Carg05238 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05238
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	B3 domain-containing transcription factor VRN1-like isoform X1
Location	Carg_Chr07: 3698910 .. 3703605 (+)
RNA-Seq Expression	Carg05238
Synteny	Carg05238

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCGAAGAAGTTCGTGAAAGATCATGGCGAACTTTTATCCACTTCCGTACGTCTCAAGCTCCCGGACGGCATGGAATGGAAGGTCGGTTTGACGACGGCTCCCAACGGCGTTGTTTGGCTGCAAAATGGGTGGCACAAATTTGCAGAGCATTATAGCTTAGAGTTTGGTTCTTTGTTGGTATTTAAATCAGATGGGTTTTCAACTTTTCAAACATCCATATTCGACCCAAGTGGAGTGGAAACAGAATATTGTTGCATTCTTAACGATTCTAGAGCAGAATTTACAATGGAATATGAAGATTCTGATGAAAATACAGAGAGTTCCCCCCAGCGTTTAAGTAAGAGGAAGAACAAGCCTTCAGTTCCATCTCCTCCTCAATCTCGTAAGAAACTGAAAGCTGAAGAAGGTATGAACATTTTGAGTATATAGAGCTTACAGCTTCAAATAAGTGTTGTTAATGCCTAATCTATGCAGAAGGGTGCCTAATCATGAAGAACATGCCAAAAACTGAAGCAGGGGTATCAAGTAGAAGGCAACAATTTGTAAACAAACCTGAAGCAGCTCAAAGATTCACCTCAAAATCAGAGAAGCCTAGCTTTAAAATTGTGATGAAACAACCAAACGTGCGGGGAAAATTCGCCATGGTAAGCACTTTCTTCTGCAAACCCACATAAAAAAAACACCTCCTTTCTTCAATTCAGCTGAAAAAATTGAAGCTTTTTGGTTCTTGTAGATTATCCCCAAAGATTTTGCAGAGGAACACTTACCTGATGACTTCGGAATCATCAAACTCCAAACCCCAAACGGTAGAAAGTGGCCACTTTTGTATAAACGCAGACGAAATCAAGAGAACTTTGTGTACTTTTCAAGTGGGTGGAAGCGTTTTGTAGAGGAAAATGTGTTGAAAGAAGGGGATATTGGGTTGTTTCAATTGATTAAGAAAGACATATTTTCATTCACCAAATTACAAGACACCTCTCCTTTTCCTTCCCTTGCAACAAAGACCAGAAACCCCTGTTTTGAGGCGAACATTCTGAACAGACGCCACAAGAAATTTGTTCTGGTAACAAACAAAAAAACAAAACCCCATGTTTTATTTTTAGTCCAAAACATAGTTGAAACCATTTTATGTTGTTGATTGGCAGAACATTCCTATGGTGTTTGCAAAGGAGCATTTTTCATCAGACATGCGCTCTGCAAAGCTTCAAGTTGGGAATAGACAATGGATAGTGGCATTGAGACAATATGGTAGCTCTGTCAGATTATCAGCTGGGTGGTGCTTATTTTATGGAGACAATGGCTTGGAAGATGGAGATTCATGCTTGTTTGAGATGGTGGACACAAAAAACTGTGTTTTTAAAGTCACCATTTTCAAACATGTCTCCAGCTCTGCTTCAATGGACTAGATAGAATGTAATGTTAATGGTCTGTCTTTTTTTGTTTAGAAGGTAGGCTTTGACTCAAAATTCGAACTTTTTAGGCCTTAGTCACTAACATCAACAATCCCGACTTTTTTTTGAAGATGGTGCTTATCTTTCGAACTTTTAGATATGGATTACTATACAAAAATTTCATAGTTTAGAGATTAAATTTGTAATTTTCTTTTATACAAACACCAGTCCTAAGTTTAATTTTAGTTCTAACTCGAATTCAAAAGTTAATTTGTTTTATAAATTCTCTATCTAATCATATAAAATAATTGTGACAGTTTTTTTTTTTTTGGTTAATAATTAATTATAATTTTTTTTTTTTAACAATAGCGGGAAGATTTCATAATTCAAAAAGTATATATGTAATTTGAAAAATATATAATATATATAAAATTATATATATGTCCCGAAACCCTATAAAAATTCGCCACACCTTCATCAAGCCGGAACTTGCATGCATGTGGTGTCACGTATCCATCTAACACTCGAAGTACCAAATTTTTTTTTTACTCTTTATTCAGTTCTTCTTCATCTAATGATTTCAAGCCTTCTTTTGCAGATCAGTGTCAGAATCGCTCCTCTATTCTTCGTATTTTTTTTTTTTTCGGATTCGACATTGATTTCAAGCTTTCTTTTGAGTTCTGTGGAACTTGAGTGCGAGAAATTTTCGGTGCCTTTTTTTTTTTCTTCATTATTTGGTTGATTCGTGGGATTTGGACAAATTACCCTGTTTCTTATTATAAATTGGGGAAAAGAACACTTGGGATTGCTCTATTTTGAGTCATTGACCTTTTTTGAATTCTGCATTGAACATGCATGCAATATAGTATGAAACTTCACTTACTATTTAATTCTTCTCTCTGTTCTTTATGCTTGAGTCAACCATTTAGTTCTAGTCATACTGGGTCAACATGTCGATTTTTTTTTTTTCCTAATCACATATTGAAATTGTAGAGAATTTTAGACTTTATATAACTCATTGATTATATTTTTGTGGGAAGGGTTTTGATCTTTGTGGACCAGAAGAAGAAGAAAAAAAAAGTCATATGCTGATATAAATGTTTGATTATCCTAAAGTATGACGGCGTTAATTAGTTTTAAAAACAAGCTAATATTAAATAAATGTCATGAACGATATGTTGTGTGTGTGTGTGTGTGTGAAGTGATTTGTTTTGCTTTGTTTTGTCATCTGTTTGCATAAGTTTCATTCCTCATCTCTTATATTCAGAGCATACCACCGGCTTTTCAGAAGCATTTACATAGAACCTTTCCAATAAAAGCTACCATCAGAGATCATACAGGAAAATCATGGTGCGTTACATTGGAAAAAGTGGATGGACTTGTGTATTTCAAGAATGGCTGGCAGGCTTTTGTGGATTACCATTGTTTGAAGTATGGAGACTTTTTAGTATTTGGATATGATGGGGGTTTTACGTTTGATGTCAAAATATTTGGTAAAAATGGATGCAAGAAGGCAGTGGTTGCAGAAGCCGATAATTCTGTTCCAATTTTAGATTCAGTGTTAGCAATAGCGGGTAAGTCTCTTCCCATTTTGAAGGTCAAAGTAGAGGCTGTGGATGAGAAAGAAGAGGTCAAGCCTTTAATTTCTGGCAAGAGGAAACGATTACAAGTTGGATCAGGTGAGTACTTCTCGGTTTGCCCCACTCAACTCAGATCCTGGTTTGTAGTGTTTTGGTTTCTTCTTATTACATGGTTATATTTTTCTGTTTTGAGAAAACTAGTGCTTTTGGTCATGTCTTCTTTATCTAGTTTCTCATTTTTTGAAACATGTAACAAAGTTATATCCAAAATTTGAAAAACAAAAAAAGTTTCTTTTGTTATGTTTCTCACTTTTCAAAACTTTAATGAAACTGTTATGCAATATGGTCGTGAGACATGTTCTGTTCCTCTTACAAAAGTAAAAAATAAAACGCATGAATCAAGATATGATGAGGTTTGGAGATGACATTTATTTTTTCAATCCCTTCTTTCATATATGACAACTTGGTCTGATTTAGAAACCTCTCAACTGTGCTTGTAGGGATAGTTCACAAACCAAGAAGGGTTCCAACTCGTGGAAGACCTGGTAATGCCTCGAACATTGTAGAGTATGTTGCCCCTAAAGGACCTTCCTTCGAGCGAACGATGAAACACTGGTCGCACAAGAAAGTTGTGAGTATTACTCTCCAAACTTCTTTTCTTGTCAAGAACTTTTGATTATAGTAATATTGTTACAGTAGAGAATCATGCTTAGTGAGAGCGAATCACTCAAGTGAAAGTAAGATTACTTAAAATACATTAATGACATCATAAATCTAGTTTTCAATTACCTATGATAAAGTTGTAATCATCTAAGAATATATGAAGCCTACTTGAAATATCTTGATGCTTTGTTGCATAAATGAAGCTTGATTCTTCTTAACGTGTCATTATTTAGTAAGCAGGTGCTAGTACCCCTGGCGTAGGTGAAAATGGGTTGGATGTTGCATTGAGTGTTGAGTTTCTCATACTTTGTTTTTAATGTGACCTTTGTATAACTTCGAACTTCAATTCTATCCACAAGGCCCAACATGTGCTATCCATAAGAAATCATGAGTAAATGACACGACAAGGATTTAACAAAGGTCTCCGACTTCAGACGAAAAATCACTACTAAACTCGAAAGTTAAAGCTGATAAGTTAGATTCTATTTCAAAAACATAGTCTACAAAGTGCTAGTATTGAGATTACAGGCAACGGAAGGCTTGTCTTGTCTGAAAGTTACAGTGGTTTTGAATTGAATTGCAGTATCTTTCTGGACGGGTGGTGAGGGACCAGAACATCAAGTTGAAGCCAAACACAGTTCTTAGAGATGAAGAGGGGAAGTTGTGGCCAGCAAAAGTGTGTTCCATCAGCCAGAACCGTCTTGTTGTTAATGCTGGGTGGTCTGCATTTTACAAGGGCAATGGGTTGAGAGTAAATGACAAATGTGAATTTGAGTTTGTTCTCGAAAAGGGAAACTTATGCAGACAATTGAATGTCAAAGTTACTCACCGCCGTCGTTCTCTGCGTTGAACAATGCATACAGCAGAACCATACTTTCATTGTACAAATCCTTCTCTCTTTTGTGACCGATCTAACCATTGTGAAATTTGATGGTGATTTATTATACAACATGAGATCCTAAGTTTAAATCCTTGCCATCCTTACAAATTGCAATGTCGTTTTCGTCTTCATTTTGAGTTAATAATCGACGTGTTCTGCGCCTCATGAATTAAGTT

mRNA sequence

ATGATTCCGAAGAAGTTCGTGAAAGATCATGGCGAACTTTTATCCACTTCCGTACGTCTCAAGCTCCCGGACGGCATGGAATGGAAGGTCGGTTTGACGACGGCTCCCAACGGCGTTGTTTGGCTGCAAAATGGGTGGCACAAATTTGCAGAGCATTATAGCTTAGAGTTTGGTTCTTTGTTGGTATTTAAATCAGATGGGTTTTCAACTTTTCAAACATCCATATTCGACCCAAGTGGAGTGGAAACAGAATATTGTTGCATTCTTAACGATTCTAGAGCAGAATTTACAATGGAATATGAAGATTCTGATGAAAATACAGAGAGTTCCCCCCAGCGTTTAAGTAAGAGGAAGAACAAGCCTTCAGTTCCATCTCCTCCTCAATCTCGTAAGAAACTGAAAGCTGAAGAAGAAGGGTGCCTAATCATGAAGAACATGCCAAAAACTGAAGCAGGGGTATCAAGTAGAAGGCAACAATTTGTAAACAAACCTGAAGCAGCTCAAAGATTCACCTCAAAATCAGAGAAGCCTAGCTTTAAAATTGTGATGAAACAACCAAACGTGCGGGGAAAATTCGCCATGATTATCCCCAAAGATTTTGCAGAGGAACACTTACCTGATGACTTCGGAATCATCAAACTCCAAACCCCAAACGGTAGAAAGTGGCCACTTTTGTATAAACGCAGACGAAATCAAGAGAACTTTGTGTACTTTTCAAGTGGGTGGAAGCGTTTTGTAGAGGAAAATGTGTTGAAAGAAGGGGATATTGGGTTGTTTCAATTGATTAAGAAAGACATATTTTCATTCACCAAATTACAAGACACCTCTCCTTTTCCTTCCCTTGCAACAAAGACCAGAAACCCCTGTTTTGAGGCGAACATTCTGAACAGACGCCACAAGAAATTTGTTCTGAACATTCCTATGGTGTTTGCAAAGGAGCATTTTTCATCAGACATGCGCTCTGCAAAGCTTCAAGTTGGGAATAGACAATGGATAGTGGCATTGAGACAATATGGTAGCTCTGTCAGATTATCAGCTGGGTGGTGCTTATTTTATGGAGACAATGGCTTGGAAGATGGAGATTCATGCTTGTTTGAGATGAGCATACCACCGGCTTTTCAGAAGCATTTACATAGAACCTTTCCAATAAAAGCTACCATCAGAGATCATACAGGAAAATCATGGTGCGTTACATTGGAAAAAGTGGATGGACTTGTGTATTTCAAGAATGGCTGGCAGGCTTTTGTGGATTACCATTGTTTGAAGTATGGAGACTTTTTAGTATTTGGATATGATGGGGGTTTTACGTTTGATGTCAAAATATTTGGTAAAAATGGATGCAAGAAGGCAGTGGTTGCAGAAGCCGATAATTCTGTTCCAATTTTAGATTCAGTGTTAGCAATAGCGGGTAAGTCTCTTCCCATTTTGAAGGTCAAAGTAGAGGCTGTGGATGAGAAAGAAGAGGTCAAGCCTTTAATTTCTGGCAAGAGGAAACGATTACAAGTTGGATCAGGGATAGTTCACAAACCAAGAAGGGTTCCAACTCGTGGAAGACCTGGTAATGCCTCGAACATTGTAGAGTATGTTGCCCCTAAAGGACCTTCCTTCGAGCGAACGATGAAACACTGGTCGCACAAGAAAGTTTATCTTTCTGGACGGGTGGTGAGGGACCAGAACATCAAGTTGAAGCCAAACACAGTTCTTAGAGATGAAGAGGGGAAGTTGTGGCCAGCAAAAGTGTGTTCCATCAGCCAGAACCGTCTTGTTGTTAATGCTGGGTGGTCTGCATTTTACAAGGGCAATGGGTTGAGAGTAAATGACAAATGTGAATTTGAGTTTGTTCTCGAAAAGGGAAACTTATGCAGACAATTGAATGTCAAAGTTACTCACCGCCGTCGTTCTCTGCGTTGAACAATGCATACAGCAGAACCATACTTTCATTGTACAAATCCTTCTCTCTTTTGTGACCGATCTAACCATTGTGAAATTTGATGGTGATTTATTATACAACATGAGATCCTAAGTTTAAATCCTTGCCATCCTTACAAATTGCAATGTCGTTTTCGTCTTCATTTTGAGTTAATAATCGACGTGTTCTGCGCCTCATGAATTAAGTT

Coding sequence (CDS)

ATGATTCCGAAGAAGTTCGTGAAAGATCATGGCGAACTTTTATCCACTTCCGTACGTCTCAAGCTCCCGGACGGCATGGAATGGAAGGTCGGTTTGACGACGGCTCCCAACGGCGTTGTTTGGCTGCAAAATGGGTGGCACAAATTTGCAGAGCATTATAGCTTAGAGTTTGGTTCTTTGTTGGTATTTAAATCAGATGGGTTTTCAACTTTTCAAACATCCATATTCGACCCAAGTGGAGTGGAAACAGAATATTGTTGCATTCTTAACGATTCTAGAGCAGAATTTACAATGGAATATGAAGATTCTGATGAAAATACAGAGAGTTCCCCCCAGCGTTTAAGTAAGAGGAAGAACAAGCCTTCAGTTCCATCTCCTCCTCAATCTCGTAAGAAACTGAAAGCTGAAGAAGAAGGGTGCCTAATCATGAAGAACATGCCAAAAACTGAAGCAGGGGTATCAAGTAGAAGGCAACAATTTGTAAACAAACCTGAAGCAGCTCAAAGATTCACCTCAAAATCAGAGAAGCCTAGCTTTAAAATTGTGATGAAACAACCAAACGTGCGGGGAAAATTCGCCATGATTATCCCCAAAGATTTTGCAGAGGAACACTTACCTGATGACTTCGGAATCATCAAACTCCAAACCCCAAACGGTAGAAAGTGGCCACTTTTGTATAAACGCAGACGAAATCAAGAGAACTTTGTGTACTTTTCAAGTGGGTGGAAGCGTTTTGTAGAGGAAAATGTGTTGAAAGAAGGGGATATTGGGTTGTTTCAATTGATTAAGAAAGACATATTTTCATTCACCAAATTACAAGACACCTCTCCTTTTCCTTCCCTTGCAACAAAGACCAGAAACCCCTGTTTTGAGGCGAACATTCTGAACAGACGCCACAAGAAATTTGTTCTGAACATTCCTATGGTGTTTGCAAAGGAGCATTTTTCATCAGACATGCGCTCTGCAAAGCTTCAAGTTGGGAATAGACAATGGATAGTGGCATTGAGACAATATGGTAGCTCTGTCAGATTATCAGCTGGGTGGTGCTTATTTTATGGAGACAATGGCTTGGAAGATGGAGATTCATGCTTGTTTGAGATGAGCATACCACCGGCTTTTCAGAAGCATTTACATAGAACCTTTCCAATAAAAGCTACCATCAGAGATCATACAGGAAAATCATGGTGCGTTACATTGGAAAAAGTGGATGGACTTGTGTATTTCAAGAATGGCTGGCAGGCTTTTGTGGATTACCATTGTTTGAAGTATGGAGACTTTTTAGTATTTGGATATGATGGGGGTTTTACGTTTGATGTCAAAATATTTGGTAAAAATGGATGCAAGAAGGCAGTGGTTGCAGAAGCCGATAATTCTGTTCCAATTTTAGATTCAGTGTTAGCAATAGCGGGTAAGTCTCTTCCCATTTTGAAGGTCAAAGTAGAGGCTGTGGATGAGAAAGAAGAGGTCAAGCCTTTAATTTCTGGCAAGAGGAAACGATTACAAGTTGGATCAGGGATAGTTCACAAACCAAGAAGGGTTCCAACTCGTGGAAGACCTGGTAATGCCTCGAACATTGTAGAGTATGTTGCCCCTAAAGGACCTTCCTTCGAGCGAACGATGAAACACTGGTCGCACAAGAAAGTTTATCTTTCTGGACGGGTGGTGAGGGACCAGAACATCAAGTTGAAGCCAAACACAGTTCTTAGAGATGAAGAGGGGAAGTTGTGGCCAGCAAAAGTGTGTTCCATCAGCCAGAACCGTCTTGTTGTTAATGCTGGGTGGTCTGCATTTTACAAGGGCAATGGGTTGAGAGTAAATGACAAATGTGAATTTGAGTTTGTTCTCGAAAAGGGAAACTTATGCAGACAATTGAATGTCAAAGTTACTCACCGCCGTCGTTCTCTGCGTTGA

Protein sequence

MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNKPSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFKIVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHCLKYGDFLVFGYDGGFTFDVKIFGKNGCKKAVVAEADNSVPILDSVLAIAGKSLPILKVKVEAVDEKEEVKPLISGKRKRLQVGSGIVHKPRRVPTRGRPGNASNIVEYVAPKGPSFERTMKHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEGKLWPAKVCSISQNRLVVNAGWSAFYKGNGLRVNDKCEFEFVLEKGNLCRQLNVKVTHRRRSLR

Homology

[Close]

BLAST of Carg05238 vs. NCBI nr
Match: KAG7027078.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK
Sbjct: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK
Sbjct: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK
Sbjct: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360

Query: 361 DSCLFEMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHC 420
           DSCLFEMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHC
Sbjct: 361 DSCLFEMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHC 420

Query: 421 LKYGDFLVFGYDGGFTFDVKIFGKNGCKKAVVAEADNSVPILDSVLAIAGKSLPILKVKV 480
           LKYGDFLVFGYDGGFTFDVKIFGKNGCKKAVVAEADNSVPILDSVLAIAGKSLPILKVKV
Sbjct: 421 LKYGDFLVFGYDGGFTFDVKIFGKNGCKKAVVAEADNSVPILDSVLAIAGKSLPILKVKV 480

Query: 481 EAVDEKEEVKPLISGKRKRLQVGSGIVHKPRRVPTRGRPGNASNIVEYVAPKGPSFERTM 540
           EAVDEKEEVKPLISGKRKRLQVGSGIVHKPRRVPTRGRPGNASNIVEYVAPKGPSFERTM
Sbjct: 481 EAVDEKEEVKPLISGKRKRLQVGSGIVHKPRRVPTRGRPGNASNIVEYVAPKGPSFERTM 540

Query: 541 KHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEGKLWPAKVCSISQNRLVVNAGWSAFYKG 600
           KHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEGKLWPAKVCSISQNRLVVNAGWSAFYKG
Sbjct: 541 KHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEGKLWPAKVCSISQNRLVVNAGWSAFYKG 600

Query: 601 NGLRVNDKCEFEFVLEKGNLCRQLNVKVTHRRRSLR 637
           NGLRVNDKCEFEFVLEKGNLCRQLNVKVTHRRRSLR
Sbjct: 601 NGLRVNDKCEFEFVLEKGNLCRQLNVKVTHRRRSLR 636

[Close]

BLAST of Carg05238 vs. NCBI nr
Match: XP_022962673.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 733.4 bits (1892), Expect = 1.7e-207
Identity = 361/367 (98.37%), Postives = 363/367 (98.91%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTME EDSDENTESS QRLSKRKNK
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEDEDSDENTESSSQRLSKRKNK 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKK+KAEEEGCLIMKNMPKTEAGVSSRRQQFVNK EAAQRFTSKSEKPSFK
Sbjct: 143 PSVPSPPQSRKKMKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKLEAAQRFTSKSEKPSFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAE+HLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPS ATKTRNPCFEANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATKTRNPCFEANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 389

[Close]

BLAST of Carg05238 vs. NCBI nr
Match: XP_023517302.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 730.3 bits (1884), Expect = 1.4e-206
Identity = 357/367 (97.28%), Postives = 360/367 (98.09%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCI NDSRAEFTMEYEDSDENTESSP RLSKRKNK
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTMEYEDSDENTESSPLRLSKRKNK 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKK+K EEEGCLI+KNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKP FK
Sbjct: 143 PSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPIFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAM IPKDFAE+HLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPS AT TRNPCFEANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATNTRNPCFEANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 389

[Close]

BLAST of Carg05238 vs. NCBI nr
Match: XP_022962674.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 726.9 bits (1875), Expect = 1.5e-205
Identity = 360/367 (98.09%), Postives = 362/367 (98.64%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTME EDSDENTESS QRLSKRKNK
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEDEDSDENTESSSQRLSKRKNK 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKK+KA EEGCLIMKNMPKTEAGVSSRRQQFVNK EAAQRFTSKSEKPSFK
Sbjct: 143 PSVPSPPQSRKKMKA-EEGCLIMKNMPKTEAGVSSRRQQFVNKLEAAQRFTSKSEKPSFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAE+HLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPS ATKTRNPCFEANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATKTRNPCFEANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 388

[Close]

BLAST of Carg05238 vs. NCBI nr
Match: XP_023517303.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 723.8 bits (1867), Expect = 1.3e-204
Identity = 356/367 (97.00%), Postives = 359/367 (97.82%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCI NDSRAEFTMEYEDSDENTESSP RLSKRKNK
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTMEYEDSDENTESSPLRLSKRKNK 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKK+K  EEGCLI+KNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKP FK
Sbjct: 143 PSVPSPPQSRKKMK-PEEGCLIIKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPIFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAM IPKDFAE+HLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPS AT TRNPCFEANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATNTRNPCFEANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 388

[Close]

BLAST of Carg05238 vs. ExPASy Swiss-Prot
Match: Q9FGD2 (Putative B3 domain-containing protein At5g66980 OS=Arabidopsis thaliana OX=3702 GN=At5g66980 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-26
Identity = 89/299 (29.77%), Postives = 134/299 (44.82%), Query Frame = 0


Query: 366 EMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDG----LVYFKNGWQAFVDYHCL 425
           E+ IPPAF   L +  P +A + D  G+ WCV  +  D      V+F  GWQ+F +   L
Sbjct: 22  ELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFFTKGWQSFANDQSL 81

Query: 426 KYGDFLVFGYDGGFTFDVKIFGKNGCKK--AVVAEADNSVPILDSVL------------- 485
           ++GDFLVF YDG   F V IF  +GCKK   VV+  D S   LD                
Sbjct: 82  EFGDFLVFSYDGDSRFSVTIFANDGCKKDVGVVSTTDRSRVSLDEEEPDDIFTKPDRMRD 141

Query: 486 AIAGKSLPILKVKVEA-------VDEKEE------VKPLISGKRKRLQVGSGIVHKPRRV 545
              G+S+   + +          VD+K E       KP  S K +R    +G        
Sbjct: 142 CDCGQSINRKRKRDSVNEDPHVLVDDKPEYVSTYKTKPEHSEKTQRTVNRAGDTCDISWF 201

Query: 546 PTRGRPGNASNIVEYVAPKGPSFERTMKHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEG 605
           P +   G   ++ +   PK P F R +   S +K+ L    +R   I+L+ +  L DE G
Sbjct: 202 PEKKHNGFEESVYK---PKHPHFVRNITRGSLQKLELPLTFLRSNGIELEEDIELCDESG 261

Query: 606 KLWPAKVCSISQNRLVVNAGWSAFYKGNGLRVNDKCEFEFVLEKGNLCRQLNVKVTHRR 633
           K WP K+ +  +     +  W  F K + + + +KC FEF++     C ++ V++   R
Sbjct: 262 KKWPLKILNHDRGFKFSHESWLCFCKSHEMILTNKCLFEFIVPSNGRCSEILVRIVSGR 317

[Close]

BLAST of Carg05238 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.2e-21
Identity = 94/312 (30.13%), Postives = 140/312 (44.87%), Query Frame = 0


Query: 2   IPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSLL 61
           +P KFV    + LS +V L +PDG  W+VGL  A N  +W Q+GW +F + YS+  G LL
Sbjct: 22  VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQDGWQEFVDRYSIRIGYLL 81

Query: 62  VFKSDGFSTFQTSIFDPSGVETEYCCI-LNDS------RAEFTMEYEDSD---------- 121
           +F+ +G S F   IF+ S  E  Y    L DS      RA    + ED D          
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVY 141

Query: 122 -----ENT--------ESSPQRLSKRKNKPSVPSP----PQSRKKLKAEEEGCLIMKNMP 181
                E+T         S+ Q L     K   P+P    P+ R + K   +   I  + P
Sbjct: 142 PSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAP 201

Query: 182 KTEAGVSSRRQQFVNKPEAAQRFTSKSEK--------------PSFKIVMKQPNVRGKFA 241
           + +      R +F     A +R  +  E+              P F++V++   +     
Sbjct: 202 RDDD--PENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCI 261

Query: 242 MIIPKDFAEEHLPDDFGIIKLQTPNGRKWPL--LYKRRRNQENFVYFSSGWKRFVEENVL 264
           M +P  FAE++L    G IK+Q    ++WP+  LYK  R +     FS GW  F  EN L
Sbjct: 262 MYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYKAGRAK-----FSQGWYEFTLENNL 321

[Close]

BLAST of Carg05238 vs. ExPASy Swiss-Prot
Match: Q851V5 (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.4e-20
Identity = 108/468 (23.08%), Postives = 188/468 (40.17%), Query Frame = 0


Query: 2   IPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSLL 61
           IP KF ++  + +  +++LK  +G    V +    N +V L  GW +FA  + ++ G  L
Sbjct: 164 IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLV-LTKGWAEFANSHDIKMGDFL 223

Query: 62  VFKSDGFSTFQTSIFDPSG-VETEYCCILNDSRAEFTMEYED------SDENTESSPQRL 121
           VF+  G S F+  IFDPSG V+      +N  +    M+ +       SDE+  +     
Sbjct: 224 VFRYTGNSQFEVKIFDPSGCVKAASHNAVNIGQHAQNMQGDPIEILSCSDEHLRAQ-SLT 283

Query: 122 SKRKNKPSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKS 181
           ++R+N+P         KK+K E            T      + ++ V            S
Sbjct: 284 TERQNQPEKDVIDNCNKKMKTEHASSSEDDQETPTAEVHRMKVEEMVR--------AIHS 343

Query: 182 EKPSFKIVMKQPNV-RGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQE 241
             P F  VMK+ NV R    + I + +A E+ P    ++ LQ  +G++W + +   + + 
Sbjct: 344 NHPVFVAVMKKSNVTRQPCYVAISRKYANEYFPGGDQMLTLQR-HGKRWQVKFCISKRKL 403

Query: 242 NFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEAN 301
             +  S GW++F  +N                     +LQ  +P     T   +P F   
Sbjct: 404 RML--SKGWRKFTRDN---------------------ELQHWAPLALFITLFFSPHF--- 463

Query: 302 ILNRRHKKFVLNIPMVFAKEHFSSDMRS--AKLQVGNRQWIVALRQYGSSVRLSAGWCLF 361
              R+ KK    +  +  +     D      K+ +G+                      F
Sbjct: 464 ---RKMKKCGQKMRKLNTRSTARDDQEKYFFKVMIGD----------------------F 523

Query: 362 YGDNGLEDGDSCLFEMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNG 421
           +              M+IP  F +H          +   +G ++ V + K   ++   +G
Sbjct: 524 HK------------RMTIPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSG 557

Query: 422 WQAFVDYHCLKYGDFLVFGYDGGFTFDVKIFGKNGCKKAVVAEADNSV 460
           W++FV+ H L  GDFLVF Y+G F   V IF  +GC+K+     +N++
Sbjct: 584 WESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAI 557

[Close]

BLAST of Carg05238 vs. ExPASy Swiss-Prot
Match: Q7XS74 (Putative B3 domain-containing protein Os04g0347400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0347400 PE=3 SV=3)

HSP 1 Score: 74.7 bits (182), Expect = 4.2e-12
Identity = 68/271 (25.09%), Postives = 113/271 (41.70%), Query Frame = 0


Query: 366 EMSIPPAFQKHL----HRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHCL 425
           +M IP  F +H     H    + A+I    GK W + LEK +  ++FK GW  F+ +H +
Sbjct: 164 KMRIPAKFVQHYIAEEHLNIHM-ASILSPLGKFWRIELEKDELGMFFKGGWLQFLSFHGI 223

Query: 426 KYGDFLVFGYDGGFTFDVKIFGKNGCKKAVVAEADNSVPIL-----DSVLAIAGKSLPIL 485
             GD ++  ++G   F +K+FG NGCKK +  + D ++        ++      K     
Sbjct: 224 SPGDVVLLRHEGNLVFKIKVFGINGCKKDLKTKDDITIQQSARNQHETPSFSTRKCNKNS 283

Query: 486 KVKVEAVDEKEEVKPLISGKRKRLQVGSGIVHKPRRVPTRGRPGNASNIVEYVAPKGPSF 545
           +   +  ++ +E+   I G RK          K R      RP  + +I E   P     
Sbjct: 284 RFGEDCKNQLQEIPCSIKGSRK----------KGRETK---RPKKSKSIYEIGPPSWIKK 343

Query: 546 ERTMKHWSHKKVYLSG------RVVRDQNIKLKPNTV---LRDEEGKLWPAKVCSISQNR 605
           E +     +  + L G       +V +  I L  N+          + W    CS+++N 
Sbjct: 344 EISNYMLENGNISLPGIFCKSIGLVEETTITLMINSSRGRSSSSSSRSWEV-ACSVNKNG 403

Query: 606 L----VVNAGWSAFYKGNGLRVNDKCEFEFV 615
                ++ +GW  F + NGL V D C F  V
Sbjct: 404 YGCCNLLPSGWKRFCQANGLLVGDVCTFSVV 419

[Close]

BLAST of Carg05238 vs. ExPASy Swiss-Prot
Match: Q8LAV5 (B3 domain-containing protein REM20 OS=Arabidopsis thaliana OX=3702 GN=REM20 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 5.5e-12
Identity = 65/274 (23.72%), Postives = 116/274 (42.34%), Query Frame = 0


Query: 361 DSCLFEMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHC 420
           +S    + IP  F   L    P    ++   GK W V+L+K+ G  Y   GW  F + H 
Sbjct: 18  ESASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHE 77

Query: 421 LKYGDFLVFGYDGGFTFDVKIFGKNGCK--KAVVAEADNSVPILDSVLAIAGKSLPILKV 480
           LK G+F+ F YDG  TF+V +F + G K  +A +     S    DSV+     S  +++ 
Sbjct: 78  LKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVED 137

Query: 481 KVEAVDEKEEVKPLISGKRKRLQVGSGIVHKPRRVPTRGRPGNASNIVEYVAPKGPSFER 540
             +  ++++E       + + +      + +          GN    ++  A   P F  
Sbjct: 138 DDDEDEDEDEDDDGSFDEDEEISQSLYPIDEETATDAAVFEGN----LDVEALTNPHFPT 197

Query: 541 TMKHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEGKLWPAKVCSISQNRLVVNAGWSAFY 600
           T+K+  + ++ +   VV+D N++   +    D EG L    +     ++ V   GW    
Sbjct: 198 TLKNRIY-ELLIPANVVKDNNLEFGSSIKYIDGEGTL--VGLRGKWADKRVCFKGWDRIC 257

Query: 601 KGNGLRVN-DKCEFEFVLEKGNLCRQLNVKVTHR 632
           + N L+ + D  E E + +   +   + V V  R
Sbjct: 258 RRNRLKKHQDTVECELLHDDQKMVHSIRVHVLRR 284

[Close]

BLAST of Carg05238 vs. ExPASy TrEMBL
Match: A0A6J1HFG5 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463094 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 8.0e-208
Identity = 361/367 (98.37%), Postives = 363/367 (98.91%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTME EDSDENTESS QRLSKRKNK
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEDEDSDENTESSSQRLSKRKNK 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKK+KAEEEGCLIMKNMPKTEAGVSSRRQQFVNK EAAQRFTSKSEKPSFK
Sbjct: 143 PSVPSPPQSRKKMKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKLEAAQRFTSKSEKPSFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAE+HLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPS ATKTRNPCFEANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATKTRNPCFEANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 389

[Close]

BLAST of Carg05238 vs. ExPASy TrEMBL
Match: A0A6J1HHR8 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463094 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 7.5e-206
Identity = 360/367 (98.09%), Postives = 362/367 (98.64%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTME EDSDENTESS QRLSKRKNK
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEDEDSDENTESSSQRLSKRKNK 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKK+KA EEGCLIMKNMPKTEAGVSSRRQQFVNK EAAQRFTSKSEKPSFK
Sbjct: 143 PSVPSPPQSRKKMKA-EEGCLIMKNMPKTEAGVSSRRQQFVNKLEAAQRFTSKSEKPSFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAE+HLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPS ATKTRNPCFEANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATKTRNPCFEANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 388

[Close]

BLAST of Carg05238 vs. ExPASy TrEMBL
Match: A0A6J1KQQ1 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496775 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 1.6e-200
Identity = 347/367 (94.55%), Postives = 356/367 (97.00%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKD+GELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDYGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCIL+DSRAEFTME EDSDENTESSPQRLSKRKN 
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCILHDSRAEFTMEDEDSDENTESSPQRLSKRKNN 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
            SVPSPPQSRKK+K EEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQR TSKS+KPSFK
Sbjct: 143 ASVPSPPQSRKKMKPEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRLTSKSDKPSFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAE+HLPDDFGIIKL+TPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLRTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGD+GLFQLIKKDIFSFTKLQDT PF S  TKTRNPCF+ANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDVGLFQLIKKDIFSFTKLQDTPPFASPPTKTRNPCFKANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAK HFS+DM SAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKAHFSTDMLSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 389

[Close]

BLAST of Carg05238 vs. ExPASy TrEMBL
Match: A0A6J1KN14 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496775 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 1.5e-198
Identity = 346/367 (94.28%), Postives = 355/367 (96.73%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKD+GELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDYGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCIL+DSRAEFTME EDSDENTESSPQRLSKRKN 
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCILHDSRAEFTMEDEDSDENTESSPQRLSKRKNN 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
            SVPSPPQSRKK+K  EEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQR TSKS+KPSFK
Sbjct: 143 ASVPSPPQSRKKMK-PEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRLTSKSDKPSFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAE+HLPDDFGIIKL+TPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLRTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGD+GLFQLIKKDIFSFTKLQDT PF S  TKTRNPCF+ANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDVGLFQLIKKDIFSFTKLQDTPPFASPPTKTRNPCFKANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAK HFS+DM SAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKAHFSTDMLSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 382

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 388

[Close]

BLAST of Carg05238 vs. ExPASy TrEMBL
Match: A0A6J1HFS2 (B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463094 PE=4 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 2.4e-196
Identity = 347/367 (94.55%), Postives = 349/367 (95.10%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 60
           MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL
Sbjct: 23  MIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSL 82

Query: 61  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEYEDSDENTESSPQRLSKRKNK 120
           LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTME EDSDENTESS QRLSKRKNK
Sbjct: 83  LVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTMEDEDSDENTESSSQRLSKRKNK 142

Query: 121 PSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPSFK 180
           PSVPSPPQSRKK+KAEE              GVSSRRQQFVNK EAAQRFTSKSEKPSFK
Sbjct: 143 PSVPSPPQSRKKMKAEE--------------GVSSRRQQFVNKLEAAQRFTSKSEKPSFK 202

Query: 181 IVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 240
           IVMKQPNVRGKFAMIIPKDFAE+HLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS
Sbjct: 203 IVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSS 262

Query: 241 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSLATKTRNPCFEANILNRRHK 300
           GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPS ATKTRNPCFEANILNRRHK
Sbjct: 263 GWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATKTRNPCFEANILNRRHK 322

Query: 301 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 360
           KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG
Sbjct: 323 KFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDG 375

Query: 361 DSCLFEM 368
           DSCLFEM
Sbjct: 383 DSCLFEM 375

[Close]

BLAST of Carg05238 vs. TAIR 10
Match: AT5G66980.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-27
Identity = 89/299 (29.77%), Postives = 134/299 (44.82%), Query Frame = 0


Query: 366 EMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDG----LVYFKNGWQAFVDYHCL 425
           E+ IPPAF   L +  P +A + D  G+ WCV  +  D      V+F  GWQ+F +   L
Sbjct: 22  ELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFFTKGWQSFANDQSL 81

Query: 426 KYGDFLVFGYDGGFTFDVKIFGKNGCKK--AVVAEADNSVPILDSVL------------- 485
           ++GDFLVF YDG   F V IF  +GCKK   VV+  D S   LD                
Sbjct: 82  EFGDFLVFSYDGDSRFSVTIFANDGCKKDVGVVSTTDRSRVSLDEEEPDDIFTKPDRMRD 141

Query: 486 AIAGKSLPILKVKVEA-------VDEKEE------VKPLISGKRKRLQVGSGIVHKPRRV 545
              G+S+   + +          VD+K E       KP  S K +R    +G        
Sbjct: 142 CDCGQSINRKRKRDSVNEDPHVLVDDKPEYVSTYKTKPEHSEKTQRTVNRAGDTCDISWF 201

Query: 546 PTRGRPGNASNIVEYVAPKGPSFERTMKHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEG 605
           P +   G   ++ +   PK P F R +   S +K+ L    +R   I+L+ +  L DE G
Sbjct: 202 PEKKHNGFEESVYK---PKHPHFVRNITRGSLQKLELPLTFLRSNGIELEEDIELCDESG 261

Query: 606 KLWPAKVCSISQNRLVVNAGWSAFYKGNGLRVNDKCEFEFVLEKGNLCRQLNVKVTHRR 633
           K WP K+ +  +     +  W  F K + + + +KC FEF++     C ++ V++   R
Sbjct: 262 KKWPLKILNHDRGFKFSHESWLCFCKSHEMILTNKCLFEFIVPSNGRCSEILVRIVSGR 317

[Close]

BLAST of Carg05238 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-22
Identity = 94/312 (30.13%), Postives = 140/312 (44.87%), Query Frame = 0


Query: 2   IPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSLL 61
           +P KFV    + LS +V L +PDG  W+VGL  A N  +W Q+GW +F + YS+  G LL
Sbjct: 22  VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQDGWQEFVDRYSIRIGYLL 81

Query: 62  VFKSDGFSTFQTSIFDPSGVETEYCCI-LNDS------RAEFTMEYEDSD---------- 121
           +F+ +G S F   IF+ S  E  Y    L DS      RA    + ED D          
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVY 141

Query: 122 -----ENT--------ESSPQRLSKRKNKPSVPSP----PQSRKKLKAEEEGCLIMKNMP 181
                E+T         S+ Q L     K   P+P    P+ R + K   +   I  + P
Sbjct: 142 PSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAP 201

Query: 182 KTEAGVSSRRQQFVNKPEAAQRFTSKSEK--------------PSFKIVMKQPNVRGKFA 241
           + +      R +F     A +R  +  E+              P F++V++   +     
Sbjct: 202 RDDD--PENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCI 261

Query: 242 MIIPKDFAEEHLPDDFGIIKLQTPNGRKWPL--LYKRRRNQENFVYFSSGWKRFVEENVL 264
           M +P  FAE++L    G IK+Q    ++WP+  LYK  R +     FS GW  F  EN L
Sbjct: 262 MYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYKAGRAK-----FSQGWYEFTLENNL 321

[Close]

BLAST of Carg05238 vs. TAIR 10
Match: AT5G18000.1 (VERDANDI )

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-13
Identity = 72/273 (26.37%), Postives = 120/273 (43.96%), Query Frame = 0


Query: 1   MIPKKFVKDHGELLST-SVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGS 60
           MIP   ++   +  S+  + L++P G  W+V ++  PN       GW++F     L    
Sbjct: 36  MIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLGENE 95

Query: 61  LLVFKSDGFSTFQTSIFDPSGVE------TEYCCILNDSRAEFTMEYED--SDENTESSP 120
            L F  +    F  +IF+  G E      T       + R E    Y+D   +E  ES  
Sbjct: 96  YLTFTHEANMCFNVTIFEADGTEMLRPRKTITSSSGRNKREERKSIYKDVKKEEEIESWS 155

Query: 121 QRLSKRKNKPSVPSPPQSRKKLKAEEEGCLIMKNMPKTEAGVSSRRQQFVNKPEAAQRFT 180
           +      + P   +   +  +L  ++E  L  K   KTE   +S++++       ++  T
Sbjct: 156 E-----SSHPCHKTAESTSGRLTQKQELNLRKKEADKTEKSKTSKKKKVETVSNDSEAGT 215

Query: 181 SKSEKPSFKIVMKQPNVRGKFAMIIPKDFAEEHLPDDFGIIKLQTPNGRK-WPLLYKRRR 240
           S S  P FK+ +K+ ++     + IPK F + H+P +  + K+  P G+K W + Y    
Sbjct: 216 S-SLIPEFKLTIKKSHL---LFLGIPKKFVDMHMPTETTMFKIHYPRGKKSWDVTYVVTD 275

Query: 241 NQENFVYFSSGWKRFVEENVLKEGDIGLFQLIK 264
            Q     FS GW R  +E  L  GD+  F+LIK
Sbjct: 276 VQSR---FSGGWSRLAKELGLLVGDVCTFKLIK 296

[Close]

BLAST of Carg05238 vs. TAIR 10
Match: AT3G53310.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 74.3 bits (181), Expect = 3.9e-13
Identity = 65/274 (23.72%), Postives = 116/274 (42.34%), Query Frame = 0


Query: 361 DSCLFEMSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHC 420
           +S    + IP  F   L    P    ++   GK W V+L+K+ G  Y   GW  F + H 
Sbjct: 18  ESASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHE 77

Query: 421 LKYGDFLVFGYDGGFTFDVKIFGKNGCK--KAVVAEADNSVPILDSVLAIAGKSLPILKV 480
           LK G+F+ F YDG  TF+V +F + G K  +A +     S    DSV+     S  +++ 
Sbjct: 78  LKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVED 137

Query: 481 KVEAVDEKEEVKPLISGKRKRLQVGSGIVHKPRRVPTRGRPGNASNIVEYVAPKGPSFER 540
             +  ++++E       + + +      + +          GN    ++  A   P F  
Sbjct: 138 DDDEDEDEDEDDDGSFDEDEEISQSLYPIDEETATDAAVFEGN----LDVEALTNPHFPT 197

Query: 541 TMKHWSHKKVYLSGRVVRDQNIKLKPNTVLRDEEGKLWPAKVCSISQNRLVVNAGWSAFY 600
           T+K+  + ++ +   VV+D N++   +    D EG L    +     ++ V   GW    
Sbjct: 198 TLKNRIY-ELLIPANVVKDNNLEFGSSIKYIDGEGTL--VGLRGKWADKRVCFKGWDRIC 257

Query: 601 KGNGLRVN-DKCEFEFVLEKGNLCRQLNVKVTHR 632
           + N L+ + D  E E + +   +   + V V  R
Sbjct: 258 RRNRLKKHQDTVECELLHDDQKMVHSIRVHVLRR 284

[Close]

BLAST of Carg05238 vs. TAIR 10
Match: AT4G34400.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-10
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 367 MSIPPAFQKHLHRTFPIKATIRDHTGKSWCVTLEKVDGLVYFKNGWQAFVDYHCLKYGDF 426
           M IP ++  H+   FP    +R   G SW V  E  D  V F  GW  FV  + L  GDF
Sbjct: 29  MVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPKFVRDNTLNDGDF 88

Query: 427 LVFGYDGGFTFDVKIF-GKNGCKK-AVVAEADNSVPILDSVLAIAGK 472
           L F Y+G   F+V IF G + CK+ + V E +      DSV++++ +
Sbjct: 89  LTFAYNGAHIFEVSIFRGYDACKEISEVTELEEEEE--DSVISLSSE 133

The following BLAST results are available for this feature:

BLAST of Carg05238 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027078.1	0.0e+00	100.00	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022962673.1	1.7e-207	98.37	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moscha...	[more]
XP_023517302.1	1.4e-206	97.28	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo s...	[more]
XP_022962674.1	1.5e-205	98.09	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moscha...	[more]
XP_023517303.1	1.3e-204	97.00	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita pepo s...	[more]

BLAST of Carg05238 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGD2	2.3e-26	29.77	Putative B3 domain-containing protein At5g66980 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8L3W1	2.2e-21	30.13	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q851V5	2.4e-20	23.08	Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni...	[more]
Q7XS74	4.2e-12	25.09	Putative B3 domain-containing protein Os04g0347400 OS=Oryza sativa subsp. japoni...	[more]
Q8LAV5	5.5e-12	23.72	B3 domain-containing protein REM20 OS=Arabidopsis thaliana OX=3702 GN=REM20 PE=1...	[more]

BLAST of Carg05238 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFG5	8.0e-208	98.37	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1HHR8	7.5e-206	98.09	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1KQQ1	1.6e-200	94.55	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1KN14	1.5e-198	94.28	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1HFS2	2.4e-196	94.55	B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita mosc...	[more]

BLAST of Carg05238 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66980.1	1.6e-27	29.77	AP2/B3-like transcriptional factor family protein	[more]
AT3G18990.1	1.6e-22	30.13	AP2/B3-like transcriptional factor family protein	[more]
AT5G18000.1	2.3e-13	26.37	VERDANDI	[more]
AT3G53310.1	3.9e-13	23.72	AP2/B3-like transcriptional factor family protein	[more]
AT4G34400.1	1.8e-10	36.45	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 179..275 e-value: 7.8E-20 score: 81.9 coord: 290..445 e-value: 2.3E-8 score: 43.8 coord: 1..79 e-value: 7.8E-5 score: 32.1 coord: 536..634 e-value: 2.3E-5 score: 33.8
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 367..444 e-value: 7.2E-13 score: 48.3 coord: 179..265 e-value: 8.7E-18 score: 64.1 coord: 544..619 e-value: 4.3E-9 score: 36.2 coord: 1..76 e-value: 3.6E-10 score: 39.6
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 567..628 score: 10.122705
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 1..79 score: 14.057025
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 289..366 score: 8.543339
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 179..275 score: 15.044129
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 367..445 score: 12.393047
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 1..77 e-value: 1.852E-12 score: 61.5749
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 534..621 e-value: 1.11833E-10 score: 56.5673
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 362..442 e-value: 3.07478E-16 score: 72.3605
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 177..265 e-value: 3.29358E-22 score: 89.6944
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 157..272 e-value: 1.9E-25 score: 90.9 coord: 519..632 e-value: 7.1E-13 score: 50.4 coord: 280..367 e-value: 1.1E-17 score: 65.9
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 1..81 e-value: 1.1E-16 score: 62.5 coord: 368..447 e-value: 6.6E-21 score: 76.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 531..618
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 174..271
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 367..447
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 284..367
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 1..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..138
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 1..264 coord: 282..367 coord: 368..620

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05238-RA	Carg05238-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding