A AS++NVRK WE QAL+AI+K          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCPSKEAYASMSNVRKEWEDQALLAIQKASDKSLKGKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+AHDGFS +ELCLHYLLASPN+DE ILSSAL+KLN EEMI+LIRYLGK
Sbjct: 241 SNLAKEAAIQLMVAHDGFSTKELCLHYLLASPNLDEVILSSALSKLNREEMINLIRYLGK 300

Query: 301 WLKKYERFPHAVT------VLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLKKYER+P AV+      VLGLKACDWVPKLDD+VRY+GL+LD NFSSLVL PDF EEL
Sbjct: 301 WLKKYERYPQAVSCPKASIVLGLKACDWVPKLDDIVRYLGLVLDVNFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           K+M  LVSSLALESK CC+VA++AENLRTE
Sbjct: 361 KTMGELVSSLALESKQCCFVASVAENLRTE 390

[Close]

BLAST of Carg05242 vs. ExPASy TrEMBL
Match: A0A6J1ISG4 (uncharacterized protein LOC111478009 OS=Cucurbita maxima OX=3661 GN=LOC111478009 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 6.0e-163
Identity = 302/390 (77.44%), Postives = 336/390 (86.15%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIKQ+SA S+P  S+SDYPILLNPDDIL SL+SKVDEPD +SLVNPI+GW+ISET
Sbjct: 1   MTLLEVIKQASASSEPLASRSDYPILLNPDDILTSLKSKVDEPDPVSLVNPIIGWKISET 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN + KLKNRNFSKPEFI IL  FLEK+RE   I + + SSDN YTK+
Sbjct: 61  DSKVIDLGKKFHENLKLKLKNRNFSKPEFIKILCVFLEKVRETVGIVVGVSSSDNRYTKI 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMS+D+G++VLDTCIA E+WEL+ETFVVNRLVKH+SYSNLI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLMSKDIGDLVLDTCIALEEWELLETFVVNRLVKHASYSNLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLCPSK+A AS+ NVRK WE QAL+AIEK          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCPSKEAYASMPNVRKEWEDQALLAIEKASDKSLKDKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+A+DGFS QELCLHYLLASPN+DE ILSSALNKLNHEEMI LIRYLGK
Sbjct: 241 SNLAKEAAIQLMVAYDGFSTQELCLHYLLASPNLDEVILSSALNKLNHEEMIRLIRYLGK 300

Query: 301 WLKKYERFPHAV------TVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLK+YERFP AV      TVLGLKACDWVPKLDDVVRY+GLMLD+NFSSLVL PDF EEL
Sbjct: 301 WLKRYERFPQAVHCPKAATVLGLKACDWVPKLDDVVRYLGLMLDENFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           KSME LVSSLALESKLCC VAN+A+NLRTE
Sbjct: 361 KSMEELVSSLALESKLCCVVANVADNLRTE 390

[Close]

BLAST of Carg05242 vs. ExPASy TrEMBL
Match: A0A6J1BYW7 (uncharacterized protein LOC111005949 OS=Momordica charantia OX=3673 GN=LOC111005949 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.3e-162
Identity = 302/390 (77.44%), Postives = 333/390 (85.38%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIK++SA+S+P  SQSDYPILLNPDDIL  L+SK DEPD +SLVNP+ GW+ISET
Sbjct: 1   MTLLEVIKKASAISEPLASQSDYPILLNPDDILPCLKSKGDEPDPISLVNPVTGWKISET 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D  VI+LGKKFHEN +QKLKNRNFSKPEFINI NAFLEKMRER  I + + SSD  YTKV
Sbjct: 61  DSNVIDLGKKFHENLKQKLKNRNFSKPEFINIFNAFLEKMRERVGITVGVSSSDKSYTKV 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFL+S+DV ++VLDTCIAFEDWELVETFVVNRLVKHSSYSNLI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLISKDVEDLVLDTCIAFEDWELVETFVVNRLVKHSSYSNLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+Q  DFGPADLHC LKYFLCPSK A AS+ NVRK WEGQAL+AIEK          
Sbjct: 181 CLCIKQVSDFGPADLHCTLKYFLCPSKDAYASMGNVRKEWEGQALLAIEKASDKSLKGKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AILLMIAHDGFSAQELCLHYLLASPN+DE ILSSAL+KLNH+EMISLIRYLGK
Sbjct: 241 SNLAKEAAILLMIAHDGFSAQELCLHYLLASPNLDEVILSSALSKLNHDEMISLIRYLGK 300

Query: 301 WLKKYERFPHAV------TVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLKKYE+FP AV      TVLGLKACDWVPK DDV+R +GL+LD+NFSSLVL  DF EEL
Sbjct: 301 WLKKYEKFPQAVPCPKASTVLGLKACDWVPKFDDVIRCLGLVLDENFSSLVLHSDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           KSME LVSS ALES+LCC+VAN+A NLRTE
Sbjct: 361 KSMEELVSSFALESRLCCFVANVAGNLRTE 390

[Close]

BLAST of Carg05242 vs. ExPASy TrEMBL
Match: A0A6J1GGU8 (uncharacterized protein LOC111453815 OS=Cucurbita moschata OX=3662 GN=LOC111453815 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.9e-162
Identity = 301/390 (77.18%), Postives = 334/390 (85.64%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLEVIKQ+S  S+P  S+SDYPILLNPDDIL SL+SKVDEPD +SLVNPI+GW+ISET
Sbjct: 1   MTLLEVIKQASVSSEPLASRSDYPILLNPDDILTSLKSKVDEPDPVSLVNPIIGWKISET 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN + KLKNRNFSKPEFI ILN FLEK+RE   I + + SSDN YTK+
Sbjct: 61  DSKVIDLGKKFHENLKLKLKNRNFSKPEFIKILNVFLEKVRETVGIVVGVSSSDNRYTKI 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMSED+G +VLDTCIA E+WELVETFVVNRLVKH+SYSNLI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLMSEDIGNLVLDTCIALEEWELVETFVVNRLVKHASYSNLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLC SK+A AS+ NVRK WE QAL+AIEK          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCLSKEAYASMPNVRKEWEDQALLAIEKASDKSLKDKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+A+DGFS +ELCLHYLLASPN+DE ILSSALNKLNHEEMI LIRYLGK
Sbjct: 241 SNLAKEAAIQLMVAYDGFSTEELCLHYLLASPNLDEVILSSALNKLNHEEMICLIRYLGK 300

Query: 301 WLKKYERFPHAV------TVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLK+YERFP AV      TVLGLKACDWVPKLDDVVRY+GL+LD+NFSSLVL PDF EEL
Sbjct: 301 WLKRYERFPQAVSCPKAATVLGLKACDWVPKLDDVVRYLGLVLDENFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           KSME LVSSLALESKLCC VAN+A+NLRTE
Sbjct: 361 KSMEELVSSLALESKLCCVVANVADNLRTE 390

[Close]

BLAST of Carg05242 vs. ExPASy TrEMBL
Match: A0A1S3B166 (uncharacterized protein LOC103484732 OS=Cucumis melo OX=3656 GN=LOC103484732 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 4.7e-160
Identity = 292/390 (74.87%), Postives = 333/390 (85.38%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLE+IKQ+SA S     QSDYPILLNPD+I  +L+SKVDEPD +SLVNP++GWQ+SE 
Sbjct: 1   MTLLEIIKQASACSDSLDFQSDYPILLNPDEIFTNLKSKVDEPDPISLVNPVIGWQVSEN 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN +QKLKNR+FSKPEF+N+LNAFLEKM+ER  I + +  SDNCYTKV
Sbjct: 61  DCKVIDLGKKFHENLKQKLKNRSFSKPEFLNLLNAFLEKMKERVGIVVSVSPSDNCYTKV 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMS+DVG++V DTCIAFEDWELVETFVVN+LVKH+SYS LI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLMSKDVGDLVFDTCIAFEDWELVETFVVNKLVKHASYSTLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLCPSK+A AS++NVRK WE QAL+AIEK          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCPSKEAYASMSNVRKEWEDQALLAIEKASDKNLKGKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+AHDGFS QELCLHYLLASPN+DE IL+SAL+KLN EEMI LI+YLGK
Sbjct: 241 SNLAKEAAIQLMLAHDGFSTQELCLHYLLASPNLDEVILASALSKLNREEMIHLIQYLGK 300

Query: 301 WLKKYERFPHAVT------VLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLKKYERFP AV+      VLGLKACDWVPKLDDVVRY+GL+LD+NFSSLVL PDF EEL
Sbjct: 301 WLKKYERFPQAVSCPKASIVLGLKACDWVPKLDDVVRYLGLLLDENFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           K M  LVSSLA+ESKLCC++AN AENLRTE
Sbjct: 361 KIMGELVSSLAMESKLCCFLANAAENLRTE 390

[Close]

BLAST of Carg05242 vs. ExPASy TrEMBL
Match: A0A5D3CR98 (Putative F6A14.6 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005210 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 4.7e-160
Identity = 292/390 (74.87%), Postives = 333/390 (85.38%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLE+IKQ+SA S     QSDYPILLNPD+I  +L+SKVDEPD +SLVNP++GWQ+SE 
Sbjct: 1   MTLLEIIKQASACSDSLDFQSDYPILLNPDEIFTNLKSKVDEPDPISLVNPVIGWQVSEN 60

Query: 61  DFKVIELGKKFHENPRQKLKNRNFSKPEFINILNAFLEKMRER--IELQLVSSDNCYTKV 120
           D KVI+LGKKFHEN +QKLKNR+FSKPEF+N+LNAFLEKM+ER  I + +  SDNCYTKV
Sbjct: 61  DCKVIDLGKKFHENLKQKLKNRSFSKPEFLNLLNAFLEKMKERVGIVVSVSPSDNCYTKV 120

Query: 121 LIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGKKRSDLL 180
           LIEKLGFLMS+DVG++V DTCIAFEDWELVETFVVN+LVKH+SYS LI+KLV KKRSDLL
Sbjct: 121 LIEKLGFLMSKDVGDLVFDTCIAFEDWELVETFVVNKLVKHASYSTLILKLVAKKRSDLL 180

Query: 181 CLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---------- 240
           CLCI+QA DFGPADLHC+LKYFLCPSK+A AS++NVRK WE QAL+AIEK          
Sbjct: 181 CLCIKQASDFGPADLHCILKYFLCPSKEAYASMSNVRKEWEDQALLAIEKASDKNLKGKK 240

Query: 241 ---AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLIRYLGK 300
              AKE AI LM+AHDGFS QELCLHYLLASPN+DE IL+SAL+KLN EEMI LI+YLGK
Sbjct: 241 SNLAKEAAIQLMLAHDGFSTQELCLHYLLASPNLDEVILASALSKLNREEMIHLIQYLGK 300

Query: 301 WLKKYERFPHAVT------VLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPDFQEEL 360
           WLKKYERFP AV+      VLGLKACDWVPKLDDVVRY+GL+LD+NFSSLVL PDF EEL
Sbjct: 301 WLKKYERFPQAVSCPKASIVLGLKACDWVPKLDDVVRYLGLLLDENFSSLVLHPDFHEEL 360

Query: 361 KSMEGLVSSLALESKLCCYVANIAENLRTE 370
           K M  LVSSLA+ESKLCC++AN AENLRTE
Sbjct: 361 KIMGELVSSLAMESKLCCFLANAAENLRTE 390

[Close]

BLAST of Carg05242 vs. TAIR 10
Match: AT1G18850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 40 Blast hits to 40 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 370.2 bits (949), Expect = 2.0e-102
Identity = 202/393 (51.40%), Postives = 268/393 (68.19%), Query Frame = 0


Query: 1   MTLLEVIKQSSALSKPPVSQSDYPILLNPDDILISLESKVDEPDRLSLVNPIVGWQISET 60
           MTLLE I  + A      SQSDYPI L+ D I  +L+ K++ P+  +LVNPI GW ISE+
Sbjct: 1   MTLLEAISNAVANQDKVDSQSDYPIPLSHDGIFANLKPKLENPNLGTLVNPISGWGISES 60

Query: 61  DFKVIELGKKFHENPRQKLKNRN-FSKPEFINILNAFLEKMRERI-----ELQLVSSDNC 120
           D +VI+LGKKF    ++KLK+ N F K EF+ +L  FLEK+ E++     E ++V  D  
Sbjct: 61  DVEVIDLGKKFSSKLKRKLKDTNGFVKDEFVKMLKQFLEKIGEKVGISEAESEMVLGDQA 120

Query: 121 YT--KVLIEKLGFLMSEDVGEVVLDTCIAFEDWELVETFVVNRLVKHSSYSNLIVKLVGK 180
            +  ++L+EK GFLM  DV  +VL  CI+ E WELVE  + N LV HSSYS L+  LV K
Sbjct: 121 GSEIQILVEKNGFLMGRDVSGLVLKGCISLEMWELVEILISNSLVDHSSYSYLVSNLVEK 180

Query: 181 KRSDLLCLCIQQAFDFGPADLHCLLKYFLCPSKKADASIANVRKGWEGQALVAIEK---- 240
           +RSDLLC+ I++A D G  +L  +LKYFLCPSK+A +++A VR+ WE QA++AIEK    
Sbjct: 181 QRSDLLCVVIKEASDLGATELLSILKYFLCPSKEAISTMAKVREEWESQAMLAIEKVSNT 240

Query: 241 --------AKETAILLMIAHDGFSAQELCLHYLLASPNVDESILSSALNKLNHEEMISLI 300
                   A+E +ILLM+AHDGFS  ELCLHYLLAS NVDE + +SA++KLN  EM S I
Sbjct: 241 ELSKKSKVAEEASILLMVAHDGFSTSELCLHYLLASRNVDEVMFASAVSKLNGNEMGSFI 300

Query: 301 RYLGKWLKKYERFPH------AVTVLGLKACDWVPKLDDVVRYVGLMLDQNFSSLVLLPD 360
           RYL KW+KKYE FP       A + LGLK C+WVP+L D+ + +GL++D+NFS+LVL  D
Sbjct: 301 RYLSKWMKKYEMFPQAGPCPKAASKLGLKLCNWVPELTDITKCLGLLIDENFSTLVLYSD 360

Query: 361 FQEELKSMEGLVSSLALESKLCCYVANIAENLR 368
             EELKS+  +   LA ESKL C+VAN+ E+L+
Sbjct: 361 LHEELKSIARVADGLASESKLSCFVANVVESLK 393

The following BLAST results are available for this feature:

BLAST of Carg05242 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518282.1	1.5e-176	91.78	uncharacterized protein LOC111781808 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7034372.1	5.0e-164	77.95	hypothetical protein SDJN02_04099, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023544303.1	8.5e-164	77.95	uncharacterized protein LOC111803920 [Cucurbita pepo subsp. pepo] >XP_023544304....	[more]
KAG6604211.1	3.2e-163	77.69	hypothetical protein SDJN03_04820, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038882008.1	9.4e-163	76.67	uncharacterized protein LOC120073314 [Benincasa hispida] >XP_038882010.1 unchara...	[more]

BLAST of Carg05242 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg05242 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ISG4	6.0e-163	77.44	uncharacterized protein LOC111478009 OS=Cucurbita maxima OX=3661 GN=LOC111478009...	[more]
A0A6J1BYW7	1.3e-162	77.44	uncharacterized protein LOC111005949 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GGU8	3.9e-162	77.18	uncharacterized protein LOC111453815 OS=Cucurbita moschata OX=3662 GN=LOC1114538...	[more]
A0A1S3B166	4.7e-160	74.87	uncharacterized protein LOC103484732 OS=Cucumis melo OX=3656 GN=LOC103484732 PE=...	[more]
A0A5D3CR98	4.7e-160	74.87	Putative F6A14.6 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Carg05242 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18850.1	2.0e-102	51.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37181	F6A14.6 PROTEIN	coord: 1..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05242-RA	Carg05242-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing