Carg05154 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg05154
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr07: 3213469 .. 3214802 (+)
RNA-Seq ExpressionCarg05154
SyntenyCarg05154
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCATGTCACGCATTGGCTAATAATAATATGAGTGCCACACCACACCATCCATATCCAAATCTCCAGTGATATATGTGATCCCCAACGACAAATGCCCAAACAGAGCTCACTCTTCCTTCAACAATGGCCGCCAAATTCCCTCTTTCTTCTTCCCTTACCACCATCAAATTCTCACTCCAACAGAACCCATCTCCCTTCTTCGCTCCTCTTCCCTGCACCACCTTCTCGCCGCCGCAGCCAAGGCCAACGCCAAGGGCTTCTCAGTTCAAACTTCTTGCAAATTCAGGTGAAGGCCCCTTCTACTTTCGCTTGGATCTGCAGCTCACTCTTGCTGTTTTTCAGCTGCTGATGTTGTTTTTCAGGTGGTGGCGACGCCGAGGTCAAGAAGGGAGGGAAGAAGAAGTTCATAACCAAAGAACAAGAGCCAGAGCAGTAAGCAATTCTTTCCCTTTTCTGTATCAATTTGTATAGCCCACTGCTAGCTTTCCCTTTCGGGTTTCTCCCAAGGTTTTGAAATCGACGTGGGATTTCACAAGTCGTTTTTCAAGTAGAAGAAGATATCATCAGGGCTTTAAGATGGAAATGTGGTTGAATTTGGTGCAGGTATTGGCAGACAGCAGGGGAGAGGGAAGGGGAAAATCCCATGAAGACTCCTCTTCCTTATATCATCATCTTCGGCATGTCGACGCCTTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAAGTACCTGTGAGATGAATCTGATCAACCATGACAGTAACCTGATATCCTCTGCTGCTTCTCTACAGCCCACCAAAAACCCACTGTTTATGCCTATTTTGAGTTGTAATGTTCTTCCAGAATCTAATACAAATTGTTGTAACTCAGTTCGATTTTGTTGTTGGTCTGTCAGCTCATATGAGTTTGGATTCTATTCCATTCCCATTTCAATACACCAAGCTGTTTTCTCGATCCTGTTGGAGCAAGAACTGTTGTGCCTCTGCAGAATGTTTGAGATATTAATTTCACGAAGACATAAACATTTAAACGAAGATACGCATATAACTCGAAACTCGAGTAATTTACAGGAGGCAATGAAAGTAAAAGTAATAGAGTTTACATGTCCAAAACCAGGCAGTGCTCACGTTGTCAATACCTCTCTCACGTGTAACGACGGGTAGAGAGTCTCATCTCTTTCCTCAAAGTCATCTTTAAGGCAAGCTGCATTTAGGTACATGTGTCAGTCCGTGGAAGAGGGGAAGAGTGAAAGGGTAACCACTACTAAGGATCTCCCCCCTAATCTTAGATAGGTCCTCTAAGGGTTCACCGTAGTTCGTTGTTGT

mRNA sequence

CGTCATGTCACGCATTGGCTAATAATAATATGAGTGCCACACCACACCATCCATATCCAAATCTCCAGTGATATATGTGATCCCCAACGACAAATGCCCAAACAGAGCTCACTCTTCCTTCAACAATGGCCGCCAAATTCCCTCTTTCTTCTTCCCTTACCACCATCAAATTCTCACTCCAACAGAACCCATCTCCCTTCTTCGCTCCTCTTCCCTGCACCACCTTCTCGCCGCCGCAGCCAAGGCCAACGCCAAGGGCTTCTCAGTTCAAACTTCTTGCAAATTCAGGTGGTGGCGACGCCGAGGTCAAGAAGGGAGGGAAGAAGAAGTATTGGCAGACAGCAGGGGAGAGGGAAGGGGAAAATCCCATGAAGACTCCTCTTCCTTATATCATCATCTTCGGCATGTCGACGCCTTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAAGTACCTGTGAGATGAATCTGATCAACCATGACAGTAACCTGATATCCTCTGCTGCTTCTCTACAGCCCACCAAAAACCCACTGTTTATGCCTATTTTGAGTTGTAATGTTCTTCCAGAATCTAATACAAATTGTTGTAACTCAGTTCGATTTTGTTGTTGGTCTGTCAGCTCATATGAGTTTGGATTCTATTCCATTCCCATTTCAATACACCAAGCTGTTTTCTCGATCCTGTTGGAGCAAGAACTGTTGTGCCTCTGCAGAATGTTTGAGATATTAATTTCACGAAGACATAAACATTTAAACGAAGATACGCATATAACTCGAAACTCGAGTAATTTACAGGAGGCAATGAAAGTAAAAGTAATAGAGTTTACATGTCCAAAACCAGGCAGTGCTCACGTTGTCAATACCTCTCTCACGTGTAACGACGGGTAGAGAGTCTCATCTCTTTCCTCAAAGTCATCTTTAAGGCAAGCTGCATTTAGGTACATGTGTCAGTCCGTGGAAGAGGGGAAGAGTGAAAGGGTAACCACTACTAAGGATCTCCCCCCTAATCTTAGATAGGTCCTCTAAGGGTTCACCGTAGTTCGTTGTTGT

Coding sequence (CDS)

ATGGCCGCCAAATTCCCTCTTTCTTCTTCCCTTACCACCATCAAATTCTCACTCCAACAGAACCCATCTCCCTTCTTCGCTCCTCTTCCCTGCACCACCTTCTCGCCGCCGCAGCCAAGGCCAACGCCAAGGGCTTCTCAGTTCAAACTTCTTGCAAATTCAGGTGGTGGCGACGCCGAGGTCAAGAAGGGAGGGAAGAAGAAGTATTGGCAGACAGCAGGGGAGAGGGAAGGGGAAAATCCCATGAAGACTCCTCTTCCTTATATCATCATCTTCGGCATGTCGACGCCTTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAAGTACCTGTGAGATGA

Protein sequence

MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAEVKKGGKKKYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR
Homology
[Close]
BLAST of Carg05154 vs. NCBI nr
Match: KAG7026995.1 (hypothetical protein SDJN02_11003 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.4 bits (594), Expect = 9.7e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60
           MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60

Query: 61  VKKGGKKKYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR 116
           VKKGGKKKYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR
Sbjct: 61  VKKGGKKKYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR 115

[Close]
BLAST of Carg05154 vs. NCBI nr
Match: XP_022947537.1 (uncharacterized protein LOC111451373 [Cucurbita moschata] >KAG6604915.1 hypothetical protein SDJN03_02232, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 115/125 (92.00%), Postives = 115/125 (92.00%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60
           MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60

Query: 61  VKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 116
           VKKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
Sbjct: 61  VKKGGKKKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120

[Close]
BLAST of Carg05154 vs. NCBI nr
Match: XP_023534591.1 (uncharacterized protein LOC111796124 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 114/125 (91.20%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60
           MAAKFPLSSSLTTIKF LQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFPLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60

Query: 61  VKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 116
           VKKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
Sbjct: 61  VKKGGKKKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120

[Close]
BLAST of Carg05154 vs. NCBI nr
Match: XP_022971133.1 (uncharacterized protein LOC111469898 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 109/125 (87.20%), Postives = 111/125 (88.80%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60
           MAAKFPLSSSLTTIKF LQQNPSPFF PLPCTTFSPP+P+  PRASQFKLLANSGGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFPLQQNPSPFFPPLPCTTFSPPKPK--PRASQFKLLANSGGGDAE 60

Query: 61  VKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 116
           VKKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
Sbjct: 61  VKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120

[Close]
BLAST of Carg05154 vs. NCBI nr
Match: XP_004140001.1 (uncharacterized protein LOC101219556 [Cucumis sativus] >KGN46605.1 hypothetical protein Csa_005653 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 4.1e-40
Identity = 100/126 (79.37%), Postives = 105/126 (83.33%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNP-SPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDA 60
           MAAKFPLSSSL TIKF LQQNP S FF PLP + FS P+ RPTP +S+FKLLAN GGGDA
Sbjct: 1   MAAKFPLSSSL-TIKFPLQQNPSSSFFPPLP-SPFSSPKLRPTP-SSRFKLLANLGGGDA 60

Query: 61  EVKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 116
           E+KKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW
Sbjct: 61  EIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 120

[Close]
BLAST of Carg05154 vs. ExPASy TrEMBL
Match: A0A6J1G6R0 (uncharacterized protein LOC111451373 OS=Cucurbita moschata OX=3662 GN=LOC111451373 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 115/125 (92.00%), Postives = 115/125 (92.00%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60
           MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60

Query: 61  VKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 116
           VKKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
Sbjct: 61  VKKGGKKKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120

[Close]
BLAST of Carg05154 vs. ExPASy TrEMBL
Match: A0A6J1I5Y3 (uncharacterized protein LOC111469898 OS=Cucurbita maxima OX=3661 GN=LOC111469898 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.3e-51
Identity = 109/125 (87.20%), Postives = 111/125 (88.80%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60
           MAAKFPLSSSLTTIKF LQQNPSPFF PLPCTTFSPP+P+  PRASQFKLLANSGGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFPLQQNPSPFFPPLPCTTFSPPKPK--PRASQFKLLANSGGGDAE 60

Query: 61  VKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 116
           VKKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
Sbjct: 61  VKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120

[Close]
BLAST of Carg05154 vs. ExPASy TrEMBL
Match: A0A0A0KA68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112440 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.0e-40
Identity = 100/126 (79.37%), Postives = 105/126 (83.33%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNP-SPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDA 60
           MAAKFPLSSSL TIKF LQQNP S FF PLP + FS P+ RPTP +S+FKLLAN GGGDA
Sbjct: 1   MAAKFPLSSSL-TIKFPLQQNPSSSFFPPLP-SPFSSPKLRPTP-SSRFKLLANLGGGDA 60

Query: 61  EVKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 116
           E+KKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW
Sbjct: 61  EIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 120

[Close]
BLAST of Carg05154 vs. ExPASy TrEMBL
Match: A0A5D3CJG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001450 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.6e-40
Identity = 99/126 (78.57%), Postives = 105/126 (83.33%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNP-SPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDA 60
           MAAKFPLSSSL T+KF LQQNP S FF PLP + FS P+ RPTP +S+FKLLAN GGGDA
Sbjct: 45  MAAKFPLSSSL-TVKFPLQQNPSSSFFPPLP-SPFSSPKLRPTP-SSRFKLLANLGGGDA 104

Query: 61  EVKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 116
           E+KKGGKKK          YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW
Sbjct: 105 EIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 164

[Close]
BLAST of Carg05154 vs. ExPASy TrEMBL
Match: A0A6J1CI22 (uncharacterized protein LOC111011130 OS=Momordica charantia OX=3673 GN=LOC111011130 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.6e-40
Identity = 96/126 (76.19%), Postives = 102/126 (80.95%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPSPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDAE 60
           MAAKF LSSSL TIKF LQQNPS FFAPLP +  S P P+P  RAS+FKL+AN GGGDAE
Sbjct: 1   MAAKFALSSSL-TIKFPLQQNPSSFFAPLP-SGLSSPNPKPKSRASRFKLVANLGGGDAE 60

Query: 61  VKKGGKKK-----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 116
           +KKGG KK           YWQ+AGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW
Sbjct: 61  IKKGGGKKKFITKEEEPEQYWQSAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 120

[Close]
BLAST of Carg05154 vs. TAIR 10
Match: AT4G13500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 7.2e-27
Identity = 74/129 (57.36%), Postives = 81/129 (62.79%), Query Frame = 0 

Query: 1   MAAKFPLSSSLTTIKFSLQQNPS----PFFAPLPCTTFSPPQPRPTPRASQFKLLANSGG 60
           MAAKF +SSS  + + S     S         LP   F PP P   P   +FKL A  GG
Sbjct: 1   MAAKFRISSSSFSHRASDSSTSSSSSYSSLLALP-QFFCPPSPLGFP---EFKLHAKLGG 60

Query: 61  GDAEVKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFA 116
           GD EVK   KKK          YWQ+ GEREGENPMKTPLPYIIIFGMSTPFVILAIAFA
Sbjct: 61  GDGEVKPKDKKKFITKEEEPEQYWQSVGEREGENPMKTPLPYIIIFGMSTPFVILAIAFA 120

[Close]
BLAST of Carg05154 vs. TAIR 10
Match: AT2G05310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26
Identity = 73/128 (57.03%), Postives = 80/128 (62.50%), Query Frame = 0 

Query: 1   MAAK--FPLSSSLTTIKFSLQQNPSPFFAPLPCTT-FSPPQPRPTPRASQFKLLANSGGG 60
           MAAK   P SS       S+  + S + + L     F PP P   P   QFKL A  GGG
Sbjct: 1   MAAKLCIPSSSFSHRTNDSITSSSSSYSSLLALPQFFCPPSPLGFP---QFKLHAKLGGG 60

Query: 61  DAEVKKGGKKK----------YWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFAN 116
           D EVK   KKK          YWQ+ GEREGENPMKTPLPYIIIFGMSTPFVILAIAFAN
Sbjct: 61  DGEVKPKDKKKFITKDEEPEQYWQSVGEREGENPMKTPLPYIIIFGMSTPFVILAIAFAN 120

The following BLAST results are available for this feature:
BLAST of Carg05154 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026995.19.7e-58100.00hypothetical protein SDJN02_11003 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022947537.12.6e-5592.00uncharacterized protein LOC111451373 [Cucurbita moschata] >KAG6604915.1 hypothet... [more]
XP_023534591.11.0e-5491.20uncharacterized protein LOC111796124 [Cucurbita pepo subsp. pepo][more]
XP_022971133.11.5e-5087.20uncharacterized protein LOC111469898 [Cucurbita maxima][more]
XP_004140001.14.1e-4079.37uncharacterized protein LOC101219556 [Cucumis sativus] >KGN46605.1 hypothetical ... [more]
BLAST of Carg05154 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg05154 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G6R01.3e-5592.00uncharacterized protein LOC111451373 OS=Cucurbita moschata OX=3662 GN=LOC1114513... [more]
A0A6J1I5Y37.3e-5187.20uncharacterized protein LOC111469898 OS=Cucurbita maxima OX=3661 GN=LOC111469898... [more]
A0A0A0KA682.0e-4079.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112440 PE=4 SV=1[more]
A0A5D3CJG82.6e-4078.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CI222.6e-4076.19uncharacterized protein LOC111011130 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
BLAST of Carg05154 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G13500.17.2e-2757.36unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G05310.11.6e-2657.03unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..74
NoneNo IPR availablePANTHERPTHR36343EXPRESSED PROTEINcoord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05154-RACarg05154-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane