Carg05223 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05223
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ATP-dependent RNA helicase eIF4A isoform X2
Location	Carg_Chr07: 3602136 .. 3605878 (+)
RNA-Seq Expression	Carg05223
Synteny	Carg05223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATTTTAACTCAGTAGTCACAAGGCAGAAGAGAAGCACGTGAGGTTTGTGTTCAGGAAAGACCTCAGCCCTCGAACTTGGGAGCAGGCAGGTGAGAGCGCTGTGCAGCGGTGCAGCGACCATGGCAATTGATGGAATTGAAGCCTTCTCGCCTCCCTCTCACCCATCTTCCCATTTCAGGTATTGCTGTTGCTGCCGCCCTCTTTTGTATTTTACAAACCTTTCTTCCGATATCCAGTGATCCCCATTTTGTTTCGCTTTCTCAGTCAACAGCGCCACTTCTATGTTGCCGTCGACAGGCTCCAGTTCAAGATGGTCCTCTTCTCTCAATCTACGCTCACGCACATTTTTTGGATTTCAATTCCTATGTTTGGTTGATATTTTTTTGTTGGGTTTTGCTTTGCTCGGTCAATTTTTTTTTCTTCCTATTCCTTTTATACGGTGTGTATTTGGCAGGAAACATTAGTGGGTTTGTTGGACGTAGCCGGTCGCCGTCCGTCCTTGCCGATGATTGTGTGTTGTAGTTCTCGCGACGAGCTCGATGCTGTCTGCTCCGCTGTCTCCAACCTCCAATACATCTCTTTGGCATCTTTGGTATCGTTATTTTTGCTCAATAAAAGTTTTTCTATACGAAATTCGTGAAATGCGTCTAGAAATTCCCAACCCTGAGCCTGATATATGCATCATTTTGTGCCACTGAATGAATAATTTGATCTCGAAGCAACGACTTACCTGAGTTGATATTCAATTTGATCATGAGTCATGACCTTACTTTGGACAGGATCGGTTCTATAGGTTTATTGTTAATCTGGATCCTAGTTCTGTGGATAAGACGCCTGAACTGGTAGAGTGCCATCAGTATACTGGTAATCCCTAATATTAATATACTGAAGCAGGCTGTAGTAAATAATTTCAATCGGTAATGGAAACCAACTGATGAAACTAACCAATATGAATCCTAATTGTGCTAGCTAGATGATAGAAATGCTTTTAGGATAGAATTAGGAGTATTATTAAGGCATTAAGGTATATTAGTAATTAATTAGAGTAGTTATGATGATTTATTATTAATAGAGTGAGAAAGGATGGAGGTAGGCAATTGTTTAGATGGTTTAAGCTTGAGAGTGTATGCTCAAGAGTGAGGAGGTTCCAAGTATCTCAAATACTCAGCATATCTTGTATTTCTTCTATCTCATATCTTTAAATATCCTTTTAGTTGTTTGGGTCCTAAGTCACTAGATTAGCATCCTTTTTTTTTCCACTGATGATTTTAGTTCACATCATCACATGGATGTTGTCTTAAACTCCTGTCGACATAGTAGTGATGTAGGAGTTGGTTATAATAGTTCGGTATTATTTTTTTAGTTTTTAAAGTACTTAGCTGTTAAATCCTCTATAAATAAAGCGTTAATCTCTTGCATTAGCTTACTTTGAATCATCATGAAATCCTTTGAGTTATAATTCTGGGAGAATTCTACTTATGATTTAGGCTACACCGCTTGTCTTAATTCTTTTTTTGTTAAGTGATGGGAAGTGTTGATTGAATATCAATTGATTTGATGATAAGATCACCCTATACAATTTACCGTTTTCAGTATCCTCCATCATACAGTTTTTGAATACTGCTATATTATTTTGACCCCGTCTGCAGCCATTGGTTGTTTCTGTTGTATGTTCATTTACTTTTACTTTGTGGTTGTTACAGTTTTAGGATCAAGTTTTTGCACTAGTTTTTACTTCTTTTTGCAAGGGAAAATTACCCCTTGTTAAATCTTACAACGAGTACATTTTGTCTTCTTTCTTCAAGCCAATATGTTACTCATGTTGGCATACATATGGGGTAGCCACAATACTGTGGTTACTTTGTGAATGGACAAGATTACTTACTGTATGACTTATATTGATGTATTGCATTTATTGCTTGTCTTATTCAGTACAGTGACCTTGCTGAAGCAGACCGTGCACTGGTTTTAGAGACATTTCGGCAAACAACATCGAGGTGGAGCCAAAAGCTCAGTTCTCTATCAGATGACAAATGTGAGGTTGAGGAAGATGGGGAAAAATCTCACATGATTGTAGTAACAGACGCTTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTCTGCCCATGTTTTGATAAATTATGAGCTACCAACAAAGAAGGTTTAGTTTTCAGACTTCAGGATTATATGAGCTGATAATTTGTAAAATCTGTATTAGAACTTGAGTGTGTTTATTTCAAAATCACTTCTGTCATGATTCAAAATCAACTTAGTATTTAATTTACCCTTTTAAACACGATTTTTATTCCATATAAATTGATTTTGAATAATTAAAAACATGTTTGGGAGTGATTTTGAATATAACAAAAGTGATTTTAACCATCTCAAAATCACTTTCAAAATGCCATATATCAATGATGCTTCACTTTCGTTTTTGTCCTAAATATTACTGAATTTCTTATCCTCTTTGTATTGCTTCTAATGTGCATCTGAAATCATTATTCGACCATTCAAAACGGGTAGTTGTAGGTATGAGTTTCGAACTTAGATTTCTATTAATAAGTTGCATGATTGTACAACTCTTCCTATTGCTTTATGTGTTACTGGTCTTTCTTAAAAACAATCTCATAGCAGAATTGGATATTAAAAAACTTGCATGAAGTTTGTTCATAACTTCATACGGTGATTTTCATTGCAGGAAACGTATATGAGGCGCATGACTACCTGCTCGGCCTCAGGTTATTCTTCTATACTGCAATGGATTATGATATAAGCTGCAGGGATTATGTTAATCTTCATGCATACTTCCTTTGCATTTATATCCAGATGGGATCTTAATCAACATGGTTGTTGGGGGAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCCGAGATGCCCATTAACGTAAGTTTGTTACTTGCTTTGATCTTCACGTGTTTTAGATGGATAAATTTTTTGCTAAGGATATCAGTTTCCCAAATAATTGATCCTGAATATTACTAAACAAAAAAAAGTCAAATCACAGTACTGCTTCTGTGTTTTATACAACTGCTGAAGTTGGAAAGAGACCGTATTGCAGATTTCTGAAATTTTATGAGAATGCATATGAAGACAACACAGAAGGTTCGCTTGTAGAGATTGTCTGTTCGACCACAACGATCTTGAATTGTGTCATCTGATCAACGAAGTTGATCATATCAATGATGTCTTATGTTTTCAGATCATTCCTGGTTAAATTGTAAGAACAAAATTTGTAATTTAACATTTTAGTTGCTACTTTCTTTTTGAAATGTTATATATCATAAATTCGGTTTAAATTAACCAACGCCTTCTCAAAAGAAAAGAAGCATGGCTTTTTAGCGAGAGGAAAAACTTAGGTTGTGAAGTAGTATTGGATCTTCTTGTTTCCTTCACGAATGGGGTTCGAAGAAAACAGGACCCAACCGATCGGAAGACATAATGGGTAGGGGACATGCACGCTCACCTCGTGAAGTTGCATAGTAGTATTTAAGGAACATATACTTTATTTTATTTGAGTTCGTGAGAGAAAAATTGCAACAATTGCAACTTTTGTAAGGACGATATATTTAATATATATAGACGTGATCATAAATGATATGTTCGAATAATTGACTTCATTTTATGCAAATTCTGAACAATGAAAATAAGTATTGTTAAATTTCATTTCTTTTAGAAAATGGTACGTATGGTAT

mRNA sequence

ATTTTATTTTAACTCAGTAGTCACAAGGCAGAAGAGAAGCACGTGAGGTTTGTGTTCAGGAAAGACCTCAGCCCTCGAACTTGGGAGCAGGCAGGTGAGAGCGCTGTGCAGCGGTGCAGCGACCATGGCAATTGATGGAATTGAAGCCTTCTCGCCTCCCTCTCACCCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTCGACAGGCTCCAGTTCAAGATGGAAACATTAGTGGGTTTGTTGGACGTAGCCGGTCGCCGTCCGTCCTTGCCGATGATTGTGTGTTGTAGTTCTCGCGACGAGCTCGATGCTGTCTGCTCCGCTGTCTCCAACCTCCAATACATCTCTTTGGCATCTTTGTACAGTGACCTTGCTGAAGCAGACCGTGCACTGGTTTTAGAGACATTTCGGCAAACAACATCGAGGTGGAGCCAAAAGCTCAGTTCTCTATCAGATGACAAATGTGAGGTTGAGGAAGATGGGGAAAAATCTCACATGATTGTAGTAACAGACGCTTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTCTGCCCATGTTTTGATAAATTATGAGCTACCAACAAAGAAGGAAACGTATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTAATCAACATGGTTGTTGGGGGAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCCGAGATGCCCATTAACTACTGCTTCTGTGTTTTATACAACTGCTGAAGTTGGAAAGAGACCGTATTGCAGATTTCTGAAATTTTATGAGAATGCATATGAAGACAACACAGAAGGTTCGCTTGTAGAGATTGTCTGTTCGACCACAACGATCTTGAATTGTGTCATCTGATCAACGAAGTTGATCATATCAATGATGTCTTATGTTTTCAGATCATTCCTGGTTAAATTGTAAGAACAAAATTTGTAATTTAACATTTTAGTTGCTACTTTCTTTTTGAAATGTTATATATCATAAATTCGGTTTAAATTAACCAACGCCTTCTCAAAAGAAAAGAAGCATGGCTTTTTAGCGAGAGGAAAAACTTAGGTTGTGAAGTAGTATTGGATCTTCTTGTTTCCTTCACGAATGGGGTTCGAAGAAAACAGGACCCAACCGATCGGAAGACATAATGGGTAGGGGACATGCACGCTCACCTCGTGAAGTTGCATAGTAGTATTTAAGGAACATATACTTTATTTTATTTGAGTTCGTGAGAGAAAAATTGCAACAATTGCAACTTTTGTAAGGACGATATATTTAATATATATAGACGTGATCATAAATGATATGTTCGAATAATTGACTTCATTTTATGCAAATTCTGAACAATGAAAATAAGTATTGTTAAATTTCATTTCTTTTAGAAAATGGTACGTATGGTAT

Coding sequence (CDS)

ATGGCAATTGATGGAATTGAAGCCTTCTCGCCTCCCTCTCACCCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTCGACAGGCTCCAGTTCAAGATGGAAACATTAGTGGGTTTGTTGGACGTAGCCGGTCGCCGTCCGTCCTTGCCGATGATTGTGTGTTGTAGTTCTCGCGACGAGCTCGATGCTGTCTGCTCCGCTGTCTCCAACCTCCAATACATCTCTTTGGCATCTTTGTACAGTGACCTTGCTGAAGCAGACCGTGCACTGGTTTTAGAGACATTTCGGCAAACAACATCGAGGTGGAGCCAAAAGCTCAGTTCTCTATCAGATGACAAATGTGAGGTTGAGGAAGATGGGGAAAAATCTCACATGATTGTAGTAACAGACGCTTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTCTGCCCATGTTTTGATAAATTATGAGCTACCAACAAAGAAGGAAACGTATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTAATCAACATGGTTGTTGGGGGAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCCGAGATGCCCATTAACTACTGCTTCTGTGTTTTATACAACTGCTGA

Protein sequence

MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINYCFCVLYNC

Homology

[Close]

BLAST of Carg05223 vs. NCBI nr
Match: KAG7027063.1 (Eukaryotic initiation factor 4A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPINYCFCVLYNC 216
           VVGGEVVTLKSIEESSGLVIAEMPINYCFCVLYNC
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPINYCFCVLYNC 215

[Close]

BLAST of Carg05223 vs. NCBI nr
Match: KAG6595040.1 (Eukaryotic initiation factor 4A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEESSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. NCBI nr
Match: XP_022963372.1 (eukaryotic initiation factor 4A-I isoform X2 [Cucurbita moschata])

HSP 1 Score: 402.1 bits (1032), Expect = 2.9e-108
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELDAVCSAVSNLQYISLASLYSDLAEADRAL+LETFRQTTSRWSQKL+SLSDDKCEVE
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEESSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. NCBI nr
Match: XP_023003701.1 (eukaryotic initiation factor 4A-I isoform X2 [Cucurbita maxima])

HSP 1 Score: 401.7 bits (1031), Expect = 3.9e-108
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDGIEAFSPPSHPSSHFS QRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSHQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEESSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. NCBI nr
Match: XP_023518711.1 (eukaryotic initiation factor 4A-I isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.3 bits (1022), Expect = 4.3e-107
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELDAVCSAVSNLQYISLASLYSDLAEADRAL+LETF QTTSRWSQKLSSLSDDKCEVE
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFPQTTSRWSQKLSSLSDDKCEVE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKE YMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKEMYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEESSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. ExPASy Swiss-Prot
Match: O02494 (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum OX=5807 GN=EIF4-A PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-11
Identity = 49/185 (26.49%), Postives = 87/185 (47.03%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           R FYV V++ ++KM+TL+ L +       +  I+ C++R  +D +   +    + + +S+
Sbjct: 245 RQFYVGVEKDEWKMDTLIDLYETL---TIVQAIIYCNTRRRVDQLTKQMRERDF-TCSSM 304

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           + D+ + DR +++  FR  +SR                       +++ TD    LLA G
Sbjct: 305 HGDMDQKDREVIMRQFRSGSSR-----------------------VLITTD----LLARG 364

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++INY+LP   ETY+ R+         G+ IN V   ++V L+ IE      I
Sbjct: 365 IDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNTQI 398

Query: 203 AEMPI 206
            EMP+
Sbjct: 425 EEMPM 398

[Close]

BLAST of Carg05223 vs. ExPASy Swiss-Prot
Match: Q4P331 (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=TIF1 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 46/186 (24.73%), Postives = 92/186 (49.46%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           + FYVAV++  +K++TL  L +          ++ C++R ++D +   +++ ++ +++++
Sbjct: 252 KQFYVAVEKEDWKLDTLCDLYETV---TITQAVIFCNTRRKVDWLTDKLTSREF-TVSAM 311

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           + D+ +A R +++  FR  +SR                       +++ TD    LLA G
Sbjct: 312 HGDMEQAQREVIMREFRSGSSR-----------------------VLITTD----LLARG 371

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++INY+LP+ +E Y+ R+         G+ IN V   +V  L+ IE+     I
Sbjct: 372 IDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDIEQFYSTQI 406

Query: 203 AEMPIN 207
            EMP+N
Sbjct: 432 DEMPLN 406

[Close]

BLAST of Carg05223 vs. ExPASy Swiss-Prot
Match: Q6FQQ6 (ATP-dependent RNA helicase eIF4A OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=TIF1 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.6e-10
Identity = 48/184 (26.09%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           + FYV V+  QFK + L  L D      +   ++ C++R +++ +   ++     +++S+
Sbjct: 236 KQFYVNVEEEQFKYDCLTDLYDSISVTQA---VIFCNTRRKVEELTQRLT-ADNFTVSSI 295

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           YSDL + +R  +++ FR  +SR                       +++ TD    LLA G
Sbjct: 296 YSDLPQQERDTIMKEFRSGSSR-----------------------ILISTD----LLARG 355

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++INY+LPT KE Y+ R+         G+ IN +V  +V  L+ +E+     I
Sbjct: 356 IDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALRELEQFYSTQI 388

Query: 203 AEMP 205
            E+P
Sbjct: 416 EELP 388

[Close]

BLAST of Carg05223 vs. ExPASy Swiss-Prot
Match: A4QVP2 (ATP-dependent RNA helicase eIF4A OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=TIF1 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 45/186 (24.19%), Postives = 91/186 (48.92%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + +++++
Sbjct: 237 KQFYIAVEKEEWKLDTLSDLYETV---TITQAVIFCNTRRKVDWLTDKLTARDF-TVSAM 296

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           + D+ +A R L+++ FR  +SR                       +++ TD    LLA G
Sbjct: 297 HGDMDQAQRDLIMKEFRSGSSR-----------------------VLIATD----LLARG 356

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++INY+LP  +E Y+ R+         G+ IN V   +V  ++ IE+     I
Sbjct: 357 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQI 391

Query: 203 AEMPIN 207
            EMP+N
Sbjct: 417 EEMPMN 391

[Close]

BLAST of Carg05223 vs. ExPASy Swiss-Prot
Match: Q7RV88 (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tif-1 PE=3 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 45/186 (24.19%), Postives = 91/186 (48.92%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + +++++
Sbjct: 238 KQFYIAVEKEEWKLDTLSDLYETV---TITQAVIFCNTRRKVDWLTDKLTARDF-TVSAM 297

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           + D+ +A R L+++ FR  +SR                       +++ TD    LLA G
Sbjct: 298 HGDMDQAQRDLIMKEFRSGSSR-----------------------VLIATD----LLARG 357

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++INY+LP  +E Y+ R+         G+ IN V   +V  ++ IE+     I
Sbjct: 358 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQI 392

Query: 203 AEMPIN 207
            EMP+N
Sbjct: 418 EEMPMN 392

[Close]

BLAST of Carg05223 vs. ExPASy TrEMBL
Match: A0A6J1HF44 (eukaryotic initiation factor 4A-I isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463598 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELDAVCSAVSNLQYISLASLYSDLAEADRAL+LETFRQTTSRWSQKL+SLSDDKCEVE
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEESSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. ExPASy TrEMBL
Match: A0A6J1KPZ3 (eukaryotic initiation factor 4A-I isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497212 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDGIEAFSPPSHPSSHFS QRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSHQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEESSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. ExPASy TrEMBL
Match: A0A5D3CLW0 (ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004870 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.9e-102
Identity = 193/206 (93.69%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAID IEAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELD+VCSAVSNLQYISLASLYSDLAEADRAL+LE FRQTTSRWSQK SSLS++KCE E
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           + GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKETYMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEE+SGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. ExPASy TrEMBL
Match: A0A1S3B0P7 (eukaryotic initiation factor 4A-I isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484771 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.9e-101
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAID IEAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELD+VCSAVSNLQYISLASLYSDLAEADRAL+LE FRQTTSRWSQK SSLS++KCE E
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           + GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKE YMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKEIYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEE+SGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. ExPASy TrEMBL
Match: A0A1S3B1C4 (ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484771 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.9e-101
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAID IEAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVE 120
           RDELD+VCSAVSNLQYISLASLYSDLAEADRAL+LE FRQTTSRWSQK SSLS++KCE E
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180
           + GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKE YMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKEIYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEESSGLVIAEMPIN 207
           VVGGEVVTLKSIEE+SGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 206

[Close]

BLAST of Carg05223 vs. TAIR 10
Match: AT4G37020.1 (BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 272.3 bits (695), Expect = 3.3e-73
Identity = 140/207 (67.63%), Postives = 170/207 (82.13%), Query Frame = 0


Query: 3   IDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRD 62
           +D +EA S P    S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRD
Sbjct: 1   MDSMEAPSLPFQSPSRSSQQLHFYLAVDRPQFKMETVVELLGVLGRRPWLPIVVCCSSRD 60

Query: 63  ELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEED 122
           ELDAVCS++S L YISLA+LYSDLA+ +RA+V+E FRQ T  W+Q+L+S+ ++  E  E+
Sbjct: 61  ELDAVCSSLSTLPYISLAALYSDLADRERAMVIEKFRQATINWNQQLNSVVEEGLEESEN 120

Query: 123 GEK---SHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILIN 182
           G++   SH++VVTD CLPLL+SGES LSA VLINYELPTKKETY RR+TTC AS GI+IN
Sbjct: 121 GKEEKTSHLVVVTDVCLPLLSSGESSLSARVLINYELPTKKETYTRRITTCLASGGIVIN 180

Query: 183 MVVGGEVVTLKSIEESSGLVIAEMPIN 207
           MVVGGEV TLKS+EESSG++IAEMPIN
Sbjct: 181 MVVGGEVTTLKSLEESSGILIAEMPIN 207

[Close]

BLAST of Carg05223 vs. TAIR 10
Match: AT4G37020.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1). )

HSP 1 Score: 272.3 bits (695), Expect = 3.3e-73
Identity = 140/207 (67.63%), Postives = 170/207 (82.13%), Query Frame = 0


Query: 3   IDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRD 62
           +D +EA S P    S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRD
Sbjct: 1   MDSMEAPSLPFQSPSRSSQQLHFYLAVDRPQFKMETVVELLGVLGRRPWLPIVVCCSSRD 60

Query: 63  ELDAVCSAVSNLQYISLASLYSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEED 122
           ELDAVCS++S L YISLA+LYSDLA+ +RA+V+E FRQ T  W+Q+L+S+ ++  E  E+
Sbjct: 61  ELDAVCSSLSTLPYISLAALYSDLADRERAMVIEKFRQATINWNQQLNSVVEEGLEESEN 120

Query: 123 GEK---SHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILIN 182
           G++   SH++VVTD CLPLL+SGES LSA VLINYELPTKKETY RR+TTC AS GI+IN
Sbjct: 121 GKEEKTSHLVVVTDVCLPLLSSGESSLSARVLINYELPTKKETYTRRITTCLASGGIVIN 180

Query: 183 MVVGGEVVTLKSIEESSGLVIAEMPIN 207
           MVVGGEV TLKS+EESSG++IAEMPIN
Sbjct: 181 MVVGGEVTTLKSLEESSGILIAEMPIN 207

[Close]

BLAST of Carg05223 vs. TAIR 10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 41/186 (22.04%), Postives = 86/186 (46.24%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           + FYV VD+ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ 
Sbjct: 255 KQFYVNVDKEEWKLETLCDLYETLAITQS---VIFVNTRRKVDWLTDKMRSRDH-TVSAT 314

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           + D+ +  R +++  FR  +SR                       +++ TD    LLA G
Sbjct: 315 HGDMDQNTRDIIMREFRSGSSR-----------------------VLITTD----LLARG 374

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++IN++LPT+ E Y+ R+         G+ IN +   +   +  I+    +V+
Sbjct: 375 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVV 409

Query: 203 AEMPIN 207
            E+P N
Sbjct: 435 EELPSN 409

[Close]

BLAST of Carg05223 vs. TAIR 10
Match: AT3G13920.1 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 42/186 (22.58%), Postives = 87/186 (46.77%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ 
Sbjct: 253 KQFYVNVEKEEWKLETLCDLYETLAITQS---VIFVNTRRKVDWLTDKMRSRDH-TVSAT 312

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           + D+ +  R +++  FR  +SR                       +++ TD    LLA G
Sbjct: 313 HGDMDQNTRDIIMREFRSGSSR-----------------------VLITTD----LLARG 372

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++IN++LPT+ E Y+ R+         G+ IN V   +   L  I++   +V+
Sbjct: 373 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVV 407

Query: 203 AEMPIN 207
            E+P N
Sbjct: 433 EELPSN 407

[Close]

BLAST of Carg05223 vs. TAIR 10
Match: AT3G13920.3 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 42/186 (22.58%), Postives = 87/186 (46.77%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASL 82
           + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ 
Sbjct: 243 KQFYVNVEKEEWKLETLCDLYETLAITQS---VIFVNTRRKVDWLTDKMRSRDH-TVSAT 302

Query: 83  YSDLAEADRALVLETFRQTTSRWSQKLSSLSDDKCEVEEDGEKSHMIVVTDACLPLLASG 142
           + D+ +  R +++  FR  +SR                       +++ TD    LLA G
Sbjct: 303 HGDMDQNTRDIIMREFRSGSSR-----------------------VLITTD----LLARG 362

Query: 143 ESPLSAHVLINYELPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVI 202
                  ++IN++LPT+ E Y+ R+         G+ IN V   +   L  I++   +V+
Sbjct: 363 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVV 397

Query: 203 AEMPIN 207
            E+P N
Sbjct: 423 EELPSN 397

The following BLAST results are available for this feature:

BLAST of Carg05223 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027063.1	1.9e-115	100.00	Eukaryotic initiation factor 4A [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6595040.1	1.0e-108	100.00	Eukaryotic initiation factor 4A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022963372.1	2.9e-108	99.03	eukaryotic initiation factor 4A-I isoform X2 [Cucurbita moschata]	[more]
XP_023003701.1	3.9e-108	99.51	eukaryotic initiation factor 4A-I isoform X2 [Cucurbita maxima]	[more]
XP_023518711.1	4.3e-107	98.54	eukaryotic initiation factor 4A-I isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg05223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02494	3.5e-11	26.49	Eukaryotic initiation factor 4A OS=Cryptosporidium parvum OX=5807 GN=EIF4-A PE=2...	[more]
Q4P331	2.3e-10	24.73	ATP-dependent RNA helicase eIF4A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=...	[more]
Q6FQQ6	8.6e-10	26.09	ATP-dependent RNA helicase eIF4A OS=Candida glabrata (strain ATCC 2001 / CBS 138...	[more]
A4QVP2	1.1e-09	24.19	ATP-dependent RNA helicase eIF4A OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-...	[more]
Q7RV88	1.1e-09	24.19	ATP-dependent RNA helicase eIF4A OS=Neurospora crassa (strain ATCC 24698 / 74-OR...	[more]

BLAST of Carg05223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF44	1.4e-108	99.03	eukaryotic initiation factor 4A-I isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KPZ3	1.9e-108	99.51	eukaryotic initiation factor 4A-I isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5D3CLW0	9.9e-102	93.69	ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B0P7	4.9e-101	93.20	eukaryotic initiation factor 4A-I isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A1S3B1C4	4.9e-101	93.20	ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034847...	[more]

BLAST of Carg05223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37020.1	3.3e-73	67.63	BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III ...	[more]
AT4G37020.2	3.3e-73	67.63	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G72730.1	1.8e-07	22.04	DEA(D/H)-box RNA helicase family protein	[more]
AT3G13920.1	2.4e-07	22.58	eukaryotic translation initiation factor 4A1	[more]
AT3G13920.3	2.4e-07	22.58	eukaryotic translation initiation factor 4A1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 17..208 e-value: 1.4E-11 score: 45.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 22..205
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 3..207
None	No IPR available	PANTHER	PTHR24031:SF359	INITIATION FACTOR 4A-LIKE PROTEIN	coord: 3..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05223-RA	Carg05223-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003743	translation initiation factor activity